HHsearch alignment for GI: 254781197 and conserved domain: cd00009
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Probab=96.63 E-value=0.0027 Score=39.85 Aligned_cols=25 Identities=28% Similarity=0.515 Sum_probs=21.1
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHC
Q ss_conf 7189998899999899999998518
Q gi|254781197|r 2 AHIFVLIGASGVGETTIAKQVVLNS 26 (185)
Q Consensus 2 ~kiivi~GpSGsGK~tl~~~L~~~~ 26 (185)
T Consensus 19 ~~~ill~GppGtGKT~la~~ia~~~ 43 (151)
T cd00009 19 PKNLLLYGPPGTGKTTLARAIANEL 43 (151)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 9808998999988659999999971