PSIBLAST alignment of GI: 254781193 and protein with PDB id: 2ajq
>gi|116666722|pdb|2AJQ|A Chain A, Structure Of Replicative Dna Polymerase Provides Insigts Into The Mechanisms For Processivity, Frameshifting And Editing Length = 704
>gi|116666726|pdb|2AJQ|F Chain F, Structure Of Replicative Dna Polymerase Provides Insigts Into The Mechanisms For Processivity, Frameshifting And Editing Length = 704
Score = 83.6 bits (205), Expect = 9e-14, Method: Composition-based stats.
Identities = 76/697 (10%), Positives = 158/697 (22%), Gaps = 141/697 (20%)
Query: 67 TIVAHNS-YFERTVLKACFN------LDIPIHRWICTLVLARSNGL-------------- 105
IV HN ++ L +P I TLVL+R
Sbjct: 55 LIVFHNGHKYDVPALTKLAKLQLNREFHLPRENCIDTLVLSRLIHSNLKDTDMGLLRSGK 114
Query: 106 -------PSALKAVGEALKLSSQKMEEGKELIARFCKGETHECLYDRNKPNHREAWRLFG 158
AL+A G L + ++ + + E + + N
Sbjct: 115 LPGKRFGSHALEAWGYRLGEMKGEYKDDFKRMLEEQGEEYVDGMEWWNFN------EEMM 168
Query: 159 EYCKGDVTVTREI-------------------------FKRLEPLSSKEQELWYLDQTIN 193
+Y DV VT+ + + E +L
Sbjct: 169 DYNVQDVVVTKALLEKLLSDKHYFPPEIDFTDVGYTTFWSESLEAVDIEHRAAWLLAKQE 228
Query: 194 DRGYCVDVALAHTLNQIVDVERTKLDQELESLTYGLVSSSRCLEKLKTWLFLETGLHLED 253
G+ D L + R++L ++L E TG L
Sbjct: 229 RNGFPFDTKAIEELYVELAARRSELLRKLTETFGSWYQPKGGTEMF---CHPRTGKPLPK 285
Query: 254 ----LTETTC---QRVLSSNKKLTPQAIQVFNNRMRASRSAVLKLNTLVEAMNSDGRLRG 306
T ++ + ++ + + + R + + + +V +S ++
Sbjct: 286 YPRIKTPKVGGIFKKPKNKAQREGREPCE-LDTREYVAGAPYTPVEHVVFNPSSRDHIQK 344
Query: 307 TLQFLGA-----SRTGRWSGCVFPPQNLPRPSRSHEELDQIITHLPTSITSDPDPLQIIS 361
LQ G + G + + + +I +
Sbjct: 345 KLQEAGWVPTKYTDKGAPVVDDEVLEGVRVDDPEKQAAIDLIKEYLMIQKRIGQSAEGDK 404
Query: 362 DCVRSCVIASEGKKLVVADLAGIEARVLAWMAGEQWKLKAFETGEDLYV-------TTYA 414
+R +A +GK + G ++ +
Sbjct: 405 AWLR--YVAEDGKIHGSVNPNGAVTGRATHAFPNLAQIPGVRSPYGEQCRAAFGAEHHLD 462
Query: 415 RSFNVAPAQVTKDQRAIGKVMEL-ALGYQGGAKAFQKMASTTGLNLNTFAHLVKTNSAPE 473
Q D +EL L + + A + +
Sbjct: 463 GITGKPWVQAGID----ASGLELRCLAHFMARFDNGEYAHEILNGDIHTKNQIAAELPTR 518
Query: 474 EWEDAENFCRWMQENHPEHAIEDLFIGTACERVKKAWRQKHSRVSELWNELHQAFEQTIE 533
+ + + + +KK + + ++ L + Q ++ +
Sbjct: 519 DNAKTFIYGFLYGAGDEKIGQIVGAGKERGKELKKKFLENTPAIAALRESIQQTLVESSQ 578
Query: 534 NGKAIIARKRRDVPLVYMKKDKNNLILMLPSGRSLVYRDVGNNRSYLNTTTRQLTREYTY 593
K + + GR + R
Sbjct: 579 WVAGEQQVKWKRR------------WIKGLDGRKVHVRSPHA------------------ 608
Query: 594 GGKLTENIVQAVSRDILAEGMMN----ATKAGYDI--------VLTVHDEIVCETPDTDE 641
++Q+ I ++ + G + VHDEI +
Sbjct: 609 ---ALNTLLQSAGALICKLWIIKTEEMLVEKGLKHGWDGDFAYMAWVHDEIQVGCRTEEI 665
Query: 642 FNASMLYHLMTSNPSWAKG-----LPLKAEGYESKRY 673
+ W L EG +
Sbjct: 666 AQV--VIETAQEAMRWVGDHWNFRCLLDTEGKMGPNW 700