HHsearch alignment for GI: 254781197 and conserved domain: TIGR00174
>TIGR00174 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; InterPro: IPR002627 tRNA isopentenyltransferases 2.5.1.8 from EC also known as tRNA delta(2)-isopentenylpyrophosphate transferases or IPP transferases. These enzymes modify both cytoplasmic and mitochondrial tRNAs at A(37) to give isopentenyl A(37) .; GO: 0004811 tRNA isopentenyltransferase activity, 0005524 ATP binding, 0008033 tRNA processing.
Probab=97.16 E-value=0.00021 Score=46.31 Aligned_cols=51 Identities=22% Similarity=0.465 Sum_probs=37.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCC-EEEE--------EEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8999889999989999999851898-1799--------8611888999832355300012
Q gi|254781197|r 4 IFVLIGASGVGETTIAKQVVLNSEY-LVMP--------VGVTTRRPRVDEKQYIDYRFIS 54 (185)
Q Consensus 4 iivi~GpSGsGK~tl~~~L~~~~~~-~~~~--------is~TTR~~R~~E~~g~dY~Fvs 54 (185)
T Consensus 1 vi~i~GpTAvGKs~L~i~La~~lnaEiI~~DS~qiYK~~dIgtaKp~~~e~~~ipH~l~D 60 (307)
T TIGR00174 1 VIVIMGPTAVGKSNLAIQLAKKLNAEIISVDSMQIYKGMDIGTAKPSLQERKGIPHHLID 60 (307)
T ss_pred CEEEEECCCCCHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCCCCHHHHCCCCCEEEE
T ss_conf 967740885547789999887689578743502322378753578896875349815851