HHsearch alignment for GI: 254781197 and conserved domain: pfam00437
>pfam00437 GSPII_E Type II/IV secretion system protein. This family contains both type II and type IV pathway secretion proteins from bacteria. VirB11 ATPase is a subunit of the Agrobacterium tumefaciens transfer DNA (T-DNA) transfer system, a type IV secretion pathway required for delivery of T-DNA and effector proteins to plant cells during infection.
Probab=97.01 E-value=0.00073 Score=43.17 Aligned_cols=116 Identities=10% Similarity=0.058 Sum_probs=55.6
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCC-EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEECCCEEEE
Q ss_conf 718999889999989999999851898-1799861188899983235530001235421110276364455504860554
Q gi|254781197|r 2 AHIFVLIGASGVGETTIAKQVVLNSEY-LVMPVGVTTRRPRVDEKQYIDYRFISQSQFKGWKHTGLFIETTKVRDEYYGY 80 (185)
Q Consensus 2 ~kiivi~GpSGsGK~tl~~~L~~~~~~-~~~~is~TTR~~R~~E~~g~dY~Fvs~e~F~~~i~~g~flE~~~~~g~~YGt 80 (185)
T Consensus 139 ~~~ilIsG~TGSGKTT~l~all~~i~~~~~riitiE--D~~El~l~~~~~-----------------v~l~~~~~~~--t 197 (283)
T pfam00437 139 RGNILVSGGTGSGKTTLLYALLNEINTDDERIVTIE--DPVEIQLEGPNQ-----------------VQLNTRLAGV--T 197 (283)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEC--CCCEECCCCCCE-----------------EEEEECCCCC--C
T ss_conf 975999889999889999999984087776278733--785231798878-----------------9998558876--9
Q ss_pred ECCCHHHHHHHCCCCCCCCCCCCHHHH---HHCCCCCHHHH-HHCCCCHHHHHHHHHHCCCC
Q ss_conf 432002333201232002431000133---21055310112-22133289999988630342
Q gi|254781197|r 81 LKEDINNPMEHGYDILLILTHQGLAPL---KKLYEDQVTSI-FIAPPSEAELIQRRIKRRED 138 (185)
Q Consensus 81 ~~~~i~~~~~~g~~~il~id~~G~~~l---k~~~~~~~~~I-fI~pps~~~L~~RL~~R~~d 138 (185)
T Consensus 198 ~~~ll~~~LR~~PD~IivGEiR~~Ea~~~l~a~~TGH~g~ltTiHA~sa~~ai~RL~~lg~~ 259 (283)
T pfam00437 198 FADLLRAALRQRPDRIMVGEIRDGETADILRAANTGHPGSLSTLHANSAAGALTRLEQLGME 259 (283)
T ss_pred HHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCC
T ss_conf 99999996388999897578699899999999975998407857149989999999985643