HHsearch alignment for GI: 254781193 and conserved domain: PRK07247

>PRK07247 DNA polymerase III subunit epsilon; Validated.
Probab=98.54  E-value=1.8e-06  Score=60.37  Aligned_cols=85  Identities=13%  Similarity=0.149  Sum_probs=56.2

Q ss_pred             HHHHHHHCCCCCEEEEEEH-HHHHHHHHHH---CCCCCCCCCEEEHHHHHHHHC----CCCCHHHHHHHCCCCCCHHHHH
Q ss_conf             9999986388981999730-7749999986---089988420331688999867----8999689899829981100437
Q gi|254781193|r   55 QVLKEALENTDVTIVAHNS-YFERTVLKAC---FNLDIPIHRWICTLVLARSNG----LPSALKAVGEALKLSSQKMEEG  126 (675)
Q Consensus        55 ~~l~~~L~~~~~~kV~HNa-~FD~~~L~~~---~Gi~i~~~~~~DTmi~A~~l~----~~~sL~~la~~l~l~~~k~~~~  126 (675)
T Consensus        76 ~~f~~Fig--d~~lVaHNa~~FD~~fL~~~~~~~~~~~~-~~~~~~~~~~r~~~~p~l~n~kL~tLa~~f~I~~~-----  147 (195)
T PRK07247         76 AAFKNFVG--ELPLIGYNAQKSDLPILAENGLDLRDQYQ-VDLFDEAFDRRSSDLNGIANLKLQTVATFLGIKGR-----  147 (195)
T ss_pred             HHHHHHHC--CCEEEEECCCHHHHHHHHHHHHHHCCCCC-CCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCC-----
T ss_conf             99999968--99189908845149999998774157766-85699999998860588767778999997499998-----


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             9999862021123433234678585328999999899899999999630104
Q gi|254781193|r  127 KELIARFCKGETHECLYDRNKPNHREAWRLFGEYCKGDVTVTREIFKRLEPL  178 (675)
Q Consensus       127 k~l~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~Ya~~Dv~~t~~L~~~l~~~  178 (675)
T Consensus       148 ----------------------~---------HRAl~DA~aTa~If~klLe~  168 (195)
T PRK07247        148 ----------------------G---------HNSLEDARMTARIYESFLET  168 (195)
T ss_pred             ----------------------C---------CCCHHHHHHHHHHHHHHHHH
T ss_conf             ----------------------9---------08189999999999999997