HHsearch alignment for GI: 254781197 and conserved domain: TIGR03420

>TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda. Members of this protein family are Hda (Homologous to DnaA). These proteins are about half the length of DnaA and homologous over length of Hda. In the model species Escherichia coli, the initiation of DNA replication requires DnaA bound to ATP rather than ADP; Hda helps facilitate the conversion of DnaA-ATP to DnaA-ADP.

Probab=96.31  E-value=0.004  Score=38.89  Aligned_cols=26  Identities=23%  Similarity=0.437  Sum_probs=20.9

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHHCC
Q ss_conf             71899988999998999999985189
Q gi|254781197|r    2 AHIFVLIGASGVGETTIAKQVVLNSE   27 (185)
Q Consensus         2 ~kiivi~GpSGsGK~tl~~~L~~~~~   27 (185)
T Consensus        38 ~~~l~i~G~~GsGKTHLl~a~~~~~~   63 (226)
T TIGR03420        38 DRFLYLWGESGSGKSHLLQAACAAAE   63 (226)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf             88699989999988999999999986