HHsearch results for GI: 254781196 and protein with PDBid: 1dgs_A

>1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A*
Probab=99.71  E-value=4.3e-18  Score=134.48  Aligned_cols=66  Identities=33%  Similarity=0.553  Sum_probs=65.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             899999999999999999999975545898569899999999999999978642689897353889
Q gi|254781196|r   54 LSKGEAMIEVEYLVKIALHHQKWYYRLDNPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY  119 (119)
Q Consensus        54 Lsk~EA~~eie~L~k~I~~Hn~~YY~~D~P~ISDaEYD~L~~eL~~LE~~~PeL~~~dSPT~~VGy  119 (119)
                      |++.+++.+++.|+++|.+||++||++++|+|||++||+|+++|..||.+||+++.++|||++||+
T Consensus         1 m~~~~~~~~i~~L~~~i~~~~~~Yy~~~~p~isD~eYD~L~~~L~~Le~~~p~~~~~~spt~~vG~   66 (667)
T 1dgs_A            1 MTREEARRRINELRDLIRYHNYRYYVLADPEISDAEYDRLLRELKELEERFPEFKSPDSPTEQVGA   66 (667)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCSSSSHHHHHHHHHHTTSSGGGCCTTSGGGGCSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf             987999999999999999999998648999789899999999999999868055699998532477