HHsearch alignment for GI: 254781197 and conserved domain: cd01898
>cd01898 Obg Obg subfamily. The Obg nucleotide binding protein subfamily has been implicated in stress response, chromosome partitioning, replication initiation, mycelium development, and sporulation. Obg proteins are among a large group of GTP binding proteins conserved from bacteria to humans. The E. coli homolog, ObgE is believed to function in ribosomal biogenesis. Members of the subfamily contain two equally and highly conserved domains, a C-terminal GTP binding domain and an N-terminal glycine-rich domain.
Probab=96.61 E-value=0.002 Score=40.57 Aligned_cols=41 Identities=17% Similarity=0.222 Sum_probs=30.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC
Q ss_conf 999889999989999999851898179986118889998323
Q gi|254781197|r 5 FVLIGASGVGETTIAKQVVLNSEYLVMPVGVTTRRPRVDEKQ 46 (185)
Q Consensus 5 ivi~GpSGsGK~tl~~~L~~~~~~~~~~is~TTR~~R~~E~~ 46 (185)
T Consensus 3 VAiiG~pNvGKSTLlN~l~~~~~~V-~~~pgTT~~~~~g~i~ 43 (170)
T cd01898 3 VGLVGLPNAGKSTLLSAISNAKPKI-ADYPFTTLVPNLGVVR 43 (170)
T ss_pred EEEECCCCCCHHHHHHHHHCCCCEE-ECCCCCCCCCEEEEEE
T ss_conf 8998999998999999996787603-2566652374477999