HHsearch alignment for GI: 254781197 and conserved domain: COG0324

>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis].

Probab=97.78  E-value=1.4e-05  Score=53.24  Aligned_cols=55  Identities=16%  Similarity=0.304  Sum_probs=40.6

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHCCCEEEE---------EEECCCCCCCCCCCCCCCCCCCH
Q ss_conf             97189998899999899999998518981799---------86118889998323553000123
Q gi|254781197|r    1 MAHIFVLIGASGVGETTIAKQVVLNSEYLVMP---------VGVTTRRPRVDEKQYIDYRFISQ   55 (185)
Q Consensus         1 m~kiivi~GpSGsGK~tl~~~L~~~~~~~~~~---------is~TTR~~R~~E~~g~dY~Fvs~   55 (185)
T Consensus         2 ~~~~i~I~GPTAsGKT~lai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi   65 (308)
T COG0324           2 KPKLIVIAGPTASGKTALAIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDI   65 (308)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHCCCCEEECCHHHHCCCCCCCCCCCCHHHHCCCCEEEECC
T ss_conf             9637999898875778999999998299289302355318886307999999985899787545