HHsearch alignment for GI: 254781197 and conserved domain: PRK13851

>PRK13851 type IV secretion system protein VirB11; Provisional.
Probab=96.71  E-value=0.002  Score=40.56  Aligned_cols=40  Identities=20%  Similarity=0.163  Sum_probs=27.9

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHHCCC-EEEEEEECCCCCC
Q ss_conf             718999889999989999999851898-1799861188899
Q gi|254781197|r    2 AHIFVLIGASGVGETTIAKQVVLNSEY-LVMPVGVTTRRPR   41 (185)
Q Consensus         2 ~kiivi~GpSGsGK~tl~~~L~~~~~~-~~~~is~TTR~~R   41 (185)
T Consensus       162 r~NIlIsGgTGSGKTTllnALl~~IP~~eRIvtIEDt~EL~  202 (343)
T PRK13851        162 RLTMLLCGPTGSGKTTMSKTLISAIPPQERLITIEDTLELV  202 (343)
T ss_pred             CCCEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCC
T ss_conf             98899988898619999999996289655279961150025