BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781199|ref|YP_003065612.1| hypothetical protein
CLIBASIA_05530 [Candidatus Liberibacter asiaticus str. psy62]
(157 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254781199|ref|YP_003065612.1| hypothetical protein CLIBASIA_05530 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040876|gb|ACT57672.1| hypothetical protein CLIBASIA_05530 [Candidatus Liberibacter
asiaticus str. psy62]
gi|317120664|gb|ADV02487.1| hypothetical protein SC1_gp005 [Liberibacter phage SC1]
gi|317120808|gb|ADV02629.1| hypothetical protein SC1_gp005 [Candidatus Liberibacter asiaticus]
Length = 157
Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats.
Identities = 157/157 (100%), Positives = 157/157 (100%)
Query: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60
MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA
Sbjct: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60
Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120
EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK
Sbjct: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120
Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK
Sbjct: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
>gi|315122886|ref|YP_004063375.1| hypothetical protein CKC_05710 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496288|gb|ADR52887.1| hypothetical protein CKC_05710 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 158
Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats.
Identities = 123/157 (78%), Positives = 139/157 (88%)
Query: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60
MIQSFLAGGLFRF LRF+PS FE+I D V EYL +KQSIEYDK+KLE + +SSTQLDLA
Sbjct: 1 MIQSFLAGGLFRFALRFVPSVFEKIADGVLEYLMQKQSIEYDKMKLEQTRINSSTQLDLA 60
Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120
+IK IEELK+D+PIRLARI+AQKVKSGVKW+DG LIRPLTT FWIIVYPLLVWWSVK
Sbjct: 61 DIKYAIEELKVDQPIRLARIKAQKVKSGVKWIDGLNTLIRPLTTLFWIIVYPLLVWWSVK 120
Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
EG+F+ PL++LSPF QEIIACILGFWYTDKIVQKK+
Sbjct: 121 EGIFDRSPLSILSPFEQEIIACILGFWYTDKIVQKKR 157
>gi|317120748|gb|ADV02570.1| hypothetical protein SC2_gp250 [Liberibacter phage SC2]
gi|317120762|gb|ADV02583.1| hypothetical protein SC2_gp250 [Candidatus Liberibacter asiaticus]
Length = 157
Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats.
Identities = 127/157 (80%), Positives = 142/157 (90%)
Query: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60
MIQSFLAGGLFRFLLRFIPS FERIVDVVSEYLTKKQSIEYDK KLE AK DSS QLDLA
Sbjct: 1 MIQSFLAGGLFRFLLRFIPSSFERIVDVVSEYLTKKQSIEYDKWKLETAKIDSSLQLDLA 60
Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120
+IK GIEELK DKPI+LARI+AQ +KSGVKW+D F L+RPLTT FWIIVYP++VWWSVK
Sbjct: 61 DIKYGIEELKADKPIKLARIKAQNIKSGVKWIDSFNTLVRPLTTLFWIIVYPMMVWWSVK 120
Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
EG+F+ PL++LSPF QEIIACILGFW+TDKIVQK++
Sbjct: 121 EGIFDKSPLSILSPFEQEIIACILGFWFTDKIVQKRR 157
>gi|317120705|gb|ADV02527.1| hypothetical protein SC2_gp005 [Liberibacter phage SC2]
gi|317120766|gb|ADV02587.1| hypothetical protein SC2_gp005 [Candidatus Liberibacter asiaticus]
Length = 158
Score = 137 bits (346), Expect = 3e-31, Method: Composition-based stats.
Identities = 125/156 (80%), Positives = 144/156 (92%)
Query: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60
MIQSFLAGGLFRFLLRFIPS FERIVDVVSEYLTKKQS+EY+K+++E+AK ++STQ++L
Sbjct: 1 MIQSFLAGGLFRFLLRFIPSSFERIVDVVSEYLTKKQSLEYNKMQIELAKINTSTQVNLE 60
Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120
EIK GIEELK DKPIRLAR+++Q VK +KW++GF ALIRPLTT FWI+VYPLLVWWSVK
Sbjct: 61 EIKYGIEELKADKPIRLARVKSQNVKIDIKWINGFNALIRPLTTLFWIVVYPLLVWWSVK 120
Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKK 156
E MF+ DPLTLLSPFTQEIIACILGFWYTDKIVQK+
Sbjct: 121 ERMFSIDPLTLLSPFTQEIIACILGFWYTDKIVQKR 156
>gi|315121924|ref|YP_004062413.1| hypothetical protein CKC_00870 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495326|gb|ADR51925.1| hypothetical protein CKC_00870 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 158
Score = 136 bits (343), Expect = 8e-31, Method: Composition-based stats.
Identities = 123/157 (78%), Positives = 138/157 (87%)
Query: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60
MIQSFLAGG+FRF LRF+PS FE+I D V EYL +KQSIEYDK+KLE K +SSTQLDLA
Sbjct: 1 MIQSFLAGGIFRFALRFVPSVFEKIADGVLEYLMQKQSIEYDKMKLEQTKINSSTQLDLA 60
Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120
EIK GIEELK+DKPIRLARI+AQKVKSG+KW+DG ALIRPLTT FWIIVYPLLVWWSVK
Sbjct: 61 EIKYGIEELKVDKPIRLARIKAQKVKSGIKWIDGVNALIRPLTTLFWIIVYPLLVWWSVK 120
Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
EG F+ PL +L+ F QEIIACILGFWYTDKIVQK++
Sbjct: 121 EGYFDKSPLAVLTLFEQEIIACILGFWYTDKIVQKRR 157
>gi|148284521|ref|YP_001248611.1| hypothetical protein OTBS_0926 [Orientia tsutsugamushi str.
Boryong]
gi|146739960|emb|CAM79992.1| hypothetical protein OTBS_0926 [Orientia tsutsugamushi str.
Boryong]
Length = 174
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 54/154 (35%), Gaps = 14/154 (9%)
Query: 10 LFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEEL 69
L ++ FI S I+ ++ + ++ +++ K +A L E + E
Sbjct: 4 LLASIVGFISSVVPEILKLIKDKNERQHTMDMLDKKAYLAYCLQEHSLKKMEFAKDLAEH 63
Query: 70 KIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVKEG------M 123
K+G+ W+D +RP+ + + +Y ++ K
Sbjct: 64 TAII--------YTTYKTGIAWIDAINGTVRPILAYSFFFMYAIIKIVQYKSLTIQSTIY 115
Query: 124 FNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
L + Q I A I+ F++ + K +
Sbjct: 116 ITEFINILWTSDDQAIFAGIISFYFGQRTFSKLR 149
>gi|300689969|ref|YP_003750964.1| hypothetical protein RPSI07_0266 [Ralstonia solanacearum PSI07]
gi|299077029|emb|CBJ49644.1| conserved protein of unknown function [Ralstonia solanacearum
PSI07]
Length = 158
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65
LA L ++L R G E + + +++E++KL+ + D A
Sbjct: 16 LAPELLKWLDRKGERGHELAM--------QDKALEFEKLRGAQRMAEIGASADAAWNTGA 67
Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSV-----K 120
IE L+ + Q SGV WVD + +RP+ T++++ +Y +
Sbjct: 68 IEALRDSISV-------QGQTSGVPWVDALSISVRPVITYWFMGLYCAAKTAAFAGVLTA 120
Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
+ + + + Q + A +L FW+ ++ + +
Sbjct: 121 GAGWGAATVQAWTEADQALWAGVLNFWFLGRVFDRVR 157
>gi|17545601|ref|NP_519003.1| transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17427894|emb|CAD14584.1| putative transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 158
Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 66/157 (42%), Gaps = 20/157 (12%)
Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65
LA + +++ R G E + + +++E++KL+ + D A
Sbjct: 16 LAPEILKWIDRKGERGHELAM--------QDKALEFEKLRGAQRMAEIGASADAAWNTGA 67
Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSV-----K 120
IE L+ I AQ SGV WVD + +RP+ T++++ +Y +
Sbjct: 68 IEALRDS-------ITAQGQTSGVPWVDALSISVRPVITYWFMGLYCAAKTAAFAGVLTA 120
Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
+++ + + Q + A +L FW+ ++ + +
Sbjct: 121 GAGWSTATVQAWTEADQALWAGVLNFWFLGRVFDRVR 157
>gi|161525480|ref|YP_001580492.1| hypothetical protein Bmul_2310 [Burkholderia multivorans ATCC
17616]
gi|189349791|ref|YP_001945419.1| hypothetical membrane protein [Burkholderia multivorans ATCC 17616]
gi|160342909|gb|ABX15995.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
gi|189333813|dbj|BAG42883.1| hypothetical membrane protein [Burkholderia multivorans ATCC 17616]
Length = 158
Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65
LA + ++L R E + + +++E++KL+ + D A
Sbjct: 16 LAPEILKWLDRKGERSHELAM--------QDKALEFEKLRGASRMAEIGASADSAWNTGA 67
Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVKEG--- 122
IE L+ + AQ +S V+W D + +RP+ T++++ +Y +
Sbjct: 68 IEALRES-------VAAQGQRSRVRWADALSVSVRPVITYWFMALYCAAKTAAFVGAING 120
Query: 123 --MFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
+ + L + Q + A +L FW+ ++ + +
Sbjct: 121 GSDWGAAILHAWTDADQALWAGVLNFWFLGRVFDRVR 157
>gi|67459398|ref|YP_247022.1| hypothetical protein RF_1006 [Rickettsia felis URRWXCal2]
gi|67004931|gb|AAY61857.1| unknown [Rickettsia felis URRWXCal2]
Length = 150
Score = 120 bits (300), Expect = 7e-26, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 52/150 (34%), Gaps = 13/150 (8%)
Query: 10 LFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEEL 69
LF + FI S I+ + + KK I + +A N + E+ E
Sbjct: 4 LFAAITGFISSIIPEILKIYKDINDKKHEINILDRQ--IANNKLNQSKTFTELTISQE-- 59
Query: 70 KIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVW----WSVKEGMFN 125
+ KSGV WVD +RP+ + + +Y + + +
Sbjct: 60 -----MAEQYSLYSTYKSGVSWVDALNGSVRPVLAYSFFAMYGGVKYVQYKSLKSSALLV 114
Query: 126 SDPLTLLSPFTQEIIACILGFWYTDKIVQK 155
L S Q I A I+ F++ + K
Sbjct: 115 EYLDILWSIEDQTIFAGIISFYFGQRTFSK 144
>gi|189183175|ref|YP_001936960.1| hypothetical protein OTT_0268 [Orientia tsutsugamushi str. Ikeda]
gi|189179946|dbj|BAG39726.1| hypothetical protein OTT_0268 [Orientia tsutsugamushi str. Ikeda]
Length = 174
Score = 120 bits (300), Expect = 8e-26, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 56/154 (36%), Gaps = 14/154 (9%)
Query: 10 LFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEEL 69
L ++ FI S I+ ++ + ++ +++ K +A + L E + E
Sbjct: 4 LLASIVGFISSVVPEILKLIKDKNERQHTMDMLDKKAYLAHWLQESSLKKMEFAKDLAE- 62
Query: 70 KIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVKEG------M 123
I K+G+ W+D +RP+ + + +Y ++ K
Sbjct: 63 -------HTAIIYTTYKTGIVWIDAINGTVRPILAYSFFFMYAIIKIIQYKSLTIQSKIY 115
Query: 124 FNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
L + Q I A I+ F++ + K +
Sbjct: 116 ITEFINILWTSDDQAIFAGIISFYFGQRTFSKLR 149
>gi|17547913|ref|NP_521315.1| hypothetical protein RSc3194 [Ralstonia solanacearum GMI1000]
gi|17430219|emb|CAD16982.1| hypothetical transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 160
Score = 120 bits (300), Expect = 8e-26, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 20/156 (12%)
Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65
LA GL ++L R G E + + +++E++KL+ + D A
Sbjct: 16 LAPGLLKWLDRKGERGHELAM--------QDKALEFEKLRGAQRMAEIGASADAAWNTGA 67
Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLV-----WWSVK 120
IE L+ I AQ K+GV+W D + +RP+ T+ ++++Y + +
Sbjct: 68 IEALRDS-------ITAQGEKTGVRWADALSTTVRPVVTYLFVLMYTGVKLSTFGGSAQA 120
Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKK 156
F L S Q ++A IL FW+ ++ +++
Sbjct: 121 GVGFGPALLAAWSEADQALLAGILNFWFISRVWERR 156
>gi|91205650|ref|YP_538005.1| hypothetical protein RBE_0835 [Rickettsia bellii RML369-C]
gi|157826893|ref|YP_001495957.1| hypothetical protein A1I_02745 [Rickettsia bellii OSU 85-389]
gi|91069194|gb|ABE04916.1| unknown [Rickettsia bellii RML369-C]
gi|157802197|gb|ABV78920.1| hypothetical protein A1I_02745 [Rickettsia bellii OSU 85-389]
Length = 152
Score = 119 bits (299), Expect = 9e-26, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 53/150 (35%), Gaps = 13/150 (8%)
Query: 10 LFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEEL 69
L + FI S I+ + + K+ I+ ++ + EL
Sbjct: 4 LLAAITGFISSIIPEILKIYKDINDKRHEIDILDRQI---------TNNKLNQSKTFTEL 54
Query: 70 KIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVW----WSVKEGMFN 125
I + + KSGV WVD +RP+ + + +Y ++ + +
Sbjct: 55 TISQEMAEQHALYSTYKSGVSWVDALNGSVRPVLAYSFFAMYGIVKYVQYKSLKSSALLV 114
Query: 126 SDPLTLLSPFTQEIIACILGFWYTDKIVQK 155
L + Q I A I+ F++ + +K
Sbjct: 115 QYLDILWTIDDQTIFAGIISFYFGQRTFKK 144
>gi|53803115|ref|YP_115083.1| hypothetical protein MCA2679 [Methylococcus capsulatus str. Bath]
gi|53756876|gb|AAU91167.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
Length = 158
Score = 119 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSI-------EYDKLKLEMAKNDSSTQLD 58
+ L L I+ + + + E++KL+ + D
Sbjct: 1 MIETLLGGFLGGAFRLAPEILKWLDRKGERGHELAMQDKALEFEKLRGAQRMAEIGASAD 60
Query: 59 LAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYP-----L 113
A IE L+ + Q K+GV+W D ++ +RP+ T++++ +Y
Sbjct: 61 AAWNSGAIEALRDA-------VRTQGEKTGVRWADALSSSVRPVITYWFMALYCAAKTAA 113
Query: 114 LVWWSVKEGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
+ L + Q + A +L FW+ ++ + +
Sbjct: 114 FAAAVTAGAGWGVAILHAWTEADQALWAGVLNFWFLGRVFDRGR 157
>gi|299067556|emb|CBJ38758.1| conserved protein of unknown function [Ralstonia solanacearum
CMR15]
Length = 158
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 65/157 (41%), Gaps = 20/157 (12%)
Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65
LA L ++L R G E + + +++E++KL+ + D A
Sbjct: 16 LAPELLKWLDRKGERGHELAM--------QDKALEFEKLRGAQRMAEIGASADAAWNAGA 67
Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSV-----K 120
++ L+ I AQ SGV WVD + +RP+ T++++ +Y +
Sbjct: 68 LQALRDS-------ISAQGQTSGVPWVDALSISVRPVITYWFMALYCAAKTAAFAGELTA 120
Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
+ + L + Q + A +L FW+ ++ + +
Sbjct: 121 GAGWGAATLQAWTEADQALWAGVLNFWFVGRVFDRVR 157
>gi|207725396|ref|YP_002255792.1| hypothetical protein RSMK00245 [Ralstonia solanacearum MolK2]
gi|206590632|emb|CAQ37594.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 160
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 62/155 (40%), Gaps = 20/155 (12%)
Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65
LA + ++L R G E + + +++E++K++ + D A
Sbjct: 16 LAPEILKWLDRKGERGHELAM--------QDKALEFEKVRGAQRMAEIGASADAAWNTGA 67
Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVKEGM-- 123
IE L+ I AQ SGV W D + +RP+ T+ ++ +Y +
Sbjct: 68 IEALRDS-------ITAQGQTSGVPWADALSITVRPVITYSFMALYCAAKAAVFTGAITA 120
Query: 124 ---FNSDPLTLLSPFTQEIIACILGFWYTDKIVQK 155
+ + + + Q + A +L FW+ + + K
Sbjct: 121 GAGWITATVHAWTEADQALWAGVLNFWFLGRTLDK 155
>gi|300697182|ref|YP_003747843.1| hypothetical protein RCFBP_mp20007 [Ralstonia solanacearum
CFBP2957]
gi|299073906|emb|CBJ53437.1| conserved protein of unknown function [Ralstonia solanacearum
CFBP2957]
Length = 160
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 62/155 (40%), Gaps = 20/155 (12%)
Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65
LA + ++L R G E + + +++E+++++ + D A
Sbjct: 16 LAPEILKWLDRKGERGHELAM--------QDKALEFERVRGAQRMAEIGASADAAWNTGA 67
Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVKEGM-- 123
IE L+ I AQ SGV W D + +RP+ T+ ++ +Y +
Sbjct: 68 IEALRDS-------ITAQGQTSGVPWADALSITVRPVITYSFMALYCAAKAAVFTGAITA 120
Query: 124 ---FNSDPLTLLSPFTQEIIACILGFWYTDKIVQK 155
+ + + S Q + A +L FW+ + + K
Sbjct: 121 GAGWITATVHAWSEADQALWAGVLNFWFLGRTLDK 155
>gi|152980935|ref|YP_001354477.1| hypothetical protein mma_2787 [Janthinobacterium sp. Marseille]
gi|151281012|gb|ABR89422.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 158
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 67/157 (42%), Gaps = 20/157 (12%)
Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65
LA + ++L R G E + + +++E++KL+ ++ D A
Sbjct: 16 LAPEILKWLDRKGERGHELAM--------QDKALEFEKLRGAQRLSEIGAGADAAWNVGA 67
Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVKEGM-- 123
IE L+ + Q K+GV+W D + +RP+ T++++ +Y + +
Sbjct: 68 IETLREA-------VRTQGEKTGVRWADALSISVRPVITYWFMALYCAAKTAAFAAAVTA 120
Query: 124 ---FNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
+ + L + Q + A +L FW+ ++ + +
Sbjct: 121 GASWGTAILHAWTEADQALWAGVLNFWFLGRVFDRVR 157
>gi|152982387|ref|YP_001354417.1| hypothetical protein mma_2727 [Janthinobacterium sp. Marseille]
gi|151282464|gb|ABR90874.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 158
Score = 114 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 66/157 (42%), Gaps = 20/157 (12%)
Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65
LA ++L R G E + + +++E++K++ ++ D A
Sbjct: 16 LAPEFLKWLDRKGERGHELAM--------QDKALEFEKIRGAQRMDEIGAGADAAWNVGA 67
Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVKEGM-- 123
IE L+ + Q K+GV+W D ++ +RP+ T++++ +Y + +
Sbjct: 68 IETLRDA-------VRTQGEKTGVRWADALSSSVRPVITYWFMALYCAAKTAAFVAAVTA 120
Query: 124 ---FNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
+ L + Q + A +L FW+ ++ + +
Sbjct: 121 GAGYGVAILHAWTEADQALWAGVLNFWFLGRVFDRVR 157
>gi|222112355|ref|YP_002554619.1| hypothetical protein Dtpsy_3188 [Acidovorax ebreus TPSY]
gi|221731799|gb|ACM34619.1| conserved hypothetical protein [Acidovorax ebreus TPSY]
Length = 158
Score = 113 bits (283), Expect = 7e-24, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65
LA + ++L R G E + + +++E++KL+ + + A
Sbjct: 16 LAPEILKWLDRKGERGHELAM--------QDKALEFEKLRGAQRMAEIGASAEAAWNVGA 67
Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYP-----LLVWWSVK 120
++ L+ I Q K+GV+W D + +RP+ T++++ +Y
Sbjct: 68 VDALREA-------IRTQGEKTGVRWADALSISVRPVITYWFMALYCAAKTAAFAAAVTA 120
Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
+ + L + Q + A +L FW+ ++ + +
Sbjct: 121 GAGWGTAILHAWTEADQALWAGVLNFWFLGRVFDRVR 157
>gi|157964345|ref|YP_001499169.1| hypothetical protein RMA_0367 [Rickettsia massiliae MTU5]
gi|157844121|gb|ABV84622.1| hypothetical protein RMA_0367 [Rickettsia massiliae MTU5]
Length = 143
Score = 113 bits (282), Expect = 9e-24, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 48/144 (33%), Gaps = 13/144 (9%)
Query: 16 RFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPI 75
FI S I+ + + KK I L ++A N + E+ E +
Sbjct: 3 GFISSIIPEILKIYKDINDKKHEINI--LDCQIANNKLNQSKTCTELTISQE-------M 53
Query: 76 RLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVW----WSVKEGMFNSDPLTL 131
SGV VD +R + ++ + +Y + + + L
Sbjct: 54 AEQYSLYSTYTSGVSRVDALNGSVRSVLSYSFFAMYGGVKYVQYKSLKSSALLVEYLDIL 113
Query: 132 LSPFTQEIIACILGFWYTDKIVQK 155
S Q I A I+ F++ + K
Sbjct: 114 WSIEDQTIFAEIISFYFGQRTFSK 137
>gi|255020358|ref|ZP_05292426.1| hypothetical protein ACA_2176 [Acidithiobacillus caldus ATCC 51756]
gi|254970278|gb|EET27772.1| hypothetical protein ACA_2176 [Acidithiobacillus caldus ATCC 51756]
Length = 158
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 65/155 (41%), Gaps = 20/155 (12%)
Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65
LA + ++L R E + + +++E++KL+ + D A
Sbjct: 16 LAPEILKWLDRKGERSHELAM--------QDKALEFEKLRGAQRMAEIGAGADAAWNVGA 67
Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYP-----LLVWWSVK 120
IE L+ + AQ +SGV+W D +A +RP+ T++++ +Y
Sbjct: 68 IETLREA-------VAAQGQRSGVRWADALSASVRPVITYWFMALYCSAKTAAFAAAVTA 120
Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQK 155
+ + L + Q + A +L FW+ ++ ++
Sbjct: 121 GAGWGAAILHAWTDADQALWAGVLNFWFLGRVFER 155
>gi|254780988|ref|YP_003065401.1| hypothetical protein CLIBASIA_04445 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040665|gb|ACT57461.1| hypothetical protein CLIBASIA_04445 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 151
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 79/158 (50%), Positives = 114/158 (72%), Gaps = 15/158 (9%)
Query: 4 SFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIK 63
SFL G + RF ++F+PS F +++ EY+ K++SIE+D+L+LE+AK S+TQ+D
Sbjct: 3 SFLTGSIARFFIKFVPSLF----NLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVD----- 53
Query: 64 AGIEELKIDKPIRLARIEAQ----KVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSV 119
++ L+ + P+RLAR++ Q + + K + F ALIRP TT FWII+YPLL+WW V
Sbjct: 54 --LKALESETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGV 111
Query: 120 KEGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
++G DPLTLL+PFTQ+IIACILGFW+TD IVQ++K
Sbjct: 112 EKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRK 149
>gi|300697168|ref|YP_003747829.1| hypothetical protein RCFBP_mp10636 [Ralstonia solanacearum
CFBP2957]
gi|299073892|emb|CBJ53423.1| conserved protein of unknown function (fragment) [Ralstonia
solanacearum CFBP2957]
Length = 123
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 53/129 (41%), Gaps = 12/129 (9%)
Query: 34 TKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVD 93
+ +++E +K++ + D A IE L+ I AQ SGV W D
Sbjct: 1 MQDKALELEKVRGAQRMAEIGASADAAWNTGAIEALRDS-------ITAQGQTSGVPWAD 53
Query: 94 GFTALIRPLTTFFWIIVYPLLVWWSVK-----EGMFNSDPLTLLSPFTQEIIACILGFWY 148
+ +RP+ T++++ +Y + + + L + Q + A +L FW+
Sbjct: 54 ALSITVRPVITYWFMALYCAAKTAAFAGAITAGAGWGAATLQAWTEADQALWAGVLNFWF 113
Query: 149 TDKIVQKKK 157
++ + +
Sbjct: 114 LGRVFDRAR 122
>gi|315122770|ref|YP_004063259.1| hypothetical protein CKC_05125 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496172|gb|ADR52771.1| hypothetical protein CKC_05125 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 124
Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats.
Identities = 90/124 (72%), Positives = 105/124 (84%)
Query: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60
MIQSFL G +FRF LRFIPS FE+I D V EYL +KQSIEYDK+KLE+A+ +SSTQLDLA
Sbjct: 1 MIQSFLVGEVFRFALRFIPSVFEKIADGVLEYLMQKQSIEYDKMKLELARINSSTQLDLA 60
Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVK 120
+IK IEELK D+ IRLARI+AQKVKSG++W+DGF A +RPLT+ FWIIVYPLLVWWSVK
Sbjct: 61 DIKLEIEELKADQLIRLARIKAQKVKSGIQWIDGFNAFVRPLTSLFWIIVYPLLVWWSVK 120
Query: 121 EGMF 124
G
Sbjct: 121 GGHL 124
>gi|315122344|ref|YP_004062833.1| hypothetical protein CKC_02980 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495746|gb|ADR52345.1| hypothetical protein CKC_02980 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 125
Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats.
Identities = 94/126 (74%), Positives = 110/126 (87%), Gaps = 4/126 (3%)
Query: 34 TKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVD 93
+KQSIEYDK KLE+A+ STQLDLA+IK IEELK+D+PIRLARI+AQK KSG+KW+D
Sbjct: 1 MQKQSIEYDKTKLELAR--GSTQLDLADIKYAIEELKVDQPIRLARIKAQKFKSGIKWID 58
Query: 94 GFTALIRPLTTFFWIIVYPLLVWWS--VKEGMFNSDPLTLLSPFTQEIIACILGFWYTDK 151
GF ALIRPLTTFFWII+YPLLVW VKEG+F+ PL++LSPF Q+IIACILGFWYTDK
Sbjct: 59 GFNALIRPLTTFFWIIIYPLLVWGIVCVKEGVFDRSPLSILSPFEQDIIACILGFWYTDK 118
Query: 152 IVQKKK 157
IVQKK+
Sbjct: 119 IVQKKR 124
>gi|315122566|ref|YP_004063055.1| hypothetical protein CKC_04090 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495968|gb|ADR52567.1| hypothetical protein CKC_04090 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 130
Score = 95.2 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 90/130 (69%), Positives = 110/130 (84%), Gaps = 7/130 (5%)
Query: 34 TKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVD 93
+K+SIEY+K+KLE + SSTQLDLA+IK GIEELK+D+PIRLARI+AQ+VKSG++W+D
Sbjct: 1 MQKRSIEYEKMKLEQTRIQSSTQLDLADIKLGIEELKVDQPIRLARIKAQQVKSGIQWID 60
Query: 94 GF----TALIRPLTTFFWIIVYPLLVWW--SVKEGMFNSDPLTLLSPFTQEIIACILGFW 147
F ALIRPLTT FWII +PLLVWW VKEG+F+ PL++LSPF Q+IIACILGFW
Sbjct: 61 AFNALINALIRPLTTLFWII-FPLLVWWSMGVKEGIFDRSPLSILSPFEQDIIACILGFW 119
Query: 148 YTDKIVQKKK 157
YTDKIVQKK+
Sbjct: 120 YTDKIVQKKR 129
>gi|315122303|ref|YP_004062792.1| hypothetical protein CKC_02775 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495705|gb|ADR52304.1| hypothetical protein CKC_02775 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 115
Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 69/103 (66%), Positives = 82/103 (79%), Gaps = 2/103 (1%)
Query: 11 FRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELK 70
L PS FE+I D V EYL +KQSIEYDK+ LE+ + +SSTQLDLA+IK IEELK
Sbjct: 6 LDLLFGLSPSVFEKIADGVLEYLMQKQSIEYDKMNLELPRINSSTQLDLADIKYAIEELK 65
Query: 71 IDKPIRLARIEAQKVK--SGVKWVDGFTALIRPLTTFFWIIVY 111
+D+ IRLARI+AQKVK SGVKW+DGF ALIRPLTTFFWII++
Sbjct: 66 VDQSIRLARIKAQKVKNGSGVKWIDGFNALIRPLTTFFWIIIF 108
>gi|315121790|ref|YP_004062279.1| hypothetical protein CKC_00200 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495192|gb|ADR51791.1| hypothetical protein CKC_00200 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 121
Score = 69.0 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 68/100 (68%), Positives = 81/100 (81%), Gaps = 2/100 (2%)
Query: 1 MIQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLA 60
M++SFLA GLFR LRFIPS FE+I D V EYL +KQSIEYDK KLE+A+ + STQLDLA
Sbjct: 1 MMESFLASGLFRLALRFIPSVFEKIADGVLEYLMQKQSIEYDKTKLELARINGSTQLDLA 60
Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVK--WVDGFTAL 98
+IK IEELK+D+ IRLARI+AQKVKSG W+DGF +L
Sbjct: 61 DIKYAIEELKVDQSIRLARIKAQKVKSGSGVKWIDGFDSL 100
>gi|53802898|ref|YP_115401.1| hypothetical protein MCA3014 [Methylococcus capsulatus str. Bath]
gi|53756659|gb|AAU90950.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
Length = 98
Score = 66.7 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 37/97 (38%), Gaps = 7/97 (7%)
Query: 31 EYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVK 90
+ +++E++K + + D A IE L+ + AQ +S V+
Sbjct: 8 SSAMRDKALEFEKRRGAQRMAEIGAGGDAAWNTGAIETLREA-------VAAQGQRSDVR 60
Query: 91 WVDGFTALIRPLTTFFWIIVYPLLVWWSVKEGMFNSD 127
W D + +RP+ T ++ +Y + +
Sbjct: 61 WADALSVSVRPMITCWFRALYCAAKTATSVGAISGGA 97
>gi|315122634|ref|YP_004063123.1| hypothetical protein CKC_04430 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496036|gb|ADR52635.1| hypothetical protein CKC_04430 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 228
Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/83 (68%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
Query: 27 DVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVK 86
+SE+L +K+ IEYDK KLE + S+TQLDLA+IK GIEELK+D+PIRLARI+AQKVK
Sbjct: 129 KFISEHLMQKRFIEYDKTKLEQTRIQSTTQLDLADIKLGIEELKVDQPIRLARIKAQKVK 188
Query: 87 S--GVKWVDGFTALIRPLTTFFW 107
S GVKW+DGF +LIRPLTTFF
Sbjct: 189 SSSGVKWIDGFNSLIRPLTTFFL 211
>gi|15892285|ref|NP_359999.1| hypothetical protein RC0362 [Rickettsia conorii str. Malish 7]
gi|15619426|gb|AAL02900.1| unknown [Rickettsia conorii str. Malish 7]
Length = 64
Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 20/58 (34%), Gaps = 4/58 (6%)
Query: 102 LTTFFWIIVYPLLVW----WSVKEGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQK 155
+ + + +Y + + + L S Q I A I+ F++ + K
Sbjct: 1 MLAYSFFAMYGGVKYVQYKSLKSSALLVEYLDILWSIEDQTIFAEIISFYFGQRTFSK 58
>gi|315122322|ref|YP_004062811.1| hypothetical protein CKC_02870 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495724|gb|ADR52323.1| hypothetical protein CKC_02870 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 55
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/46 (86%), Positives = 45/46 (97%)
Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVY 111
IEELK+D+PIRLARI+AQKVKSGVKW+DGF ALIRPLTTFFWIIV+
Sbjct: 3 IEELKVDQPIRLARIKAQKVKSGVKWIDGFNALIRPLTTFFWIIVF 48
>gi|315122323|ref|YP_004062812.1| hypothetical protein CKC_02875 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495725|gb|ADR52324.1| hypothetical protein CKC_02875 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 40
Score = 43.2 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 27/39 (69%), Positives = 34/39 (87%)
Query: 119 VKEGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
+K G+F+ PL++LSPF Q+IIACILGFW TDKIVQKK+
Sbjct: 1 MKGGIFDRSPLSILSPFEQDIIACILGFWCTDKIVQKKR 39
>gi|157825491|ref|YP_001493211.1| hypothetical protein A1C_01960 [Rickettsia akari str. Hartford]
gi|157799449|gb|ABV74703.1| hypothetical protein A1C_01960 [Rickettsia akari str. Hartford]
Length = 57
Score = 43.2 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 8/37 (21%), Positives = 14/37 (37%)
Query: 10 LFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKL 46
L + FI S I+ + + KK I ++
Sbjct: 4 LLAVITGFISSIIPEILKMYKDINDKKHEINILDRQI 40
>gi|78358461|ref|YP_389910.1| hypothetical protein Dde_3422 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220866|gb|ABB40215.1| hypothetical protein Dde_3422 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 89
Score = 42.8 bits (99), Expect = 0.014, Method: Composition-based stats.
Identities = 5/24 (20%), Positives = 12/24 (50%)
Query: 134 PFTQEIIACILGFWYTDKIVQKKK 157
Q + A +L FW+ ++ + +
Sbjct: 65 EADQALWAGVLNFWFLGRVFDRVR 88
>gi|30250454|ref|NP_842524.1| hypothetical protein NE2535 [Nitrosomonas europaea ATCC 19718]
gi|30139295|emb|CAD86447.1| hypothetical protein NE2535 [Nitrosomonas europaea ATCC 19718]
Length = 392
Score = 41.6 bits (96), Expect = 0.032, Method: Composition-based stats.
Identities = 5/24 (20%), Positives = 12/24 (50%)
Query: 134 PFTQEIIACILGFWYTDKIVQKKK 157
Q + A +L FW+ ++ + +
Sbjct: 368 EKDQALWAGVLNFWFIGRVFDRVR 391
>gi|292491119|ref|YP_003526558.1| hypothetical protein Nhal_0998 [Nitrosococcus halophilus Nc4]
gi|291579714|gb|ADE14171.1| hypothetical protein Nhal_0998 [Nitrosococcus halophilus Nc4]
Length = 137
Score = 41.6 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 32/100 (32%), Gaps = 7/100 (7%)
Query: 56 QLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLV 115
+ L R + W + IRPL + +I + +
Sbjct: 33 KARLERDLTQALAAHQLTQERERTQRHGADMASDSW---LSKNIRPLVLVYLMIAWTVFS 89
Query: 116 WWSVKEGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQK 155
S+ GM ++ + +L GF++ + V+K
Sbjct: 90 VLSISGGMVDAVYVGMLKEMLMAAF----GFYFAGRSVEK 125
>gi|83648292|ref|YP_436727.1| hypothetical protein HCH_05644 [Hahella chejuensis KCTC 2396]
gi|83636335|gb|ABC32302.1| hypothetical protein HCH_05644 [Hahella chejuensis KCTC 2396]
Length = 179
Score = 41.3 bits (95), Expect = 0.045, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 57/167 (34%), Gaps = 23/167 (13%)
Query: 4 SFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIK 63
+ + L+ S + E ++ + Y+ + K ++ Q D
Sbjct: 7 ALFSSSGLGALVGMFGSW----LTKREERKDQQFRLTYELKMATLRKQEAELQYDHELAL 62
Query: 64 AGIEELKIDKPIRLAR-----------IEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYP 112
A + L+ D R+ R ++ Q G+ +VD L+RPL T + +I+
Sbjct: 63 ADKQILRADTEGRINRDIAETAAFKDGLKEQSQTYGMWFVDAIRGLMRPLITVYLLILAT 122
Query: 113 LLVW-----WSVKEGMFNSDPLTLLSPFTQEII---ACILGFWYTDK 151
+ + + + L +++ + +W+ +
Sbjct: 123 FVTLNISRHLGGAGALSPVELMVLYKEAIAQLLFLTTTAVTWWFGSR 169
>gi|157828240|ref|YP_001494482.1| hypothetical protein A1G_02065 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|157800721|gb|ABV75974.1| hypothetical protein A1G_02065 [Rickettsia rickettsii str. 'Sheila
Smith']
Length = 56
Score = 40.9 bits (94), Expect = 0.060, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 16/50 (32%), Gaps = 4/50 (8%)
Query: 110 VYPLLVW----WSVKEGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQK 155
+Y + + + LL Q I A I+ F++ K
Sbjct: 1 MYGGVKYVQYKSLKSSALLVEYLDILLGIEDQTIFAEIISFYFGQSTFSK 50
>gi|15892284|ref|NP_359998.1| hypothetical protein RC0361 [Rickettsia conorii str. Malish 7]
gi|15619425|gb|AAL02899.1| unknown [Rickettsia conorii str. Malish 7]
Length = 75
Score = 40.5 bits (93), Expect = 0.084, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 18/45 (40%)
Query: 13 FLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQL 57
+ F+ S I+ + + KK I ++ KN S +L
Sbjct: 2 AITGFMSSIIPEILKIYKDINDKKHEINILDRQIANNKNLISLKL 46
>gi|257095591|ref|YP_003169232.1| hypothetical protein CAP2UW1_4061 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048115|gb|ACV37303.1| protein of unknown function DUF847 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 404
Score = 40.1 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 46/120 (38%), Gaps = 3/120 (2%)
Query: 38 SIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTA 97
+ L+ + A + ++ Q AE+ A + L+ + R ++ K S + W
Sbjct: 64 RLAEIALETQKAMDLAAEQQRQAELAAIQKALENTQGARSTMVDLVKSGSAIAWGAPL-- 121
Query: 98 LIRPLTTFFWIIVYPLLVWWSVKEGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
+ + T + I +L+ +++ ++ + + A ++ FW + K
Sbjct: 122 -VSAIVTAGFFIFLIVLIHTDLRDNPTVANVINITVGALAAAFATVVNFWLGSSQGSRDK 180
>gi|319789035|ref|YP_004150668.1| hypothetical protein Theam_0053 [Thermovibrio ammonificans HB-1]
gi|317113537|gb|ADU96027.1| hypothetical protein Theam_0053 [Thermovibrio ammonificans HB-1]
Length = 146
Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 50/151 (33%), Gaps = 21/151 (13%)
Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEY-LTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKA 64
L G+ L + + V E + IE +KL +L + K
Sbjct: 8 LIPGIVEALKGLLKKKAPDVAQKVEELLSDPQTRIELEKL------AIRKMELQMEPEKW 61
Query: 65 GIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVKEGMF 124
+ + + + + + + +RP+ + +++ + + S K
Sbjct: 62 ELADRASAREMARYDMTSDSF---------LSKNVRPMVLIYLTVMFTIAFFLSAKNEFA 112
Query: 125 NSDPLTLLSPFTQEIIACILGFWYTDKIVQK 155
T Q ++ + GF++ + ++K
Sbjct: 113 AQMVNT-----FQSLLLWVYGFYFGGRSLEK 138
>gi|238026715|ref|YP_002910946.1| Bbp1 [Burkholderia glumae BGR1]
gi|237875909|gb|ACR28242.1| Bbp1 [Burkholderia glumae BGR1]
Length = 199
Score = 38.6 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Query: 43 KLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTAL-IRP 101
+ ++ + + + DLA+I A E+ ++ L EA S K +RP
Sbjct: 62 EAAGKLKQAEMDHERDLAQIAAQREQTELSARTALYSAEAADRDSARKLAAKQPGDWVRP 121
Query: 102 LTTFFWIIVYPLLVWWSVKEGMFNSDPLTLLSPFTQEIIACILGFWY 148
TF +++ + +F+ + L T + ++G+W+
Sbjct: 122 TITFG--LLFGAIAILVF---VFHGNASLLKDATTSLTVGTVIGYWF 163
>gi|118593515|ref|ZP_01550894.1| hypothetical protein SIAM614_21537 [Stappia aggregata IAM 12614]
gi|118433854|gb|EAV40513.1| hypothetical protein SIAM614_21537 [Stappia aggregata IAM 12614]
Length = 440
Score = 37.8 bits (86), Expect = 0.46, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 50/137 (36%), Gaps = 10/137 (7%)
Query: 24 RIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQ 83
+ + E L K+Q E + ++ + D + Q + E KA + +++ + ++
Sbjct: 90 ELKKLEQEDLEKRQLHEITLINTKIEEVDKTRQHEFEEFKARLGDVQDARQSFRDLVK-- 147
Query: 84 KVKSGVKWVDGFTALIRPLTTFFWIIVYPLL---VWWSVKEGMFNSDPLTLLSPFTQEII 140
+ + W + + F + I +L + + + ++ T
Sbjct: 148 -TGNAIAWAPVI---VSAIIVFGFFITILVLLSNTYDPSENDQVSQIVNIVIGALTAA-F 202
Query: 141 ACILGFWYTDKIVQKKK 157
A ++ FW ++K
Sbjct: 203 ATVVSFWLGSSQGSRQK 219
>gi|17550768|ref|NP_508523.1| Temporarily Assigned Gene name family member (tag-312)
[Caenorhabditis elegans]
gi|74966415|sp|Q22908|RASEF_CAEEL RecName: Full=Ras and EF-hand domain-containing protein homolog;
Flags: Precursor
gi|13775388|gb|AAK39204.1| Temporarily assigned gene name protein 312, partially confirmed by
transcript evidence [Caenorhabditis elegans]
Length = 656
Score = 37.8 bits (86), Expect = 0.46, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Query: 2 IQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQ----SIEYDKLKLEMAKNDSSTQL 57
+QS L R R + S + + + E ++ E ++E +++ QL
Sbjct: 146 LQSSGVPALLRKFERVVGSFHKELSEKKHENERLQRIYASEREMYNRRMEEMESEVDQQL 205
Query: 58 DLAEIKAGIEELKIDKPIRLARIE 81
+L E+KA EE + +
Sbjct: 206 ELTEMKARQEERDRLTKEKEEMRQ 229
>gi|85703718|ref|ZP_01034822.1| hypothetical protein ROS217_23292 [Roseovarius sp. 217]
gi|85672646|gb|EAQ27503.1| hypothetical protein ROS217_23292 [Roseovarius sp. 217]
Length = 190
Score = 37.8 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 42/114 (36%), Gaps = 14/114 (12%)
Query: 53 SSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGV-----KWVDGFTALIRPLTTFFW 107
+ ++ A +++ + A + +G ++VDG L RP F
Sbjct: 18 IAETAEVFRPNAEKADMREAAFQQAALSQMAAEFTGAPGLWRQFVDGLNRLPRPAMAFGC 77
Query: 108 IIVYPLL----VWWSVKEGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
I ++ VW++ + P L ++ I+ F++ + + K +
Sbjct: 78 IFLFWSAMSDPVWFAERMTGLALVPEPLW-----ALMGAIVAFYFGARELHKFR 126
>gi|149201900|ref|ZP_01878874.1| hypothetical protein RTM1035_05150 [Roseovarius sp. TM1035]
gi|149144948|gb|EDM32977.1| hypothetical protein RTM1035_05150 [Roseovarius sp. TM1035]
Length = 190
Score = 37.8 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 30/72 (41%), Gaps = 9/72 (12%)
Query: 90 KWVDGFTALIRPLTTFFWIIVYPLL----VWWSVKEGMFNSDPLTLLSPFTQEIIACILG 145
++VDG L RP F + ++ +W++ + P L ++ I+
Sbjct: 60 QFVDGLNRLPRPAMAFGCLFLFWSAMSDPIWFAERMTGLALVPEPLW-----ALMGAIVA 114
Query: 146 FWYTDKIVQKKK 157
F++ + + K +
Sbjct: 115 FYFGARELHKFR 126
>gi|146276950|ref|YP_001167109.1| hypothetical protein Rsph17025_0901 [Rhodobacter sphaeroides ATCC
17025]
gi|145555191|gb|ABP69804.1| hypothetical protein Rsph17025_0901 [Rhodobacter sphaeroides ATCC
17025]
Length = 151
Score = 37.8 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 9/95 (9%)
Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVW---- 116
EI+ E ++V+G L RP+ F + ++ +
Sbjct: 22 EIELSAEMQGEALQQYSEEFANPGNGGFDRFVNGVNRLPRPMLAFGTLALFIFAMVDPES 81
Query: 117 WSVKEGMFNSDPLTLLSPFTQEIIACILGFWYTDK 151
+ + P L ++A I+GF++ +
Sbjct: 82 FGRRMSGLALVPDPLW-----WLLAAIVGFYFGSR 111
>gi|308512109|ref|XP_003118237.1| CRE-TAG-312 protein [Caenorhabditis remanei]
gi|308238883|gb|EFO82835.1| CRE-TAG-312 protein [Caenorhabditis remanei]
Length = 650
Score = 37.4 bits (85), Expect = 0.64, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 34/91 (37%), Gaps = 4/91 (4%)
Query: 2 IQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQ----SIEYDKLKLEMAKNDSSTQL 57
+QS L R R + S + + + E ++ E ++E +++ QL
Sbjct: 146 LQSSGVPALLRKFERVVGSFHKELSEKKHENERLQRIYASEREMYNRRMEEMESEVDQQL 205
Query: 58 DLAEIKAGIEELKIDKPIRLARIEAQKVKSG 88
+L E+KA EE + + +
Sbjct: 206 ELTEMKARQEERDRLTKEKEDMRQRMTEEMS 236
>gi|145589302|ref|YP_001155899.1| hypothetical protein Pnuc_1119 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047708|gb|ABP34335.1| hypothetical protein Pnuc_1119 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 177
Score = 37.4 bits (85), Expect = 0.70, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 49/143 (34%), Gaps = 11/143 (7%)
Query: 13 FLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKID 72
F+ I + K+ IE ++L L+ +L++ E K E +
Sbjct: 31 FIESKIGARIPDSPSQEDLIKLKQLEIEQEQLLLQYTLKQ--KELEIEESKLLAEMHRAS 88
Query: 73 KPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVKEGMFNSDPLTLL 132
+ R ++ + IRP T + + Y L S N + LL
Sbjct: 89 QDNATNRWQSDMGSDS-----KLSKNIRPGTLVYILTAYLLFALLSAIGIDINEAYVKLL 143
Query: 133 SPFTQEIIACILGFWYTDKIVQK 155
+ Q ++ ++ + V+K
Sbjct: 144 GEWGQLVMLA----YFGGRSVEK 162
>gi|254450241|ref|ZP_05063678.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198264647|gb|EDY88917.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 191
Score = 37.4 bits (85), Expect = 0.72, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 9/67 (13%)
Query: 90 KWVDGFTALIRPLTTFFWIIVYPLL----VWWSVKEGMFNSDPLTLLSPFTQEIIACILG 145
+++D L RPL F I ++ ++ VW+S + + P L ++ I+
Sbjct: 62 RFMDALNRLPRPLLAFGTIGLFVVVMSDPVWFSTRMQGISLVPDPLW-----WLMGAIVS 116
Query: 146 FWYTDKI 152
F++ +
Sbjct: 117 FYFGARH 123
>gi|54308524|ref|YP_129544.1| hypothetical protein PBPRA1331 [Photobacterium profundum SS9]
gi|46912953|emb|CAG19742.1| Hypothetical protein PBPRA1331 [Photobacterium profundum SS9]
Length = 158
Score = 37.0 bits (84), Expect = 0.83, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 54/154 (35%), Gaps = 19/154 (12%)
Query: 2 IQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAE 61
I + G LF + I F + + ++ I+ + K ++A +++ +
Sbjct: 7 ITDVIGGSLFGSVKELITDYFPPDMSP-EKKAELQRKIDEMEFKKQIAILEATADAEKTL 65
Query: 62 IKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVKE 121
+ E+ ++ I + V L RP+ + + ++Y W
Sbjct: 66 NQRIAEQEGTASDLKQLPIV-------GRIVLFLRGLQRPM--WGFFVMYIDFEW----- 111
Query: 122 GMFNSDPLTLLSPFTQEIIAC--ILGFWYTDKIV 153
F P + I+ +LGF + ++ +
Sbjct: 112 --FTKAPTYTEQQQSALIVINLLVLGFLFGERTI 143
>gi|90415021|ref|ZP_01222982.1| hypothetical protein P3TCK_17527 [Photobacterium profundum 3TCK]
gi|90323891|gb|EAS40494.1| hypothetical protein P3TCK_17527 [Photobacterium profundum 3TCK]
Length = 158
Score = 37.0 bits (84), Expect = 0.88, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 54/154 (35%), Gaps = 19/154 (12%)
Query: 2 IQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAE 61
I + G LF + I F + + ++ I+ + K ++A +++ +
Sbjct: 7 ITDVVGGSLFGSVKELITDYFPPDMSP-EKKAELQRKIDEMEFKKQIAILEAAADAEKTL 65
Query: 62 IKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVKE 121
+ E+ ++ I + V L RP+ + + ++Y W
Sbjct: 66 NQRIAEQEGTASDLKQLPIV-------GRIVLFLRGLQRPM--WGFFVMYIDFEW----- 111
Query: 122 GMFNSDPLTLLSPFTQEIIAC--ILGFWYTDKIV 153
F P + I+ +LGF + ++ +
Sbjct: 112 --FTKAPTYTEQQQSALIVINLLVLGFLFGERTI 143
>gi|282901580|ref|ZP_06309500.1| hypothetical protein CRC_02975 [Cylindrospermopsis raciborskii
CS-505]
gi|281193551|gb|EFA68528.1| hypothetical protein CRC_02975 [Cylindrospermopsis raciborskii
CS-505]
Length = 218
Score = 37.0 bits (84), Expect = 0.89, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 45/115 (39%), Gaps = 7/115 (6%)
Query: 30 SEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGV 89
+ L++++ EY++ + E + + D+ + + +EE + + + +
Sbjct: 29 QKRLSQERQQEYEQRQREHEERQRKHEEDMEQFRISMEETR---KMVAETNKHMGSIT-S 84
Query: 90 KWVDGFTALIRPLTTFFWIIVYPLLVWWS--VKEGMFNSDPLT-LLSPFTQEIIA 141
+W + L+RP + + + S VK + + + EI+A
Sbjct: 85 RWGEFVENLVRPAAVRLFKEQGINVHYTSLEVKAHDYKGSIEIDIWAENDGEIVA 139
>gi|126462357|ref|YP_001043471.1| hypothetical protein Rsph17029_1589 [Rhodobacter sphaeroides ATCC
17029]
gi|126104021|gb|ABN76699.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17029]
Length = 161
Score = 37.0 bits (84), Expect = 0.90, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 13/99 (13%)
Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKW----VDGFTALIRPLTTFFWIIVYPLLVW 116
+E + L + + G W V+G L RP+ F + ++ +
Sbjct: 31 NATRALELSAEVQGEALQQYSEEFANPGNGWFDRFVNGVNRLPRPMLAFGTLALFIFAMV 90
Query: 117 ----WSVKEGMFNSDPLTLLSPFTQEIIACILGFWYTDK 151
+ + P L ++A I+GF++ +
Sbjct: 91 DPESFGRRMSGLALVPDPLW-----WLLAAIVGFYFGSR 124
>gi|169611388|ref|XP_001799112.1| hypothetical protein SNOG_08805 [Phaeosphaeria nodorum SN15]
gi|160702279|gb|EAT83973.2| hypothetical protein SNOG_08805 [Phaeosphaeria nodorum SN15]
Length = 626
Score = 37.0 bits (84), Expect = 0.94, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 99 IRPLTTFFWIIVYPLLVWWSVKEGMFNSDPLTLLSPFTQEIIACI--LGFWYTDKIVQKK 156
+R L T +W + + DPL + + T I+A I + FW+ + K+
Sbjct: 538 MRSLVTSYWHFMSAFSNALGQAFVSLSEDPLLVWNYTTVAILAFIGGVLFWFHQRPTDKQ 597
>gi|159044305|ref|YP_001533099.1| putative carboxylesterase [Dinoroseobacter shibae DFL 12]
gi|157912065|gb|ABV93498.1| putative carboxylesterase [Dinoroseobacter shibae DFL 12]
Length = 173
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 36/112 (32%), Gaps = 16/112 (14%)
Query: 48 MAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFW 107
++ Q + A + + + A + +DG + RP F
Sbjct: 27 RENAEAGAQREHALTTGALAQFAAEFAGNRASRFDRV-------IDGLNRVPRPALAFGT 79
Query: 108 IIVYPLLV----WWSVKEGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQK 155
+ ++ + W++ + P L ++ I+ F++ + K
Sbjct: 80 LGLFVSAMTDPDWFAARMAGMALVPEPLW-----WLLGAIVSFYFGARHQSK 126
>gi|268578667|ref|XP_002644316.1| C. briggsae CBR-TAG-312 protein [Caenorhabditis briggsae]
gi|74790193|sp|Q619T5|RASEF_CAEBR RecName: Full=Ras and EF-hand domain-containing protein homolog;
Flags: Precursor
gi|309371281|emb|CAP32754.3| CBR-TAG-312 protein [Caenorhabditis briggsae AF16]
Length = 634
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 2 IQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQ----SIEYDKLKLEMAKNDSSTQL 57
+QS L R R + S + + + E ++ E ++E +++ QL
Sbjct: 146 LQSSGVPALLRKFERVVGSFHKELSEKKHENERLQRIYASEREMYNRRMEEMESEVDQQL 205
Query: 58 DLAEIKAGIEELKIDKPIR 76
+L E+KA EE + +
Sbjct: 206 ELIEMKARQEERERLTKEK 224
>gi|332558381|ref|ZP_08412703.1| hypothetical protein RSWS8N_04980 [Rhodobacter sphaeroides WS8N]
gi|332276093|gb|EGJ21408.1| hypothetical protein RSWS8N_04980 [Rhodobacter sphaeroides WS8N]
Length = 161
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 13/99 (13%)
Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKW----VDGFTALIRPLTTFFWIIVYPLLVW 116
+E + L + + G W V+G L RP+ F + ++ +
Sbjct: 31 NATRALELSAEVQGEALQQYSEEFANPGNGWFDRFVNGVNRLPRPMLAFGTLALFIFAMV 90
Query: 117 ----WSVKEGMFNSDPLTLLSPFTQEIIACILGFWYTDK 151
+ + P L ++A I+GF++ +
Sbjct: 91 DPESFGRRMSGLALVPDPLW-----WLLAAIVGFYFGSR 124
>gi|77463501|ref|YP_353005.1| hypothetical protein RSP_6081 [Rhodobacter sphaeroides 2.4.1]
gi|77387919|gb|ABA79104.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
Length = 161
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 13/99 (13%)
Query: 61 EIKAGIEELKIDKPIRLARIEAQKVKSGVKW----VDGFTALIRPLTTFFWIIVYPLLVW 116
+E + L + + G W V+G L RP+ F + ++ +
Sbjct: 31 NATRALELSAEVQGEALQQYSEEFANPGNGWFDRFVNGVNRLPRPMLAFGTLALFIFAMV 90
Query: 117 ----WSVKEGMFNSDPLTLLSPFTQEIIACILGFWYTDK 151
+ + P L ++A I+GF++ +
Sbjct: 91 DPESFGRRMSGLALVPDPLW-----WLLAAIVGFYFGSR 124
>gi|218148591|ref|YP_002364359.1| hypothetical protein PP141_gp51 [Pseudomonas phage 14-1]
gi|218059787|emb|CAU13900.1| hypothetical protein [Pseudomonas phage 14-1]
Length = 201
Score = 36.2 bits (82), Expect = 1.3, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 5/108 (4%)
Query: 41 YDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIR 100
+L+ + + + E+ ++ + EA S + +R
Sbjct: 60 LAELQSAERVRLQELAIQAEQNRLQSEQNQLQAELSQFAAEAADRDSARRLAAQQNDFVR 119
Query: 101 PLTTFFWIIVYPLLVWWSVKEGMFNSDPLTLLSPFTQEIIACILGFWY 148
P TF + L++ G L+ P + I I+G+W+
Sbjct: 120 PAITFALLTGSILIIIAIFTFGR-----EALMDPTSSVAIGTIIGYWF 162
>gi|282901581|ref|ZP_06309501.1| hypothetical protein CRC_02976 [Cylindrospermopsis raciborskii
CS-505]
gi|281193552|gb|EFA68529.1| hypothetical protein CRC_02976 [Cylindrospermopsis raciborskii
CS-505]
Length = 239
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
Query: 30 SEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGV 89
+ +++ E ++ + E + + D+ + + +EE + + + +
Sbjct: 50 RQRENEQRQRENEQRQREYEERQRKHEEDMEQFRISMEETR---KMVAETNKHMGSIT-S 105
Query: 90 KWVDGFTALIRPLTTFFWIIVYPLLVWWS--VKEGMFNSDPLT-LLSPFTQEIIA 141
+W + L+RP + + + S VK + + + EI+A
Sbjct: 106 RWGEFVENLVRPAAVRLFKEQSINVHYTSLQVKAHDYKGSIEIDIWAENDGEIVA 160
>gi|119386683|ref|YP_917738.1| hypothetical protein Pden_3976 [Paracoccus denitrificans PD1222]
gi|119377278|gb|ABL72042.1| conserved hypothetical protein [Paracoccus denitrificans PD1222]
Length = 176
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 37/105 (35%), Gaps = 13/105 (12%)
Query: 55 TQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKW----VDGFTALIRPLTTFFWIIV 110
+L +E + +A++ ++ W ++G L RPL T + +
Sbjct: 25 AELLRENATRRMELDEEAHARAIAQLSSEFAARPCGWFDGMMNGLNRLPRPLMTLGTVGL 84
Query: 111 YPLL----VWWSVKEGMFNSDPLTLLSPFTQEIIACILGFWYTDK 151
+ + ++ + P L ++ I+ F++ +
Sbjct: 85 FAYAMADPEGFGLRMQNLDLVPEPLW-----WLLGAIISFYFGAR 124
>gi|221639362|ref|YP_002525624.1| hypothetical protein RSKD131_1263 [Rhodobacter sphaeroides KD131]
gi|221160143|gb|ACM01123.1| Hypothetical Protein RSKD131_1263 [Rhodobacter sphaeroides KD131]
Length = 161
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 13/85 (15%)
Query: 75 IRLARIEAQKVKSGVKW----VDGFTALIRPLTTFFWIIVYPLLVW----WSVKEGMFNS 126
L + + G W V+G L RP+ F + ++ + + +
Sbjct: 45 EALQQYSEEFANPGNGWFDRFVNGVNRLPRPMLAFGTLALFIFAMVDPESFGRRMSGLAL 104
Query: 127 DPLTLLSPFTQEIIACILGFWYTDK 151
P L ++A I+GF++ +
Sbjct: 105 VPDPLW-----WLLAAIVGFYFGSR 124
>gi|254437235|ref|ZP_05050729.1| hypothetical protein OA307_2105 [Octadecabacter antarcticus 307]
gi|198252681|gb|EDY76995.1| hypothetical protein OA307_2105 [Octadecabacter antarcticus 307]
Length = 191
Score = 35.9 bits (81), Expect = 1.7, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 9/67 (13%)
Query: 90 KWVDGFTALIRPLTTFFWIIVYPLL----VWWSVKEGMFNSDPLTLLSPFTQEIIACILG 145
+++D L RPL F I ++ + VW+S + + P L ++ I+
Sbjct: 62 RFMDALNRLPRPLLAFGTIGLFVVAMADPVWFSTRMQGISLVPDPLW-----WLMGAIVS 116
Query: 146 FWYTDKI 152
F++ +
Sbjct: 117 FYFGARH 123
>gi|294676113|ref|YP_003576728.1| hypothetical protein RCAP_rcc00556 [Rhodobacter capsulatus SB 1003]
gi|294474933|gb|ADE84321.1| conserved hypothetical protein [Rhodobacter capsulatus SB 1003]
Length = 164
Score = 35.9 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 29/72 (40%), Gaps = 9/72 (12%)
Query: 90 KWVDGFTALIRPLTTFFWIIVYPLLVW--WSVKEGMF--NSDPLTLLSPFTQEIIACILG 145
++V+G L RP+ + ++ + + M N+ P L ++ I+G
Sbjct: 64 RFVNGLNRLPRPMLALGTLGLFVYAMIDPTGFETRMVGLNAVPEPLW-----WLLGAIVG 118
Query: 146 FWYTDKIVQKKK 157
F++ + +
Sbjct: 119 FYFGAREFHYNR 130
>gi|149408364|ref|YP_001294467.1| hypothetical protein ORF050 [Pseudomonas phage F8]
gi|197261377|ref|YP_002154193.1| hypothetical protein LBL3_gp48 [Pseudomonas phage LBL3]
gi|197261469|ref|YP_002154284.1| hypothetical protein LMA2_gp50 [Pseudomonas phage LMA2]
gi|218457853|ref|YP_002418858.1| hypothetical protein PPSN_gp52 [Pseudomonas phage SN]
gi|219523921|ref|YP_002455982.1| hypothetical protein PB1_gp52 [Pseudomonas phage PB1]
gi|190333517|gb|ACE73772.1| conserved hypothetical protein [Pseudomonas phage PB1]
gi|197244467|emb|CAR31202.1| hypothetical protein [Pseudomonas phage LBL3]
gi|197244559|emb|CAR31293.1| hypothetical protein [Pseudomonas phage LMA2]
gi|218379121|emb|CAT99705.1| hypothetical protein [Pseudomonas phage SN]
gi|294663791|gb|ADF29345.1| hypothetical protein PJG24_052 [Pseudomonas phage JG024]
Length = 201
Score = 35.9 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 5/108 (4%)
Query: 41 YDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIR 100
+L+ + + + E+ ++ + EA S + +R
Sbjct: 60 LAELQSAERVRLQELAIQAEQNRLQSEQNQLQAELSQFAAEAADRDSARRLAAQQNDFVR 119
Query: 101 PLTTFFWIIVYPLLVWWSVKEGMFNSDPLTLLSPFTQEIIACILGFWY 148
P TF + L++ G L+ P + I I+G+W+
Sbjct: 120 PAITFALLTGSILIIIAIFTFGR-----EALMDPTSSVAIGTIIGYWF 162
>gi|39940612|ref|XP_359843.1| hypothetical protein MGG_04934 [Magnaporthe oryzae 70-15]
gi|145010831|gb|EDJ95487.1| hypothetical protein MGG_04934 [Magnaporthe oryzae 70-15]
Length = 639
Score = 35.9 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 99 IRPLTTFFWIIVYPLLVWWSVKEGMFNSDPLTLLSPFTQEIIACI--LGFWYTDKIVQKK 156
+R + T + +V + +DPL + T I++ + + FW+ + + K+
Sbjct: 510 MRGMVTGVFWLVNSISAALGFAFVGLATDPLLVWLYTTVAIVSAVGGIAFWFCFRKLDKR 569
>gi|84503074|ref|ZP_01001170.1| hypothetical protein OB2597_01337 [Oceanicola batsensis HTCC2597]
gi|84388618|gb|EAQ01490.1| hypothetical protein OB2597_01337 [Oceanicola batsensis HTCC2597]
Length = 173
Score = 35.9 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 16/154 (10%), Positives = 41/154 (26%), Gaps = 35/154 (22%)
Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAG 65
L G LF + ++ + + D++ + ++ + + +
Sbjct: 3 LIGSLFALAFGGGRNAIRETAEIFRKNAENAGERDLDRMAAALEQHAAEFRDRRSAFDIV 62
Query: 66 IEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSVKEGM-- 123
+DG L RP+ I ++ + V
Sbjct: 63 --------------------------MDGVNRLPRPMLALGTIGLFVSAMMEPVWFADRM 96
Query: 124 --FNSDPLTLLSPFTQEIIACILGFWYTDKIVQK 155
P L ++ ++ F++ + K
Sbjct: 97 QGLALVPEPLW-----WLMGAVVSFYFGARHQAK 125
>gi|83593471|ref|YP_427223.1| hypothetical protein Rru_A2136 [Rhodospirillum rubrum ATCC 11170]
gi|83576385|gb|ABC22936.1| hypothetical protein Rru_A2136 [Rhodospirillum rubrum ATCC 11170]
Length = 190
Score = 35.5 bits (80), Expect = 2.2, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 8/92 (8%)
Query: 70 KIDKPIRLARIEAQKVKSGVKW---VDGFTALIRPLTTFFWIIV--YPLLVWWSVKEGMF 124
+ + + + E+ W VDG L RPL F + + + L E M
Sbjct: 38 ETLRQLEIYGAESAGRSGATAWDSLVDGLNRLPRPLMAFAVMAMMVWAPLDPIGFAEAMR 97
Query: 125 NSDPLTLLSPFTQEIIACILGFWYTDKIVQKK 156
+ T + + F++T + +K+
Sbjct: 98 AYALVPEWLATT--LF-GVAAFYFTARHFEKR 126
>gi|193213993|ref|YP_001995192.1| hypothetical protein Ctha_0274 [Chloroherpeton thalassium ATCC
35110]
gi|193087470|gb|ACF12745.1| conserved hypothetical protein [Chloroherpeton thalassium ATCC
35110]
Length = 133
Score = 35.5 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 46 LEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTF 105
+ S+T + ++KA IE L D R+A +++K+ + + +RPL
Sbjct: 19 GKAVDAASTTDEERLQLKAQIEALVYDHSNRMAAELTERLKADMASDNWLAKSVRPLLLI 78
Query: 106 FWIIVYPLLVWWSVKEGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQK 155
+++ L G F + P +EI+ + F++ + ++K
Sbjct: 79 GSFVLFFLASLADGNFGGF--QIKDIYIPIYKEIMLTGVMFYFGSRGIEK 126
>gi|89054824|ref|YP_510275.1| hypothetical protein Jann_2333 [Jannaschia sp. CCS1]
gi|88864373|gb|ABD55250.1| hypothetical protein Jann_2333 [Jannaschia sp. CCS1]
Length = 183
Score = 35.1 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 14/122 (11%), Positives = 40/122 (32%), Gaps = 13/122 (10%)
Query: 44 LKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVKW----VDGFTALI 99
+ + +++ + +E L A+ +G W ++G +
Sbjct: 12 AQGIGEAAEGLSEVFIPNATRAMELAAEIHEATLETAAAEFEHAGDSWFDRVINGLNRMP 71
Query: 100 RPLTTFFWIIVYPLL----VWWSVKEGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQK 155
RP+ + ++ V +S + P L ++ I+ F++ + +
Sbjct: 72 RPMLALGTLGLFVYAMAEPVGFSARMVGLQDVPEPLW-----WLLGAIVSFYFGARELHY 126
Query: 156 KK 157
+
Sbjct: 127 SR 128
>gi|217978042|ref|YP_002362189.1| Lytic transglycosylase catalytic [Methylocella silvestris BL2]
gi|217503418|gb|ACK50827.1| Lytic transglycosylase catalytic [Methylocella silvestris BL2]
Length = 715
Score = 35.1 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 23/175 (13%), Positives = 53/175 (30%), Gaps = 23/175 (13%)
Query: 6 LAGGLFRFLLR-FIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAE--I 62
L L + +++ D V++ E K+ +E K + Q +LA
Sbjct: 11 LVPQLLQLFSGDKAGQIGQKVADAVTQITKTDSPEEATKIVMEDPKIKADLQAELARIAF 70
Query: 63 KAGIEELKIDKPIRLARIEAQKVKSGV-----KWVDGFTAL------IRPLTTFFWIIVY 111
+ + R A ++A + + ++ + A + +F +I +
Sbjct: 71 AGQQAAFQDAQNQREADLKADTLANESTAGARRFAEALAATSPLMQWTPTVISFMVVIGF 130
Query: 112 PLLVWWSVKEGMFNS---------DPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
L+ + +L A ++ FW + + K
Sbjct: 131 LALLTLMTLGKAVLPPQGVDPTILQIVNILIGALAAAFATVMNFWLGSSLGSRGK 185
>gi|304413115|ref|ZP_07394588.1| recombination limiting protein [Candidatus Regiella insecticola
LSR1]
gi|304283958|gb|EFL92351.1| recombination limiting protein [Candidatus Regiella insecticola
LSR1]
Length = 443
Score = 35.1 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 7 AGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGI 66
AG L LL ++ + + ++ + + ++ L+L + +S+ + +L E+K +
Sbjct: 12 AGCLLSVLLGWLVAASIEKLKQLAYWRDQCHKLD-TALQL-QREENSAQKTELREMKVRL 69
Query: 67 EELKIDKPIRLARIEAQKVKSGVKW 91
EE + + + + + ++
Sbjct: 70 EETRTAAEEKQHLLLNSEQRLTSQF 94
>gi|307167503|gb|EFN61076.1| Chromosome-associated kinesin KIF4 [Camponotus floridanus]
Length = 1271
Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 30/60 (50%)
Query: 31 EYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSGVK 90
+ +K++ E ++K++ K ++ + + E A + LK ++ ++ Q+ K+ K
Sbjct: 669 KAQDRKRACEMVRMKMQHNKQENVFKRKMEEAFAVNKRLKGALEMQKKAMQRQESKANSK 728
>gi|260433842|ref|ZP_05787813.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417670|gb|EEX10929.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 191
Score = 34.7 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 35/97 (36%), Gaps = 10/97 (10%)
Query: 64 AGIEELKIDKPIRLARIEAQKVKSG-VKWVDGFTALIRPLTTFFWIIVYPLLV----WWS 118
A E++ + A K G +++DG L RP + ++ + W++
Sbjct: 35 ARDVEMRGQAMSQFGAEFAVPRKGGFDRFMDGLNRLPRPALALGTLGLFVAAMVDPLWFA 94
Query: 119 VKEGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQK 155
+ P L ++ I+ F++ + K
Sbjct: 95 ARMQGIALVPEPLW-----WLLGVIVSFYFGARHQAK 126
>gi|145519018|ref|XP_001445378.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412828|emb|CAK77981.1| unnamed protein product [Paramecium tetraurelia]
Length = 429
Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 23 ERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARI-E 81
E I V +Y ++ +E + E + + +L EI+ IEEL+ + ++ I +
Sbjct: 236 EEINKVRQQYESQLNELEQAYNEKEQQLEQIAQEFNLEEIQKKIEELQQESDMKDQIIEQ 295
Query: 82 AQKVKSGVK 90
Q+ +
Sbjct: 296 YQQQLQDIG 304
>gi|108862685|gb|ABA98546.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1800
Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats.
Identities = 11/90 (12%), Positives = 33/90 (36%), Gaps = 5/90 (5%)
Query: 14 LLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDK 73
L +F+ + I+ + + + ++ ++ +L ++ K
Sbjct: 1034 LDKFVVVFIDDILIYSQSEEDHQHHLRL--VLGKLREHQLYAKLSKLTAVTDWKQPKTVT 1091
Query: 74 PIRLARIEAQKVKSGVKWVDGFTALIRPLT 103
+R A + +++ F+ + RP+T
Sbjct: 1092 QVRSFLGLAGYYRR---FIENFSKIARPMT 1118
>gi|89067795|ref|ZP_01155249.1| hypothetical protein OG2516_01299 [Oceanicola granulosus HTCC2516]
gi|89046765|gb|EAR52820.1| hypothetical protein OG2516_01299 [Oceanicola granulosus HTCC2516]
Length = 179
Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 9/68 (13%)
Query: 92 VDGFTALIRPLTTFFWIIVYPLL----VWWSVKEGMFNSDPLTLLSPFTQEIIACILGFW 147
+DG L RP+ F + ++ + VW++ + P L ++ I+ F+
Sbjct: 64 IDGLNRLPRPMLAFGTLGLFVVAMADPVWFAGRMQGLALVPEPLW-----WLMGAIVSFY 118
Query: 148 YTDKIVQK 155
+ + K
Sbjct: 119 FGARHQAK 126
>gi|84515583|ref|ZP_01002945.1| hypothetical protein SKA53_02956 [Loktanella vestfoldensis SKA53]
gi|84510866|gb|EAQ07321.1| hypothetical protein SKA53_02956 [Loktanella vestfoldensis SKA53]
Length = 156
Score = 34.3 bits (77), Expect = 5.4, Method: Composition-based stats.
Identities = 12/97 (12%), Positives = 30/97 (30%), Gaps = 9/97 (9%)
Query: 65 GIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLLV----WWSVK 120
+ A + + VD L RP+ I ++ + + ++
Sbjct: 30 DADAKSESLQQFAAEFVHARQGLFDRAVDALNRLPRPMLALGTIWLFVMAMLDPDGFAAG 89
Query: 121 EGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157
P L ++ I+ F++ + K++
Sbjct: 90 MAGLALVPEPLW-----WLMGAIVSFYFGARHQAKEQ 121
>gi|332534699|ref|ZP_08410528.1| GGDEF and EAL domain proteins [Pseudoalteromonas haloplanktis
ANT/505]
gi|332035849|gb|EGI72332.1| GGDEF and EAL domain proteins [Pseudoalteromonas haloplanktis
ANT/505]
Length = 651
Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 17/171 (9%), Positives = 49/171 (28%), Gaps = 19/171 (11%)
Query: 3 QSFLAGGLFRFLLRFIPSGFERI--------VDVVSEYLTKKQSIEYDKLKLEMAKNDSS 54
Q L + FI S + + + S+ +L+
Sbjct: 19 QELWIALLIVIFVGFISSVLISTNSAKSYFSTQLYLKNVDNASSLALMISQLDKDPVALE 78
Query: 55 TQLDLAEIKAGIEELKIDKPIRLARIE----AQKVKSGVKWVDGFTAL-IRPLTTFF--- 106
+ + +++ P ++ + + +W L ++P
Sbjct: 79 LLVSATFDTGHYKRIELQNPNGEVIVKRTFTDELKATAPQWFRAMYGLNVQPGVGQVNNG 138
Query: 107 ---WIIVYPLLVWWSVKEGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQ 154
+ ++ ++ ++ S S ACI+ ++ +I++
Sbjct: 139 WQQFGTLFIESHSQYAEQALWESALKLFFSFLIVAFFACIVSAYFLSRILK 189
>gi|126731375|ref|ZP_01747182.1| hypothetical protein SSE37_06899 [Sagittula stellata E-37]
gi|126708286|gb|EBA07345.1| hypothetical protein SSE37_06899 [Sagittula stellata E-37]
Length = 183
Score = 34.3 bits (77), Expect = 5.9, Method: Composition-based stats.
Identities = 13/109 (11%), Positives = 35/109 (32%), Gaps = 15/109 (13%)
Query: 57 LDLAEIKAGIEELKIDKPIRLARIEAQKVKSGV--KW----VDGFTALIRPLTTFFWIIV 110
++ + A + ++ + A + W +D + RP + +
Sbjct: 20 AEVFRVNAEQDAVREAMAQQAALGQFGTEFRVADRGWFDRLMDALNRIPRPAMALGTMGL 79
Query: 111 YPLL----VWWSVKEGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQK 155
+ VW++ + P L ++ I+ F++ + K
Sbjct: 80 FVAAMVDPVWFAARMAGIALVPEPLW-----WLLGAIVSFYFGARHQAK 123
>gi|297667704|ref|XP_002812121.1| PREDICTED: transmembrane protein ENSP00000343375-like [Pongo
abelii]
Length = 322
Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 43/123 (34%), Gaps = 12/123 (9%)
Query: 34 TKKQSIEYDKLKLEMAKNDSSTQLDLAE----IKAGIEELKIDKPIRLARIEAQKVKSGV 89
+ +E +K+++E + E + +E+L+ ++ ++ + Q+ +
Sbjct: 99 ERNPEMELEKVRMEFELTRLKYLHEENERQRQHEVVMEQLQRERQHKVVMEQLQQEAAPR 158
Query: 90 KWVDGFTALIRPLTTFFWIIVYPLLVWWSVKEGMFNSDPLTLLSPFTQEIIACIL----- 144
+ G + P F +Y + + + L + IA IL
Sbjct: 159 LFSGGLQNFLLPQNQFAMF-LYCFIFIHIIY--VTKEMVFFLFAKHYLFCIAAILLCLIK 215
Query: 145 GFW 147
FW
Sbjct: 216 TFW 218
>gi|221041650|dbj|BAH12502.1| unnamed protein product [Homo sapiens]
Length = 601
Score = 33.9 bits (76), Expect = 6.5, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Query: 29 VSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSG 88
+ K+ S+E +K K+E + Q L E+K IE LK+ + I +
Sbjct: 484 FKDTDMKRLSMEIEKEKVEYMEKSKHLQEQLNELKTEIEALKLKERETALDILHNENSDR 543
Query: 89 VKWVDGFTALIRPLTTFFWIIVYP 112
I+ F+ I++
Sbjct: 544 GG--SSKHNTIKKGMFLFFFILFC 565
>gi|109897032|ref|YP_660287.1| hypothetical protein Patl_0705 [Pseudoalteromonas atlantica T6c]
gi|109699313|gb|ABG39233.1| conserved hypothetical protein [Pseudoalteromonas atlantica T6c]
Length = 161
Score = 33.9 bits (76), Expect = 6.8, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 41/144 (28%), Gaps = 17/144 (11%)
Query: 16 RFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPI 75
F + I L+ + +K +E+A + A EE +
Sbjct: 14 GFGEKIVDGIQAYFPPSLS-----DAEKANIELAIKQHVHAATMDLQSAAQEERQQFDDR 68
Query: 76 RLARIEAQKVKSGVKW----VDGFTALIRPLTTFFWIIVYPLLVWW-SVKEGMFNSDPLT 130
+ W + RP+ + +Y L W+ + +
Sbjct: 69 IKELEGTASDLARFGWLGSIIIFLRGCQRPIWGYL--TLYMDLCWFSGKWGELTSQQESA 126
Query: 131 LLSPFTQEIIACILGFWYTDKIVQ 154
+ +LGF + ++ ++
Sbjct: 127 FW-----IVNLLVLGFMFGERAIK 145
>gi|297260829|ref|XP_002798368.1| PREDICTED: merlin-like [Macaca mulatta]
Length = 601
Score = 33.9 bits (76), Expect = 6.9, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Query: 29 VSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKVKSG 88
+ K+ S+E +K K+E + Q L E+K IE LK+ + I +
Sbjct: 484 FKDTDMKRLSMEIEKEKVEYMEKSKHLQEQLNELKTEIEALKLKERETALDILHNENSDR 543
Query: 89 VKWVDGFTALIRPLTTFFWIIVYP 112
I+ F+ I++
Sbjct: 544 GG--SSKHNTIKKGMFLFFFILFC 565
>gi|302503021|ref|XP_003013471.1| hypothetical protein ARB_00289 [Arthroderma benhamiae CBS 112371]
gi|291177035|gb|EFE32831.1| hypothetical protein ARB_00289 [Arthroderma benhamiae CBS 112371]
Length = 572
Score = 33.9 bits (76), Expect = 6.9, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 31/89 (34%), Gaps = 1/89 (1%)
Query: 38 SIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDKPIRLARIEAQKV-KSGVKWVDGFT 96
+ + L+ E+ ST D A + + + + I + R + Q G W
Sbjct: 56 ELTLEALRAEVEAAVVSTGQDTAYDRKSMVINRAVQDIGMGRYQWQLFVLCGFGWFADNE 115
Query: 97 ALIRPLTTFFWIIVYPLLVWWSVKEGMFN 125
+ +R T +I + + W +
Sbjct: 116 SHVRFTTCALFIGLCLGSIIWGTASDIIG 144
>gi|256389376|ref|YP_003110940.1| GAF sensor hybrid histidine kinase [Catenulispora acidiphila DSM
44928]
gi|256355602|gb|ACU69099.1| GAF sensor hybrid histidine kinase [Catenulispora acidiphila DSM
44928]
Length = 1119
Score = 33.9 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 29/96 (30%)
Query: 14 LLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIKAGIEELKIDK 73
LL + + E +++ + +LE + Q E+K E +
Sbjct: 607 LLGESRRLADELKARTDELQMQQKELRRSNAELEEKAELLARQNQDIEVKNSEIEQARQE 666
Query: 74 PIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWII 109
A + +++ + +R I+
Sbjct: 667 LEERANQLTMSSRYKSEFLANMSHELRTPLNSLLIL 702
>gi|301098796|ref|XP_002898490.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104915|gb|EEY62967.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 510
Score = 33.6 bits (75), Expect = 8.9, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 39/105 (37%), Gaps = 5/105 (4%)
Query: 6 LAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIE-YDKLKLEMAKNDSSTQLDLAEIKA 64
+ G L L E+ D+ TK+ E +K + + + + + ++A ++A
Sbjct: 159 MFGALMGHL-GKAKRQIEKDTDLFKRQDTKQHEAEQREKKQSQNLEIQARYEAEVARLEA 217
Query: 65 GIEELKIDKPIRLARI---EAQKVKSGVKWVDGFTALIRPLTTFF 106
I ++D+ ++ R Q ++ + P +
Sbjct: 218 SIARTELDRSEQITRAKLEHLQMLRKSASQSKFLVTIASPPIYYL 262
>gi|268580989|ref|XP_002645477.1| C. briggsae CBR-KQT-2 protein [Caenorhabditis briggsae]
gi|187021558|emb|CAP39247.1| CBR-KQT-2 protein [Caenorhabditis briggsae AF16]
Length = 638
Score = 33.6 bits (75), Expect = 9.7, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 44/112 (39%), Gaps = 2/112 (1%)
Query: 3 QSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEI 62
Q+ + + +F + + D + +K S+ + ++ A+ +S+
Sbjct: 382 QNSVTAEILKFGFKGMARPMLEKQDSF-DKGERKISLRRTRKRVLFAEARNSSVETSMSS 440
Query: 63 KAGIEELKIDKPIRLARIEAQKVKSGVKWVDGFTALIRPLTTFFWIIVYPLL 114
+ EL+ I+ + + K VD RPL F++ I++ L+
Sbjct: 441 SVDVSELETQFEIKNFLEQN-VDELSSKEVDSLLMKYRPLLRFYYFIMFRLI 491
>gi|255263199|ref|ZP_05342541.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
gi|255105534|gb|EET48208.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
Length = 175
Score = 33.6 bits (75), Expect = 9.9, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 5/87 (5%)
Query: 75 IRLARIEAQKVKSGVKW----VDGFTALIRPLTTFFWIIVYPLLVWWSVKEGMFNSDPLT 130
LA+ A+ S W +DG L RP F + ++ + + V
Sbjct: 43 QALAQYAAEFAHSRKSWFDRAMDGMNRLPRPRLAFGTLGLFVVAMIDPVWFASRMQGIAL 102
Query: 131 LLSPFTQEIIACILGFWYTDKIVQKKK 157
+ P ++ I+ F++ + K +
Sbjct: 103 VPDPLWW-LMGAIVSFYFGARHQVKAQ 128
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.312 0.129 0.328
Lambda K H
0.267 0.0397 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,023,184,297
Number of Sequences: 14124377
Number of extensions: 26014133
Number of successful extensions: 201289
Number of sequences better than 10.0: 302
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 226
Number of HSP's that attempted gapping in prelim test: 201051
Number of HSP's gapped (non-prelim): 383
length of query: 157
length of database: 4,842,793,630
effective HSP length: 119
effective length of query: 38
effective length of database: 3,161,992,767
effective search space: 120155725146
effective search space used: 120155725146
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.9 bits)
S2: 75 (33.5 bits)