>TIGR01405 polC_Gram_pos DNA polymerase III, alpha subunit, Gram-positive type; InterPro: IPR006308 These are the polypeptide chains of DNA polymerase III. Full-length homologs of this protein are restricted to the Gram-positive lineages, including the Mycoplasmas. This protein is designated alpha chain and given the gene symbol polC, but is not a full-length homolog of other polC genes. The N-terminal region of about 200 amino acids is rich in low-complexity sequence and poorly alignable. ; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication, 0005737 cytoplasm.

Probab=99.20 E-value=2.1e-10 Score=85.72 Aligned_cols=69 Identities=28% Similarity=0.297 Sum_probs=51.5 Q ss_pred HHHHHHHHHHCCCCCEEEEEE-HHHHHHHHHHH---CCCCCCCCCEEEHHHHHHHHCC---CCCHHHHHHHCCCCCCH Q ss_conf 437999998638898199973-07749999986---0899884203316889998678---99968989982998110 Q gi|254781193|r 52 VMPQVLKEALENTDVTIVAHN-SYFERTVLKAC---FNLDIPIHRWICTLVLARSNGL---PSALKAVGEALKLSSQK 122 (675) Q Consensus 52 ~~~~~l~~~L~~~~~~kV~HN-a~FD~~~L~~~---~Gi~i~~~~~~DTmi~A~~l~~---~~sL~~la~~l~l~~~k 122 (675) T Consensus 274 ~vL~k~~~f~~--d~ilVAHNGasFD~~Fl~~~~~k~~~~~~~~p~IDTL~Lar~lnP~y~sh~Lg~~~~Kl~v~~~~ 349 (1264) T TIGR01405 274 EVLEKFKEFLK--DSILVAHNGASFDIGFLNTNFEKVGLEPLENPVIDTLELARALNPEYKSHRLGEIAKKLGVDLDD 349 (1264) T ss_pred HHHHHHHHHHC--CEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCC T ss_conf 99999999769--75888627610366889889876277423365113889999837311344542233320552153

HHsearch alignment for GI: 254781193 and conserved domain: TIGR01405