HHsearch alignment for GI: 254781197 and conserved domain: TIGR02173
>TIGR02173 cyt_kin_arch cytidylate kinase, putative; InterPro: IPR011892 Proteins in this family are believed to be cytidylate kinase. Members of this family are found in the archaea and in spirochaetes, and differ considerably from the common bacterial form of cytidylate kinase described by IPR003136 from INTERPRO.; GO: 0004127 cytidylate kinase activity, 0005524 ATP binding, 0006139 nucleobase nucleoside nucleotide and nucleic acid metabolic process.
Probab=98.38 E-value=5.2e-07 Score=61.53 Aligned_cols=124 Identities=21% Similarity=0.275 Sum_probs=62.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCEEEEEEE-CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEE-EEEECCCEEEEE
Q ss_conf 89998899999899999998518981799861-1888999832355300012354211102763644-555048605544
Q gi|254781197|r 4 IFVLIGASGVGETTIAKQVVLNSEYLVMPVGV-TTRRPRVDEKQYIDYRFISQSQFKGWKHTGLFIE-TTKVRDEYYGYL 81 (185)
Q Consensus 4 iivi~GpSGsGK~tl~~~L~~~~~~~~~~is~-TTR~~R~~E~~g~dY~Fvs~e~F~~~i~~g~flE-~~~~~g~~YGt~ 81 (185)
T Consensus 2 ~I~ISGpPGSGktTvA~~lA~~Ls-l~~-iSaG~iRel--A~~~Gld---l~E--~-------~~aee~~eIDk~---iD 62 (173)
T TIGR02173 2 IITISGPPGSGKTTVAKILAEKLS-LKL-ISAGDIREL--AEKMGLD---LAE--S-------KYAEENPEIDKK---ID 62 (173)
T ss_pred EEEEECCCCCCHHHHHHHHHHHCC-CCE-ECCCHHHHH--HHHCCCC---HHH--H-------HHHCCCCCCCHH---HH
T ss_conf 788735896864789999998639-831-202007889--8642988---777--3-------443058631167---53
Q ss_pred CCCHHHHHHHCCCCCCCCCCCCHHHHH-HCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCH----HHHHHHHHHH
Q ss_conf 320023332012320024310001332-10553101122213328999998863034207----8999999987
Q gi|254781197|r 82 KEDINNPMEHGYDILLILTHQGLAPLK-KLYEDQVTSIFIAPPSEAELIQRRIKRREDTP----FNLDPDLFGK 150 (185)
Q Consensus 82 ~~~i~~~~~~g~~~il~id~~G~~~lk-~~~~~~~~~IfI~pps~~~L~~RL~~R~~d~~----~~i~~rl~~~ 150 (185)
T Consensus 63 ~-~~~E~A~~~~nvvlEsrlagW~~~~nG~yaD--~~iyL~A~-levRA~RIA~Re~k~~~~A~~~~~~REe~e 132 (173)
T TIGR02173 63 R-RIREIAEKEKNVVLESRLAGWILKKNGEYAD--VKIYLKAP-LEVRARRIAKRENKDLTVALKEIIEREESE 132 (173)
T ss_pred H-HHHHHHCCCCCEEEEEHHHHHHCCCCCCCCC--EEEEECCC-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 7-8855430489668852054331157889675--67886088-333243321136889899999999988762