PSIBLAST alignment of GI: 254781193 and protein with PDB id: 1d8y

>gi|6730276|pdb|1D8Y|A Chain A, Crystal Structure Of The Complex Of Dna Polymerase I Klenow Fragment With Dna Length = 605
 Score =  420 bits (1079), Expect = e-115,   Method: Composition-based stats.
 Identities = 100/699 (14%), Positives = 203/699 (29%), Gaps = 167/699 (23%)

Query: 10  TRSPIDLTKCGICKYAEDVCVILFAFGFDDHPVELWDCVHD----------PVMPQVLKE 59
           T S  +++            ++  +F  +          HD              ++LK 
Sbjct: 35  TDSLDNIS----------ANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKP 84

Query: 60  ALENTDVTIVAHNSYFERTVLKACFNLDIPIHRWICTLVLARSNGL---PSALKAVGEAL 116
            LE+     V  N  ++R +L     +++       T++ +           + ++ E  
Sbjct: 85  LLEDEKALKVGQNLKYDRGILANY-GIELRGIA-FDTMLESYILNSVAGRHDMDSLAER- 141

Query: 117 KLSSQKMEEGKELIARFCKGETHECLYDRNKPNHREAWRLFGEYCKGDVTVTREIFKRLE 176
                       L  +    E            ++ A    G Y   D  VT ++  ++ 
Sbjct: 142 -----------WLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMW 190

Query: 177 PLSSKE-----------QELWYLDQTINDRGYCVDVALAHTLNQIVDVERTKLDQELESL 225
           P   K              L  +   I   G  +D  + H  ++ + +   +L+++   +
Sbjct: 191 PDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEI 250

Query: 226 TYGLVSSSRCLEKLKTWLFLETGLHLEDLTE----TTCQRVLSSNKKLTPQAIQVFNNRM 281
                 +    ++L+T LF + G+     T     +T + VL       P    +   R 
Sbjct: 251 AG-EEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYR- 308

Query: 282 RASRSAVLKLNTLVEAMNSDGRLRGTLQFLGASRTGRWSGCVFPPQNLPRPSRSHEELDQ 341
             ++      + L   +N       T      + TGR S      QN+P  +        
Sbjct: 309 GLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRR--- 365

Query: 342 IITHLPTSITSDPDPLQIISDCVRSCVIASEGKKLVVADLAGIEARVLAWMAGEQWKLKA 401
                                 +R   IA E   +V AD + IE R++A ++ ++  L A
Sbjct: 366 ----------------------IRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTA 403

Query: 402 FETGEDLYVTTYARSFNVAPAQVTKDQRAIGKVMELALGYQGGAKAFQKMASTTGLNLNT 461
           F  G+D++  T A  F +    VT +QR   K +                    G++   
Sbjct: 404 FAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINF--------------GLIYGMS--- 446

Query: 462 FAHLVKTNSAPEEWEDAENFCRWMQENHPEHAIEDLFIGTACERVKKAWRQKHSRVSELW 521
                                          A +        ++    + +++  V E  
Sbjct: 447 ---------------------------AFGLARQLNIPRKEAQKYMDLYFERYPGVLEYM 479

Query: 522 NELHQAFEQTIENGKAIIARKRRDVPLVYMKKDKNNLILMLPSGRSLVYRDVGNNRSYLN 581
                  ++                             +    GR L   D+ ++     
Sbjct: 480 ERTRAQAKE--------------------------QGYVETLDGRRLYLPDIKSSNGARR 513

Query: 582 TTTRQLTREYTYGGKLTENIVQAVSRDILAEGMMNATKA------GYDIVLTVHDEIVCE 635
               +               +Q  + DI+   M+              +++ VHDE+V E
Sbjct: 514 AAAER---------AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFE 564

Query: 636 TPDTDEFNASM-LYHLMTSNPSWAKGLPLKAEGYESKRY 673
               D    +  ++ LM +       +PL  E    + +
Sbjct: 565 VHKDDVDAVAKQIHQLMENCTR--LDVPLLVEVGSGENW 601