HHsearch alignment for GI: 254781193 and conserved domain: smart00474
>smart00474 35EXOc 3'-5' exonuclease. 3\' -5' exonuclease proofreading domain present in DNA polymerase I, Werner syndrome helicase, RNase D and other enzymes
Probab=99.78 E-value=1.4e-17 Score=132.19 Aligned_cols=146 Identities=18% Similarity=0.184 Sum_probs=103.6
Q ss_pred CEEEEEECCCCCCCCCCCCCHHHCCCCEEEEEEEEECCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHH
Q ss_conf 68999814178987000440011279819999999848039999788810437999998638898199973077499999
Q gi|254781193|r 2 ATLFIDFETRSPIDLTKCGICKYAEDVCVILFAFGFDDHPVELWDCVHDPVMPQVLKEALENTDVTIVAHNSYFERTVLK 81 (675)
Q Consensus 2 k~i~lD~ET~~~~dl~~~Gl~~y~~~~~i~~i~~a~~~~~v~~~d~~~~~~~~~~l~~~L~~~~~~kV~HNa~FD~~~L~ 81 (675)
T Consensus 22 ~~i~~DtE~~~--------~~~~--~~~l~~iql~~~~~~~yi~~~~~~~~~~~~l~~ll~~~~i~kv~hn~k~D~~~L~ 91 (172)
T smart00474 22 GEVALDTETTG--------LNSY--SGKLVLIQISVTGEGAFIIDPLALGDDLEILKDLLEDETITKVGHNAKFDLHVLA 91 (172)
T ss_pred CEEEEECCCCC--------CCCC--CCEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEECHHHHHHHHH
T ss_conf 95999883068--------8537--8758999999689848997012242179999999809998599974599999999
Q ss_pred HHCCCCCCCCCEEEHHHHHHHHCCC---CCHHHHHHHC-CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 8608998842033168899986789---9968989982-99811004379999862021123433234678585328999
Q gi|254781193|r 82 ACFNLDIPIHRWICTLVLARSNGLP---SALKAVGEAL-KLSSQKMEEGKELIARFCKGETHECLYDRNKPNHREAWRLF 157 (675)
Q Consensus 82 ~~~Gi~i~~~~~~DTmi~A~~l~~~---~sL~~la~~l-~l~~~k~~~~k~l~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 157 (675)
T Consensus 92 ~-~gi~l~--~v~Dt~ia~~l~~~~~~~~~L~~l~~~~~~~~l~k~-------------~-----~~~~w~~rp-l~~~~ 149 (172)
T smart00474 92 R-FGIELE--NIFDTMLAAYLLLGGPSKHGLATLLKEYLGVELDKE-------------E-----QKSDWGARP-LSEEQ 149 (172)
T ss_pred H-CCCCCC--CCHHHHHHHHHCCCCCCHHHHHHHHHHHCCEECCCC-------------C-----CCCCCCCCC-CCHHH
T ss_conf 7-798567--524679987750579864899999999749231555-------------5-----646667899-90999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCH
Q ss_conf 9998998999999996301040
Q gi|254781193|r 158 GEYCKGDVTVTREIFKRLEPLS 179 (675)
Q Consensus 158 ~~Ya~~Dv~~t~~L~~~l~~~~ 179 (675)
T Consensus 150 ~~YAa~Da~~~~~l~~~l~~~L 171 (172)
T smart00474 150 LQYAAEDADALLRLYEKLEKEL 171 (172)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999972