HHsearch alignment for GI: 254781193 and conserved domain: PRK07246
>PRK07246 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated.
Probab=99.24 E-value=4.8e-10 Score=83.44 Aligned_cols=106 Identities=15% Similarity=0.242 Sum_probs=69.0
Q ss_pred CEEEEEECCCCCCCCCCCCCHHHCCCCEEEEEEEE-ECCEEE-EEEE--CCCCHHH------------------------
Q ss_conf 68999814178987000440011279819999999-848039-9997--8881043------------------------
Q gi|254781193|r 2 ATLFIDFETRSPIDLTKCGICKYAEDVCVILFAFG-FDDHPV-ELWD--CVHDPVM------------------------ 53 (675)
Q Consensus 2 k~i~lD~ET~~~~dl~~~Gl~~y~~~~~i~~i~~a-~~~~~v-~~~d--~~~~~~~------------------------ 53 (675)
T Consensus 8 ~~~vvDlETTG--------~~~--~~-~Iiqi~~v~~~~~~i~~~f~t~vnP~~~ip~~I~~LTgI~~~~v~~ap~f~~v 76 (820)
T PRK07246 8 KYAVVDLEATG--------AGP--NA-SIIQVGIVIIQGNKIIDSYETDVNPHESLDEHIVHLTGITDKQLAQAPDFSQV 76 (820)
T ss_pred CEEEEEEECCC--------CCC--CC-CEEEEEEEEEECCEEEEEEEECCCCCCCCCHHHHHHCCCCHHHHHCCCCHHHH
T ss_conf 18999988789--------899--98-77999999999999989987311889979978886469898998529998999
Q ss_pred HHHHHHHHCCCCCEEEEEEHHHHHHHHHHHC---CCCCCCCCEEEHHHHHHHHCC---CCCHHHHHHHCCCCCC
Q ss_conf 7999998638898199973077499999860---899884203316889998678---9996898998299811
Q gi|254781193|r 54 PQVLKEALENTDVTIVAHNSYFERTVLKACF---NLDIPIHRWICTLVLARSNGL---PSALKAVGEALKLSSQ 121 (675)
Q Consensus 54 ~~~l~~~L~~~~~~kV~HNa~FD~~~L~~~~---Gi~i~~~~~~DTmi~A~~l~~---~~sL~~la~~l~l~~~ 121 (675)
T Consensus 77 ~~~~~~~l~--~~~~VaHNv~FD~~fl~~~~~~~g~~~~-~~~~DTv~La~i~~P~~~~y~L~~L~~~l~~~~~ 147 (820)
T PRK07246 77 AHHIYQLIE--DCIFVAHNVKFDANLLAEALFLEGYELR-TPRVDTVELAQVFFPRLEKYSLSHLSRQLNIDLA 147 (820)
T ss_pred HHHHHHHHC--CCEEEEECCCCCHHHHHHHHHHCCCCCC-CCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCC
T ss_conf 999999967--9859983720169999999997589889-9826099999997798788888999997399999