HHsearch alignment for GI: 254781193 and conserved domain: PTZ00166
>PTZ00166 DNA polymerase delta catalytic subunit; Provisional.
Probab=98.02 E-value=0.00066 Score=43.71 Aligned_cols=112 Identities=20% Similarity=0.243 Sum_probs=65.7
Q ss_pred HHHHHHHHHH--CCCCCEEEEEEH-HHHHHHHHH---HCCCC----------------------------------CCCC
Q ss_conf 4379999986--388981999730-774999998---60899----------------------------------8842
Q gi|254781193|r 52 VMPQVLKEAL--ENTDVTIVAHNS-YFERTVLKA---CFNLD----------------------------------IPIH 91 (675)
Q Consensus 52 ~~~~~l~~~L--~~~~~~kV~HNa-~FD~~~L~~---~~Gi~----------------------------------i~~~ 91 (675)
T Consensus 358 eLL~aF~~fi~~~DPDII-TGYNI~nFDlpYLl~Ra~~L~i~~f~~lgRlk~~~~~~~~~~~~s~a~G~~~~k~i~i~-G 435 (1081)
T PTZ00166 358 TLLLAWNDFIIAVDPDFL-TGYNIINFDLPYLLNRATALNLKKFKFLTRIKSVKSTVKDSIFSSNQFGTHENKEINIE-G 435 (1081)
T ss_pred HHHHHHHHHHHHCCCCEE-EECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEC-C
T ss_conf 999999999987099899-96687888889999999995886433236115776522026566555566655068675-7
Q ss_pred C-EEEHHHHHHHH-C-CCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 0-33168899986-7-8999689899829981100437999986202112343323467858532899999989989999
Q gi|254781193|r 92 R-WICTLVLARSN-G-LPSALKAVGEALKLSSQKMEEGKELIARFCKGETHECLYDRNKPNHREAWRLFGEYCKGDVTVT 168 (675)
Q Consensus 92 ~-~~DTmi~A~~l-~-~~~sL~~la~~l~l~~~k~~~~k~l~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~Ya~~Dv~~t 168 (675)
T Consensus 436 Rv~~Dl~~~v~r~~kL~SYkLntVs~~f-LgeqKeDV~~~~I~~l-------------~~~~~e~r~rla~YClkDa~L~ 501 (1081)
T PTZ00166 436 RILFDVYDLIRRDYKLKSYSLNYVSFEF-LKEQKEDVHYSTINKL-------------QNGNPEDRKRIASYCLKDSILP 501 (1081)
T ss_pred EEEEEHHHHHHHHCCCCCCCHHHHHHHH-HCCCCCCCCHHHHHHH-------------HCCCHHHHHHHHHHHHHHHHHH
T ss_conf 8996469999875587857688899998-1887533799999999-------------8149378899999989989999
Q ss_pred HHHHHHCCCCH
Q ss_conf 99996301040
Q gi|254781193|r 169 REIFKRLEPLS 179 (675)
Q Consensus 169 ~~L~~~l~~~~ 179 (675)
T Consensus 502 lrL~~KL~~l~ 512 (1081)
T PTZ00166 502 LRLIDKLLLLY 512 (1081)
T ss_pred HHHHHHHHHHH
T ss_conf 99999998999