HHsearch alignment for GI: 254781193 and conserved domain: pfam10108
>pfam10108 Exon_PolB Predicted 3'-5' exonuclease related to the exonuclease domain of PolB. This domain is found in various prokaryotic 3'-5' exonucleases and hypothetical proteins.
Probab=98.26 E-value=2.3e-05 Score=53.15 Aligned_cols=132 Identities=19% Similarity=0.335 Sum_probs=83.9
Q ss_pred EEEEEEEEE--CCEEEEEEECCC----CHHHHHHHHHHHCCCCCEEEEEEH-HHHHHHHHH---HCCCCCCC--------
Q ss_conf 199999998--480399997888----104379999986388981999730-774999998---60899884--------
Q gi|254781193|r 29 CVILFAFGF--DDHPVELWDCVH----DPVMPQVLKEALENTDVTIVAHNS-YFERTVLKA---CFNLDIPI-------- 90 (675)
Q Consensus 29 ~i~~i~~a~--~~~~v~~~d~~~----~~~~~~~l~~~L~~~~~~kV~HNa-~FD~~~L~~---~~Gi~i~~-------- 90 (675)
T Consensus 10 riVaIs~v~~~~~~~~~v~slg~~~~~E~~ll~~F~~~i~~~~P~LVs~NG~gFDlPvL~~RAl~~gi~ap~~~~~~~~~ 89 (211)
T pfam10108 10 RIVAISAVIADDDGGFKVWSLGDPESSEKELIQRFFDGIEKYTPQLVSFNGRGFDLPVLHYRALKHGVSAPRYFDTGDRD 89 (211)
T ss_pred EEEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHCCCCC
T ss_conf 16999999996699279987889998999999999999984398288656865548999999998188850787567876
Q ss_pred CCE-----------EEHHHHHHHHC--CCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 203-----------31688999867--89996898998299811004379999862021123433234678585328999
Q gi|254781193|r 91 HRW-----------ICTLVLARSNG--LPSALKAVGEALKLSSQKMEEGKELIARFCKGETHECLYDRNKPNHREAWRLF 157 (675)
Q Consensus 91 ~~~-----------~DTmi~A~~l~--~~~sL~~la~~l~l~~~k~~~~k~l~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 157 (675)
T Consensus 90 ~kw~nY~~Ry~~~H~DLmd~l~~~g~~~~~~Ld~~a~l~G~PGK~~~~G~~V~~~~----------------~~G~l~~I 153 (211)
T pfam10108 90 FKWNNYFNRYSTRHLDLMDLLSGYGARANAPLDEVAALLGLPGKMGVDGSQVWELY----------------QAGKIEEI 153 (211)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHH----------------HCCCHHHH
T ss_conf 65444112356544548999873288677898999998199987877645899999----------------85988899
Q ss_pred HHHHHHHHHHHHHHHHHCC
Q ss_conf 9998998999999996301
Q gi|254781193|r 158 GEYCKGDVTVTREIFKRLE 176 (675)
Q Consensus 158 ~~Ya~~Dv~~t~~L~~~l~ 176 (675)
T Consensus 154 ~~YCe~DvlnTylv~LR~~ 172 (211)
T pfam10108 154 RDYCETDVLNTYLVYLRFQ 172 (211)
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 9998876899999999999