BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781199|ref|YP_003065612.1| hypothetical protein CLIBASIA_05530 [Candidatus Liberibacter asiaticus str. psy62] (157 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254781199|ref|YP_003065612.1| hypothetical protein CLIBASIA_05530 [Candidatus Liberibacter asiaticus str. psy62] gi|254040876|gb|ACT57672.1| hypothetical protein CLIBASIA_05530 [Candidatus Liberibacter asiaticus str. psy62] gi|317120664|gb|ADV02487.1| hypothetical protein SC1_gp005 [Liberibacter phage SC1] gi|317120808|gb|ADV02629.1| hypothetical protein SC1_gp005 [Candidatus Liberibacter asiaticus] Length = 157 Score = 315 bits (807), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 157/157 (100%), Positives = 157/157 (100%) Query: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA Sbjct: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60 Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK Sbjct: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120 Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK Sbjct: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 >gi|317120748|gb|ADV02570.1| hypothetical protein SC2_gp250 [Liberibacter phage SC2] gi|317120762|gb|ADV02583.1| hypothetical protein SC2_gp250 [Candidatus Liberibacter asiaticus] Length = 157 Score = 265 bits (676), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 127/157 (80%), Positives = 142/157 (90%) Query: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60 MIQSFLAGGLFRFLLRFIPS FERIVDVVSEYLTKKQSIEYDK KLE AK DSS QLDLA Sbjct: 1 MIQSFLAGGLFRFLLRFIPSSFERIVDVVSEYLTKKQSIEYDKWKLETAKIDSSLQLDLA 60 Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120 +IK GIEELK DKPI+LARI+AQ +KSGVKW+D F L+RPLTT FWIIVYP++VWWSVK Sbjct: 61 DIKYGIEELKADKPIKLARIKAQNIKSGVKWIDSFNTLVRPLTTLFWIIVYPMMVWWSVK 120 Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 EG+F+ PL++LSPF QEIIACILGFW+TDKIVQK++ Sbjct: 121 EGIFDKSPLSILSPFEQEIIACILGFWFTDKIVQKRR 157 >gi|317120705|gb|ADV02527.1| hypothetical protein SC2_gp005 [Liberibacter phage SC2] gi|317120766|gb|ADV02587.1| hypothetical protein SC2_gp005 [Candidatus Liberibacter asiaticus] Length = 158 Score = 263 bits (673), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 125/156 (80%), Positives = 144/156 (92%) Query: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60 MIQSFLAGGLFRFLLRFIPS FERIVDVVSEYLTKKQS+EY+K+++E+AK ++STQ++L Sbjct: 1 MIQSFLAGGLFRFLLRFIPSSFERIVDVVSEYLTKKQSLEYNKMQIELAKINTSTQVNLE 60 Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120 EIK GIEELK DKPIRLAR+++Q VK +KW++GF ALIRPLTT FWI+VYPLLVWWSVK Sbjct: 61 EIKYGIEELKADKPIRLARVKSQNVKIDIKWINGFNALIRPLTTLFWIVVYPLLVWWSVK 120 Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKK 156 E MF+ DPLTLLSPFTQEIIACILGFWYTDKIVQK+ Sbjct: 121 ERMFSIDPLTLLSPFTQEIIACILGFWYTDKIVQKR 156 >gi|315122886|ref|YP_004063375.1| hypothetical protein CKC_05710 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496288|gb|ADR52887.1| hypothetical protein CKC_05710 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 158 Score = 256 bits (654), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 123/157 (78%), Positives = 139/157 (88%) Query: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60 MIQSFLAGGLFRF LRF+PS FE+I D V EYL +KQSIEYDK+KLE + +SSTQLDLA Sbjct: 1 MIQSFLAGGLFRFALRFVPSVFEKIADGVLEYLMQKQSIEYDKMKLEQTRINSSTQLDLA 60 Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120 +IK IEELK+D+PIRLARI+AQKVKSGVKW+DG LIRPLTT FWIIVYPLLVWWSVK Sbjct: 61 DIKYAIEELKVDQPIRLARIKAQKVKSGVKWIDGLNTLIRPLTTLFWIIVYPLLVWWSVK 120 Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 EG+F+ PL++LSPF QEIIACILGFWYTDKIVQKK+ Sbjct: 121 EGIFDRSPLSILSPFEQEIIACILGFWYTDKIVQKKR 157 >gi|315121924|ref|YP_004062413.1| hypothetical protein CKC_00870 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495326|gb|ADR51925.1| hypothetical protein CKC_00870 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 158 Score = 254 bits (649), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 123/157 (78%), Positives = 138/157 (87%) Query: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60 MIQSFLAGG+FRF LRF+PS FE+I D V EYL +KQSIEYDK+KLE K +SSTQLDLA Sbjct: 1 MIQSFLAGGIFRFALRFVPSVFEKIADGVLEYLMQKQSIEYDKMKLEQTKINSSTQLDLA 60 Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120 EIK GIEELK+DKPIRLARI+AQKVKSG+KW+DG ALIRPLTT FWIIVYPLLVWWSVK Sbjct: 61 EIKYGIEELKVDKPIRLARIKAQKVKSGIKWIDGVNALIRPLTTLFWIIVYPLLVWWSVK 120 Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 EG F+ PL +L+ F QEIIACILGFWYTDKIVQK++ Sbjct: 121 EGYFDKSPLAVLTLFEQEIIACILGFWYTDKIVQKRR 157 >gi|315122344|ref|YP_004062833.1| hypothetical protein CKC_02980 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495746|gb|ADR52345.1| hypothetical protein CKC_02980 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 125 Score = 191 bits (484), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 94/125 (75%), Positives = 110/125 (88%), Gaps = 4/125 (3%) Query: 35 KKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDG 94 +KQSIEYDK KLE+A+ STQLDLA+IK IEELK+D+PIRLARI+AQK KSG+KW+DG Sbjct: 2 QKQSIEYDKTKLELARG--STQLDLADIKYAIEELKVDQPIRLARIKAQKFKSGIKWIDG 59 Query: 95 FTALIRPLTTFFWIIVYPLLVWW--SVKEGMFNSDPLTLLSPFTQEIIACILGFWYTDKI 152 F ALIRPLTTFFWII+YPLLVW VKEG+F+ PL++LSPF Q+IIACILGFWYTDKI Sbjct: 60 FNALIRPLTTFFWIIIYPLLVWGIVCVKEGVFDRSPLSILSPFEQDIIACILGFWYTDKI 119 Query: 153 VQKKK 157 VQKK+ Sbjct: 120 VQKKR 124 >gi|315122770|ref|YP_004063259.1| hypothetical protein CKC_05125 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496172|gb|ADR52771.1| hypothetical protein CKC_05125 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 124 Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 90/122 (73%), Positives = 105/122 (86%) Query: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60 MIQSFL G +FRF LRFIPS FE+I D V EYL +KQSIEYDK+KLE+A+ +SSTQLDLA Sbjct: 1 MIQSFLVGEVFRFALRFIPSVFEKIADGVLEYLMQKQSIEYDKMKLELARINSSTQLDLA 60 Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120 +IK IEELK D+ IRLARI+AQKVKSG++W+DGF A +RPLT+ FWIIVYPLLVWWSVK Sbjct: 61 DIKLEIEELKADQLIRLARIKAQKVKSGIQWIDGFNAFVRPLTSLFWIIVYPLLVWWSVK 120 Query: 121 EG 122 G Sbjct: 121 GG 122 >gi|315122566|ref|YP_004063055.1| hypothetical protein CKC_04090 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495968|gb|ADR52567.1| hypothetical protein CKC_04090 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 130 Score = 182 bits (463), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 91/129 (70%), Positives = 111/129 (86%), Gaps = 7/129 (5%) Query: 35 KKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDG 94 +K+SIEY+K+KLE + SSTQLDLA+IK GIEELK+D+PIRLARI+AQ+VKSG++W+D Sbjct: 2 QKRSIEYEKMKLEQTRIQSSTQLDLADIKLGIEELKVDQPIRLARIKAQQVKSGIQWIDA 61 Query: 95 F----TALIRPLTTFFWIIVYPLLVWWS--VKEGMFNSDPLTLLSPFTQEIIACILGFWY 148 F ALIRPLTT FWII +PLLVWWS VKEG+F+ PL++LSPF Q+IIACILGFWY Sbjct: 62 FNALINALIRPLTTLFWII-FPLLVWWSMGVKEGIFDRSPLSILSPFEQDIIACILGFWY 120 Query: 149 TDKIVQKKK 157 TDKIVQKK+ Sbjct: 121 TDKIVQKKR 129 >gi|254780988|ref|YP_003065401.1| hypothetical protein CLIBASIA_04445 [Candidatus Liberibacter asiaticus str. psy62] gi|254040665|gb|ACT57461.1| hypothetical protein CLIBASIA_04445 [Candidatus Liberibacter asiaticus str. psy62] Length = 151 Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 79/158 (50%), Positives = 114/158 (72%), Gaps = 15/158 (9%) Query: 4 SFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIK 63 SFL G + RF ++F+PS F +++ EY+ K++SIE+D+L+LE+AK S+TQ+DL ++ Sbjct: 3 SFLTGSIARFFIKFVPSLF----NLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLKALE 58 Query: 64 AGIEELKIDKPIRLARIEAQ----KVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSV 119 + + P+RLAR++ Q + + K + F ALIRP TT FWII+YPLL+WW V Sbjct: 59 S-------ETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGV 111 Query: 120 KEGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 ++G DPLTLL+PFTQ+IIACILGFW+TD IVQ++K Sbjct: 112 EKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRK 149 >gi|315121790|ref|YP_004062279.1| hypothetical protein CKC_00200 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495192|gb|ADR51791.1| hypothetical protein CKC_00200 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 121 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 71/108 (65%), Positives = 84/108 (77%), Gaps = 2/108 (1%) Query: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60 M++SFLA GLFR LRFIPS FE+I D V EYL +KQSIEYDK KLE+A+ + STQLDLA Sbjct: 1 MMESFLASGLFRLALRFIPSVFEKIADGVLEYLMQKQSIEYDKTKLELARINGSTQLDLA 60 Query: 61 EIKAGIEELKIDKPIRLARIEAQKVK--SGVKWVDGFTALIRPLTTFF 106 +IK IEELK+D+ IRLARI+AQKVK SGVKW+DGF +L F Sbjct: 61 DIKYAIEELKVDQSIRLARIKAQKVKSGSGVKWIDGFDSLNSTSHNLF 108 >gi|315122303|ref|YP_004062792.1| hypothetical protein CKC_02775 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495705|gb|ADR52304.1| hypothetical protein CKC_02775 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 115 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 70/102 (68%), Positives = 84/102 (82%), Gaps = 5/102 (4%) Query: 19 PSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLA 78 PS FE+I D V EYL +KQSIEYDK+ LE+ + +SSTQLDLA+IK IEELK+D+ IRLA Sbjct: 14 PSVFEKIADGVLEYLMQKQSIEYDKMNLELPRINSSTQLDLADIKYAIEELKVDQSIRLA 73 Query: 79 RIEAQKVK--SGVKWVDGFTALIRPLTTFFWIIVYPLLVWWS 118 RI+AQKVK SGVKW+DGF ALIRPLTTFFWII++ +WS Sbjct: 74 RIKAQKVKNGSGVKWIDGFNALIRPLTTFFWIIIFR---YWS 112 >gi|315122634|ref|YP_004063123.1| hypothetical protein CKC_04430 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496036|gb|ADR52635.1| hypothetical protein CKC_04430 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 228 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 57/80 (71%), Positives = 69/80 (86%), Gaps = 2/80 (2%) Query: 29 VSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVK-- 86 +SE+L +K+ IEYDK KLE + S+TQLDLA+IK GIEELK+D+PIRLARI+AQKVK Sbjct: 131 ISEHLMQKRFIEYDKTKLEQTRIQSTTQLDLADIKLGIEELKVDQPIRLARIKAQKVKSS 190 Query: 87 SGVKWVDGFTALIRPLTTFF 106 SGVKW+DGF +LIRPLTTFF Sbjct: 191 SGVKWIDGFNSLIRPLTTFF 210 >gi|315122322|ref|YP_004062811.1| hypothetical protein CKC_02870 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495724|gb|ADR52323.1| hypothetical protein CKC_02870 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 55 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 41/47 (87%), Positives = 46/47 (97%) Query: 65 GIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVY 111 GIEELK+D+PIRLARI+AQKVKSGVKW+DGF ALIRPLTTFFWIIV+ Sbjct: 2 GIEELKVDQPIRLARIKAQKVKSGVKWIDGFNALIRPLTTFFWIIVF 48 >gi|315122323|ref|YP_004062812.1| hypothetical protein CKC_02875 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495725|gb|ADR52324.1| hypothetical protein CKC_02875 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 40 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 27/39 (69%), Positives = 34/39 (87%) Query: 119 VKEGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 +K G+F+ PL++LSPF Q+IIACILGFW TDKIVQKK+ Sbjct: 1 MKGGIFDRSPLSILSPFEQDIIACILGFWCTDKIVQKKR 39 >gi|17547913|ref|NP_521315.1| hypothetical protein RSc3194 [Ralstonia solanacearum GMI1000] gi|17430219|emb|CAD16982.1| hypothetical transmembrane protein [Ralstonia solanacearum GMI1000] Length = 160 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 20/156 (12%) Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65 LA GL ++L R G E + + +++E++KL+ + D A Sbjct: 16 LAPGLLKWLDRKGERGHELAM--------QDKALEFEKLRGAQRMAEIGASADAAWNTGA 67 Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLL----VWWSVKE 121 IE L+ I AQ K+GV+W D + +RP+ T+ ++++Y + S + Sbjct: 68 IEALRDS-------ITAQGEKTGVRWADALSTTVRPVVTYLFVLMYTGVKLSTFGGSAQA 120 Query: 122 GM-FNSDPLTLLSPFTQEIIACILGFWYTDKIVQKK 156 G+ F L S Q ++A IL FW+ ++ +++ Sbjct: 121 GVGFGPALLAAWSEADQALLAGILNFWFISRVWERR 156 >gi|315122321|ref|YP_004062810.1| hypothetical protein CKC_02865 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495723|gb|ADR52322.1| hypothetical protein CKC_02865 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 45 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 5/50 (10%) Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSST 55 + GGLF LRF PS + D V EYL +KQSIEYDK+K E + S+T Sbjct: 1 MQGGLFS-ALRFFPS----VFDGVLEYLMQKQSIEYDKMKPEQTRIQSAT 45 >gi|53803115|ref|YP_115083.1| hypothetical protein MCA2679 [Methylococcus capsulatus str. Bath] gi|53756876|gb|AAU91167.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath] Length = 158 Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust. Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 17/117 (14%) Query: 1 MIQSFLAG---GLFRF---LLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSS 54 MI++ L G G FR +L+++ ER E + +++E++KL+ + Sbjct: 1 MIETLLGGFLGGAFRLAPEILKWLDRKGER----GHELAMQDKALEFEKLRGAQRMAEIG 56 Query: 55 TQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVY 111 D A IE L+ + Q K+GV+W D ++ +RP+ T++++ +Y Sbjct: 57 ASADAAWNSGAIEALRDA-------VRTQGEKTGVRWADALSSSVRPVITYWFMALY 106 >gi|255020358|ref|ZP_05292426.1| hypothetical protein ACA_2176 [Acidithiobacillus caldus ATCC 51756] gi|254970278|gb|EET27772.1| hypothetical protein ACA_2176 [Acidithiobacillus caldus ATCC 51756] Length = 158 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 7/90 (7%) Query: 22 FERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIE 81 +R + E + +++E++KL+ + D A IE L+ + Sbjct: 24 LDRKGERSHELAMQDKALEFEKLRGAQRMAEIGAGADAAWNVGAIETLR-------EAVA 76 Query: 82 AQKVKSGVKWVDGFTALIRPLTTFFWIIVY 111 AQ +SGV+W D +A +RP+ T++++ +Y Sbjct: 77 AQGQRSGVRWADALSASVRPVITYWFMALY 106 >gi|299067556|emb|CBJ38758.1| conserved protein of unknown function [Ralstonia solanacearum CMR15] Length = 158 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 29/144 (20%), Positives = 59/144 (40%), Gaps = 22/144 (15%) Query: 22 FERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIE 81 +R + E + +++E++KL+ + D A ++ L+ I Sbjct: 24 LDRKGERGHELAMQDKALEFEKLRGAQRMAEIGASADAAWNAGALQALRDS-------IS 76 Query: 82 AQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVKEGMFNSD----------PLTL 131 AQ SGV WVD + +RP+ T++++ +Y + K F + L Sbjct: 77 AQGQTSGVPWVDALSISVRPVITYWFMALYC-----AAKTAAFAGELTAGAGWGAATLQA 131 Query: 132 LSPFTQEIIACILGFWYTDKIVQK 155 + Q + A +L FW+ ++ + Sbjct: 132 WTEADQALWAGVLNFWFVGRVFDR 155 >gi|161525480|ref|YP_001580492.1| hypothetical protein Bmul_2310 [Burkholderia multivorans ATCC 17616] gi|189349791|ref|YP_001945419.1| hypothetical membrane protein [Burkholderia multivorans ATCC 17616] gi|160342909|gb|ABX15995.1| conserved hypothetical protein [Burkholderia multivorans ATCC 17616] gi|189333813|dbj|BAG42883.1| hypothetical membrane protein [Burkholderia multivorans ATCC 17616] Length = 158 Score = 38.1 bits (87), Expect = 0.46, Method: Compositional matrix adjust. Identities = 31/144 (21%), Positives = 62/144 (43%), Gaps = 22/144 (15%) Query: 22 FERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIE 81 +R + E + +++E++KL+ + D A IE L+ + Sbjct: 24 LDRKGERSHELAMQDKALEFEKLRGASRMAEIGASADSAWNTGAIEALRES-------VA 76 Query: 82 AQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVKEGMF------NSD-PLTLLSP 134 AQ +S V+W D + +RP+ T++++ +Y + K F SD +L Sbjct: 77 AQGQRSRVRWADALSVSVRPVITYWFMALYC-----AAKTAAFVGAINGGSDWGAAILHA 131 Query: 135 FT---QEIIACILGFWYTDKIVQK 155 +T Q + A +L FW+ ++ + Sbjct: 132 WTDADQALWAGVLNFWFLGRVFDR 155 >gi|17545601|ref|NP_519003.1| transmembrane protein [Ralstonia solanacearum GMI1000] gi|17427894|emb|CAD14584.1| putative transmembrane protein [Ralstonia solanacearum GMI1000] Length = 158 Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust. Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 22/135 (16%) Query: 31 EYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVK 90 E + +++E++KL+ + D A IE L+ I AQ SGV Sbjct: 33 ELAMQDKALEFEKLRGAQRMAEIGASADAAWNTGAIEALRDS-------ITAQGQTSGVP 85 Query: 91 WVDGFTALIRPLTTFFWIIVYPLLVWWSVKEGMF----------NSDPLTLLSPFTQEII 140 WVD + +RP+ T++++ +Y + K F ++ + + Q + Sbjct: 86 WVDALSISVRPVITYWFMGLYC-----AAKTAAFAGVLTAGAGWSTATVQAWTEADQALW 140 Query: 141 ACILGFWYTDKIVQK 155 A +L FW+ ++ + Sbjct: 141 AGVLNFWFLGRVFDR 155 >gi|158320695|ref|YP_001513202.1| alanyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] gi|205829976|sp|A8MGI3|SYA_ALKOO RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA ligase; Short=AlaRS gi|158140894|gb|ABW19206.1| alanyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] Length = 880 Score = 37.4 bits (85), Expect = 0.78, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 9/74 (12%) Query: 23 ERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGI-------EELKIDKPI 75 ER+ D+V E TK++ E +KLK ++A N + LD A + GI E ++D Sbjct: 732 ERVADLVHE--TKEKDREINKLKSQLASNSTGDILDKATVVGGINVVVEVLENQEMDDLR 789 Query: 76 RLARIEAQKVKSGV 89 ++ + +K+ SGV Sbjct: 790 KIGDVLKEKIGSGV 803 >gi|242796781|ref|XP_002482872.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500] gi|218719460|gb|EED18880.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500] Length = 450 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 19/84 (22%) Query: 35 KKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRL--ARIEAQKVKSGVKWV 92 KK + D+ KND +T L LA ++AG ++KID P+ L AR+ Sbjct: 41 KKSASRVDRYHSNRPKNDDTTSLSLAAVEAG--QVKIDDPVELFSARL------------ 86 Query: 93 DGFTALIRPLTTFFWIIVYPLLVW 116 A RP++TF P+ W Sbjct: 87 ---AAASRPVSTFTEGSRLPVKDW 107 >gi|300689969|ref|YP_003750964.1| hypothetical protein RPSI07_0266 [Ralstonia solanacearum PSI07] gi|299077029|emb|CBJ49644.1| conserved protein of unknown function [Ralstonia solanacearum PSI07] Length = 158 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 22/135 (16%) Query: 31 EYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVK 90 E + +++E++KL+ + D A IE L+ I Q SGV Sbjct: 33 ELAMQDKALEFEKLRGAQRMAEIGASADAAWNTGAIEALRDS-------ISVQGQTSGVP 85 Query: 91 WVDGFTALIRPLTTFFWIIVYPLLVWWSVKEGMF----------NSDPLTLLSPFTQEII 140 WVD + +RP+ T++++ +Y + K F + + + Q + Sbjct: 86 WVDALSISVRPVITYWFMGLYC-----AAKTAAFAGVLTAGAGWGAATVQAWTEADQALW 140 Query: 141 ACILGFWYTDKIVQK 155 A +L FW+ ++ + Sbjct: 141 AGVLNFWFLGRVFDR 155 >gi|152982387|ref|YP_001354417.1| hypothetical protein mma_2727 [Janthinobacterium sp. Marseille] gi|151282464|gb|ABR90874.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 158 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 18/82 (21%), Positives = 41/82 (50%), Gaps = 7/82 (8%) Query: 30 SEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGV 89 E + +++E++K++ ++ D A IE L+ + Q K+GV Sbjct: 32 HELAMQDKALEFEKIRGAQRMDEIGAGADAAWNVGAIETLR-------DAVRTQGEKTGV 84 Query: 90 KWVDGFTALIRPLTTFFWIIVY 111 +W D ++ +RP+ T++++ +Y Sbjct: 85 RWADALSSSVRPVITYWFMALY 106 >gi|300697182|ref|YP_003747843.1| hypothetical protein RCFBP_mp20007 [Ralstonia solanacearum CFBP2957] gi|299073906|emb|CBJ53437.1| conserved protein of unknown function [Ralstonia solanacearum CFBP2957] Length = 160 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 22/135 (16%) Query: 31 EYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVK 90 E + +++E+++++ + D A IE L+ I AQ SGV Sbjct: 33 ELAMQDKALEFERVRGAQRMAEIGASADAAWNTGAIEALRDS-------ITAQGQTSGVP 85 Query: 91 WVDGFTALIRPLTTFFWIIVYPLLVWWSVKEGMFN----------SDPLTLLSPFTQEII 140 W D + +RP+ T+ ++ +Y + K +F + + S Q + Sbjct: 86 WADALSITVRPVITYSFMALYC-----AAKAAVFTGAITAGAGWITATVHAWSEADQALW 140 Query: 141 ACILGFWYTDKIVQK 155 A +L FW+ + + K Sbjct: 141 AGVLNFWFLGRTLDK 155 >gi|157375169|ref|YP_001473769.1| crossover junction endodeoxyribonuclease [Shewanella sediminis HAW-EB3] gi|189046082|sp|A8FUW8|RUVC_SHESH RecName: Full=Crossover junction endodeoxyribonuclease ruvC; AltName: Full=Holliday junction nuclease ruvC; AltName: Full=Holliday junction resolvase ruvC gi|157317543|gb|ABV36641.1| Crossover junction endodeoxyribonuclease [Shewanella sediminis HAW-EB3] Length = 173 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 3 QSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKN-DSSTQLDLAE 61 Q++L G R +P ++I D VSE + + Q E+ ++ MAKN DS+ +L A Sbjct: 26 QTYLGSGCIRTASDDLPYRLKQIFDGVSEIIRQYQPDEFAIERVFMAKNADSALKLGQAR 85 Query: 62 IKAGIEELKIDKPIRLARIEAQKVKSGV 89 A + D P+ A A ++KS V Sbjct: 86 GAAIVAATNADLPV--AEYSATQIKSAV 111 >gi|207725396|ref|YP_002255792.1| hypothetical protein RSMK00245 [Ralstonia solanacearum MolK2] gi|206590632|emb|CAQ37594.1| conserved hypothetical protein [Ralstonia solanacearum MolK2] Length = 160 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 22/135 (16%) Query: 31 EYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVK 90 E + +++E++K++ + D A IE L+ I AQ SGV Sbjct: 33 ELAMQDKALEFEKVRGAQRMAEIGASADAAWNTGAIEALRDS-------ITAQGQTSGVP 85 Query: 91 WVDGFTALIRPLTTFFWIIVYPLLVWWSVKEGMFN----------SDPLTLLSPFTQEII 140 W D + +RP+ T+ ++ +Y + K +F + + + Q + Sbjct: 86 WADALSITVRPVITYSFMALYC-----AAKAAVFTGAITAGAGWITATVHAWTEADQALW 140 Query: 141 ACILGFWYTDKIVQK 155 A +L FW+ + + K Sbjct: 141 AGVLNFWFLGRTLDK 155 >gi|152980935|ref|YP_001354477.1| hypothetical protein mma_2787 [Janthinobacterium sp. Marseille] gi|151281012|gb|ABR89422.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 158 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 7/82 (8%) Query: 30 SEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGV 89 E + +++E++KL+ ++ D A IE L+ + Q K+GV Sbjct: 32 HELAMQDKALEFEKLRGAQRLSEIGAGADAAWNVGAIETLR-------EAVRTQGEKTGV 84 Query: 90 KWVDGFTALIRPLTTFFWIIVY 111 +W D + +RP+ T++++ +Y Sbjct: 85 RWADALSISVRPVITYWFMALY 106 >gi|308161874|gb|EFO64306.1| IFT complex B [Giardia lamblia P15] Length = 672 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 27/40 (67%) Query: 40 EYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLAR 79 E+D+LK E+ +++ + + EI+A EELK + P R+A+ Sbjct: 595 EFDRLKREITSENNACKTQMMEIRAKQEELKCNLPNRMAQ 634 >gi|159119412|ref|XP_001709924.1| IFT complex B [Giardia lamblia ATCC 50803] gi|157438042|gb|EDO82250.1| IFT complex B [Giardia lamblia ATCC 50803] Length = 672 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 27/40 (67%) Query: 40 EYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLAR 79 E+D+LK E+ +++ + + EI+A EELK + P R+A+ Sbjct: 595 EFDRLKREITSENNACKTQMMEIRAKQEELKCNLPNRMAQ 634 >gi|115390877|ref|XP_001212943.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114193867|gb|EAU35567.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1183 Score = 34.7 bits (78), Expect = 4.6, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 8/73 (10%) Query: 10 LFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDL--------AE 61 L + RF FE+IVD+V ++T + S ++ + + + AKND+S AE Sbjct: 602 LVSWFSRFSVGQFEKIVDLVGSFVTYRLSRQHGRKRSQTAKNDNSLVPSFSSAAGNTPAE 661 Query: 62 IKAGIEELKIDKP 74 + A I +KP Sbjct: 662 LHAAINGRSSNKP 674 >gi|300697168|ref|YP_003747829.1| hypothetical protein RCFBP_mp10636 [Ralstonia solanacearum CFBP2957] gi|299073892|emb|CBJ53423.1| conserved protein of unknown function (fragment) [Ralstonia solanacearum CFBP2957] Length = 123 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 25/128 (19%), Positives = 53/128 (41%), Gaps = 12/128 (9%) Query: 35 KKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDG 94 + +++E +K++ + D A IE L+ I AQ SGV W D Sbjct: 2 QDKALELEKVRGAQRMAEIGASADAAWNTGAIEALRDS-------ITAQGQTSGVPWADA 54 Query: 95 FTALIRPLTTFFWIIVYPLLVWWS-----VKEGMFNSDPLTLLSPFTQEIIACILGFWYT 149 + +RP+ T++++ +Y + + + L + Q + A +L FW+ Sbjct: 55 LSITVRPVITYWFMALYCAAKTAAFAGAITAGAGWGAATLQAWTEADQALWAGVLNFWFL 114 Query: 150 DKIVQKKK 157 ++ + + Sbjct: 115 GRVFDRAR 122 >gi|308159059|gb|EFO61612.1| Hypothetical protein GLP15_5086 [Giardia lamblia P15] Length = 3411 Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 32/54 (59%) Query: 16 RFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEEL 69 R +P+G++ I+D+ ++Y+ + Y+ + ++ ND +L L IKA I ++ Sbjct: 2479 RVLPTGYKNIMDLQTDYVFETNYKYYEHIAIQSTINDRVYRLGLMPIKAVIRDI 2532 >gi|257875918|ref|ZP_05655571.1| glutamyl-tRNA synthetase [Enterococcus casseliflavus EC20] gi|257810084|gb|EEV38904.1| glutamyl-tRNA synthetase [Enterococcus casseliflavus EC20] Length = 485 Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 12/114 (10%) Query: 5 FLAGGLFRF--LLRFIPSGFERI------VDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQ 56 +L +F F LL + P G E I + + K +D KLE N Q Sbjct: 273 YLPDAMFNFIALLGWSPVGEEEIFSQEELIKIFDPERLSKSPAAFDAKKLEWVNNQYMKQ 332 Query: 57 LDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIV 110 +DL E+ A + + ++ RIE + W+ +L +P +F IV Sbjct: 333 MDLDELTA----MCVPYLVKAGRIEETLTEEKAAWLKKIVSLYQPQMSFAAQIV 382 >gi|325567617|ref|ZP_08144284.1| glutamate--tRNA ligase [Enterococcus casseliflavus ATCC 12755] gi|325159050|gb|EGC71196.1| glutamate--tRNA ligase [Enterococcus casseliflavus ATCC 12755] Length = 485 Score = 34.3 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 12/114 (10%) Query: 5 FLAGGLFRF--LLRFIPSGFERI------VDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQ 56 +L +F F LL + P G E I + + K +D KLE N Q Sbjct: 273 YLPDAMFNFIALLGWSPVGEEEIFSQEELIKIFDPERLSKSPAAFDAKKLEWVNNQYMKQ 332 Query: 57 LDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIV 110 +DL E+ A + + ++ RIE + W+ +L +P +F IV Sbjct: 333 MDLDELTA----MCVPYLVKAGRIEETLTEEKAAWLKKIVSLYQPQMSFAAQIV 382 >gi|330794833|ref|XP_003285481.1| hypothetical protein DICPUDRAFT_149347 [Dictyostelium purpureum] gi|325084572|gb|EGC37997.1| hypothetical protein DICPUDRAFT_149347 [Dictyostelium purpureum] Length = 634 Score = 33.9 bits (76), Expect = 7.3, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 26/112 (23%) Query: 27 DVVSEYLTKKQSIEYD-KLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIR---LARIEA 82 D+ + L+KKQ E+ L ++ +N + L IK LKID+P+R LA +E Sbjct: 4 DIYNSLLSKKQQEEHAWSLNEDILENQAQLFFSLKSIKG----LKIDEPVRIYCLASLEK 59 Query: 83 QKV---------KSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVKEGMFN 125 Q + +S ++W +G+T F +I ++ S+ +G FN Sbjct: 60 QSIQTSSIIVRDQSPIEWNEGYT---------FDVISSKSVLALSIWQGNFN 102 >gi|281358725|ref|ZP_06245202.1| hypothetical protein Vvad_PD0197 [Victivallis vadensis ATCC BAA-548] gi|281314851|gb|EFA98887.1| hypothetical protein Vvad_PD0197 [Victivallis vadensis ATCC BAA-548] Length = 329 Score = 33.9 bits (76), Expect = 8.6, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 6/112 (5%) Query: 31 EYLTKKQSIEYDKLKLEMAKNDSSTQLDLAE--IKAGIEELKIDKPIRLARIEAQKVKS- 87 Y+T +S+ D++KL + D+ + L E + +E LK D IRLA +EA Sbjct: 130 HYVTADRSVPEDRIKLALCYLDADSVLATEEPYLAHFLEGLKTDSAIRLAAVEAPAGNPV 189 Query: 88 --GVKWVDGFTALIRPLTTFFWIIVYPL-LVWWSVKEGMFNSDPLTLLSPFT 136 G V TA + + F + L V W + G + LTL + T Sbjct: 190 IWGFLNVRSLTAGNKRKASLFQVFFRDLRRVVWEIASGGEHGGALTLSATGT 241 >gi|116672163|ref|YP_833096.1| LysR family transcriptional regulator [Arthrobacter sp. FB24] gi|116612272|gb|ABK04996.1| transcriptional regulator, LysR family [Arthrobacter sp. FB24] Length = 307 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 8/93 (8%) Query: 28 VVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKS 87 VS+ LTK + L + K T LA +AG EE++ + ARIE + Sbjct: 33 AVSQQLTKLEDETGHALVVRTPKGSVLTPAGLAVAEAG-EEIERALSVARARIEGGAKVA 91 Query: 88 GVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120 GV V GFT+ +R +V P L W + Sbjct: 92 GVVRVGGFTSFVR-------TVVIPRLPGWRTQ 117 >gi|307149659|ref|YP_003891029.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822] gi|306986788|gb|ADN18664.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822] Length = 568 Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 7/61 (11%) Query: 5 FLAGGLFRFLLRFIPSGFE-------RIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQL 57 +L G LF + FIPS F ++D+V++YL K ++ + + L+ K ++ TQL Sbjct: 177 YLIGELFGLVENFIPSPFNSLPTLAGNVLDLVAKYLGKDLTLAFKRRGLKKEKFEAITQL 236 Query: 58 D 58 D Sbjct: 237 D 237 Searching..................................................done Results from round 2 >gi|315122886|ref|YP_004063375.1| hypothetical protein CKC_05710 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496288|gb|ADR52887.1| hypothetical protein CKC_05710 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 158 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 123/157 (78%), Positives = 139/157 (88%) Query: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60 MIQSFLAGGLFRF LRF+PS FE+I D V EYL +KQSIEYDK+KLE + +SSTQLDLA Sbjct: 1 MIQSFLAGGLFRFALRFVPSVFEKIADGVLEYLMQKQSIEYDKMKLEQTRINSSTQLDLA 60 Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120 +IK IEELK+D+PIRLARI+AQKVKSGVKW+DG LIRPLTT FWIIVYPLLVWWSVK Sbjct: 61 DIKYAIEELKVDQPIRLARIKAQKVKSGVKWIDGLNTLIRPLTTLFWIIVYPLLVWWSVK 120 Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 EG+F+ PL++LSPF QEIIACILGFWYTDKIVQKK+ Sbjct: 121 EGIFDRSPLSILSPFEQEIIACILGFWYTDKIVQKKR 157 >gi|315121924|ref|YP_004062413.1| hypothetical protein CKC_00870 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495326|gb|ADR51925.1| hypothetical protein CKC_00870 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 158 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 123/157 (78%), Positives = 138/157 (87%) Query: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60 MIQSFLAGG+FRF LRF+PS FE+I D V EYL +KQSIEYDK+KLE K +SSTQLDLA Sbjct: 1 MIQSFLAGGIFRFALRFVPSVFEKIADGVLEYLMQKQSIEYDKMKLEQTKINSSTQLDLA 60 Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120 EIK GIEELK+DKPIRLARI+AQKVKSG+KW+DG ALIRPLTT FWIIVYPLLVWWSVK Sbjct: 61 EIKYGIEELKVDKPIRLARIKAQKVKSGIKWIDGVNALIRPLTTLFWIIVYPLLVWWSVK 120 Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 EG F+ PL +L+ F QEIIACILGFWYTDKIVQK++ Sbjct: 121 EGYFDKSPLAVLTLFEQEIIACILGFWYTDKIVQKRR 157 >gi|254781199|ref|YP_003065612.1| hypothetical protein CLIBASIA_05530 [Candidatus Liberibacter asiaticus str. psy62] gi|254040876|gb|ACT57672.1| hypothetical protein CLIBASIA_05530 [Candidatus Liberibacter asiaticus str. psy62] gi|317120664|gb|ADV02487.1| hypothetical protein SC1_gp005 [Liberibacter phage SC1] gi|317120808|gb|ADV02629.1| hypothetical protein SC1_gp005 [Candidatus Liberibacter asiaticus] Length = 157 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 157/157 (100%), Positives = 157/157 (100%) Query: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA Sbjct: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60 Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK Sbjct: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120 Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK Sbjct: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 >gi|317120748|gb|ADV02570.1| hypothetical protein SC2_gp250 [Liberibacter phage SC2] gi|317120762|gb|ADV02583.1| hypothetical protein SC2_gp250 [Candidatus Liberibacter asiaticus] Length = 157 Score = 240 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 127/157 (80%), Positives = 142/157 (90%) Query: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60 MIQSFLAGGLFRFLLRFIPS FERIVDVVSEYLTKKQSIEYDK KLE AK DSS QLDLA Sbjct: 1 MIQSFLAGGLFRFLLRFIPSSFERIVDVVSEYLTKKQSIEYDKWKLETAKIDSSLQLDLA 60 Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120 +IK GIEELK DKPI+LARI+AQ +KSGVKW+D F L+RPLTT FWIIVYP++VWWSVK Sbjct: 61 DIKYGIEELKADKPIKLARIKAQNIKSGVKWIDSFNTLVRPLTTLFWIIVYPMMVWWSVK 120 Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 EG+F+ PL++LSPF QEIIACILGFW+TDKIVQK++ Sbjct: 121 EGIFDKSPLSILSPFEQEIIACILGFWFTDKIVQKRR 157 >gi|317120705|gb|ADV02527.1| hypothetical protein SC2_gp005 [Liberibacter phage SC2] gi|317120766|gb|ADV02587.1| hypothetical protein SC2_gp005 [Candidatus Liberibacter asiaticus] Length = 158 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 125/156 (80%), Positives = 144/156 (92%) Query: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60 MIQSFLAGGLFRFLLRFIPS FERIVDVVSEYLTKKQS+EY+K+++E+AK ++STQ++L Sbjct: 1 MIQSFLAGGLFRFLLRFIPSSFERIVDVVSEYLTKKQSLEYNKMQIELAKINTSTQVNLE 60 Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120 EIK GIEELK DKPIRLAR+++Q VK +KW++GF ALIRPLTT FWI+VYPLLVWWSVK Sbjct: 61 EIKYGIEELKADKPIRLARVKSQNVKIDIKWINGFNALIRPLTTLFWIVVYPLLVWWSVK 120 Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKK 156 E MF+ DPLTLLSPFTQEIIACILGFWYTDKIVQK+ Sbjct: 121 ERMFSIDPLTLLSPFTQEIIACILGFWYTDKIVQKR 156 >gi|315122344|ref|YP_004062833.1| hypothetical protein CKC_02980 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495746|gb|ADR52345.1| hypothetical protein CKC_02980 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 125 Score = 188 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 94/126 (74%), Positives = 110/126 (87%), Gaps = 4/126 (3%) Query: 34 TKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVD 93 +KQSIEYDK KLE+A+ STQLDLA+IK IEELK+D+PIRLARI+AQK KSG+KW+D Sbjct: 1 MQKQSIEYDKTKLELAR--GSTQLDLADIKYAIEELKVDQPIRLARIKAQKFKSGIKWID 58 Query: 94 GFTALIRPLTTFFWIIVYPLLVWW--SVKEGMFNSDPLTLLSPFTQEIIACILGFWYTDK 151 GF ALIRPLTTFFWII+YPLLVW VKEG+F+ PL++LSPF Q+IIACILGFWYTDK Sbjct: 59 GFNALIRPLTTFFWIIIYPLLVWGIVCVKEGVFDRSPLSILSPFEQDIIACILGFWYTDK 118 Query: 152 IVQKKK 157 IVQKK+ Sbjct: 119 IVQKKR 124 >gi|315122770|ref|YP_004063259.1| hypothetical protein CKC_05125 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496172|gb|ADR52771.1| hypothetical protein CKC_05125 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 124 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 90/122 (73%), Positives = 105/122 (86%) Query: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60 MIQSFL G +FRF LRFIPS FE+I D V EYL +KQSIEYDK+KLE+A+ +SSTQLDLA Sbjct: 1 MIQSFLVGEVFRFALRFIPSVFEKIADGVLEYLMQKQSIEYDKMKLELARINSSTQLDLA 60 Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120 +IK IEELK D+ IRLARI+AQKVKSG++W+DGF A +RPLT+ FWIIVYPLLVWWSVK Sbjct: 61 DIKLEIEELKADQLIRLARIKAQKVKSGIQWIDGFNAFVRPLTSLFWIIVYPLLVWWSVK 120 Query: 121 EG 122 G Sbjct: 121 GG 122 >gi|254780988|ref|YP_003065401.1| hypothetical protein CLIBASIA_04445 [Candidatus Liberibacter asiaticus str. psy62] gi|254040665|gb|ACT57461.1| hypothetical protein CLIBASIA_04445 [Candidatus Liberibacter asiaticus str. psy62] Length = 151 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 80/158 (50%), Positives = 113/158 (71%), Gaps = 15/158 (9%) Query: 4 SFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIK 63 SFL G + RF ++F+PS F +++ EY+ K++SIE+D+L+LE+AK S+TQ+DL Sbjct: 3 SFLTGSIARFFIKFVPSLF----NLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLK--- 55 Query: 64 AGIEELKIDKPIRLARIEAQ----KVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSV 119 L+ + P+RLAR++ Q + + K + F ALIRP TT FWII+YPLL+WW V Sbjct: 56 ----ALESETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGV 111 Query: 120 KEGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 ++G DPLTLL+PFTQ+IIACILGFW+TD IVQ++K Sbjct: 112 EKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRK 149 >gi|315122566|ref|YP_004063055.1| hypothetical protein CKC_04090 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495968|gb|ADR52567.1| hypothetical protein CKC_04090 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 130 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 91/130 (70%), Positives = 111/130 (85%), Gaps = 7/130 (5%) Query: 34 TKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVD 93 +K+SIEY+K+KLE + SSTQLDLA+IK GIEELK+D+PIRLARI+AQ+VKSG++W+D Sbjct: 1 MQKRSIEYEKMKLEQTRIQSSTQLDLADIKLGIEELKVDQPIRLARIKAQQVKSGIQWID 60 Query: 94 GF----TALIRPLTTFFWIIVYPLLVWWS--VKEGMFNSDPLTLLSPFTQEIIACILGFW 147 F ALIRPLTT FWII +PLLVWWS VKEG+F+ PL++LSPF Q+IIACILGFW Sbjct: 61 AFNALINALIRPLTTLFWII-FPLLVWWSMGVKEGIFDRSPLSILSPFEQDIIACILGFW 119 Query: 148 YTDKIVQKKK 157 YTDKIVQKK+ Sbjct: 120 YTDKIVQKKR 129 >gi|315121790|ref|YP_004062279.1| hypothetical protein CKC_00200 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495192|gb|ADR51791.1| hypothetical protein CKC_00200 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 121 Score = 150 bits (379), Expect = 5e-35, Method: Composition-based stats. Identities = 71/108 (65%), Positives = 84/108 (77%), Gaps = 2/108 (1%) Query: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60 M++SFLA GLFR LRFIPS FE+I D V EYL +KQSIEYDK KLE+A+ + STQLDLA Sbjct: 1 MMESFLASGLFRLALRFIPSVFEKIADGVLEYLMQKQSIEYDKTKLELARINGSTQLDLA 60 Query: 61 EIKAGIEELKIDKPIRLARIEAQKVK--SGVKWVDGFTALIRPLTTFF 106 +IK IEELK+D+ IRLARI+AQKVK SGVKW+DGF +L F Sbjct: 61 DIKYAIEELKVDQSIRLARIKAQKVKSGSGVKWIDGFDSLNSTSHNLF 108 >gi|17547913|ref|NP_521315.1| hypothetical protein RSc3194 [Ralstonia solanacearum GMI1000] gi|17430219|emb|CAD16982.1| hypothetical transmembrane protein [Ralstonia solanacearum GMI1000] Length = 160 Score = 147 bits (370), Expect = 5e-34, Method: Composition-based stats. Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 20/156 (12%) Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65 LA GL ++L R G E + +++E++KL+ + D A Sbjct: 16 LAPGLLKWLDRKGERGHELA--------MQDKALEFEKLRGAQRMAEIGASADAAWNTGA 67 Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLL----VWWSVKE 121 IE L+ I AQ K+GV+W D + +RP+ T+ ++++Y + S + Sbjct: 68 IEALRDS-------ITAQGEKTGVRWADALSTTVRPVVTYLFVLMYTGVKLSTFGGSAQA 120 Query: 122 GM-FNSDPLTLLSPFTQEIIACILGFWYTDKIVQKK 156 G+ F L S Q ++A IL FW+ ++ +++ Sbjct: 121 GVGFGPALLAAWSEADQALLAGILNFWFISRVWERR 156 >gi|315122303|ref|YP_004062792.1| hypothetical protein CKC_02775 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495705|gb|ADR52304.1| hypothetical protein CKC_02775 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 115 Score = 140 bits (352), Expect = 8e-32, Method: Composition-based stats. Identities = 70/102 (68%), Positives = 84/102 (82%), Gaps = 5/102 (4%) Query: 19 PSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLA 78 PS FE+I D V EYL +KQSIEYDK+ LE+ + +SSTQLDLA+IK IEELK+D+ IRLA Sbjct: 14 PSVFEKIADGVLEYLMQKQSIEYDKMNLELPRINSSTQLDLADIKYAIEELKVDQSIRLA 73 Query: 79 RIEAQKVK--SGVKWVDGFTALIRPLTTFFWIIVYPLLVWWS 118 RI+AQKVK SGVKW+DGF ALIRPLTTFFWII++ +WS Sbjct: 74 RIKAQKVKNGSGVKWIDGFNALIRPLTTFFWIIIFR---YWS 112 >gi|315122634|ref|YP_004063123.1| hypothetical protein CKC_04430 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496036|gb|ADR52635.1| hypothetical protein CKC_04430 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 228 Score = 119 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 57/80 (71%), Positives = 69/80 (86%), Gaps = 2/80 (2%) Query: 29 VSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVK-- 86 +SE+L +K+ IEYDK KLE + S+TQLDLA+IK GIEELK+D+PIRLARI+AQKVK Sbjct: 131 ISEHLMQKRFIEYDKTKLEQTRIQSTTQLDLADIKLGIEELKVDQPIRLARIKAQKVKSS 190 Query: 87 SGVKWVDGFTALIRPLTTFF 106 SGVKW+DGF +LIRPLTTFF Sbjct: 191 SGVKWIDGFNSLIRPLTTFF 210 >gi|53803115|ref|YP_115083.1| hypothetical protein MCA2679 [Methylococcus capsulatus str. Bath] gi|53756876|gb|AAU91167.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath] Length = 158 Score = 107 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 63/157 (40%), Gaps = 20/157 (12%) Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65 LA + ++L R G E + +++E++KL+ + D A Sbjct: 16 LAPEILKWLDRKGERGHELA--------MQDKALEFEKLRGAQRMAEIGASADAAWNSGA 67 Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVY-----PLLVWWSVK 120 IE L+ + Q K+GV+W D ++ +RP+ T++++ +Y Sbjct: 68 IEALRDA-------VRTQGEKTGVRWADALSSSVRPVITYWFMALYCAAKTAAFAAAVTA 120 Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 + L + Q + A +L FW+ ++ + + Sbjct: 121 GAGWGVAILHAWTEADQALWAGVLNFWFLGRVFDRGR 157 >gi|299067556|emb|CBJ38758.1| conserved protein of unknown function [Ralstonia solanacearum CMR15] Length = 158 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 65/157 (41%), Gaps = 20/157 (12%) Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65 LA L ++L R G E + +++E++KL+ + D A Sbjct: 16 LAPELLKWLDRKGERGHELA--------MQDKALEFEKLRGAQRMAEIGASADAAWNAGA 67 Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVY----PLLVWWSVKE 121 ++ L+ I AQ SGV WVD + +RP+ T++++ +Y + Sbjct: 68 LQALRDS-------ISAQGQTSGVPWVDALSISVRPVITYWFMALYCAAKTAAFAGELTA 120 Query: 122 GM-FNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 G + + L + Q + A +L FW+ ++ + + Sbjct: 121 GAGWGAATLQAWTEADQALWAGVLNFWFVGRVFDRVR 157 >gi|300697182|ref|YP_003747843.1| hypothetical protein RCFBP_mp20007 [Ralstonia solanacearum CFBP2957] gi|299073906|emb|CBJ53437.1| conserved protein of unknown function [Ralstonia solanacearum CFBP2957] Length = 160 Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 64/155 (41%), Gaps = 20/155 (12%) Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65 LA + ++L R G E + +++E+++++ + D A Sbjct: 16 LAPEILKWLDRKGERGHELA--------MQDKALEFERVRGAQRMAEIGASADAAWNTGA 67 Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVY----PLLVWWSVKE 121 IE L+ I AQ SGV W D + +RP+ T+ ++ +Y + ++ Sbjct: 68 IEALRDS-------ITAQGQTSGVPWADALSITVRPVITYSFMALYCAAKAAVFTGAITA 120 Query: 122 GM-FNSDPLTLLSPFTQEIIACILGFWYTDKIVQK 155 G + + + S Q + A +L FW+ + + K Sbjct: 121 GAGWITATVHAWSEADQALWAGVLNFWFLGRTLDK 155 >gi|207725396|ref|YP_002255792.1| hypothetical protein RSMK00245 [Ralstonia solanacearum MolK2] gi|206590632|emb|CAQ37594.1| conserved hypothetical protein [Ralstonia solanacearum MolK2] Length = 160 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 64/155 (41%), Gaps = 20/155 (12%) Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65 LA + ++L R G E + +++E++K++ + D A Sbjct: 16 LAPEILKWLDRKGERGHELA--------MQDKALEFEKVRGAQRMAEIGASADAAWNTGA 67 Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVY----PLLVWWSVKE 121 IE L+ I AQ SGV W D + +RP+ T+ ++ +Y + ++ Sbjct: 68 IEALRDS-------ITAQGQTSGVPWADALSITVRPVITYSFMALYCAAKAAVFTGAITA 120 Query: 122 GM-FNSDPLTLLSPFTQEIIACILGFWYTDKIVQK 155 G + + + + Q + A +L FW+ + + K Sbjct: 121 GAGWITATVHAWTEADQALWAGVLNFWFLGRTLDK 155 >gi|17545601|ref|NP_519003.1| transmembrane protein [Ralstonia solanacearum GMI1000] gi|17427894|emb|CAD14584.1| putative transmembrane protein [Ralstonia solanacearum GMI1000] Length = 158 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 66/157 (42%), Gaps = 20/157 (12%) Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65 LA + +++ R G E + +++E++KL+ + D A Sbjct: 16 LAPEILKWIDRKGERGHELA--------MQDKALEFEKLRGAQRMAEIGASADAAWNTGA 67 Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVY----PLLVWWSVKE 121 IE L+ I AQ SGV WVD + +RP+ T++++ +Y + Sbjct: 68 IEALRDS-------ITAQGQTSGVPWVDALSISVRPVITYWFMGLYCAAKTAAFAGVLTA 120 Query: 122 GM-FNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 G +++ + + Q + A +L FW+ ++ + + Sbjct: 121 GAGWSTATVQAWTEADQALWAGVLNFWFLGRVFDRVR 157 >gi|300689969|ref|YP_003750964.1| hypothetical protein RPSI07_0266 [Ralstonia solanacearum PSI07] gi|299077029|emb|CBJ49644.1| conserved protein of unknown function [Ralstonia solanacearum PSI07] Length = 158 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 64/157 (40%), Gaps = 20/157 (12%) Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65 LA L ++L R G E + +++E++KL+ + D A Sbjct: 16 LAPELLKWLDRKGERGHELA--------MQDKALEFEKLRGAQRMAEIGASADAAWNTGA 67 Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVY----PLLVWWSVKE 121 IE L+ I Q SGV WVD + +RP+ T++++ +Y + Sbjct: 68 IEALRDS-------ISVQGQTSGVPWVDALSISVRPVITYWFMGLYCAAKTAAFAGVLTA 120 Query: 122 GM-FNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 G + + + + Q + A +L FW+ ++ + + Sbjct: 121 GAGWGAATVQAWTEADQALWAGVLNFWFLGRVFDRVR 157 >gi|161525480|ref|YP_001580492.1| hypothetical protein Bmul_2310 [Burkholderia multivorans ATCC 17616] gi|189349791|ref|YP_001945419.1| hypothetical membrane protein [Burkholderia multivorans ATCC 17616] gi|160342909|gb|ABX15995.1| conserved hypothetical protein [Burkholderia multivorans ATCC 17616] gi|189333813|dbj|BAG42883.1| hypothetical membrane protein [Burkholderia multivorans ATCC 17616] Length = 158 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 65/157 (41%), Gaps = 20/157 (12%) Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65 LA + ++L R E + +++E++KL+ + D A Sbjct: 16 LAPEILKWLDRKGERSHELA--------MQDKALEFEKLRGASRMAEIGASADSAWNTGA 67 Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVY----PLLVWWSVKE 121 IE L+ + AQ +S V+W D + +RP+ T++++ +Y ++ Sbjct: 68 IEALRES-------VAAQGQRSRVRWADALSVSVRPVITYWFMALYCAAKTAAFVGAING 120 Query: 122 GM-FNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 G + + L + Q + A +L FW+ ++ + + Sbjct: 121 GSDWGAAILHAWTDADQALWAGVLNFWFLGRVFDRVR 157 >gi|152982387|ref|YP_001354417.1| hypothetical protein mma_2727 [Janthinobacterium sp. Marseille] gi|151282464|gb|ABR90874.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 158 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 65/157 (41%), Gaps = 20/157 (12%) Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65 LA ++L R G E + +++E++K++ ++ D A Sbjct: 16 LAPEFLKWLDRKGERGHELA--------MQDKALEFEKIRGAQRMDEIGAGADAAWNVGA 67 Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVKEGM-- 123 IE L+ + Q K+GV+W D ++ +RP+ T++++ +Y + + Sbjct: 68 IETLRDA-------VRTQGEKTGVRWADALSSSVRPVITYWFMALYCAAKTAAFVAAVTA 120 Query: 124 ---FNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 + L + Q + A +L FW+ ++ + + Sbjct: 121 GAGYGVAILHAWTEADQALWAGVLNFWFLGRVFDRVR 157 >gi|222112355|ref|YP_002554619.1| hypothetical protein Dtpsy_3188 [Acidovorax ebreus TPSY] gi|221731799|gb|ACM34619.1| conserved hypothetical protein [Acidovorax ebreus TPSY] Length = 158 Score = 99.0 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 63/157 (40%), Gaps = 20/157 (12%) Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65 LA + ++L R G E + +++E++KL+ + + A Sbjct: 16 LAPEILKWLDRKGERGHELA--------MQDKALEFEKLRGAQRMAEIGASAEAAWNVGA 67 Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVY-----PLLVWWSVK 120 ++ L+ I Q K+GV+W D + +RP+ T++++ +Y Sbjct: 68 VDALREA-------IRTQGEKTGVRWADALSISVRPVITYWFMALYCAAKTAAFAAAVTA 120 Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 + + L + Q + A +L FW+ ++ + + Sbjct: 121 GAGWGTAILHAWTEADQALWAGVLNFWFLGRVFDRVR 157 >gi|152980935|ref|YP_001354477.1| hypothetical protein mma_2787 [Janthinobacterium sp. Marseille] gi|151281012|gb|ABR89422.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 158 Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 64/157 (40%), Gaps = 20/157 (12%) Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65 LA + ++L R G E + +++E++KL+ ++ D A Sbjct: 16 LAPEILKWLDRKGERGHELA--------MQDKALEFEKLRGAQRLSEIGAGADAAWNVGA 67 Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVY-----PLLVWWSVK 120 IE L+ + Q K+GV+W D + +RP+ T++++ +Y Sbjct: 68 IETLREA-------VRTQGEKTGVRWADALSISVRPVITYWFMALYCAAKTAAFAAAVTA 120 Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 + + L + Q + A +L FW+ ++ + + Sbjct: 121 GASWGTAILHAWTEADQALWAGVLNFWFLGRVFDRVR 157 >gi|255020358|ref|ZP_05292426.1| hypothetical protein ACA_2176 [Acidithiobacillus caldus ATCC 51756] gi|254970278|gb|EET27772.1| hypothetical protein ACA_2176 [Acidithiobacillus caldus ATCC 51756] Length = 158 Score = 96.3 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 64/155 (41%), Gaps = 20/155 (12%) Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65 LA + ++L R E + +++E++KL+ + D A Sbjct: 16 LAPEILKWLDRKGERSHELA--------MQDKALEFEKLRGAQRMAEIGAGADAAWNVGA 67 Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVY-----PLLVWWSVK 120 IE L+ + AQ +SGV+W D +A +RP+ T++++ +Y Sbjct: 68 IETLREA-------VAAQGQRSGVRWADALSASVRPVITYWFMALYCSAKTAAFAAAVTA 120 Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQK 155 + + L + Q + A +L FW+ ++ ++ Sbjct: 121 GAGWGAAILHAWTDADQALWAGVLNFWFLGRVFER 155 >gi|300697168|ref|YP_003747829.1| hypothetical protein RCFBP_mp10636 [Ralstonia solanacearum CFBP2957] gi|299073892|emb|CBJ53423.1| conserved protein of unknown function (fragment) [Ralstonia solanacearum CFBP2957] Length = 123 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 54/129 (41%), Gaps = 12/129 (9%) Query: 34 TKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVD 93 + +++E +K++ + D A IE L+ I AQ SGV W D Sbjct: 1 MQDKALELEKVRGAQRMAEIGASADAAWNTGAIEALRDS-------ITAQGQTSGVPWAD 53 Query: 94 GFTALIRPLTTFFWIIVYPLLVWWSVKEGM-----FNSDPLTLLSPFTQEIIACILGFWY 148 + +RP+ T++++ +Y + + + + L + Q + A +L FW+ Sbjct: 54 ALSITVRPVITYWFMALYCAAKTAAFAGAITAGAGWGAATLQAWTEADQALWAGVLNFWF 113 Query: 149 TDKIVQKKK 157 ++ + + Sbjct: 114 LGRVFDRAR 122 >gi|315122322|ref|YP_004062811.1| hypothetical protein CKC_02870 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495724|gb|ADR52323.1| hypothetical protein CKC_02870 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 55 Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 43/54 (79%), Positives = 49/54 (90%), Gaps = 3/54 (5%) Query: 65 GIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWS 118 GIEELK+D+PIRLARI+AQKVKSGVKW+DGF ALIRPLTTFFWIIV+ +WS Sbjct: 2 GIEELKVDQPIRLARIKAQKVKSGVKWIDGFNALIRPLTTFFWIIVFR---YWS 52 >gi|315122323|ref|YP_004062812.1| hypothetical protein CKC_02875 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495725|gb|ADR52324.1| hypothetical protein CKC_02875 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 40 Score = 71.3 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 27/39 (69%), Positives = 34/39 (87%) Query: 119 VKEGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157 +K G+F+ PL++LSPF Q+IIACILGFW TDKIVQKK+ Sbjct: 1 MKGGIFDRSPLSILSPFEQDIIACILGFWCTDKIVQKKR 39 >gi|53802898|ref|YP_115401.1| hypothetical protein MCA3014 [Methylococcus capsulatus str. Bath] gi|53756659|gb|AAU90950.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath] Length = 98 Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 7/78 (8%) Query: 34 TKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVD 93 + +++E++K + + D A IE L+ + AQ +S V+W D Sbjct: 11 MRDKALEFEKRRGAQRMAEIGAGGDAAWNTGAIETLREA-------VAAQGQRSDVRWAD 63 Query: 94 GFTALIRPLTTFFWIIVY 111 + +RP+ T ++ +Y Sbjct: 64 ALSVSVRPMITCWFRALY 81 >gi|315122321|ref|YP_004062810.1| hypothetical protein CKC_02865 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495723|gb|ADR52322.1| hypothetical protein CKC_02865 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 45 Score = 53.2 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 5/50 (10%) Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSST 55 + GGLF LRF PS F D V EYL +KQSIEYDK+K E + S+T Sbjct: 1 MQGGLFS-ALRFFPSVF----DGVLEYLMQKQSIEYDKMKPEQTRIQSAT 45 >gi|91205650|ref|YP_538005.1| hypothetical protein RBE_0835 [Rickettsia bellii RML369-C] gi|157826893|ref|YP_001495957.1| hypothetical protein A1I_02745 [Rickettsia bellii OSU 85-389] gi|91069194|gb|ABE04916.1| unknown [Rickettsia bellii RML369-C] gi|157802197|gb|ABV78920.1| hypothetical protein A1I_02745 [Rickettsia bellii OSU 85-389] Length = 152 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 6/93 (6%) Query: 68 ELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVKEGMFNSD 127 EL I + + KSGV WVD +RP+ + + +Y +V + + + +S Sbjct: 53 ELTISQEMAEQHALYSTYKSGVSWVDALNGSVRPVLAYSFFAMY-GIVKYVQYKSLKSSA 111 Query: 128 PLT-----LLSPFTQEIIACILGFWYTDKIVQK 155 L L + Q I A I+ F++ + +K Sbjct: 112 LLVQYLDILWTIDDQTIFAGIISFYFGQRTFKK 144 >gi|67459398|ref|YP_247022.1| hypothetical protein RF_1006 [Rickettsia felis URRWXCal2] gi|67004931|gb|AAY61857.1| unknown [Rickettsia felis URRWXCal2] Length = 150 Score = 42.4 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 54/150 (36%), Gaps = 13/150 (8%) Query: 10 LFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEEL 69 LF + FI S I+ + + KK I ++ K + S EL Sbjct: 4 LFAAITGFISSIIPEILKIYKDINDKKHEINILDRQIANNKLNQSKT---------FTEL 54 Query: 70 KIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK----EGMFN 125 I + + KSGV WVD +RP+ + + +Y + + K + Sbjct: 55 TISQEMAEQYSLYSTYKSGVSWVDALNGSVRPVLAYSFFAMYGGVKYVQYKSLKSSALLV 114 Query: 126 SDPLTLLSPFTQEIIACILGFWYTDKIVQK 155 L S Q I A I+ F++ + K Sbjct: 115 EYLDILWSIEDQTIFAGIISFYFGQRTFSK 144 >gi|148284521|ref|YP_001248611.1| hypothetical protein OTBS_0926 [Orientia tsutsugamushi str. Boryong] gi|146739960|emb|CAM79992.1| hypothetical protein OTBS_0926 [Orientia tsutsugamushi str. Boryong] Length = 174 Score = 42.0 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 38/79 (48%), Gaps = 6/79 (7%) Query: 85 VKSGVKWVDGFTALIRPLTTFFWIIVYPLL-----VWWSVKEGMFNSDPLTL-LSPFTQE 138 K+G+ W+D +RP+ + + +Y ++ +++ ++ ++ + + + Q Sbjct: 71 YKTGIAWIDAINGTVRPILAYSFFFMYAIIKIVQYKSLTIQSTIYITEFINILWTSDDQA 130 Query: 139 IIACILGFWYTDKIVQKKK 157 I A I+ F++ + K + Sbjct: 131 IFAGIISFYFGQRTFSKLR 149 >gi|189183175|ref|YP_001936960.1| hypothetical protein OTT_0268 [Orientia tsutsugamushi str. Ikeda] gi|189179946|dbj|BAG39726.1| hypothetical protein OTT_0268 [Orientia tsutsugamushi str. Ikeda] Length = 174 Score = 40.9 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 38/79 (48%), Gaps = 6/79 (7%) Query: 85 VKSGVKWVDGFTALIRPLTTFFWIIVYPLL-----VWWSVKEGMFNSDPLTL-LSPFTQE 138 K+G+ W+D +RP+ + + +Y ++ +++ ++ ++ + + + Q Sbjct: 71 YKTGIVWIDAINGTVRPILAYSFFFMYAIIKIIQYKSLTIQSKIYITEFINILWTSDDQA 130 Query: 139 IIACILGFWYTDKIVQKKK 157 I A I+ F++ + K + Sbjct: 131 IFAGIISFYFGQRTFSKLR 149 >gi|48843800|gb|AAT47059.1| putative mutator-like transposase [Oryza sativa Japonica Group] Length = 1403 Score = 37.0 bits (84), Expect = 0.99, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 56/153 (36%), Gaps = 9/153 (5%) Query: 3 QSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDK--LKLEMAK-----NDSST 55 Q F + ++ RI + + E +++ K L+ K + + Sbjct: 662 QVFYVPDPSKLRVKKGRRQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKKCPKNAEVPS 721 Query: 56 QLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFT-ALIRPLTTFFWIIVYPLL 114 D + + + D P L R + +S + V+G RP T+ W+ V P Sbjct: 722 GADASPSGHSSDGMAYDTPALLNREIDRNHRSFLSAVEGAQLGTFRPRTSREWLRVDPRH 781 Query: 115 VWWSVKEGMFNSDPLTLLSPFTQEIIACILGFW 147 V W V+ + DP + ++A ++ W Sbjct: 782 VPWLVEAAADDRDPAKRW-DADRSLLAALVDRW 813 >gi|42491376|gb|AAS16882.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1433 Score = 37.0 bits (84), Expect = 0.99, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 56/153 (36%), Gaps = 9/153 (5%) Query: 3 QSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDK--LKLEMAK-----NDSST 55 Q F + ++ RI + + E +++ K L+ K + + Sbjct: 662 QVFYVPDPSKLRVKKGRRQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKKCPKNAEVPS 721 Query: 56 QLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFT-ALIRPLTTFFWIIVYPLL 114 D + + + D P L R + +S + V+G RP T+ W+ V P Sbjct: 722 GADASPSGHSSDGMAYDTPALLNREIDRNHRSFLSAVEGAQLGTFRPRTSREWLRVDPRH 781 Query: 115 VWWSVKEGMFNSDPLTLLSPFTQEIIACILGFW 147 V W V+ + DP + ++A ++ W Sbjct: 782 VPWLVEAAADDRDPAKRW-DADRSLLAALVDRW 813 >gi|46127679|ref|XP_388393.1| hypothetical protein FG08217.1 [Gibberella zeae PH-1] Length = 447 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 37/64 (57%) Query: 34 TKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVD 93 ++++ E+++++LE +++ S Q AE + +E LK + ++E QK+++ +K + Sbjct: 309 LQEKAAEFERVRLEQLEDEESFQEAKAEFASEVESLKQKIKDQENKMEQQKLEAELKAAE 368 Query: 94 GFTA 97 A Sbjct: 369 DLKA 372 >gi|315122366|ref|YP_004062855.1| hypothetical protein CKC_03090 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495768|gb|ADR52367.1| hypothetical protein CKC_03090 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 52 Score = 35.1 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 4/47 (8%) Query: 114 LVWWSVKEGMFNS----DPLTLLSPFTQEIIACILGFWYTDKIVQKK 156 +W ++ +F+ L + + Q+II+ +LGFW++D +V+K+ Sbjct: 5 FIWQGIESELFDQKTIATLLVTILEYGQDIISSVLGFWFSDGVVKKE 51 >gi|308494977|ref|XP_003109677.1| CRE-PGP-3 protein [Caenorhabditis remanei] gi|308245867|gb|EFO89819.1| CRE-PGP-3 protein [Caenorhabditis remanei] Length = 1317 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 5/100 (5%) Query: 20 SGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLAR 79 F R E ++QS+ D +L + ++TQ+ EI++ EE+ + + + Sbjct: 665 RLFHRDSVTSDEEREQQQSLARDSTRLRQSMISTTTQVPEWEIESAREEMIEEGAMEASL 724 Query: 80 IE----AQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLV 115 ++ A V F IR LT + IVY L Sbjct: 725 VDIFKYASPEMRNVAIALVF-TFIRGLTWPAFSIVYGQLF 763 >gi|312385491|gb|EFR29977.1| hypothetical protein AND_00724 [Anopheles darlingi] Length = 539 Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Query: 4 SFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIK 63 SF+ G LL+ PS + + L +K S E+ +LK + + + + + + A Sbjct: 146 SFVLGETRSLLLQQFPSLAQASMSAEEMRLLQKLSSEHGQLKESLQRANVAMRKNFA--- 202 Query: 64 AGIEELKIDKPIRLARIEAQ 83 I++L+ + R ++E++ Sbjct: 203 -SIQQLQDETKTRRCQLESR 221 >gi|122070617|sp|Q5P7I9|SURA_AZOSE RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl cis-trans isomerase surA; Short=PPIase surA; AltName: Full=Rotamase surA; Flags: Precursor Length = 439 Score = 34.7 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 3/66 (4%) Query: 26 VDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKV 85 DV+ L ++ +E + +L++A+ ++S Q+D A ++ I + + +A+++A Sbjct: 73 ADVLERQLLERLVLE--RAQLQLAR-ETSLQVDEATLERAIARIAESNRLTIAQLQAALE 129 Query: 86 KSGVKW 91 K GV W Sbjct: 130 KDGVSW 135 >gi|331251185|ref|XP_003338193.1| hypothetical protein PGTG_19801 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309317183|gb|EFP93774.1| hypothetical protein PGTG_19801 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 491 Score = 34.7 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 9/57 (15%) Query: 94 GFTALIRPLTTFFWIIVYPLLVWWSVKEGMFNSDPLTLLSPFTQEIIACILGFWYTD 150 GF L + +FF ++ + WW+ G+ +TLLS I ++GFW+ D Sbjct: 351 GFNTLASKIASFFLMMSLIVAFWWAT--GLVTR-LMTLLS------IGLLIGFWFID 398 >gi|56476034|ref|YP_157623.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aromatoleum aromaticum EbN1] gi|56312077|emb|CAI06722.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aromatoleum aromaticum EbN1] Length = 454 Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 3/66 (4%) Query: 26 VDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKV 85 DV+ L ++ +E + +L++A+ ++S Q+D A ++ I + + +A+++A Sbjct: 88 ADVLERQLLERLVLE--RAQLQLAR-ETSLQVDEATLERAIARIAESNRLTIAQLQAALE 144 Query: 86 KSGVKW 91 K GV W Sbjct: 145 KDGVSW 150 >gi|194332967|ref|YP_002014827.1| membrane-associated zinc metalloprotease [Prosthecochloris aestuarii DSM 271] gi|194310785|gb|ACF45180.1| membrane-associated zinc metalloprotease [Prosthecochloris aestuarii DSM 271] Length = 453 Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 16/128 (12%) Query: 33 LTKKQSIEYDKLK--------LEMA-KNDSSTQLDLAEIKAGIEELKIDK--PIRLARIE 81 L + SI++ KL +E K S+T + +I G E+ + PI++ARI Sbjct: 312 LKQTLSIDHRKLNPVEATFYGIEQTWKMTSTTVMGFGKILTGKEDFRKSMGGPIKIARIA 371 Query: 82 AQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWW----SVKEGMFNSD-PLTLLSPFT 136 Q + G+ F AL+ F I+ P L + EG+ + P+T+ Sbjct: 372 NQSAEQGISSFLYFVALLSISLAFINILPIPALDGGQFVMNAVEGVMGREIPITIKMRIQ 431 Query: 137 QEIIACIL 144 Q +A +L Sbjct: 432 QVGMALLL 439 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.313 0.130 0.361 Lambda K H 0.267 0.0402 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,611,814,892 Number of Sequences: 14124377 Number of extensions: 91473367 Number of successful extensions: 389861 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 69 Number of HSP's that attempted gapping in prelim test: 389725 Number of HSP's gapped (non-prelim): 138 length of query: 157 length of database: 4,842,793,630 effective HSP length: 119 effective length of query: 38 effective length of database: 3,161,992,767 effective search space: 120155725146 effective search space used: 120155725146 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.0 bits) S2: 75 (33.5 bits)