PSIBLAST alignment of GI: 254781193 and protein with PDB id: 1bgx
gi|3891938|pdb|1BGX|T Chain T, Taq Polymerase In Complex With Tp7, An Inhibitory Fab Length = 832
>gi|7246019|pdb|1CMW|A Chain A, Crystal Structure Of Taq Dna-Polymerase Shows A New Orientation For The Structure-Specific Nuclease Domain Length = 832
Score = 310 bits (793), Expect = 6e-82, Method: Composition-based stats.
Identities = 104/610 (17%), Positives = 186/610 (30%), Gaps = 149/610 (24%)
Query: 76 ERTVLKACFNLDIPIHRWICTLVLARSNGLPSAL-KAVGEALKLSSQKMEEGKELIARFC 134
+ +VL L +P ++LA + + V
Sbjct: 355 DLSVLALREGLGLPPG--DDPMLLAYLLDPSNTTPEGVARRYG----------------- 395
Query: 135 KGETHECLYDRNKPNHREAWRLFGEYCKGDVTVTREIFKRLEPLSSKEQELWYLDQTIND 194
GE E +R + R L+G R ++ E+ L + +
Sbjct: 396 -GEWTEEAGERAALSERLFANLWGRLEGE----ERLLWLYR----EVERPLSAVLAHMEA 446
Query: 195 RGYCVDVALAHTLNQIVDVERTKLDQELESLTYGLVSSSRCLEKLKTWLFLETGLH---- 250
G +DVA L+ V E +L+ E+ L + ++L+ LF E GL
Sbjct: 447 TGVRLDVAYLRALSLEVAEEIARLEAEVFRLAGHP-FNLNSRDQLERVLFDELGLPAIGK 505
Query: 251 LEDLTE-TTCQRVLSSNKKLTPQAIQVFNNRMRASRSAVLKLNTLVEAMNSD-GRLRGTL 308
E + +T VL + ++ P ++ R ++ ++ L + ++ GRL
Sbjct: 506 TEKTGKRSTSAAVLEALREAHPIVEKILQYR-ELTKLKSTYIDPLPDLIHPRTGRLHTRF 564
Query: 309 QFLGASRTGRWSGCVFPPQNLPRPSRSHEELDQIITHLPTSITSDPDPLQIISDCVRSCV 368
A+ TGR S QN+P + + +R
Sbjct: 565 NQ-TATATGRLSSSDPNLQNIPVRTP-------------------------LGQRIRRAF 598
Query: 369 IASEGKKLVVADLAGIEARVLAWMAGEQWKLKAFETGEDLYVTTYARSFNVAPAQVTKDQ 428
IA EG LV D + IE RVLA ++G++ ++ F+ G D++ T + F V V
Sbjct: 599 IAEEGWLLVALDYSQIELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVDPLM 658
Query: 429 RAIGKVMELALGYQGGAKAFQKMASTTGLNLNTFAHLVKTNSAPEEWEDAENFCRWMQEN 488
R K + G++
Sbjct: 659 RRAAKTINF--------------GVLYGMS------------------------------ 674
Query: 489 HPEHAIEDLFIGTACERVKKAWRQKHSRVSELWNELHQAFEQTIENGKAIIARKRRDVPL 548
+ E + + + Q +V + + E+ G
Sbjct: 675 AHRLSQELAIPYEEAQAFIERYFQSFPKVRAW---IEKTLEEGRRRGYVETL-------- 723
Query: 549 VYMKKDKNNLILMLPSGRSLVYRDVGNNRSYLNTTTRQLTREYTYGGKLTENIVQAVSRD 608
GR D+ + + R VQ + D
Sbjct: 724 ---------------FGRRRYVPDLEAR---VKSVREAAERMAFNMP------VQGTAAD 759
Query: 609 ILAEGMM----NATKAGYDIVLTVHDEIVCETPDTDEFNASML-YHLMTSNPSWAKGLPL 663
++ M+ + G ++L VHDE+V E P + L +M A +PL
Sbjct: 760 LMKLAMVKLFPRLEEMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPLA--VPL 817
Query: 664 KAEGYESKRY 673
+ E + +
Sbjct: 818 EVEVGIGEDW 827