HHsearch alignment for GI: 254781193 and conserved domain: PRK08858
>PRK08858 consensus.
Probab=99.12 E-value=3.5e-09 Score=77.83 Aligned_cols=88 Identities=18% Similarity=0.169 Sum_probs=61.7
Q ss_pred HHHHHHHHCCCCCEEEEEEHHHHHHHHHHHC---CCCCC----CCCEEEHHHHHHHHCC--CCCHHHHHHHCCCCCCHHH
Q ss_conf 7999998638898199973077499999860---89988----4203316889998678--9996898998299811004
Q gi|254781193|r 54 PQVLKEALENTDVTIVAHNSYFERTVLKACF---NLDIP----IHRWICTLVLARSNGL--PSALKAVGEALKLSSQKME 124 (675)
Q Consensus 54 ~~~l~~~L~~~~~~kV~HNa~FD~~~L~~~~---Gi~i~----~~~~~DTmi~A~~l~~--~~sL~~la~~l~l~~~k~~ 124 (675)
T Consensus 88 ~~efl~FI~d--~~LVaHNa~FD~~FLn~El~r~~~~~~~~~~~~~viDTL~lAR~~~Pg~~~sLdaLc~r~~Id~s~R- 164 (246)
T PRK08858 88 HQEFLEFIKG--AELVAHNAPFDVGFMDYEFEKLNPAIGKTDDYCKVTDTLAMAKKIFPGKRNNLDVLCERYGIDNSHR- 164 (246)
T ss_pred HHHHHHHHCC--CEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHCCCEEHHHHHHHHCCCCCCCHHHHHHHCCCCCCCC-
T ss_conf 9999999589--9899972288899999999982877675134201002999999868999888899999819898883-
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 3799998620211234332346785853289999998998999999996301
Q gi|254781193|r 125 EGKELIARFCKGETHECLYDRNKPNHREAWRLFGEYCKGDVTVTREIFKRLE 176 (675)
Q Consensus 125 ~~k~l~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~Ya~~Dv~~t~~L~~~l~ 176 (675)
T Consensus 165 --------------------------------~~HgALlDa~lLa~Vyl~mt 184 (246)
T PRK08858 165 --------------------------------TLHGALLDAEILADVYLLMT 184 (246)
T ss_pred --------------------------------CCCCHHHHHHHHHHHHHHHC
T ss_conf --------------------------------40230888999999999972