HHsearch alignment for GI: 254781197 and conserved domain: PRK13947

>PRK13947 shikimate kinase; Provisional.
Probab=98.02  E-value=2.4e-05  Score=51.88  Aligned_cols=149  Identities=19%  Similarity=0.203  Sum_probs=67.8

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCC--CCC--CCHHHHHHHCCCCEEEEEEEECCC
Q ss_conf             9718999889999989999999851898179986118889998323553--000--123542111027636445550486
Q gi|254781197|r    1 MAHIFVLIGASGVGETTIAKQVVLNSEYLVMPVGVTTRRPRVDEKQYID--YRF--ISQSQFKGWKHTGLFIETTKVRDE   76 (185)
Q Consensus         1 m~kiivi~GpSGsGK~tl~~~L~~~~~~~~~~is~TTR~~R~~E~~g~d--Y~F--vs~e~F~~~i~~g~flE~~~~~g~   76 (185)
T Consensus         1 mkn-I~LiG~mGsGKTtiGk~La~~L~-~~fi--D~D~~Ie--~~~g~sI~eIf~~~GE~~FR~~-------E~~~l~~-   66 (171)
T PRK13947          1 MKN-IVLIGFMGTGKTTVGKKVATTLS-FGFI--DTDKEIE--KMAGMTVSEIFEKDGEVRFRSL-------EKAAVRK-   66 (171)
T ss_pred             CCC-EEEECCCCCCHHHHHHHHHHHHC-CCEE--ECHHHHH--HHCCCCHHHHHHHHCHHHHHHH-------HHHHHHH-
T ss_conf             985-89979999988999999999979-6989--8749999--8829988999998489999999-------9999997-


Q ss_pred             EEEEECCCHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCC-------CCCHHHH----HH
Q ss_conf             055443200233320123200243100013321055310112221332899999886303-------4207899----99
Q gi|254781197|r   77 YYGYLKEDINNPMEHGYDILLILTHQGLAPLKKLYEDQVTSIFIAPPSEAELIQRRIKRR-------EDTPFNL----DP  145 (185)
Q Consensus        77 ~YGt~~~~i~~~~~~g~~~il~id~~G~~~lk~~~~~~~~~IfI~pps~~~L~~RL~~R~-------~d~~~~i----~~  145 (185)
T Consensus        67 ~----~~~~~~VistGGG~v~--~~~n~~~l~~----~g~vi~L~~-~~~~l~~Rl~~~~~RPll~~~~~~~~l~~l~~~  135 (171)
T PRK13947         67 A----ARLKNLVIATGGGVVL--NPENIVQLRK----NGVLICLVA-RPEVILRRIKKKKDRPLLMVGNPEERIRELLKE  135 (171)
T ss_pred             H----CCCCCEEEECCCCCCC--CHHHHHHHHH----CCEEEEECC-CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             4----0368979978985006--9999999996----898999739-999999997289999979899879999999999


Q ss_pred             HHHHHHHCCCEEEECC--CHHHHHHHHHHHHH
Q ss_conf             9998763698899939--78999999999999
Q gi|254781197|r  146 DLFGKNHSYSFTIVNN--HLPTACRQVGFIRE  175 (185)
Q Consensus       146 rl~~~~~~fD~~IvNd--dle~a~~~l~~I~e  175 (185)
T Consensus       136 R~~~Y-~~Ad~~I~~~~~s~~ei~~~Ii~~~~  166 (171)
T PRK13947        136 REPFY-RFADFTIDTSDMTIDEVAEEIIKAYI  166 (171)
T ss_pred             HHHHH-HHCCEEEECCCCCHHHHHHHHHHHHH
T ss_conf             99999-97698988998999999999999999