HHsearch alignment for GI: 254781197 and conserved domain: cd02030
>cd02030 NDUO42 NADH:Ubiquinone oxioreductase, 42 kDa (NDUO42) is a family of proteins that are highly similar to deoxyribonucleoside kinases (dNK). Members of this family have been identified as one of the subunits of NADH:Ubiquinone oxioreductase (complex I), a multi-protein complex located in the inner mitochondrial membrane. The main function of the complex is to transport electrons from NADH to ubiquinone, which is accompanied by the translocation of protons from the mitochondrial matrix to the inter membrane space.
Probab=97.31 E-value=0.00024 Score=45.98 Aligned_cols=24 Identities=17% Similarity=0.279 Sum_probs=21.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCC
Q ss_conf 899988999998999999985189
Q gi|254781197|r 4 IFVLIGASGVGETTIAKQVVLNSE 27 (185)
Q Consensus 4 iivi~GpSGsGK~tl~~~L~~~~~ 27 (185)
T Consensus 1 iI~IEGnIG~GKTTl~~~La~~l~ 24 (219)
T cd02030 1 VITVDGNIASGKGKLAKELAEKLG 24 (219)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 989967856799999999999859