RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254781202|ref|YP_003065615.1| hypothetical protein
CLIBASIA_05545 [Candidatus Liberibacter asiaticus str. psy62]
         (864 letters)



>d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 208

 Score = 33.9 bits (77), Expect = 0.048
 Identities = 24/162 (14%), Positives = 56/162 (34%), Gaps = 7/162 (4%)

Query: 288 MEHFGVSTNVNTILTSELASL--SKDIVIARELGPNA----DSFVKQMIVQTIANDQEAS 341
           +E F     +  +++  + +   +K+I + REL  N+    D    + +      D    
Sbjct: 1   VETFAFQAEIAQLMSLIINTFYSNKEIFL-RELISNSSDALDKIRYESLTDPSKLDSGKE 59

Query: 342 AGNKVLKDWLGRNKLEVRQEAMLQMWEVMRYGETVENTGWANWMAGLRSAAGASMLGQHP 401
               ++ +   R    V     +   +++    T+  +G   +M  L++ A  SM+GQ  
Sbjct: 60  LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 119

Query: 402 IGALLEDGFISRQMLSRVGIDKEAIQRINKMPLKERMELLSD 443
           +G         +  +     D E     +       +   + 
Sbjct: 120 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTG 161


>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase
           (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId:
           4081]}
          Length = 428

 Score = 31.9 bits (71), Expect = 0.23
 Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 193 ENRIPQPMSVDKLRATKKDDFVRSMLDWL-DLSRYKDIDGTPLSRSEIASFVGEVFAERV 251
           EN++   +  D ++   K       +     ++ ++D  G P  R  IA F+ +    RV
Sbjct: 45  ENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRV 104

Query: 252 R 252
           R
Sbjct: 105 R 105


>d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis,
           brefeldin A esterase [TaxId: 1423]}
          Length = 358

 Score = 31.3 bits (69), Expect = 0.30
 Identities = 7/31 (22%), Positives = 11/31 (35%), Gaps = 3/31 (9%)

Query: 501 GRMTDTYASLKDLKADPRLDPSIKAFFKQLD 531
           GR+ D        + DPR  P++        
Sbjct: 2   GRLGD---ESSGPRTDPRFSPAMVEALATFG 29


>d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId:
           1831]}
          Length = 317

 Score = 28.6 bits (62), Expect = 1.9
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 516 DPRLDPSIKAFFKQLDDTDFTVIKRAKAM 544
            P LDP + A    L   DF  +  A+A 
Sbjct: 3   FPTLDPELAAALTMLPKVDFADLPNARAT 31


>d1lm5a_ d.211.2.1 (A:) Desmoplakin intermediate filament-binding
           domains {Human (Homo sapiens) [TaxId: 9606]}
          Length = 196

 Score = 27.6 bits (61), Expect = 4.5
 Identities = 17/118 (14%), Positives = 33/118 (27%), Gaps = 10/118 (8%)

Query: 572 RMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKVSNKM----HALVLD 627
           ++S      R  + +       + Q     +      +   L+D VS  +     A  L 
Sbjct: 15  KISITEGIERGIVDSITGQRLLEAQACTGGIIHPTTGQKLSLQDAVSQGVIDQDMATRLK 74

Query: 628 NVQTSVRGAMHT------SLFDRQRLGLLTYKRGTRAGEALRMFQQFTTTPTGMFLNI 679
             Q +  G          S  +  +   L Y+ G R  E   +            ++ 
Sbjct: 75  PAQKAFIGFEGVKGKKKMSAAEAVKEKWLPYEAGQRFLEFQYLTGGLVDPEVHGRIST 132


>d1k4ta3 e.15.1.1 (A:201-430) Eukaryotic DNA topoisomerase I,
           N-terminal DNA-binding fragment {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 230

 Score = 27.4 bits (61), Expect = 5.4
 Identities = 11/65 (16%), Positives = 31/65 (47%), Gaps = 10/65 (15%)

Query: 559 IKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERK----EINILK 614
           I NL   D   +        Y + + +  K +S E++ +++++   L ++     ++  K
Sbjct: 94  ITNLSKCDFTQM------SQYFKAQTEARKQMSKEEKLKIKEENEKLLKEYGFCIMDNHK 147

Query: 615 DKVSN 619
           ++++N
Sbjct: 148 ERIAN 152


>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2
           {Cow (Bos taurus) [TaxId: 9913]}
          Length = 364

 Score = 26.6 bits (58), Expect = 8.4
 Identities = 26/186 (13%), Positives = 58/186 (31%), Gaps = 27/186 (14%)

Query: 447 YAEGVVAHGRNMMEGSDAFQIGH--KLHSKMHKWSGAEYLDKKRISSHA------LIVYN 498
           ++ G +     ++ G   F+       H                 S         L+  +
Sbjct: 190 FSLGCMLF--KLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRD 247

Query: 499 QIGRMTDTYASLKDLKADPRLDPSIKAFFKQLDDTDFTVIKRAKAMSSPD-GYLYARTPS 557
              R+       +++K  P        FF+ LD      +++      P  G + A    
Sbjct: 248 VNRRLGCLGRGAQEVKESP--------FFRSLD-WQMVFLQKYPPPLIPPRGEVNAADAF 298

Query: 558 TIKNLKDADLRDLARMSDKIAYHRKKLKNSKTLSPEQRQELQQQLADLERKEINILKDKV 617
            I +  + D + +  +       ++  +N      E+    QQ++A+     IN   D++
Sbjct: 299 DIGSFDEEDTKGIKLLDS----DQELYRNFPLTISER---WQQEVAETVFDTINAETDRL 351

Query: 618 SNKMHA 623
             +   
Sbjct: 352 EARKKT 357


>d1f7ua3 d.67.2.1 (A:2-135) Arginyl-tRNA synthetase (ArgRS),
           N-terminal 'additional' domain {Baker's yeast
           (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 134

 Score = 26.7 bits (59), Expect = 8.4
 Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 12/79 (15%)

Query: 750 TKLVSKGDRAAIGGLLGPVPSMVTNLTSS---AVELATKDNENSKVNATKAIRKTLPFMN 806
           T  + +GD         P+P +     +    AV+ A K      +   +A     PF+ 
Sbjct: 60  TNTMERGDLLI------PIPRLRIKGANPKDLAVQWAEKFPCGDFLEKVEANG---PFIQ 110

Query: 807 MWYLKNSFDHLILNQILEE 825
            ++       L++  IL  
Sbjct: 111 FFFNPQFLAKLVIPDILTR 129


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.132    0.372 

Gapped
Lambda     K      H
   0.267   0.0626    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,070,941
Number of extensions: 145017
Number of successful extensions: 496
Number of sequences better than 10.0: 1
Number of HSP's gapped: 494
Number of HSP's successfully gapped: 19
Length of query: 864
Length of database: 2,407,596
Length adjustment: 93
Effective length of query: 771
Effective length of database: 1,130,706
Effective search space: 871774326
Effective search space used: 871774326
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.0 bits)