HHsearch alignment for GI: 254781193 and conserved domain: PRK05168
>PRK05168 ribonuclease T; Provisional.
Probab=98.88 E-value=9.4e-08 Score=68.61 Aligned_cols=81 Identities=22% Similarity=0.144 Sum_probs=57.0
Q ss_pred CEEEEEEHHHHHHHHHHH---CCCCC-C--CCCEEEHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 819997307749999986---08998-8--42033168899986789996898998299811004379999862021123
Q gi|254781193|r 66 VTIVAHNSYFERTVLKAC---FNLDI-P--IHRWICTLVLARSNGLPSALKAVGEALKLSSQKMEEGKELIARFCKGETH 139 (675)
Q Consensus 66 ~~kV~HNa~FD~~~L~~~---~Gi~i-~--~~~~~DTmi~A~~l~~~~sL~~la~~l~l~~~k~~~~k~l~~~~~k~~~~ 139 (675)
T Consensus 115 avLVaHNA~FD~~FLn~~~~r~g~~~~P~~~~~viDTl~Lar~~~~~~~L~~lc~~~gi~~~~~---------------- 178 (213)
T PRK05168 115 AILVAHNAHFDLGFLNAAAERTGLKRNPFHPFSTFDTATLAGLAYGQTVLAKACQAAGIEFDNK---------------- 178 (213)
T ss_pred CEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHHCCCCCCCC----------------
T ss_conf 6377634187499999999984997788887763358998688748740999999869999997----------------
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf 4332346785853289999998998999999996301040
Q gi|254781193|r 140 ECLYDRNKPNHREAWRLFGEYCKGDVTVTREIFKRLEPLS 179 (675)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~Ya~~Dv~~t~~L~~~l~~~~ 179 (675)
T Consensus 179 --------~---------~HrAl~DA~~tA~vFl~ll~~l 201 (213)
T PRK05168 179 --------E---------AHSALYDTEKTAELFCEIVNRW 201 (213)
T ss_pred --------C---------CCCCHHHHHHHHHHHHHHHHHH
T ss_conf --------7---------7773899999999999999999