HHsearch alignment for GI: 254781197 and conserved domain: COG1160

Probab=96.74  E-value=0.0011  Score=42.08  Aligned_cols=87  Identities=18%  Similarity=0.287  Sum_probs=53.9

Q ss_pred             EEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCC--CCCCCCCCCCCHHHHHHHCCCCEEEEEEEECCCEEEEEC
Q ss_conf             999889999989999999851898179986118889998--323553000123542111027636445550486055443
Q gi|254781197|r    5 FVLIGASGVGETTIAKQVVLNSEYLVMPVGVTTRRPRVD--EKQYIDYRFISQSQFKGWKHTGLFIETTKVRDEYYGYLK   82 (185)
Q Consensus         5 ivi~GpSGsGK~tl~~~L~~~~~~~~~~is~TTR~~R~~--E~~g~dY~Fvs~e~F~~~i~~g~flE~~~~~g~~YGt~~   82 (185)
T Consensus       181 iaiiGrPNvGKSsLiN~ilgeeR~Iv~~~aGTTRD~I~~~~e~~~~~~~liDTAGiRrk~ki~e~~E~-------~Sv~r  253 (444)
T COG1160         181 IAIIGRPNVGKSSLINAILGEERVIVSDIAGTTRDSIDIEFERDGRKYVLIDTAGIRRKGKITESVEK-------YSVAR  253 (444)
T ss_pred             EEEEECCCCCCHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCEEE-------EEEHH
T ss_conf             99992787870588877506825984599986220331258998818999987787746641242688-------75054


Q ss_pred             CCHHHHHHHCCCCCCCCC
Q ss_conf             200233320123200243
Q gi|254781197|r   83 EDINNPMEHGYDILLILT  100 (185)
Q Consensus        83 ~~i~~~~~~g~~~il~id  100 (185)
T Consensus       254 -t-~~aI~~a~vvllviD  269 (444)
T COG1160         254 -T-LKAIERADVVLLVID  269 (444)
T ss_pred             -H-HHHHHHCCEEEEEEE
T ss_conf             -6-767865688999998