HHsearch alignment for GI: 254781197 and conserved domain: cd03223
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=97.40 E-value=0.0002 Score=46.40 Aligned_cols=32 Identities=13% Similarity=0.232 Sum_probs=24.0
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf 71899988999998999999985189817998
Q gi|254781197|r 2 AHIFVLIGASGVGETTIAKQVVLNSEYLVMPV 33 (185)
Q Consensus 2 ~kiivi~GpSGsGK~tl~~~L~~~~~~~~~~i 33 (185)
T Consensus 27 Ge~v~i~G~sGsGKSTLl~~l~Gl~~~~~G~i 58 (166)
T cd03223 27 GDRLLITGPSGTGKSSLFRALAGLWPWGSGRI 58 (166)
T ss_pred CCEEEEECCCCCCHHHHHHHHCCCCCCCCCEE
T ss_conf 99999995899988999999869876998679