>cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins, and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains, which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.

Probab=97.01  E-value=0.00067  Score=43.40  Aligned_cols=23  Identities=26%  Similarity=0.478  Sum_probs=20.6

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHH
Q ss_conf             71899988999998999999985
Q gi|254781197|r    2 AHIFVLIGASGVGETTIAKQVVL   24 (185)
Q Consensus         2 ~kiivi~GpSGsGK~tl~~~L~~   24 (185)
T Consensus        25 GEiv~ilGpNGaGKSTllk~i~G   47 (177)
T cd03222          25 GEVIGIVGPNGTGKTTAVKILAG   47 (177)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHC
T ss_conf             98999989999999999999968