RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254781198|ref|YP_003065611.1| guanylate kinase [Candidatus Liberibacter asiaticus str. psy62] (117 letters) >d1xoua_ a.231.1.1 (A:) Secreted protein EspA {Escherichia coli [TaxId: 562]} Length = 160 Score = 22.9 bits (49), Expect = 6.8 Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 11 DTNHKGSNLPPEEIKNIQDHRITLLEKNYERLSDKVEASHTKLMEAILDN 60 D N K LP E I I D R + + ++ ++ A + ++A + Sbjct: 66 DKNAKA-QLPDEVISYINDPRNDITISGIDNINAQLGAGDLQTVKAAISA 114 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.320 0.134 0.375 Gapped Lambda K H 0.267 0.0651 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 418,410 Number of extensions: 17667 Number of successful extensions: 58 Number of sequences better than 10.0: 1 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 9 Length of query: 117 Length of database: 2,407,596 Length adjustment: 74 Effective length of query: 43 Effective length of database: 1,391,576 Effective search space: 59837768 Effective search space used: 59837768 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 47 (22.0 bits)