HHsearch alignment for GI: 254781197 and conserved domain: PRK03731

>PRK03731 aroL shikimate kinase II; Reviewed.
Probab=98.22  E-value=4.8e-06  Score=55.93  Aligned_cols=151  Identities=15%  Similarity=0.103  Sum_probs=68.9

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCC--CCCC--CHHHHHHHCCCCEEEEEEEECCC
Q ss_conf             9718999889999989999999851898179986118889998323553--0001--23542111027636445550486
Q gi|254781197|r    1 MAHIFVLIGASGVGETTIAKQVVLNSEYLVMPVGVTTRRPRVDEKQYID--YRFI--SQSQFKGWKHTGLFIETTKVRDE   76 (185)
Q Consensus         1 m~kiivi~GpSGsGK~tl~~~L~~~~~~~~~~is~TTR~~R~~E~~g~d--Y~Fv--s~e~F~~~i~~g~flE~~~~~g~   76 (185)
T Consensus         1 M~~~I~LiG~mGsGKstiGk~LA~~L-~~~fi--D~D~~Ie--~~~g~sI~eif~~~Ge~~FR~~E~--~~l~~--l---   68 (172)
T PRK03731          1 MTQPLFLVGPRGCGKTTVGMALAQAL-GYRFV--DTDLWLQ--STLQMTVAEIVEREGWAGFRARES--AALEA--V---   68 (172)
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHH-CCCEE--ECCHHHH--HHHCCCHHHHHHHHCHHHHHHHHH--HHHHH--H---
T ss_conf             99988998899998899999999985-99979--7869999--883989999999839899999999--99998--4---


Q ss_pred             EEEEECCCHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHH------C----CCCCHHHHH--
Q ss_conf             0554432002333201232002431000133210553101122213328999998863------0----342078999--
Q gi|254781197|r   77 YYGYLKEDINNPMEHGYDILLILTHQGLAPLKKLYEDQVTSIFIAPPSEAELIQRRIK------R----REDTPFNLD--  144 (185)
Q Consensus        77 ~YGt~~~~i~~~~~~g~~~il~id~~G~~~lk~~~~~~~~~IfI~pps~~~L~~RL~~------R----~~d~~~~i~--  144 (185)
T Consensus        69 ---~-~--~~~VIstGGG~v~~--~~n~~~L~~----~g~vv~L~~-~~~~l~~Rl~~~~~~~~RPll~~~~~~~~i~~l  135 (172)
T PRK03731         69 ---T-A--PSTVVATGGGIILT--EENRAFMRN----NGIVIYLCA-PVSVLANRLEADPEEDQRPTLTGKPLSEEVAEV  135 (172)
T ss_pred             ---C-C--CCEEEEECCCCCCC--HHHHHHHHH----CCEEEEEEC-CHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf             ---2-7--88289807864268--999999996----899999979-999999998138778989878899879999999


Q ss_pred             --HHHHHHHHCCCEEEECC-CHHHHHHHHHHHHHHHHH
Q ss_conf             --99998763698899939-789999999999999985
Q gi|254781197|r  145 --PDLFGKNHSYSFTIVNN-HLPTACRQVGFIREFVKQ  179 (185)
Q Consensus       145 --~rl~~~~~~fD~~IvNd-dle~a~~~l~~I~e~~~~  179 (185)
T Consensus       136 ~~~R~~~Y~~~a~~ii~~~~~~~~i~~~---Il~~L~e  170 (172)
T PRK03731        136 LAERDALYREVAHHIIDATQPPSQVVSE---ILSALAQ  170 (172)
T ss_pred             HHHHHHHHHHHCCEEECCCCCHHHHHHH---HHHHHHH
T ss_conf             9999999998489988798999999999---9998732