HHsearch alignment of GI: 254781194 and MMDB domain: 3h1t_A_1-169_362-370

>3h1t_A (A:1-169,A:362-370) Type I site-specific restriction-modification system, R (restriction) subunit; hydrolase, restriction enzyme HSDR, ATP-binding; 2.30A {Vibrio vulnificus}
Probab=96.70  E-value=0.003  Score=40.60  Aligned_cols=80  Identities=14%  Similarity=0.011  Sum_probs=59.7

Q ss_pred             HCCHHHHHHHHH-HHHHHCCCEEE------E-------------EECCCCCCCCCEEEEECCCCE-EEEEEECCCCCCCH
Q ss_conf             205999999999-99997898899------9-------------714898876627999159919-99997278988698
Q gi|254781194|r    5 YLSEAKLEKRLV-KGSKKLDCLVF------K-------------TQFINQRGCPDRLIITPNGAH-FWVEMKTSRGRLSN   63 (98)
Q Consensus         5 ~m~E~~ie~~i~-~~~k~~g~~~~------k-------------~~~~g~~G~PDli~~~~~g~~-~fIEvK~~~gkls~   63 (98)
                      .|.|.++..+++ ..++.+||-..      .             .......|.||++++.++|.+ +.||.|+++-.++.
T Consensus        23 ~~~E~~vr~~~I~~lL~~lGw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~Dy~l~~~~~~p~~viEaK~~~~~l~~  102 (178)
T 3h1t_A           23 ALNEADTCRVYVTPKLKESGWENNPSAITEQYTFTDGRVQFKGSKVQRGEQKRADYLLKYTRDFPIAVVEAKPENSPVGQ  102 (178)
T ss_dssp             SCCHHHHHHHTHHHHHHHTTTTSTTCEEEEEEECCCCCEEEETTEEEECCCCEEEEEEEEETTEEEEEEEECCTTSCGGG
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCHHH
T ss_conf             89999999998589999769998865015899504653643687466688787508998779908999963789779999


Q ss_pred             HHHHHHHHHHHCCCEEEEECC
Q ss_conf             999999999978986999839
Q gi|254781194|r   64 AQKRVIATLLLYHQKVQVLSS   84 (98)
Q Consensus        64 ~Q~~~~~~l~~~G~~~~Vv~s   84 (98)
                      .-..-.......|.++.++.+
T Consensus       103 ~~~Q~~~Ya~~~~~~~~ilTN  123 (178)
T 3h1t_A          103 GXQQAKDYAEILGLKFAYSTN  123 (178)
T ss_dssp             SHHHHHHHHHHHTCSEEEEEC
T ss_pred             HHHHHHHHHHHCCCCEEEEEC
T ss_conf             999999978866887799979