HHsearch alignment for GI: 254781193 and conserved domain: PRK07942

>PRK07942 DNA polymerase III subunit epsilon; Provisional.
Probab=99.08  E-value=6e-09  Score=76.31  Aligned_cols=80  Identities=19%  Similarity=0.165  Sum_probs=58.8

Q ss_pred             CCCEEEEEEHHHHHHHHHHH---CCCC-CCCCCEEEHHHHHHHHCC----CCCHHHHHHHCCCCCCHHHHHHHHHHHHCC
Q ss_conf             89819997307749999986---0899-884203316889998678----999689899829981100437999986202
Q gi|254781193|r   64 TDVTIVAHNSYFERTVLKAC---FNLD-IPIHRWICTLVLARSNGL----PSALKAVGEALKLSSQKMEEGKELIARFCK  135 (675)
Q Consensus        64 ~~~~kV~HNa~FD~~~L~~~---~Gi~-i~~~~~~DTmi~A~~l~~----~~sL~~la~~l~l~~~k~~~~k~l~~~~~k  135 (675)
T Consensus        92 ~g~~lVahNA~FDl~fL~~El~R~g~~~l~~~~viDtl~l~r~l~~~r~gkr~L~aL~~~ygv~l~~-------------  158 (234)
T PRK07942         92 AGVPVVVYNAPYDLTVLDRELRRHGLPSLVPGPVIDPYVIDKHVDRYRKGKRTLTALCEHYGVRLDN-------------  158 (234)
T ss_pred             CCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCC-------------
T ss_conf             7987999670764999999999859996777755619998877514777888899999984998877-------------


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             1123433234678585328999999899899999999630104
Q gi|254781193|r  136 GETHECLYDRNKPNHREAWRLFGEYCKGDVTVTREIFKRLEPL  178 (675)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~Ya~~Dv~~t~~L~~~l~~~  178 (675)
T Consensus       159 -------------aH---------~A~aDA~Ata~l~~~l~~r  179 (234)
T PRK07942        159 -------------AH---------DATADALAAARLAWALARR  179 (234)
T ss_pred             -------------CC---------CCHHHHHHHHHHHHHHHHH
T ss_conf             -------------55---------6415289999999999987