HHsearch alignment for GI: 254781197 and conserved domain: cd03288
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=97.44 E-value=0.00019 Score=46.61 Aligned_cols=49 Identities=10% Similarity=0.145 Sum_probs=30.6
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 71899988999998999999985189817998611888999832355300012354211
Q gi|254781197|r 2 AHIFVLIGASGVGETTIAKQVVLNSEYLVMPVGVTTRRPRVDEKQYIDYRFISQSQFKG 60 (185)
Q Consensus 2 ~kiivi~GpSGsGK~tl~~~L~~~~~~~~~~is~TTR~~R~~E~~g~dY~Fvs~e~F~~ 60 (185)
T Consensus 47 Ge~vaIvG~sGsGKSTL~~ll~gl~~p~~G~I~----------idg~di~~~~~~~lr~ 95 (257)
T cd03288 47 GQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIV----------IDGIDISKLPLHTLRS 95 (257)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEE----------ECCEEHHHCCHHHHHH
T ss_conf 999999999998199999999605667888899----------9989968799999975