HHsearch alignment for GI: 254781193 and conserved domain: PTZ00166

>PTZ00166 DNA polymerase delta catalytic subunit; Provisional.
Probab=98.02  E-value=0.00066  Score=43.71  Aligned_cols=112  Identities=20%  Similarity=0.243  Sum_probs=65.7

Q ss_pred             HHHHHHHHHH--CCCCCEEEEEEH-HHHHHHHHH---HCCCC----------------------------------CCCC
Q ss_conf             4379999986--388981999730-774999998---60899----------------------------------8842
Q gi|254781193|r   52 VMPQVLKEAL--ENTDVTIVAHNS-YFERTVLKA---CFNLD----------------------------------IPIH   91 (675)
Q Consensus        52 ~~~~~l~~~L--~~~~~~kV~HNa-~FD~~~L~~---~~Gi~----------------------------------i~~~   91 (675)
T Consensus       358 eLL~aF~~fi~~~DPDII-TGYNI~nFDlpYLl~Ra~~L~i~~f~~lgRlk~~~~~~~~~~~~s~a~G~~~~k~i~i~-G  435 (1081)
T PTZ00166        358 TLLLAWNDFIIAVDPDFL-TGYNIINFDLPYLLNRATALNLKKFKFLTRIKSVKSTVKDSIFSSNQFGTHENKEINIE-G  435 (1081)
T ss_pred             HHHHHHHHHHHHCCCCEE-EECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEC-C
T ss_conf             999999999987099899-96687888889999999995886433236115776522026566555566655068675-7


Q ss_pred             C-EEEHHHHHHHH-C-CCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             0-33168899986-7-8999689899829981100437999986202112343323467858532899999989989999
Q gi|254781193|r   92 R-WICTLVLARSN-G-LPSALKAVGEALKLSSQKMEEGKELIARFCKGETHECLYDRNKPNHREAWRLFGEYCKGDVTVT  168 (675)
Q Consensus        92 ~-~~DTmi~A~~l-~-~~~sL~~la~~l~l~~~k~~~~k~l~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~Ya~~Dv~~t  168 (675)
T Consensus       436 Rv~~Dl~~~v~r~~kL~SYkLntVs~~f-LgeqKeDV~~~~I~~l-------------~~~~~e~r~rla~YClkDa~L~  501 (1081)
T PTZ00166        436 RILFDVYDLIRRDYKLKSYSLNYVSFEF-LKEQKEDVHYSTINKL-------------QNGNPEDRKRIASYCLKDSILP  501 (1081)
T ss_pred             EEEEEHHHHHHHHCCCCCCCHHHHHHHH-HCCCCCCCCHHHHHHH-------------HCCCHHHHHHHHHHHHHHHHHH
T ss_conf             8996469999875587857688899998-1887533799999999-------------8149378899999989989999


Q ss_pred             HHHHHHCCCCH
Q ss_conf             99996301040
Q gi|254781193|r  169 REIFKRLEPLS  179 (675)
Q Consensus       169 ~~L~~~l~~~~  179 (675)
T Consensus       502 lrL~~KL~~l~  512 (1081)
T PTZ00166        502 LRLIDKLLLLY  512 (1081)
T ss_pred             HHHHHHHHHHH
T ss_conf             99999998999