BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781203|ref|YP_003065616.1| hypothetical protein
CLIBASIA_05550 [Candidatus Liberibacter asiaticus str. psy62]
(478 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254781203|ref|YP_003065616.1| hypothetical protein CLIBASIA_05550 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040880|gb|ACT57676.1| hypothetical protein CLIBASIA_05550 [Candidatus Liberibacter
asiaticus str. psy62]
gi|317120669|gb|ADV02492.1| hypothetical protein SC1_gp035 [Liberibacter phage SC1]
gi|317120813|gb|ADV02634.1| hypothetical protein SC1_gp035 [Candidatus Liberibacter asiaticus]
Length = 478
Score = 811 bits (2094), Expect = 0.0, Method: Composition-based stats.
Identities = 478/478 (100%), Positives = 478/478 (100%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQ 60
MYFNAVSDEDIRDNIKEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQ
Sbjct: 1 MYFNAVSDEDIRDNIKEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQ 60
Query: 61 PNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAP 120
PNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAP
Sbjct: 61 PNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAP 120
Query: 121 LAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTV 180
LAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTV
Sbjct: 121 LAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTV 180
Query: 181 ASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQV 240
ASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQV
Sbjct: 181 ASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQV 240
Query: 241 QNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPH 300
QNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPH
Sbjct: 241 QNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPH 300
Query: 301 FDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVEREL 360
FDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVEREL
Sbjct: 301 FDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVEREL 360
Query: 361 SEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDPMRGADFTDAPHAKFDATTFTESLP 420
SEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDPMRGADFTDAPHAKFDATTFTESLP
Sbjct: 361 SEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDPMRGADFTDAPHAKFDATTFTESLP 420
Query: 421 HVDEQTMHRFSELKERHPVEAREVLEGLQEKLQGTKEIKTKSLIKEAINCFLRTGGSL 478
HVDEQTMHRFSELKERHPVEAREVLEGLQEKLQGTKEIKTKSLIKEAINCFLRTGGSL
Sbjct: 421 HVDEQTMHRFSELKERHPVEAREVLEGLQEKLQGTKEIKTKSLIKEAINCFLRTGGSL 478
>gi|268589386|ref|ZP_06123607.1| conserved hypothetical protein [Providencia rettgeri DSM 1131]
gi|291315413|gb|EFE55866.1| conserved hypothetical protein [Providencia rettgeri DSM 1131]
Length = 594
Score = 299 bits (765), Expect = 8e-79, Method: Composition-based stats.
Identities = 74/345 (21%), Positives = 135/345 (39%), Gaps = 57/345 (16%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRPRVSPDIKW--------HTGLGKEVINMPARSL----DK 48
M + ++ I + + Q P S D + +TGL +I P + L D
Sbjct: 1 MSYFGLNPTRINQQLDDAMQSPENSGDADFFDGAFTSTYTGLYSGLIAKPEQVLWGIADT 60
Query: 49 LVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPL 108
+V+P E ++Q + S A + + SL P A AG+++ L
Sbjct: 61 VVSPIAREVNEQFDINDTSEQFIQEQRKNAE--KQVRSLTPDRATTGTAGQVM----FSL 114
Query: 109 TRLAGLALQS----APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSA 164
+ G AL PL L + ++ + +GVDK TA A E +
Sbjct: 115 FDIGGEALTGAMIGGPLGGAMLVGGVQGFSDYE-KLRADGVDKNTAINKATGEGLFAGLG 173
Query: 165 LLAP-------GAIASQSI---------------------AKTVASGAVLNVPFGMVERG 196
+L P G I ++SI + + N+ GM +RG
Sbjct: 174 VLTPMTLGFKGGGILAESIGAQFTARGGTLSSLAGTAARATPDIVYASGSNIAMGMAQRG 233
Query: 197 WSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHS---KQVQNMSLRLVN--DL 251
++S++L++ GY +A Y ++D +++ DG++G FGGM + +N+ L + +
Sbjct: 234 FASQILKERGYNQLASQYDVYDKQAIAIDGVLGVAFGGMGRYINSRGENVPLPEFDTPHV 293
Query: 252 KEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRG 296
+T H PG+ + + + H + ++ L +G
Sbjct: 294 DAALTANQQL-HLEADLPPGIPINAMSLDGHLAAMNKAMNDLSQG 337
>gi|309702800|emb|CBJ02131.1| hypothetical phage protein [Escherichia coli ETEC H10407]
Length = 600
Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats.
Identities = 69/349 (19%), Positives = 124/349 (35%), Gaps = 63/349 (18%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRP----------RVSPDIKWHTGLGKEVINMPARSL---- 46
M + ++ + + E A P S +GL ++ P + L
Sbjct: 1 MSYFGLNAVNQNQQLDEAASNPAGFNTDVGFFDNSGTAA-VSGLYSGLVAKPDQLLWAGM 59
Query: 47 DKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPT 106
DK+V+P + ++ + S A + + L P A AG++L
Sbjct: 60 DKIVSPIAKFVNENTSINDTSAEYIAEQRKLAE--QQVKRLTPDAATTGTAGQVLHG--- 114
Query: 107 PLTRLAGLALQS----APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHT 162
L + G A+ P A L +E +GVD TA + +
Sbjct: 115 -LFDMGGQAVVGTLLSGPAGGAAAVTALQGFSEFE-RLTAQGVDFRTAQEAGLVQGVTAG 172
Query: 163 SALLAP-------GAIASQSI----------------------AKTVASGAVLNVPFGMV 193
+ L P G ++S+ A +A A N+ FGM
Sbjct: 173 AGTLIPMSLGLRAGGALAESVGAQLARTGESAVRNVAATAVRAAPDIAYAAGTNIAFGMA 232
Query: 194 ERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHS------KQVQNMSLRL 247
+RG ++K L D GY +MA Y +FD +S+ D ++G FGG+ +
Sbjct: 233 QRGLTAKTLRDGGYNEMANQYDVFDRQSIAIDAVLGVAFGGVGRFLNARGESAAAPEFSP 292
Query: 248 VNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRG 296
++ + + H +PG+ + + +AH L ++ + +G
Sbjct: 293 A-EVDAALAANASH-HAEIDVAPGVPVNVLSRDAHIQALQKAMNDVSQG 339
>gi|298381706|ref|ZP_06991305.1| conserved hypothetical protein [Escherichia coli FVEC1302]
gi|298279148|gb|EFI20662.1| conserved hypothetical protein [Escherichia coli FVEC1302]
Length = 600
Score = 252 bits (644), Expect = 8e-65, Method: Composition-based stats.
Identities = 66/348 (18%), Positives = 126/348 (36%), Gaps = 61/348 (17%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPARSL----D 47
M + ++ + + E A P + D+ + +GL ++ P + L D
Sbjct: 1 MSYFGLNPVNQNQQLDEAASNPAGFNSDVGFFDNAVGSALSGLYSGLVAKPDQLLWAGMD 60
Query: 48 KLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTP 107
K+V+P + ++ + S + A + + L P A AG++L
Sbjct: 61 KIVSPIAQFVNENTSLNDTSVSYIAEQRKLAE--QQVKRLTPDAATTGTAGQVL----YG 114
Query: 108 LTRLAGLALQS----APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTS 163
L + G A+ P+ A L +E +GVD TA + I +
Sbjct: 115 LFDMGGQAVVGTTLGGPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGA 173
Query: 164 ALLAP-------GAIASQSIA----------------------KTVASGAVLNVPFGMVE 194
L P G ++ +A +A A N+ FGM +
Sbjct: 174 GTLIPMSLGLRAGGALAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQ 233
Query: 195 RGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHS------KQVQNMSLRLV 248
RG ++K L D GY +MA Y + D +++ D ++G FGG+ + + V
Sbjct: 234 RGLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGESTSAPNFSPV 293
Query: 249 NDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRG 296
+ + + + +PG+ + + +H L + + +G
Sbjct: 294 D-VDAALAANAAHH-AEIDIAPGVPINVLSRNSHIQALRKAMSDVSQG 339
>gi|332344342|gb|AEE57676.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 600
Score = 252 bits (644), Expect = 9e-65, Method: Composition-based stats.
Identities = 66/348 (18%), Positives = 125/348 (35%), Gaps = 61/348 (17%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPARSL----D 47
M + ++ + + E A P + D+ + +GL ++ P + L D
Sbjct: 1 MSYFGLNPVNQNQQLDEAASNPAGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMD 60
Query: 48 KLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTP 107
K+V+P + ++ + S + A + + L P A AG++L
Sbjct: 61 KIVSPIAQFVNENTSLNDTSVSYIAEQRKLAE--QQVKRLTPDAATTGTAGQVL----YG 114
Query: 108 LTRLAGLALQS----APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTS 163
L + G A+ P+ A L +E +GVD TA + I +
Sbjct: 115 LFDMGGQAVVGTTLGGPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGA 173
Query: 164 ALLAP-------GAIASQSIA----------------------KTVASGAVLNVPFGMVE 194
L P G ++ +A +A A N+ FGM +
Sbjct: 174 GTLIPMSLGLRAGGALAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQ 233
Query: 195 RGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHS------KQVQNMSLRLV 248
RG ++K L D GY +MA Y + D +++ D ++G FGG+ + + V
Sbjct: 234 RGLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGESTSAPNFSPV 293
Query: 249 NDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRG 296
+ + + + +PG+ + + +H L + + G
Sbjct: 294 D-VDAALAANAAHH-AEIDIAPGVPINVLSRNSHIQALRKAMSDVSEG 339
>gi|218700978|ref|YP_002408607.1| hypothetical protein ECIAI39_2668 [Escherichia coli IAI39]
gi|218370964|emb|CAR18791.1| conserved hypothetical protein from phage origin [Escherichia coli
IAI39]
Length = 600
Score = 252 bits (643), Expect = 1e-64, Method: Composition-based stats.
Identities = 67/348 (19%), Positives = 125/348 (35%), Gaps = 61/348 (17%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPARSL----D 47
M + ++ + + E A P + D+ + +GL ++ P + L D
Sbjct: 1 MSYFGLNPVNQNQQLDEAASNPAGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMD 60
Query: 48 KLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTP 107
K+V+P + ++ + S + A + + L P A AG++L
Sbjct: 61 KIVSPIAQFVNENTSINDTSVSYIAEQRKLAE--QQVKRLTPDAATTGTAGQVL----YG 114
Query: 108 LTRLAGLALQS----APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTS 163
L + G A+ P+ A L +E +GVD TA + I +
Sbjct: 115 LFDMGGQAVVGTTLGGPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGA 173
Query: 164 ALLAP-------GAIASQSIA----------------------KTVASGAVLNVPFGMVE 194
L P G ++ +A +A A N+ FGM +
Sbjct: 174 GTLIPMSLGLRAGGALAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQ 233
Query: 195 RGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHS------KQVQNMSLRLV 248
RG ++K L D GY +MA Y + D +++ D ++G FGG+ + + V
Sbjct: 234 RGLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGESTSAPNFSPV 293
Query: 249 NDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRG 296
+ + H +PG+ + + +H L + + +G
Sbjct: 294 D--IDAALAANAAHHAEIDIAPGVPINVLSRNSHIQALRKAMSDVSQG 339
>gi|300898439|ref|ZP_07116780.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300357906|gb|EFJ73776.1| conserved hypothetical protein [Escherichia coli MS 198-1]
Length = 600
Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats.
Identities = 66/348 (18%), Positives = 126/348 (36%), Gaps = 61/348 (17%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPARSL----D 47
M + ++ + + E A P + D+ + +GL ++ P + L D
Sbjct: 1 MSYFGLNPVNQNQQLDEAASNPAGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMD 60
Query: 48 KLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTP 107
K+V+P + ++ + S + A + + L P A AG++L
Sbjct: 61 KIVSPIAQFVNENTSLNDTSVSYIAEQRKLAE--QQVKRLTPDAATTGTAGQVL----YG 114
Query: 108 LTRLAGLALQS----APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTS 163
L + G A+ P+ A L +E +GVD TA + I +
Sbjct: 115 LFDMGGQAVVGTTLGGPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGA 173
Query: 164 ALLAP-------GAIASQSIA----------------------KTVASGAVLNVPFGMVE 194
L P G ++ +A +A A N+ FGM +
Sbjct: 174 GTLIPISLGLRAGGALAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQ 233
Query: 195 RGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHS------KQVQNMSLRLV 248
RG ++K L D GY +MA Y + D +++ D ++G FGG+ + + V
Sbjct: 234 RGLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGESTSAPNFSPV 293
Query: 249 NDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRG 296
+ + + + +PG+ + + +H L + + +G
Sbjct: 294 D-VDAALAANAAHH-AEIDIAPGVPINVLSRNSHIQALRKAMSDVSQG 339
>gi|323948673|gb|EGB44578.1| hypothetical protein ERKG_04896 [Escherichia coli H252]
Length = 600
Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats.
Identities = 67/348 (19%), Positives = 125/348 (35%), Gaps = 61/348 (17%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPARSL----D 47
M + ++ + + E A P + D+ + +GL ++ P + L D
Sbjct: 1 MSYFGLNPVNQNQQLDEAASNPAGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMD 60
Query: 48 KLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTP 107
K+V+P + ++ + S + A + + L P A AG++L
Sbjct: 61 KIVSPIAQFVNENTSINDTSVSYIAEQRKLAE--QQVKRLTPDAATTGTAGQVL----YG 114
Query: 108 LTRLAGLALQS----APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTS 163
L + G A+ P+ A L +E +GVD TA + I +
Sbjct: 115 LFDMGGQAVVGTTLGGPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGA 173
Query: 164 ALLAP-------GAIASQSIA----------------------KTVASGAVLNVPFGMVE 194
L P G ++ +A +A A N+ FGM +
Sbjct: 174 GTLIPMSLGLRAGGALAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQ 233
Query: 195 RGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHS------KQVQNMSLRLV 248
RG ++K L D GY +MA Y + D +++ D ++G FGG+ + + V
Sbjct: 234 RGLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGESTSAPNFSPV 293
Query: 249 NDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRG 296
+ + H +PG+ + + +H L + + +G
Sbjct: 294 D--IDAALAANAAHHAEIDIAPGVPINVLSRNSHIQALRKAMSDVSQG 339
>gi|324008548|gb|EGB77767.1| hypothetical protein HMPREF9532_01735 [Escherichia coli MS 57-2]
Length = 600
Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats.
Identities = 67/348 (19%), Positives = 125/348 (35%), Gaps = 61/348 (17%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPARSL----D 47
M + ++ + + E A P + D+ + +GL ++ P + L D
Sbjct: 1 MSYFGLNPVNQNQQLDEAASNPAGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMD 60
Query: 48 KLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTP 107
K+V+P + ++ + S + A + + L P A AG++L
Sbjct: 61 KIVSPIAQFVNENTSINDTSVSYIAEQRKLAE--QQVKRLTPDAATTGTAGQVL----YG 114
Query: 108 LTRLAGLALQS----APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTS 163
L + G A+ P+ A L +E +GVD TA + I +
Sbjct: 115 LFDMGGQAVVGTTLGGPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGA 173
Query: 164 ALLAP-------GAIASQSIA----------------------KTVASGAVLNVPFGMVE 194
L P G ++ +A +A A N+ FGM +
Sbjct: 174 GTLIPMSLGLRAGGALAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQ 233
Query: 195 RGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHS------KQVQNMSLRLV 248
RG ++K L D GY +MA Y + D +++ D ++G FGG+ + + V
Sbjct: 234 RGLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGESTSAPNFSPV 293
Query: 249 NDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRG 296
+ + H +PG+ + + +H L + + +G
Sbjct: 294 D--IDAALAANAAHHAEIDIAPGVPINVLSRNSHIQALRKAMSDVSQG 339
>gi|117624700|ref|YP_853613.1| hypothetical protein APECO1_4053 [Escherichia coli APEC O1]
gi|115513824|gb|ABJ01899.1| conserved hypothetical protein [Escherichia coli APEC O1]
Length = 600
Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats.
Identities = 66/348 (18%), Positives = 125/348 (35%), Gaps = 61/348 (17%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPARSL----D 47
M + ++ + + E A P + D+ + +GL ++ P + L D
Sbjct: 1 MSYFGLNPVNQNQQLDEAASNPAGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMD 60
Query: 48 KLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTP 107
K+V+P + ++ + S + A + + L P A AG++L
Sbjct: 61 KIVSPIAQFVNENTSINDTSVSYIAEQRKLAE--QQVKRLTPDAATTGTAGQVL----YG 114
Query: 108 LTRLAGLALQS----APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTS 163
+ + G A+ P+ A L +E +GVD TA + I +
Sbjct: 115 VFDMGGQAVVGTTLGGPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGA 173
Query: 164 ALLAP-------GAIASQSIA----------------------KTVASGAVLNVPFGMVE 194
L P G ++ +A +A A N+ FGM +
Sbjct: 174 GALIPMSLWLRAGGALAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQ 233
Query: 195 RGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHS------KQVQNMSLRLV 248
RG ++K L D GY +MA Y + D +++ D ++G FGG+ + + V
Sbjct: 234 RGLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGESTSAPNFSPV 293
Query: 249 NDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRG 296
+ + H +PG+ + + +H L + + +G
Sbjct: 294 D--IDAALAANAAHHAEIDIAPGVPINVLSRNSHIQALRKAMSDVSQG 339
>gi|323156121|gb|EFZ42280.1| hypothetical protein ECEPECA14_1896 [Escherichia coli EPECa14]
Length = 600
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 67/348 (19%), Positives = 126/348 (36%), Gaps = 61/348 (17%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRP-RVSPDIKWH--------TGLGKEVINMPARSL----D 47
M + ++ + + E A P + D+ + +GL ++ P + L D
Sbjct: 1 MSYFGLNPVNQNQQLDEAASNPVGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMD 60
Query: 48 KLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTP 107
K+V+P + ++ + S + A + + L P A AG++L
Sbjct: 61 KIVSPIAQFVNENTSLNDTSVSYIAEQRKLAE--QQVKRLTPDAATTGTAGQVL----YG 114
Query: 108 LTRLAGLALQS----APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTS 163
L + G A+ P+ A L +E +GVD TA + I +
Sbjct: 115 LFDMGGQAVIGTTLGGPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGA 173
Query: 164 ALLAP-------GAIASQSIA----------------------KTVASGAVLNVPFGMVE 194
L P G ++ +A +A A N+ FGM +
Sbjct: 174 GTLIPMSLGLRAGGALAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQ 233
Query: 195 RGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHS------KQVQNMSLRLV 248
RG ++K L D GY +MA Y + D +++ D ++G FGG+ + + V
Sbjct: 234 RGLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGEATSTPNFSPV 293
Query: 249 NDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRG 296
+ + + + SPG+ + + +H L + + +G
Sbjct: 294 D-VDAALAANAAHH-AEIDISPGVPINVLSRNSHIQALRKAMSDVSQG 339
>gi|89152440|ref|YP_512273.1| hypothetical protein PhiV10p19 [Escherichia phage phiV10]
gi|74055463|gb|AAZ95912.1| hypothetical protein PhiV10p19 [Escherichia phage phiV10]
Length = 600
Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats.
Identities = 66/348 (18%), Positives = 128/348 (36%), Gaps = 61/348 (17%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPARSL----D 47
M + ++ + + E A P + D+ + +GL ++ P + L D
Sbjct: 1 MSYFGLNPVNQNQQLDEAALNPVGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMD 60
Query: 48 KLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTP 107
K+V+P + ++ + S + A + + L P A +AG++L
Sbjct: 61 KIVSPIAQLVNENTSLNDTSVSYIAEQRKLAE--QQVKRLTPDAATTGIAGQVL----YG 114
Query: 108 LTRLAGLALQS----APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTS 163
L + G A+ P+ A L +E +GVD TA + I +
Sbjct: 115 LFDMGGQAVVGTTLGGPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGA 173
Query: 164 ALLAP-------GAIASQSIA----------------------KTVASGAVLNVPFGMVE 194
L P G ++ +A +A A N+ FGM +
Sbjct: 174 GTLIPMSLGLRAGGALAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQ 233
Query: 195 RGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHS------KQVQNMSLRLV 248
RG ++K L D GY +MA Y + D +++ D ++G FGG+ + + V
Sbjct: 234 RGLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGESTSAPNFSPV 293
Query: 249 NDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRG 296
+ + + + +PG+ ++ + +H L + + +G
Sbjct: 294 D-VDAALAANAAHH-AEIDIAPGVPSNVLSRNSHIQALRKAMSDVSQG 339
>gi|215487809|ref|YP_002330240.1| hypothetical protein E2348C_2742 [Escherichia coli O127:H6 str.
E2348/69]
gi|215265881|emb|CAS10290.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
Length = 600
Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats.
Identities = 70/349 (20%), Positives = 126/349 (36%), Gaps = 63/349 (18%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRP----------RVSPDIKWHTGLGKEVINMPARSL---- 46
M + ++ + + E A P S +GL ++ P + L
Sbjct: 1 MSYFGLNAVNQNQQLDEAASNPAGFNTDVGFFDNSGTAA-VSGLYSGLVAKPDQLLWAGM 59
Query: 47 DKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPT 106
DK+V+P + ++ + S A + + L P A AG++L+
Sbjct: 60 DKIVSPIAKFVNENTSINDTSAEYIGEQRKLAE--QQVKRLTPDAATTGTAGQVLNG--- 114
Query: 107 PLTRLAGLALQSAPLAAGALYAYL----SHKAESSIHHQIEGVDKETADALAWREAIVHT 162
L + G A+ LA A A +E +GVD TA + +
Sbjct: 115 -LFDMGGQAVVGTLLAGPAGGAAAVTALQGFSEFE-KLTAQGVDFRTAQEAGLVQGVTAG 172
Query: 163 SALLAP-------GAIASQSI----------------------AKTVASGAVLNVPFGMV 193
+ L P G ++S+ A +A A N+ FGM
Sbjct: 173 AGTLIPMSLGLRAGGALAESVGAQLARTGESAVRNVAATAVRAAPDIAYAAGTNIAFGMA 232
Query: 194 ERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHS------KQVQNMSLRL 247
+RG ++K L D GY +MA Y +FD +S+ D ++G FGG+ +
Sbjct: 233 QRGLTAKTLRDGGYNEMAAQYDVFDRQSIAIDAVLGVAFGGVGRFLNARGESAATPEFSP 292
Query: 248 VNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRG 296
++ + + H +PG+ + + +AH L ++ + +G
Sbjct: 293 A-EVDAALAANASH-HAEIDVAPGVPVNVLSRDAHIQALQKAMNDVSQG 339
>gi|331648164|ref|ZP_08349254.1| hypothetical protein ECIG_04090 [Escherichia coli M605]
gi|331043024|gb|EGI15164.1| hypothetical protein ECIG_04090 [Escherichia coli M605]
Length = 600
Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats.
Identities = 66/346 (19%), Positives = 125/346 (36%), Gaps = 57/346 (16%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPARSL----D 47
M + ++ + + E A P + D+ + +GL ++ P + L D
Sbjct: 1 MSYFGLNPVNQNQQLDEAASNPAGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMD 60
Query: 48 KLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTP 107
K+V+P + ++ + S + A + + L P A AG++L
Sbjct: 61 KIVSPIAQFVNENTSLNDTSVSYIAEQRKLAE--QQVKRLTPDAATTGSAGQVL----YG 114
Query: 108 LTRLAGLALQS----APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTS 163
L + G A+ P+ A L +E +GVD TA + I +
Sbjct: 115 LFDMGGQAVVGTTLGGPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGA 173
Query: 164 ALLAP-------GAIASQSIA----------------------KTVASGAVLNVPFGMVE 194
L P G ++ +A +A A N+ FGM +
Sbjct: 174 GTLIPMSLGLRAGGALAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQ 233
Query: 195 RGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHS---KQVQNMSLRLVNDL 251
R ++K L D GY +MA Y + D +++ D ++G FGG+ + + S + +
Sbjct: 234 RVLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGEPTSAPNFSPV 293
Query: 252 K-EGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRG 296
+ H +PG+ + + +H L + + +G
Sbjct: 294 DIDAALAANAAHHAEIDIAPGVPINVLSRNSHIQALRKAMSDVSQG 339
>gi|327252172|gb|EGE63844.1| hypothetical protein ECSTEC7V_3019 [Escherichia coli STEC_7v]
Length = 600
Score = 239 bits (610), Expect = 7e-61, Method: Composition-based stats.
Identities = 66/348 (18%), Positives = 124/348 (35%), Gaps = 61/348 (17%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPARSL----D 47
M + ++ + + E A P + D+ + +GL ++ P + L D
Sbjct: 1 MSYFGLNPVNQNQQLDEAASNPAGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMD 60
Query: 48 KLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTP 107
K+V+P + ++ + S + A + + L P A AG++L
Sbjct: 61 KIVSPIAQFVNENTSLNDTSVSYIAEQRKLAE--QQVKRLTPDAATTGTAGQVL----YG 114
Query: 108 LTRLAGLALQSAPLAAGAL----YAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTS 163
L + G A+ L A L +E +GVD TA + I +
Sbjct: 115 LFDMGGQAVIGTTLGGPAGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGA 173
Query: 164 ALLAP-------GAIASQSIA----------------------KTVASGAVLNVPFGMVE 194
+ P G ++ +A +A A N+ FGM +
Sbjct: 174 GTMIPMSLGLRAGGALAEGVAAQLARTGESSVRRAAATAVSATPDIAYAAGTNIAFGMAQ 233
Query: 195 RGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHS------KQVQNMSLRLV 248
RG ++K L D GY +MA Y + D +++ D ++G FGG+ + + V
Sbjct: 234 RGLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVAFGGVGRFINSRGESTSAPNFSPV 293
Query: 249 NDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRG 296
+ + H +PG+ + + +H L + + +G
Sbjct: 294 D--IDAALAANAAHHAEIDIAPGVPINVLSRNSHIQALRKAMSDVSQG 339
>gi|85059172|ref|YP_454874.1| hypothetical protein SG1194 [Sodalis glossinidius str. 'morsitans']
gi|84779692|dbj|BAE74469.1| hypothetical phage protein [Sodalis glossinidius str. 'morsitans']
Length = 490
Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats.
Identities = 63/344 (18%), Positives = 121/344 (35%), Gaps = 51/344 (14%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRPRVSP---DIKWHTGLGKEVI-------NMPARS----L 46
M + S + ++ P + D + G G + + L
Sbjct: 1 MSYFGFSPTQQNKALAYASEHPIGTGTLQDAAFFDGAGTALFEGLWSGVRQADQVGWAAL 60
Query: 47 DKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPT 106
D +++P E + S A + + L P AG++L +
Sbjct: 61 DTVMSPVAEAVSETFGVRDSSADFFKEQRKLAE--KSVRELTPDPGTTGTAGQVLYSLGQ 118
Query: 107 PLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALL 166
+ +L P A A L ++ + +GVD TA A ++
Sbjct: 119 LGGQAIAGSLMGGPWGAAATVGTLQGFSDYE-KSRADGVDYGTAVDKALVTGGTAALGVV 177
Query: 167 AP-------GAIASQSIAKTVASG---------------------AVLNVPFGMVERGWS 198
P G ++ ++ ++ G A N+ GM +RG S
Sbjct: 178 LPMSLGLRAGGAVAEGVSAALSVGRGASGALAGAVARAAPDLFYSAGTNIAMGMAQRGLS 237
Query: 199 SKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHS---KQVQNMSLRLV--NDLKE 253
++ L GY DMA+ Y + D ++L TD ++G FGG+ + +++ +R V ++
Sbjct: 238 AETLRRGGYEDMARQYDVMDAQALATDAVLGVAFGGLGRFINSRGEDVPVRRVSPEEIDA 297
Query: 254 GITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGE 297
+T + +PG+ S + AH + + ++ GE
Sbjct: 298 ALTSSSHVNF-EVTVAPGVPVSVLSRNAHAQAMNKAMTDVLAGE 340
>gi|320175033|gb|EFW50146.1| 16 [Shigella dysenteriae CDC 74-1112]
Length = 600
Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats.
Identities = 65/348 (18%), Positives = 122/348 (35%), Gaps = 61/348 (17%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRPRV-SPDIKWH--------TGLGKEVINMPARSL----D 47
M + ++ + + E A P + D+ + +GL ++ P + L D
Sbjct: 1 MSYFGLNPVNQNQQLDEAASNPAGFNSDVGFFDNAVGAALSGLYSGLVAKPDQLLWAGMD 60
Query: 48 KLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTP 107
K+V+P + ++ + S + A + + L P A AG++L
Sbjct: 61 KIVSPIAQFVNENTSLNDTSVSYIAEQRKLAE--QQVKRLTPDAATTGTAGQVL----YG 114
Query: 108 LTRLAGLALQS----APLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTS 163
L + G A+ P+ A L +E +GVD TA + I +
Sbjct: 115 LFDMGGQAVVGTTLGGPVGGAAAVTSLQGFSEFE-RLTAQGVDFRTAQEAGLVQGITAGA 173
Query: 164 ALLAP-------GAIASQSIA----------------------KTVASGAVLNVPFGMVE 194
L P G ++ +A +A A N+ FGM +
Sbjct: 174 GTLIPMSLGLRAGGALAEGVAAQLARTGESSVRRAAATAVRATPDIAYAAGTNIAFGMAQ 233
Query: 195 RGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAF------FGGMHSKQVQNMSLRLV 248
RG ++K L D GY +MA Y + D +++ D ++G F + + V
Sbjct: 234 RGLTAKTLRDGGYSEMANQYDVLDRQAIAIDAVLGVVFGGVGRFINSRGEPTSAPNFSPV 293
Query: 249 NDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRG 296
+ + H +PG+ + + +H L + + +G
Sbjct: 294 D--IDAALAANAAHHAEIDIAPGVPINVLSRNSHIQALRKAMSDVSQG 339
>gi|304398391|ref|ZP_07380265.1| hypothetical protein PanABDRAFT_3526 [Pantoea sp. aB]
gi|304354257|gb|EFM18630.1| hypothetical protein PanABDRAFT_3526 [Pantoea sp. aB]
Length = 625
Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats.
Identities = 72/319 (22%), Positives = 127/319 (39%), Gaps = 37/319 (11%)
Query: 16 KEWAQRPRVSPD---IKWHTGLGKEVINMPAR----------SLDKLVAPFREETHDQPN 62
+ A + PD +W+ G G + A KL + D P
Sbjct: 16 DDQAASKQAQPDDYDPRWYAGSGSALFRGAAEGTIGLGQTLVETAKLSPTYSALRGDLPE 75
Query: 63 YYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLA 122
+ +V L + S+ P +A ++L + T + P+A
Sbjct: 76 LDEIVDQNFSAVQKS--LNDARNSVKPAPNSQGMAAEILEGLGT-FAPAIAATAVAGPVA 132
Query: 123 AGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVAS 182
GA+ S+++ +GV+++TA LA +A + + P + + +A + S
Sbjct: 133 GGAVAFGSSYESTRQDFL-AKGVNEDTAGTLALEQAGANALGMALPAGVGGR-LATRLLS 190
Query: 183 GAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQN 242
G +N FG V R + LE++GY ++A+ YR++D ++L+ DG++GA FGG+H
Sbjct: 191 GVGINTGFGAVNRFALGETLEENGYDELAKQYRVWDKQALLVDGVLGAAFGGVHHLTSPR 250
Query: 243 MSLRLVN------------DLKEGI-TERLPYKHGVKSSSP---GLH-TSFDAYEAHTDT 285
L + D + + P + V SP G ++D+ A
Sbjct: 251 ADTPLADPAPVSAGESAVTDAPAALRADADPAQTVVAEDSPLPAGEPAVTYDSRIAEMQD 310
Query: 286 LAHGVDSLVRGEYPHFDQE 304
LA V + RG+ QE
Sbjct: 311 LAGQV--ISRGDRKALAQE 327
>gi|85059663|ref|YP_455365.1| hypothetical protein SG1685 [Sodalis glossinidius str. 'morsitans']
gi|84780183|dbj|BAE74960.1| hypothetical protein [Sodalis glossinidius str. 'morsitans']
Length = 490
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 61/344 (17%), Positives = 119/344 (34%), Gaps = 51/344 (14%)
Query: 1 MYFNAVSDEDIRDNIKEWAQRPRVSP---DIKWHTGLGKEVINM-------PARS----L 46
M + + S + A+ P + D + G G + + L
Sbjct: 1 MSYFSFSPTQQNKALAYAAEHPIGTGTLQDAAFFDGAGTALFKGLWSGVRQADQVGWAAL 60
Query: 47 DKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPT 106
D ++P + + S + A + L P + AG++L +
Sbjct: 61 DTAISPVADAVSETFGVRDFSADFFKAQRKLAET--RVRELTPDLGTTGTAGQVLFSLGQ 118
Query: 107 PLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALL 166
+ +L P +A A L + + +GVD TA A +
Sbjct: 119 LGGQAIAGSLMGGPWSAAATVGTLQGFSYYE-KSRADGVDYGTAVDKALVTGGTAALGAV 177
Query: 167 AP-------GAIASQSIAKTVASG---------------------AVLNVPFGMVERGWS 198
P G ++ ++ ++ G A N+ GM +RG S
Sbjct: 178 LPMSLGLRAGGAVAEGVSAALSVGRGASGALAGAVARAAPDLFYSAGTNIAMGMAQRGLS 237
Query: 199 SKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHS---KQVQNMSLRLV--NDLKE 253
++ L GY DMA+ Y + ++L TD ++G GG+ + +++ +R V ++
Sbjct: 238 AETLRRGGYEDMARQYDVMASQALATDAVLGLAPGGLGRFINSRGEDVPVRRVSPEEIDA 297
Query: 254 GITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGE 297
+T + +PG+ S + AH + + ++ GE
Sbjct: 298 ALTSSSHVNF-EVTVAPGVPVSVLSCNAHAQAMNKAMAGVLAGE 340
>gi|298485994|ref|ZP_07004068.1| predicted phage protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298159471|gb|EFI00518.1| predicted phage protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 448
Score = 206 bits (523), Expect = 8e-51, Method: Composition-based stats.
Identities = 60/281 (21%), Positives = 110/281 (39%), Gaps = 19/281 (6%)
Query: 31 HTGLGKEVINMPARSLDKLVAPFREET------HDQPNYYRGSRTDPHSVGTGAHLVEGL 84
+ LGK ++ + + + +Y + + S + L
Sbjct: 36 YDSLGKGLVRGAIEGGAAAESTYWNAILSGGPEQNIFDYTQSTTLSRESQQKIGDDLNTL 95
Query: 85 TS--------LAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAES 136
L P A +AG+++ L R A+ + P A + +
Sbjct: 96 REETASAVMDLRPDPAEVGIAGQIIGEAAAILPRAVIGAVAAGPAGAAIAAGAPAGYSRR 155
Query: 137 SIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERG 196
++ EG+D+ TA L E +V + + P A + + A NV GM RG
Sbjct: 156 AVSM-AEGIDENTATLLGLSEGVVTGAGAILPAAQFVKPVLGDAAIAIGANVGLGMAHRG 214
Query: 197 WSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGIT 256
++ +L+ +GY A YR D ++ TD ++GA F G+ ++ + + + +T
Sbjct: 215 TAAALLDSNGYAAQAAQYRAMDGTAIATDAILGAAFFGIGRSSMRRPT---TDQVDAALT 271
Query: 257 ERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGE 297
ER +H ++PGL + AH D L ++ + RGE
Sbjct: 272 ER-NAQHADIDTAPGLPVDPRSAIAHQDALRAAIEQINRGE 311
>gi|332160978|ref|YP_004297555.1| hypothetical protein YE105_C1356 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665208|gb|ADZ41852.1| Hypothetical phage protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862134|emb|CBX72298.1| hypothetical protein YEW_AK02350 [Yersinia enterocolitica W22703]
Length = 430
Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats.
Identities = 77/340 (22%), Positives = 139/340 (40%), Gaps = 32/340 (9%)
Query: 33 GLGKEVINMPARSLDKLVAPFREETHDQPNYYRGS---RTDPHSVGTGAHLVEGLTSLAP 89
GL K ++ + L++P + + + A + AP
Sbjct: 50 GLNKVAFA-ASQGVSTLLSPVAQAIDRATGTNANAFFDGSWTEGFRKTAEIQ------AP 102
Query: 90 YIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKET 149
AG++L+ + ++R G + + PL L + + +G+D T
Sbjct: 103 EATVTTTAGQILNGLGDVMSRAVGGTVAAGPLGGAVLAGGTEAIFANDEGLR-KGLDPLT 161
Query: 150 ADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPD 209
A + + + L P A ++++ VA+GA N+ G V+RG +++ LE GY D
Sbjct: 162 AAGKGVLDGVSLGAGTLVPAAPFAKTLLSRVAAGAASNIAIGAVQRGTTAEWLEQRGYKD 221
Query: 210 MAQHYRIFDMESLITDGLIGAFFGGM-HSKQVQNMSLRLVNDLKEGITERLPYKHGVKSS 268
MAQ Y+++D +++ DG++GA FGG+ H + + +T R +H + +
Sbjct: 222 MAQQYKVWDATAMLADGVLGAAFGGLAHIGAAATP-----DSVDAALTAR-NAQHFREDT 275
Query: 269 SPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPH-------FDQEKLQTIADNTLEDPHFKP 321
+PG+ T + AH L D + RGE FD + N E P
Sbjct: 276 APGIPTDIPSNIAHQRALETATDQINRGEPVDVANIDGVFDAHFIARDGSNFAEQP---- 331
Query: 322 HLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELS 361
E P P + + Q P + AE P+ + R+++
Sbjct: 332 --AEIAPRPVAESEATFQ-PEKTTAETATPEADPILRDIN 368
>gi|301028421|ref|ZP_07191667.1| conserved domain protein [Escherichia coli MS 196-1]
gi|299878532|gb|EFI86743.1| conserved domain protein [Escherichia coli MS 196-1]
Length = 686
Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats.
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 6/210 (2%)
Query: 33 GLGKEVINMPARSLDKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIA 92
G K +I+ PA + P+ + ++G L + + + P
Sbjct: 58 GFSKRLISDPA-FTADVAPTVNIFREMFPDADKTLNDTYDTIGK--QLQDARSYVKPDAG 114
Query: 93 GAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADA 152
+A ++L+ + G + PL A +++ + +GVD+ TA
Sbjct: 115 SQGMAAEVLNELG-KFVPAIGTTMFGGPLIGAATAFSSTYEQSYQDF-KGKGVDEATARN 172
Query: 153 LAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQ 212
LA ++++ + + P A+ + ++A +ASG +N FG + R LE+ GY +MA+
Sbjct: 173 LATQQSLFNAVGMALPAAVGT-TLATRIASGVAINTGFGGLNRYSVGATLEEKGYTEMAK 231
Query: 213 HYRIFDMESLITDGLIGAFFGGMHSKQVQN 242
YR+FD ++++ D ++G FGG+H N
Sbjct: 232 QYRVFDGQAMLVDAVLGGVFGGVHHLTTHN 261
Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 23/166 (13%)
Query: 208 PDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKS 267
P+ + + ++ + + FG ++++ + + L EG+ H
Sbjct: 459 PEQLRLLVSMRLRNMKLEAAVEKVFGIRARERIKPSDIDAAHILNEGL-------HYDIE 511
Query: 268 SSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPH-------FDQEKLQTIADNTLEDPHFK 320
SSP LHTS ++ +H D + L G+ + D I+D E H
Sbjct: 512 SSPVLHTSNESINSHVDAMDEAYRQLNDGQPVNVGGMARGLDGPLRSDISDTYQEQYH-- 569
Query: 321 PHLPEPEPLPQYKEHSDR-QKPSEPLAEHPHPKRKEVERELSEIEG 365
E ++E+ R + SEP++E P P+ + E G
Sbjct: 570 ------EIQKVFEENGVRYETSSEPISESPVPRAESAFSSAGEHRG 609
>gi|30387395|ref|NP_848224.1| hypothetical protein epsilon15p16 [Enterobacteria phage epsilon15]
gi|30266050|gb|AAO06079.1| 16 [Salmonella phage epsilon15]
Length = 634
Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats.
Identities = 52/247 (21%), Positives = 101/247 (40%), Gaps = 6/247 (2%)
Query: 33 GLGKEVINMPARSLDKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIA 92
G K +I+ PA + P+ + ++G L + + P
Sbjct: 58 GFSKRLISDPA-FTADVAPTVNIFRVMFPDADKALNETYDTIGK--QLQDARGYVKPDAG 114
Query: 93 GAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADA 152
A ++L + G + P A +++ + +GVD+ TA
Sbjct: 115 SQGTAAEVLYGLG-QFVPAIGATIFGGPTVGAATAFSSTYEQSYQDF-KGKGVDETTARN 172
Query: 153 LAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQ 212
LA ++++ + + + P A+ + ++ +ASG +N FG + R + LE+ GY +MA+
Sbjct: 173 LATQQSLFNAAGMALPAAVGT-TLTTRIASGVAINTGFGGLNRYSVGETLEEKGYTEMAK 231
Query: 213 HYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGL 272
YR+FD ++++ D ++GA FGG H +N + D + I S P
Sbjct: 232 QYRVFDGQAMLVDAVLGAAFGGAHHLAARNADVPPPPDSEAPIPAAEVQSVPDNSPQPQA 291
Query: 273 HTSFDAY 279
++
Sbjct: 292 ESAPQPA 298
>gi|330007167|ref|ZP_08305909.1| hypothetical protein HMPREF9538_03598 [Klebsiella sp. MS 92-3]
gi|328535514|gb|EGF61974.1| hypothetical protein HMPREF9538_03598 [Klebsiella sp. MS 92-3]
Length = 632
Score = 149 bits (377), Expect = 8e-34, Method: Composition-based stats.
Identities = 55/248 (22%), Positives = 102/248 (41%), Gaps = 10/248 (4%)
Query: 33 GLGKEVINMPARSLDKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIA 92
G K +I+ PA D + P+ + +G L + P
Sbjct: 58 GFSKRLISDPA-FTDNVAPTINMFRVMFPDADKALNESYDDLGK--QLSSAREYIKPEAG 114
Query: 93 GAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADA 152
+A +++ + G ++ P+ A A +++ +GVD++TA
Sbjct: 115 SQGVAAQVIHGLG-QFAPAIGASVIGGPVVGAAAAAGSTYEQAYQDAL-AKGVDEQTART 172
Query: 153 LAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQ 212
+A ++ + + P A+ + +A + SG +N FG + R + LED+GY DMA+
Sbjct: 173 VAAEQSGFNAVGMGLPAAVGGR-LATRLLSGVGINAAFGGLNRFAVGETLEDNGYADMAK 231
Query: 213 HYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVND----LKEGITERLPYKHGVKSS 268
YR+FD ++++ D ++GA FGG H + S+ D + +G T + P
Sbjct: 232 QYRVFDGQAILIDSVLGAAFGGAHHFAARGNSVDARADSTPAVDDGTTAQEPAATAEIQP 291
Query: 269 SPGLHTSF 276
S
Sbjct: 292 QEQPPVSP 299
>gi|319793416|ref|YP_004155056.1| phage-like protein [Variovorax paradoxus EPS]
gi|315595879|gb|ADU36945.1| phage-like protein [Variovorax paradoxus EPS]
Length = 937
Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats.
Identities = 69/321 (21%), Positives = 115/321 (35%), Gaps = 26/321 (8%)
Query: 33 GLGKEVINMPARSLDKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIA 92
GL + + PA L P + + G+ D L L A
Sbjct: 43 GLARGTVAKPALLLGDAATPLLRTSAQAVDKTLGTSLDAWLTDQQKRNTTALEQLRSDPA 102
Query: 93 GAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADA 152
AG+++ L L A+ P A L Y +GV TA A
Sbjct: 103 TTGFAGQVVGG----LFDLGSSAILYTPEGAAVLEGY-----GRRQELIGQGVAPGTATA 153
Query: 153 LAWREAIVHTSALLAPG-------AIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDH 205
+ + AP +++A+ +A GA +V G+ ERG+S +L+
Sbjct: 154 VGAVSGAATYVGVKAPITLGQQAIGQGGRAMAQNLAYGATASVAGGVAERGFSRDLLKAA 213
Query: 206 GYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGV 265
GY + A +D +L + +GA F G + ++R +T H
Sbjct: 214 GYGEQAAPLEPYDKTALAAEATLGALFSGGAAALHARSTVRGQAATDAALTV-TTVDHAQ 272
Query: 266 KSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPE 325
+ ++PG T A AH L+ ++ ++R E + ++ +AD P +P
Sbjct: 273 RGTAPGTPTDARAASAHASALSTAIEQVLRNEPANVGEQ----MADTAFVRP-----VPS 323
Query: 326 PEPLPQYKEHSDRQKPSEPLA 346
PE + + H P P A
Sbjct: 324 PEIRAELQAHVADLLPVGPAA 344
>gi|317120710|gb|ADV02532.1| hypothetical protein SC2_gp040 [Liberibacter phage SC2]
gi|317120771|gb|ADV02592.1| hypothetical protein SC2_gp040 [Candidatus Liberibacter asiaticus]
Length = 408
Score = 116 bits (291), Expect = 7e-24, Method: Composition-based stats.
Identities = 80/381 (20%), Positives = 142/381 (37%), Gaps = 44/381 (11%)
Query: 9 EDIRDNIKEWAQR------PRVSPDIKWHTGLG-------KEVINMPARSLDKLVAPFRE 55
E + IK P PD + T + E I A ++
Sbjct: 10 EKLLQQIKHAMDAGFYRYDPPKKPDYGFWTNITNDVASIPSEFIKGTAEGQVDVITSIST 69
Query: 56 ETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLS--FIPTPLTRLAG 113
+ + + ++V ++ G+ A G LS L +
Sbjct: 70 SLGYYTPHNKITSKPWYNVAEDVGVMGGV---------AHGIGHFLSAFGTGFSLFAINP 120
Query: 114 LALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIAS 173
+ L ++P A + S + EGV ETA A + +
Sbjct: 121 VTLPASPFIGLATASSASGTRRYKE-LRDEGVAHETAKIGALITTGTTFAGGSV-SGVIG 178
Query: 174 QSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFG 233
+S+ +G NV FG+ ER L+ G+ D+AQHYR D T+ +IGA G
Sbjct: 179 KSLVSKAVTGGATNVAFGLGERQSIGAYLDYKGHKDLAQHYREVDGIHTTTEFIIGAGLG 238
Query: 234 GMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKS----SSPGLHTSFDAYEAHTDTLAHG 289
+H K ++ ++ + + +R S+P + T+ + E H TL
Sbjct: 239 ALHGKGGKHPDIKPSDVDIAQVVKR------DIDDIYHSAPAIATTSRSAELHAQTLEQA 292
Query: 290 VDSLVRGEYPHFDQEKLQTIADNTLEDP--HFKPHLPEPEPLPQYKEHSDRQKPSEPLA- 346
++ + RGE + D + + + + + P F P L + L Q ++ +Q+ S+P A
Sbjct: 293 IEKMRRGEEINVDPKSIDLMTKDMITKPEVEFSPEL--KKQLKQGEDFLAQQEVSKPKAL 350
Query: 347 --EHPHPKR-KEVERELSEIE 364
+ P + E ER L+++E
Sbjct: 351 KEQDPLSSQVPEYERRLTDLE 371
>gi|315122889|ref|YP_004063378.1| hypothetical protein CKC_05725 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496291|gb|ADR52890.1| hypothetical protein CKC_05725 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 363
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/245 (17%), Positives = 97/245 (39%), Gaps = 14/245 (5%)
Query: 85 TSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGAL--------YAYLSHKAES 136
+L G++ + ++ A+ + A +
Sbjct: 68 NALTVDPEETGAIGQIGHSLLHSVSAFGIGAMAGGSIGGPLGALAGGFLSVALAEGRRAF 127
Query: 137 SIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERG 196
+ EG D TA + ++ + L P S+ K+ + A +N+ ++R
Sbjct: 128 EN-ARDEGQDSSTATKGGMKTGVISGAGALIPAG-FGVSVVKSAIASAGVNLGLSKLDRM 185
Query: 197 WSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQN----MSLRLVNDLK 252
+L+ +GY ++A+H D S+ TD ++G FGG+H+K + + ++
Sbjct: 186 GDYAILKANGYDELAEHASEMDSISIATDIVLGMAFGGLHAKNARRNKKLVGMKPTPSEG 245
Query: 253 EGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADN 312
+ T ++ + + T+ +++E H +A +LV GE D +KL+ +
Sbjct: 246 DIATGAKNELMTSRTLNDAIPTTNESFETHMSAIAEAEHALVNGEKFGLDSQKLEALERG 305
Query: 313 TLEDP 317
+++ P
Sbjct: 306 SIKKP 310
>gi|315121927|ref|YP_004062416.1| hypothetical protein CKC_00885 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495329|gb|ADR51928.1| hypothetical protein CKC_00885 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 326
Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats.
Identities = 44/245 (17%), Positives = 95/245 (38%), Gaps = 14/245 (5%)
Query: 85 TSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGAL--------YAYLSHKAES 136
+L G++ + ++ A+ + A +
Sbjct: 31 NALTVDPEETGAIGQIGHSLLHSVSAFGIGAMTGGSIGGPLGALAGGFLSVALAEGRRAF 90
Query: 137 SIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERG 196
+ EG D TA + ++ + L P + +AS A +N+ ++R
Sbjct: 91 EN-ARDEGQDSSTATKGGMKTGVISGAGALIPAGFGVSVVKSAIAS-AGVNLGLSKLDRM 148
Query: 197 WSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQN----MSLRLVNDLK 252
+L+ +GY ++A+H D S+ TD ++G FGG+H+K + ++
Sbjct: 149 GDYAILKANGYDELAEHASEMDSISIATDIVLGMAFGGLHAKNARRNKKLAGMKPTPSEG 208
Query: 253 EGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADN 312
+ T ++ + + T+ +++E H +A +LV GE D +KL+ +
Sbjct: 209 DIATGAKNELMTSRTLNDAVPTTNESFETHMSAIAEAEHALVNGEKFGLDSQKLEALERG 268
Query: 313 TLEDP 317
+++ P
Sbjct: 269 SIKKP 273
>gi|332875213|ref|ZP_08443046.1| cation diffusion facilitator family transporter [Acinetobacter
baumannii 6014059]
gi|332736657|gb|EGJ67651.1| cation diffusion facilitator family transporter [Acinetobacter
baumannii 6014059]
Length = 957
Score = 91.4 bits (225), Expect = 3e-16, Method: Composition-based stats.
Identities = 53/325 (16%), Positives = 92/325 (28%), Gaps = 36/325 (11%)
Query: 7 SDEDIRDNIKEWAQRPRVSP-DIKWHTGLGKEVINMPA----RSLDKLVAPFREETHD-Q 60
+ +D + Q P P D G A + D + AP
Sbjct: 12 NQQDFEKLNSQGLQHPDTRPNDPGVFDGAISSPFRGMAIGLNKVGDAISAPIDAVVDRVS 71
Query: 61 PNYYRGSR-------TDPHSVGTGAHLVEGLTSLA--PYIAGAALAGKLLSFIPTPLTRL 111
+ S + + A ++A + G + + L R
Sbjct: 72 YSLKDVSTNEFIEPYEEFKAKREKARDNLVYGTIADLEDKDNTGIVGNIGVGVGDYLWRG 131
Query: 112 AGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAI 171
A L A L + + +GVD+ TA +A A+ P
Sbjct: 132 ALGVATGGTLGAATLTGGSTGNYVYTD-LTRKGVDENTALKVAGVNAVGDAIGTALPIGY 190
Query: 172 ASQS---IAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLI 228
+ + A + S ++L+ +GY A+ Y + ES+ TD LI
Sbjct: 191 GFKGTGGLVADAALSVGGATGLNTGMQYASEQLLKSNGYDKQAKQYEV-TGESVATDLLI 249
Query: 229 ------GAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVK----------SSSPGL 272
GA + G Q+ +N L E ++ P
Sbjct: 250 NSLMFGGARYLGSKQNQLDQDVDAEINQLNSDDFETRNDALNDALVKNSFEFEDTTLPVQ 309
Query: 273 HTSFDAYEAHTDTLAHGVDSLVRGE 297
T H L + +++G+
Sbjct: 310 TTDPVQQNKHYQNLDVATEQILKGQ 334
>gi|254251752|ref|ZP_04945070.1| Soluble lytic murein transglycosylase [Burkholderia dolosa AUO158]
gi|124894361|gb|EAY68241.1| Soluble lytic murein transglycosylase [Burkholderia dolosa AUO158]
Length = 764
Score = 89.0 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/231 (19%), Positives = 79/231 (34%), Gaps = 28/231 (12%)
Query: 87 LAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVD 146
L P +++ + L ++ A+ P+A A+ S + EGVD
Sbjct: 116 LRPDPQNTTTTDQIVQGAVSGLVQIVPAAVLGGPVAGAAVGGASIGLGRSEE-LKREGVD 174
Query: 147 KETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHG 206
T A+ E + + + P +IA+T+ AV + + +L++ G
Sbjct: 175 VGTRTAVGAVEGALGAAGAVLPAG--GSTIARTLGLVAVGGPGMAIGQSTAEKAILKNAG 232
Query: 207 YPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVN--------DLKEGITER 258
Y +A D +L L+ FFGG+H+ + + + N L +
Sbjct: 233 YDHLADQIDPLDPTNLAASTLMAGFFGGLHAGGLASAARTARNADPSTPLPSLDVAARKA 292
Query: 259 LPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSL------VRGEYPHFDQ 303
LPY + A GV RGE + DQ
Sbjct: 293 LPYNSPILD-----------AYATQAAQREGVPPALLLFIKNRGEMSNSDQ 332
>gi|169795395|ref|YP_001713188.1| phage-like protein [Acinetobacter baumannii AYE]
gi|169148322|emb|CAM86187.1| hypothetical protein; putative phage related protein [Acinetobacter
baumannii AYE]
Length = 954
Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/310 (17%), Positives = 91/310 (29%), Gaps = 35/310 (11%)
Query: 21 RPRVSPDIKWHTGLGKEVINMPA----RSLDKLVAPFREETHD-QPNYYRGSR------- 68
+P V ++ G A + D + AP + S
Sbjct: 26 KPTVQKEVGIFDGAISSPFRGMAIGLNKVGDAISAPIDAVVDRVSYSLKDVSTNEFIEPY 85
Query: 69 TDPHSVGTGAHLVEGLTSLA--PYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGAL 126
+ + A ++A + G + + L R A S L A L
Sbjct: 86 EEFKAKREKARDNLVYGTIADLEDKDNTGIVGNIGVGVGDYLWRGALGVATSGTLGAATL 145
Query: 127 YAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAP---GAIASQSIAKTVASG 183
+ + +GVD+ TA +A A+ P G S + A
Sbjct: 146 TGGSTGNYVYTD-LTRKGVDENTALKVAGVNAVGDAIGTALPISYGFKGSGGLVADAALS 204
Query: 184 AVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLI------GAFFGGMHS 237
+ S ++L+ +GY A+ Y + ES+ TD LI GA + G
Sbjct: 205 VGGATGLNTGMQYTSEQLLKSNGYDKQAKQYEV-TGESVATDLLINSLMFGGARYLGTRQ 263
Query: 238 KQVQNMSLRLVNDLKEGITERLPYKHGVK----------SSSPGLHTSFDAYEAHTDTLA 287
Q+ +N L E ++ P T H L
Sbjct: 264 NQLDQDVDAEINQLNSDDFETRNDALNDALVRNSFEFEDTTFPVRTTDPVQQNKHYQNLD 323
Query: 288 HGVDSLVRGE 297
+ +++G+
Sbjct: 324 AATEQILKGQ 333
>gi|293609610|ref|ZP_06691912.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828062|gb|EFF86425.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 954
Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 52/325 (16%), Positives = 94/325 (28%), Gaps = 36/325 (11%)
Query: 7 SDEDIRDNIKEWAQRPRVSP-DIKWHTGLGKEVINMPA----RSLDKLVAPFREETHD-Q 60
+ +D + + Q P + P + +G A + D + AP
Sbjct: 12 NQQDFEELNSKGLQHPDIRPNEPSAFSGAISSPFRGAAIGLNKVGDAISAPIDAVVDRVS 71
Query: 61 PNYYRGSRTDPHS--VGTGAHLVEGLTSLA-------PYIAGAALAGKLLSFIPTPLTRL 111
S + A + +L + G+ L R
Sbjct: 72 YTLKDVSTNEFIEPYEEYKAKREKARDNLVYGAIDKLEDKENTGIVGRFGVGAGDYLWRG 131
Query: 112 AGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAP--- 168
A A L A L + + +GVD+ TA +A A+ P
Sbjct: 132 ALGAATGGTLGAATLTGGSTGNYIYTD-LTRKGVDENTALQVAGINAVGDAIGTALPMSY 190
Query: 169 GAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLI 228
G + + A + S+++L+ G A+ + + ES+ TD +
Sbjct: 191 GFRGTGGLVGDAALSVGGATALNTGVQYTSNQILKAAGNEKEAKQFEV-TGESVATDLAL 249
Query: 229 ------GAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVK----------SSSPGL 272
GA + G KQ+ +N L E + ++ P
Sbjct: 250 NALLFGGARYLGSRQKQLDQDVDAEINQLNADDIETRNDQINDTLVRNSFEFEDTTLPVR 309
Query: 273 HTSFDAYEAHTDTLAHGVDSLVRGE 297
T H L D +++G+
Sbjct: 310 TTDPVQQNKHYQNLDAATDQILKGQ 334
>gi|294648410|ref|ZP_06725909.1| hypothetical protein HMP0015_0118 [Acinetobacter haemolyticus ATCC
19194]
gi|292825715|gb|EFF84419.1| hypothetical protein HMP0015_0118 [Acinetobacter haemolyticus ATCC
19194]
Length = 837
Score = 78.3 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 85/267 (31%), Gaps = 22/267 (8%)
Query: 61 PNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAP 120
+ + ++ + A AG + S I T + + P
Sbjct: 47 TSVSNAASRFVEGDEVADKRMQQVNE-AFTPLNQGTAGHIASGI-TEVVSAGAVGAPLGP 104
Query: 121 LAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAP-GAIASQSIAKT 179
A + E + Q GVD++TAD + + + P + +S+
Sbjct: 105 YGMAATVGLGTRAIEHTKLTQQLGVDQDTADTASNIYGATNAALAFLPVSNVFKKSLIAD 164
Query: 180 VASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIF--DMESLITDGLIGAFFGGMHS 237
A+ V G L+ GY Y+ D ++ + IG+ F
Sbjct: 165 YAALVVAPTAVGQGMTYAEGAYLDSKGYKKQGAMYKDMATDPNAIFMNMAIGSTFFAAG- 223
Query: 238 KQVQNMSLRLVNDLKEGITERLPYK----------HGVKSSSPGLHTSFDAYEAHTDTLA 287
+ M+ + DL E + SS P + + D H L
Sbjct: 224 ---RYMNAKGNADLPEAEVHKAEADFNATVEQAQTDADVSSMPNIADTVDDLAQHEANLN 280
Query: 288 HGVDSLVRGEYPHFDQE---KLQTIAD 311
+D +++GE + + KL+T+ D
Sbjct: 281 QAIDQVMKGEKVNISEATGGKLKTLDD 307
>gi|48697206|ref|YP_024936.1| SLT domain-containing tail structural protein [Burkholderia phage
BcepC6B]
gi|47779012|gb|AAT38375.1| gp16 [Burkholderia phage BcepC6B]
Length = 763
Score = 73.6 bits (179), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 69/199 (34%), Gaps = 9/199 (4%)
Query: 77 GAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAES 136
GA + + P A + + + + L ++ A+ PLA A+ + +
Sbjct: 105 GARAYDLSDTFKPDPTRATAIDQTVQGVVSGLAQIVPAAVLGGPLAGAAVGGASIGMSRA 164
Query: 137 SIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERG 196
+ +GVD T A+ E + + + P +A ++ +T+ A + +
Sbjct: 165 ED-LKRQGVDVGTRTAVGAVEGALTAAGAVLP--VAGSTLPRTIGLVAAGGPGAAIAQAT 221
Query: 197 WSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGIT 256
+L + GY +A D +L L+ F G+H+ + +
Sbjct: 222 IEKAILRNAGYDHLADQINPLDPINLAAATLMAGTFAGVHTAATARTARQ------NAPA 275
Query: 257 ERLPYKHGVKSSSPGLHTS 275
+P + + L
Sbjct: 276 ATVPLQSLAIDARRALPYD 294
>gi|221213943|ref|ZP_03586916.1| SLT domain-containing tail structural protein [Burkholderia
multivorans CGD1]
gi|221166120|gb|EED98593.1| SLT domain-containing tail structural protein [Burkholderia
multivorans CGD1]
Length = 749
Score = 71.3 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 66/188 (35%), Gaps = 4/188 (2%)
Query: 86 SLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGV 145
+ P + + + + LT++ A+ PL A+ + + + +GV
Sbjct: 114 TFKPDPTRTTAIDQTVQGVVSGLTQIVPAAVLGGPLTGAAVGGTSIGMSRAED-LKRQGV 172
Query: 146 DKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDH 205
D T A+ E + + + P +A ++ +TV A + + +L +
Sbjct: 173 DVGTRTAVGAVEGALTAAGAVLP--VAGSTLPRTVGLVAAGGPGAAIAQASIEKAILRNA 230
Query: 206 GYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITE-RLPYKHG 264
Y +A D ++ L+ F G H+ + + + L +
Sbjct: 231 DYDHLADQIDPLDPVNIAASTLMAGVFAGAHTVATARTARQTATAPTASLQSLSLDARRA 290
Query: 265 VKSSSPGL 272
+ ++P L
Sbjct: 291 LPYNAPEL 298
>gi|221201509|ref|ZP_03574548.1| SLT domain-containing tail structural protein [Burkholderia
multivorans CGD2M]
gi|221207935|ref|ZP_03580941.1| SLT domain-containing tail structural protein [Burkholderia
multivorans CGD2]
gi|221172120|gb|EEE04561.1| SLT domain-containing tail structural protein [Burkholderia
multivorans CGD2]
gi|221178777|gb|EEE11185.1| SLT domain-containing tail structural protein [Burkholderia
multivorans CGD2M]
Length = 749
Score = 67.9 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 55/147 (37%), Gaps = 3/147 (2%)
Query: 86 SLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGV 145
+ P + + + + + LT++ A+ PLA A+ + + + +GV
Sbjct: 114 TFKPDPTRTTVIDQTVQGVMSGLTQIVPAAVLGGPLAGAAVGGTSIGMSRAED-LKRQGV 172
Query: 146 DKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDH 205
D T A+ E + + + P +A ++ +TV A + + +L +
Sbjct: 173 DVGTRTAVGAVEGALTAAGAVLP--VAGSTLPRTVGLVAAGGPGAAIAQASIEKAILRNA 230
Query: 206 GYPDMAQHYRIFDMESLITDGLIGAFF 232
Y +A D ++ L+ F
Sbjct: 231 DYDHLADQIDPLDPVNIAASTLMAGVF 257
>gi|226953661|ref|ZP_03824125.1| possible phage-like protein [Acinetobacter sp. ATCC 27244]
gi|226835533|gb|EEH67916.1| possible phage-like protein [Acinetobacter sp. ATCC 27244]
Length = 876
Score = 57.5 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/243 (15%), Positives = 72/243 (29%), Gaps = 22/243 (9%)
Query: 72 HSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQS---APLAAGALYA 128
A + L P G+ + TR+ A+ + + AL +
Sbjct: 55 GDKKAAALRAQNLEIFKPD--DLGGVGEFTYGLTKDFTRIGWNAVTTLGTGGVPGLALNS 112
Query: 129 YLSHKAESSIH---HQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAV 185
L +G D +TA + + P ++S+ +
Sbjct: 113 GLFGYQTFEAEKSDLLNKGADIKTARTGGAIKGVTDALGFAIPTHGVAKSVVADAVATTA 172
Query: 186 LNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGM-------HSK 238
L G+ LE++ +AQ+ + L A GGM +K
Sbjct: 173 LATGAGVAGDYLEGSFLENNENKKVAQYGEALKENATSPSTL--AANGGMALLLNLWANK 230
Query: 239 QVQNMSL----RLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLV 294
V+ + + + +H ++P T+ +H D L ++S +
Sbjct: 231 GRLRPEQIKDHSNVDTMNDAAHIQANIEHAE-GTNPFSPTNAKEANSHFDALDSAMESAL 289
Query: 295 RGE 297
E
Sbjct: 290 NDE 292
>gi|262371857|ref|ZP_06065136.1| predicted protein [Acinetobacter junii SH205]
gi|262311882|gb|EEY92967.1| predicted protein [Acinetobacter junii SH205]
Length = 876
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/243 (15%), Positives = 74/243 (30%), Gaps = 22/243 (9%)
Query: 72 HSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQS---APLAAGALYA 128
A + L P G+ + TR+ A+ + + AL +
Sbjct: 55 GDKKAAALRAQNLEIFKPD--DLGGVGEFTYGLTKDFTRIGWNAVTTLGTGGVPGLALNS 112
Query: 129 YLSHKAESSIH---HQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAV 185
L +G D +TA + + ++ P ++S+ +
Sbjct: 113 GLFGYQTFEAEKSDLLNKGADVKTARTGGAIKGLADAASFAIPTHGVAKSVVADAVATTA 172
Query: 186 LNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGM-------HSK 238
L G+ L+ + +AQ+ +L L A GGM +K
Sbjct: 173 LATGAGVAGDYLEGSFLKTNENKKVAQYGEALKENALSPSTL--AANGGMALLLNLWANK 230
Query: 239 QVQNMSL----RLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLV 294
V+ + + + +H ++P T+ +H D L ++S +
Sbjct: 231 GRLRPEQIKDHSNVDTMNDAAHIQANIEHAE-GTNPFSPTNAKEANSHFDALDSAMESAL 289
Query: 295 RGE 297
E
Sbjct: 290 NDE 292
>gi|158425958|ref|YP_001527250.1| hypothetical protein AZC_4334 [Azorhizobium caulinodans ORS 571]
gi|158332847|dbj|BAF90332.1| conserved hypothetical exported protein [Azorhizobium caulinodans
ORS 571]
Length = 386
Score = 46.7 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 34/206 (16%), Positives = 63/206 (30%), Gaps = 36/206 (17%)
Query: 31 HTGLGKEVINMPARSLDKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGL-TSLAP 89
+ +G + N +LD+ V P T + + + +V A ++ +
Sbjct: 159 YVMVGAILTNKAPVTLDQ-VTPIARLTEETEAIAVPAASPIKTVQELAEAIKANPAKVTW 217
Query: 90 YIAGAALAGKLL------------SFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESS 137
A + S I G AL A + G + A +S E
Sbjct: 218 AGGSAGGVDHIAAALFAQAAGADPSKINYIPFSGGGEAL--AAVLGGKVTAGISGYGEFE 275
Query: 138 IHHQI--------------EGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASG 183
+ EGVD T + I + ++AP + + + A
Sbjct: 276 SQVKAGKLRILAVTAGERVEGVDAPTLTEAGLKLKITNWRGVVAPPGLNPEQVKTLTA-- 333
Query: 184 AVLNVPFGMVERGWSSKVLEDHGYPD 209
M + ++VL+ G+ D
Sbjct: 334 ----TVEKMAKSPAWAEVLKQKGWDD 355
>gi|315122596|ref|YP_004063085.1| hypothetical protein CKC_04240 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495998|gb|ADR52597.1| hypothetical protein CKC_04240 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 283
Score = 45.9 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 54/146 (36%), Gaps = 5/146 (3%)
Query: 96 LAGKLLSF-IPTPLTRLAGLALQSAPLAA---GALYAYLSHKAESSIHHQIEGVDKETAD 151
A ++ + + + G + + P A G L ++ ++S + + G+D+ T+
Sbjct: 103 TAHSIVEGAVIYGIGNIIGSSFSANPFVASLVGLLTISATYGHQTSENMKHLGIDESTSQ 162
Query: 152 ALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMA 211
L + + P K + +GA + E+ ++ L GY +
Sbjct: 163 TLGLLSGGFYMLSFAIPYIHRGDVSLKKIINGAGQQIATRTTEQLTTNGTLYFQGY-EKE 221
Query: 212 QHYRIFDMESLITDGLIGAFFGGMHS 237
+ + ++I D ++ G +
Sbjct: 222 EPTEGWSNYTVIVDVILTVGLGLISR 247
>gi|183986749|ref|NP_001116963.1| BCL2-associated transcription factor 1 [Xenopus (Silurana)
tropicalis]
gi|171846367|gb|AAI61609.1| bclaf1 protein [Xenopus (Silurana) tropicalis]
Length = 894
Score = 43.2 bits (100), Expect = 0.091, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 53/143 (37%), Gaps = 20/143 (13%)
Query: 232 FGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVD 291
F G + + L + L R P H V P + + D D
Sbjct: 598 FKGCGKTLNERFTDCLKDTLDHVSHLRRPEIHRVIDIPPNIP---KKHIRIQDE-----D 649
Query: 292 SLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHP 351
++ E +++K +++D + H K H E L +E S+ QK +P
Sbjct: 650 KAIKKETAKVEKKKKSSLSDQRCDVQHKKEHSKERVDLTCSRESSNSQKKEKP------- 702
Query: 352 KRKEVERELSEIEGAKKESSARK 374
++EL E + K+ES +K
Sbjct: 703 -----QKELKEFKIFKEESKRKK 720
>gi|320168701|gb|EFW45600.1| G protein-coupled receptor [Capsaspora owczarzaki ATCC 30864]
Length = 4644
Score = 43.2 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 73/267 (27%), Gaps = 30/267 (11%)
Query: 47 DKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPT 106
L +P D + + T + G V + I A +L +
Sbjct: 2503 ASLASPLSVTFGDGSS---QASTFITILNNGLPRVTSTAVITLSIGSAGAYARLGTNTTF 2559
Query: 107 PL-------------TRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKET-ADA 152
L AL APLA A + ++ G T
Sbjct: 2560 TLTIPAHNNPHGAVSFAAGSQALTVAPLAGAA--------SSIQLNLTRTGGSIGTLVVT 2611
Query: 153 LAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQ 212
V G + +A TV A F MV + D G+ +
Sbjct: 2612 YQTSAGGVAGIEAATAGEDFTPIVAATVTIPAGSASAFVMVTIPSNVAPELDRGFQVLLT 2671
Query: 213 HYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGL 272
+ + D+ + +G+ + + N++L ND + +S L
Sbjct: 2672 NVAVSDLTNTGATPSLGS-----GAASMSNVTLSAQNDPNGVFEFAVTSVVADSTSGSYL 2726
Query: 273 HTSFDAYEAHTDTLAHGVDSLVRGEYP 299
+ + G S+ +YP
Sbjct: 2727 LVVHRSAGTVGAAVLTGTASVSGQQYP 2753
>gi|117619037|ref|YP_856875.1| hypothetical protein AHA_2352 [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117560444|gb|ABK37392.1| conserved hypothetical protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 229
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 39/138 (28%), Gaps = 2/138 (1%)
Query: 12 RDNIKEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQPNYYRGSRTDP 71
D +KE A P W GL M A L T Y + +
Sbjct: 48 NDRLKEEAGELTRVPKADWLVGLAGGSHVMAA--FTHLNPEGARFTTGDFGGYYCAPSLD 105
Query: 72 HSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLS 131
++ + E + A + + L + G A + PL Y Y
Sbjct: 106 TAIKETVYHQERVFGYTREPAQKVQMRVIHAEFSASLVDITGEAFLATPLYHATDYGYSQ 165
Query: 132 HKAESSIHHQIEGVDKET 149
A ++G+ +
Sbjct: 166 AFAREQKALDVDGICYRS 183
>gi|189240286|ref|XP_973010.2| PREDICTED: similar to K11G12.5 [Tribolium castaneum]
Length = 287
Score = 42.1 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 68/191 (35%), Gaps = 32/191 (16%)
Query: 179 TVASGAVLNVPFGMVERGWSSKVLEDHGYP-------DMAQHYRIFDMESLITDGLIGAF 231
+ V + G S+ +L Y + + + D +S + + A
Sbjct: 47 RLTVNIVKKQGVTALYNGLSASLLRQLTYSTTRFGIYESVKQ--LMDKDSSFSARVALAA 104
Query: 232 F----GGMHSKQVQNMSLRLVNDLKEGITERLPYKHGV-----KSSSPGLHTSFDAYEAH 282
F GG+ +++R+ ND+K + +RL YKH + G+ F A
Sbjct: 105 FAGSAGGLVGTPADKINVRMQNDIKLPLDKRLNYKHALDGLLRVYKEEGIPRLFSGATAA 164
Query: 283 TDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLED---PHFKPHLPE-------PEPLPQY 332
T + ++ G+ +DQ K + + ED HF L +PL
Sbjct: 165 --TFRAALMTI--GQLSFYDQIKKTLLTTDYFEDNLTTHFVSSLTAGAIATTLTQPLDVL 220
Query: 333 KEHSDRQKPSE 343
K + KP E
Sbjct: 221 KTRTMNAKPGE 231
>gi|270011578|gb|EFA08026.1| hypothetical protein TcasGA2_TC005615 [Tribolium castaneum]
Length = 286
Score = 42.1 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 68/191 (35%), Gaps = 32/191 (16%)
Query: 179 TVASGAVLNVPFGMVERGWSSKVLEDHGYP-------DMAQHYRIFDMESLITDGLIGAF 231
+ V + G S+ +L Y + + + D +S + + A
Sbjct: 46 RLTVNIVKKQGVTALYNGLSASLLRQLTYSTTRFGIYESVKQ--LMDKDSSFSARVALAA 103
Query: 232 F----GGMHSKQVQNMSLRLVNDLKEGITERLPYKHGV-----KSSSPGLHTSFDAYEAH 282
F GG+ +++R+ ND+K + +RL YKH + G+ F A
Sbjct: 104 FAGSAGGLVGTPADKINVRMQNDIKLPLDKRLNYKHALDGLLRVYKEEGIPRLFSGATAA 163
Query: 283 TDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLED---PHFKPHLPE-------PEPLPQY 332
T + ++ G+ +DQ K + + ED HF L +PL
Sbjct: 164 --TFRAALMTI--GQLSFYDQIKKTLLTTDYFEDNLTTHFVSSLTAGAIATTLTQPLDVL 219
Query: 333 KEHSDRQKPSE 343
K + KP E
Sbjct: 220 KTRTMNAKPGE 230
>gi|157849706|gb|ABV89636.1| catalytic/coenzyme binding protein [Brassica rapa]
Length = 624
Score = 42.1 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 40/107 (37%), Gaps = 8/107 (7%)
Query: 260 PYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHF 319
PY P T + +DTLA GE T+A E+
Sbjct: 473 PYASYENLKPPSSPTPKASGIQKSDTLAPVPTDSDTGES--------STVATTVTEEAEA 524
Query: 320 KPHLPEPEPLPQYKEHSDRQKPSEPLAEHPHPKRKEVERELSEIEGA 366
P +P+ PL Y ++D + P+ P PK+ E+SE+ G
Sbjct: 525 PPAIPKMRPLSPYAAYADLKPPTSPTPASTGPKKTAPAEEISELPGG 571
>gi|311899845|dbj|BAJ32253.1| hypothetical protein KSE_64930 [Kitasatospora setae KM-6054]
Length = 385
Score = 42.1 bits (97), Expect = 0.22, Method: Composition-based stats.
Identities = 47/245 (19%), Positives = 75/245 (30%), Gaps = 17/245 (6%)
Query: 65 RGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAG 124
+ P G + T L P A LA + G L A
Sbjct: 94 NTTSFHPVGHRVGPDDILKTTVLTPPPAPTGLAPDHGPSAGGGRVTITGRHLTGATAVDF 153
Query: 125 ALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPG-------AIASQSIA 177
A + +S V A A + +PG + A
Sbjct: 154 GGVAATAFTVDSDTRITAT-VPAGKATGKAEVT-VTTAGGTGSPGQYTYDVPTPGGYTFA 211
Query: 178 KTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGA-FFGGMH 236
K+ A + V G +R + + HG + + D+ ++ D ++GA G
Sbjct: 212 KSAAPASGSTVRVG--DRVTYTVTVRQHGDGAVTGARVVDDLSGVLDDAVLGADVAAGSG 269
Query: 237 SKQVQNMSLRLVNDLKEG----ITERLPYKHGVKSSSPGLHTSFDAYEAH-TDTLAHGVD 291
+ V+N L DL G IT + K+G G ++ D D + +
Sbjct: 270 TVAVRNGKLTWNGDLPVGGSTTITYSVTVKNGGDRRLSGAVSAPDDARGTCDDGKSCATE 329
Query: 292 SLVRG 296
VRG
Sbjct: 330 HTVRG 334
>gi|258591977|emb|CBE68282.1| Membrane protein involved in aromatic hydrocarbon degradation [NC10
bacterium 'Dutch sediment']
Length = 447
Score = 42.1 bits (97), Expect = 0.22, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 33/101 (32%), Gaps = 7/101 (6%)
Query: 92 AGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETAD 151
A + F P LTRL G L + +H + S H + ++
Sbjct: 41 AALGEDASTVFFNPAGLTRLKGSQLSMV----ASAVGPSAHFSNSRSHPSTSAI---SSI 93
Query: 152 ALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGM 192
L + S + P + + + G N PFG+
Sbjct: 94 PLTGGDGGDAGSWAMVPAGYYATDVTSRLKFGVGFNAPFGL 134
>gi|83644487|ref|YP_432922.1| choline dehydrogenase-like flavoprotein [Hahella chejuensis KCTC
2396]
gi|83632530|gb|ABC28497.1| Choline dehydrogenase and related flavoprotein [Hahella chejuensis
KCTC 2396]
Length = 1963
Score = 42.1 bits (97), Expect = 0.24, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 51/179 (28%), Gaps = 26/179 (14%)
Query: 89 PYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKE 148
P A ++G+L + L G A+ P + KA++ + GVD
Sbjct: 534 PDDASTVMSGQLPGGRVITVHPLGGCAMGDGPDTGVVNHYGQVFKADN----RAHGVD-- 587
Query: 149 TADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYP 208
A A E + + P A+ A + W + ++ P
Sbjct: 588 ---APALHEGLYVLDGSILPAALGVNPFLTISALSLRAAEAI-QKQHDWLAPT-QERVDP 642
Query: 209 DMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKS 267
++AQ + T S + + E + RL +
Sbjct: 643 ELAQALSPMRQPAATTTA---------------RPSPTVTLSISEQMFGRLQAQEVHTD 686
>gi|254523015|ref|ZP_05135070.1| outer membrane autotransporter barrel domain protein
[Stenotrophomonas sp. SKA14]
gi|219720606|gb|EED39131.1| outer membrane autotransporter barrel domain protein
[Stenotrophomonas sp. SKA14]
Length = 3615
Score = 41.7 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 55/189 (29%), Gaps = 34/189 (17%)
Query: 75 GTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQS-APLAAGALYAYLSHK 133
G G+ + G T+L A G ++ L LA L +S
Sbjct: 1485 GNGSLVKNGATTLTLSAANTYTGGTTINDGTLALGLGGSLAAAGDVTLGNAGAAFDISGA 1544
Query: 134 AESSIHHQIEGV------------DKETADALAWREAIVHTSALLAPGAIASQSIAKTVA 181
+ S + GV TA A+ ++ S L Q+++
Sbjct: 1545 SGSQTIGALNGVGGTTLALGGNSLTFGTASNAAFG-GVISGSGGLVKVGAGVQTLSGANT 1603
Query: 182 SGAVLN-------------VPFGMVERGWSSKVLEDHGYPDMA------QHYRIFDMESL 222
G + V G + G +S L+ G +A + +L
Sbjct: 1604 FGGGVTLNAGGLVLGNDAAVGTGALTVGGAS-TLDTTGLATLANNIALNAGLTVLGTNAL 1662
Query: 223 ITDGLIGAF 231
+G++
Sbjct: 1663 TLNGVLSGA 1671
Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 46/145 (31%), Gaps = 14/145 (9%)
Query: 70 DPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQ--------SAPL 121
+ ++G+GA V G +L ALA + + L AL + +
Sbjct: 621 NAAALGSGALSVGGNVTLDGTTGALALANTVNLGAGSILNLPGNQALTFNGVIGGTGSLV 680
Query: 122 AAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVA 181
GA L++ S + TA L + L G + ++
Sbjct: 681 KNGATTLTLNNANTFSGGLSL------TAGGLVLGNGGALGTGALNVGGAVTLDAGSALS 734
Query: 182 SGAVLNVPFGMVERGWSSKVLEDHG 206
G +N+ G + S L G
Sbjct: 735 VGNGINLGVGGLLNVLGSNALTLGG 759
>gi|209515507|ref|ZP_03264372.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. H160]
gi|209503974|gb|EEA03965.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. H160]
Length = 268
Score = 41.7 bits (96), Expect = 0.27, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 61/200 (30%), Gaps = 43/200 (21%)
Query: 133 KAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGM 192
+E+ I ++ + A + + A NV
Sbjct: 2 FSETQIGARLAQI-FNLTGKTAVVTGSAQGLGRET----------ARLLAEAGANVVIAD 50
Query: 193 VERGWSSKV---LEDHGYPDMAQHYRIFDMESL-ITDGLIGAFFGGM--------HSK-- 238
+ +S +E G M + D S+ ++ A FGG+ H
Sbjct: 51 LNPNAASATAADIEASGGIAMPCQVDVADEASVKALFAVVDAKFGGVNILINNAAHRSKA 110
Query: 239 -----------QVQNMSLRLVNDL-KEGITERLPYKHG-----VKSSSPGLHTSFDAYEA 281
Q+QN++LR +E IT R+ K SS L + A
Sbjct: 111 EFFEMSVEQWDQMQNVTLRGTFLCCREAIT-RMKAKSSGGSIVNISSVGALRPTLWGVNA 169
Query: 282 HTDTLAHGVDSLVRGEYPHF 301
H D GVDS+ R F
Sbjct: 170 HYDAAKAGVDSITRSLASEF 189
>gi|322504305|emb|CAM41701.2| hypothetical protein, unknown function [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 2392
Score = 41.7 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 56/200 (28%), Gaps = 27/200 (13%)
Query: 31 HTGLGKEVINMPARSLDKLVAPFREETHDQPNYYRGSRTDPH---SVGTGAHLVE-GLTS 86
+ G ++ LV P + + SV + E + S
Sbjct: 734 FSAPGASLLRG---HTALLVPPNADGRSPTTCPTSATAEHIQLPISVPPSSTAGEIAVAS 790
Query: 87 LAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAG---ALYAYLSHK---------- 133
P + A + L + +AP L L
Sbjct: 791 FTPASSTVGTAYLVCVGQAGAFVPTGALTVATAPTVTADPSPLAFGLPAYVFFSSAIMSL 850
Query: 134 AESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMV 193
+++ I+ D T+D A V + + P A+Q S AV +V +
Sbjct: 851 SQADTFTVIKVTDSCTSD---LSVATVLATGSIIPSTGAAQPFLVPSLSSAVTSVRLCVA 907
Query: 194 ERG-WSSKVLEDHGYPDMAQ 212
+R K L GY D
Sbjct: 908 QRSQLVDKTL---GYADAGA 924
>gi|154332420|ref|XP_001562584.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 2392
Score = 41.7 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 56/200 (28%), Gaps = 27/200 (13%)
Query: 31 HTGLGKEVINMPARSLDKLVAPFREETHDQPNYYRGSRTDPH---SVGTGAHLVE-GLTS 86
+ G ++ LV P + + SV + E + S
Sbjct: 734 FSAPGASLLRG---HTALLVPPNADGRSPTTCPTSATAEHIQLPISVPPSSTAGEIAVAS 790
Query: 87 LAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAG---ALYAYLSHK---------- 133
P + A + L + +AP L L
Sbjct: 791 FTPASSTVGTAYLVCVGQAGAFVPTGALTVATAPTVTADPSPLAFGLPAYVFFSSAIMSL 850
Query: 134 AESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMV 193
+++ I+ D T+D A V + + P A+Q S AV +V +
Sbjct: 851 SQADTFTVIKVTDSCTSD---LSVATVLATGSIIPSTGAAQPFLVPSLSSAVTSVRLCVA 907
Query: 194 ERG-WSSKVLEDHGYPDMAQ 212
+R K L GY D
Sbjct: 908 QRSQLVDKTL---GYADAGA 924
>gi|115398972|ref|XP_001215075.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191958|gb|EAU33658.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1004
Score = 41.3 bits (95), Expect = 0.32, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 20/98 (20%)
Query: 309 IADNTLEDPHFKPHLPEPEPLPQYKEH---------------SDRQKPSEPLAEHPHPKR 353
+AD T PH + +P PEP +E+ +D+QKP+ P AEHP PKR
Sbjct: 1 MADTT---PHSEEPIPRPEPTEPSQENNDTTASPAPAQNGSPADKQKPTPP-AEHPLPKR 56
Query: 354 KEV-ERELSEIEGAKKESSARKFFDEGSPDHSPFKGER 390
+ + ER + SA D P +P + ++
Sbjct: 57 RRMEERHQKPRRRGRTPPSAYSRRDGDEPSATPTRNDQ 94
>gi|284034782|ref|YP_003384713.1| major facilitator superfamily protein [Kribbella flavida DSM 17836]
gi|283814075|gb|ADB35914.1| major facilitator superfamily MFS_1 [Kribbella flavida DSM 17836]
Length = 417
Score = 41.3 bits (95), Expect = 0.35, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 48/165 (29%), Gaps = 9/165 (5%)
Query: 82 EGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQ 141
+ +AP AL G+ L + + LT A +A AL E
Sbjct: 186 DETEEVAPGTGRTAL-GRYLLMLRSGLTEAATSRTVRKAVALVALLGGFLSFDEY-FPLL 243
Query: 142 IEGVDKETADALAWREAIVHTSALLAPGAIASQSI--AKTVASGAVLNVPFGMVERGWSS 199
V T V A+ G L V G++ G S
Sbjct: 244 AREVGASTGLVPLLIAGTVAAQAI---GGALGGPAYRLPATVFAVGLAVTAGLIAWGSLS 300
Query: 200 KVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMS 244
G+ +A Y + + ++ D + G V ++S
Sbjct: 301 GT--AGGFLPIAVGYGVMQLVIIVADARLQDAIEGPARATVTSVS 343
>gi|327184111|gb|AEA32558.1| membrane protein [Lactobacillus amylovorus GRL 1118]
Length = 1241
Score = 41.3 bits (95), Expect = 0.35, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 70/221 (31%), Gaps = 19/221 (8%)
Query: 59 DQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQS 118
D + + + A L + P A A L + + L ++ A Q
Sbjct: 760 DTSSLTSLASQVSTLKQSIAQLAQASNQALPGAATA------LKQLSSGLGQVQAAASQG 813
Query: 119 APLA-----AGALYAYLSHKAESSIHHQIEGVDKETADALAWREA---IVHTSALLAPGA 170
A A + + S + G + +A A + LA GA
Sbjct: 814 VAGAQRLNSGAAALNSGAGRLNSGLGTLSAGAGRLSAGAGQLDSGAGQLQSGLGTLANGA 873
Query: 171 IASQSIAKTVASGAVL-NVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIG 229
S T+A+GA N G + G + ++ ++G +A + G
Sbjct: 874 GQLNSGLGTLANGAGTLNTGLGTLANG-AGQL--NNGVGQLASQAPQLISGIGQLNSGAG 930
Query: 230 AFFGGMHSKQVQNMSLRL-VNDLKEGITERLPYKHGVKSSS 269
G + L ++ + G+ + Y G+ SS+
Sbjct: 931 QLASGAGKLASRVPQLTTGIDTVNSGLGQGETYLKGLGSSA 971
>gi|237838371|ref|XP_002368483.1| hypothetical protein TGME49_090990 [Toxoplasma gondii ME49]
gi|211966147|gb|EEB01343.1| hypothetical protein TGME49_090990 [Toxoplasma gondii ME49]
Length = 2520
Score = 41.3 bits (95), Expect = 0.36, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 54/153 (35%), Gaps = 10/153 (6%)
Query: 85 TSLAPYIAGAALAGKLLSFIPTPLTR-----LAGLALQSAPLAAGALYAYLSHKAESSIH 139
+ L P + LAG +++F LA S P++ G H A +
Sbjct: 197 SELNPSPSS--LAGGIVTFASPDFFPATVSGLAASTSMSWPVSVGISAGGRGHAATTPFA 254
Query: 140 HQIEGVDKETADALAWREAIVH--TSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGW 197
+ A +V+ T+ ++ PG + + A GA +P G
Sbjct: 255 APPGAAAYPLSHARIPGGDLVYYLTAGVVLPGGAGA-GVVPAGALGAGTILPPGATFLSH 313
Query: 198 SSKVLEDHGYPDMAQHYRIFDMESLITDGLIGA 230
+S + G AQ+ R+ D +L GA
Sbjct: 314 ASAGENNGGAMVSAQNARVGDHVALAGKAKQGA 346
>gi|256391150|ref|YP_003112714.1| MMPL domain-containing protein [Catenulispora acidiphila DSM 44928]
gi|256357376|gb|ACU70873.1| MMPL domain protein [Catenulispora acidiphila DSM 44928]
Length = 760
Score = 40.9 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 47/293 (16%), Positives = 87/293 (29%), Gaps = 29/293 (9%)
Query: 9 EDIRDNIKEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQPN--YYRG 66
+ + + + A P V+ + G + ++ F +E HD P+
Sbjct: 86 QRMTGALNQIATAPGVAGVTGPYDGPRGALQVSKDQTTAYATINFAQEAHDLPDAEVQHI 145
Query: 67 SRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLL-----SFIPTPLTRLAGLALQSAPL 121
+ T + G +++ A L+ + + R AG A+
Sbjct: 146 IDVAQGARETNLQVELGGQAISQAERKIGGAADLIGVLAALLVLGLVFRAAGAAVMPILT 205
Query: 122 AAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSAL-------LAPGAIASQ 174
+ + + S I A + I + + L G
Sbjct: 206 GVAGVATGILGTGQLSHLFAISSTAPTLATLVGLGVGIDYALFIVNRHRKGLMSGLSVED 265
Query: 175 SIAKTV---------ASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITD 225
SIAK + A G V+ GM G S +G A M L
Sbjct: 266 SIAKALNTSGRAVIFAGGTVVIALLGMFALGLSFL----NGMAIGAAV--TVSMTVLAAI 319
Query: 226 GLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDA 278
L+ A G + + + R + + G+ +PY H + G+ +
Sbjct: 320 TLLPAMLGFLKLRVLSKKQRRELAARQAGVGVLVPYAHASRRRPSGVPGHPET 372
>gi|253570523|ref|ZP_04847931.1| predicted protein [Bacteroides sp. 1_1_6]
gi|251839472|gb|EES67555.1| predicted protein [Bacteroides sp. 1_1_6]
Length = 642
Score = 40.9 bits (94), Expect = 0.47, Method: Composition-based stats.
Identities = 42/253 (16%), Positives = 90/253 (35%), Gaps = 33/253 (13%)
Query: 9 EDIRDNIKEWAQRPRVSPDIKWHTGLG--KEVINMPARSLDKLVAPFREETHDQPNYYRG 66
++IRD+ + + P +++ T + + NM + LD ++A T
Sbjct: 71 DNIRDSFNDAIE-----PGVRFETAVAEMSGITNMEGKELD-VLATKARNTAKAFGVDAS 124
Query: 67 SRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGAL 126
+ + + L+ + P + A A +++S L++ + A +A
Sbjct: 125 NAMVVYK--------DLLSKITPELKKAPDALEIMSNNVMTLSKTMQNDVPGA--SAAMS 174
Query: 127 YAYLSHKAESSIHHQIEGV--DKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGA 184
A +K + D A E + ++++ +T +
Sbjct: 175 TAMNQYKVSLDDPMKAAQTMTDYMNIMAAGTVEGSAEIREV-------AEALKQTGSVAK 227
Query: 185 VLNVPFGMVERGWSSKVLEDHGYPD----MAQHYRIFDMESLITDGLIGAFFGGMHSKQV 240
V F E ++L+ G +A I +++ TD + G++ K +
Sbjct: 228 TFGVEF--AETNSLIQLLDKSGKKGSEGGIALRNTIVKLQAPTTDAIKQLKAAGVNIKTM 285
Query: 241 QNMSLRLVNDLKE 253
QN SL L + L+
Sbjct: 286 QNQSLSLTDRLRA 298
>gi|311245483|ref|XP_001925661.2| PREDICTED: ninein isoform 1 [Sus scrofa]
Length = 2136
Score = 40.9 bits (94), Expect = 0.50, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 77/187 (41%), Gaps = 23/187 (12%)
Query: 245 LRLVNDLKEGITERLPYKH------GVKSSSPGLHTSFDAYEAHTDTLA-HGVDSLVRGE 297
LR+ KE + + + H G K+ +P + T + L+ +D L+ E
Sbjct: 1792 LRMTQQEKEALKQEVMSLHKQLQNAGDKNWAPEVATHPSGFPNQQQRLSWDKLDQLMNEE 1851
Query: 298 YPHF--DQEKLQTIADNT-LEDPHFKPHLPEPEP---LPQYKEH---SDRQKPSEPL--- 345
+ E+LQT+ NT E H + + + E LP++++H S KP E
Sbjct: 1852 QQLLWQENERLQTVVQNTKAELIHSREKVRQLESNLLLPKHQKHLSSSGTMKPPEQEKLS 1911
Query: 346 ----AEHPHPKRKEVERELSEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDPMRGAD 401
E +R R++S++ ++E +EG E+ ++ +R
Sbjct: 1912 LKRECEQVQKERSPTNRKVSQMNSLERELETIHLENEGLKKKQVKLDEQLMEMQHLRSTM 1971
Query: 402 FTDAPHA 408
F+ +P+A
Sbjct: 1972 FSPSPNA 1978
>gi|253748668|gb|EET02688.1| Hypothetical protein GL50581_25 [Giardia intestinalis ATCC 50581]
Length = 3182
Score = 40.9 bits (94), Expect = 0.52, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 57/156 (36%), Gaps = 12/156 (7%)
Query: 123 AGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAP----GAIASQSIAK 178
A ++ + + + K+ AD++ E + T+ P G S+ + +
Sbjct: 597 ATSVAGANQGTSNLTPIRTRQRSHKDWADSVIANEGLYETADTAIPDYRDGFCGSKYVGR 656
Query: 179 TVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSK 238
T++ A G ++G + L+ A H ++ + L ++GA G
Sbjct: 657 TISGTARAISGAGSSQQGRALSALQRPSSNR-ALHSSMYVAQHLSNSAVLGASSGAQRRD 715
Query: 239 QVQNMSLRL--VNDLKEGITERLPYKHGVKSSSPGL 272
S + ++D+ E P+ SS G+
Sbjct: 716 SSARPSQKWARLDDIDEN-----PHSPATTSSKEGV 746
>gi|311245485|ref|XP_003121856.1| PREDICTED: ninein isoform 2 [Sus scrofa]
Length = 2049
Score = 40.5 bits (93), Expect = 0.54, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 77/187 (41%), Gaps = 23/187 (12%)
Query: 245 LRLVNDLKEGITERLPYKH------GVKSSSPGLHTSFDAYEAHTDTLA-HGVDSLVRGE 297
LR+ KE + + + H G K+ +P + T + L+ +D L+ E
Sbjct: 1792 LRMTQQEKEALKQEVMSLHKQLQNAGDKNWAPEVATHPSGFPNQQQRLSWDKLDQLMNEE 1851
Query: 298 YPHF--DQEKLQTIADNT-LEDPHFKPHLPEPEP---LPQYKEH---SDRQKPSEPL--- 345
+ E+LQT+ NT E H + + + E LP++++H S KP E
Sbjct: 1852 QQLLWQENERLQTVVQNTKAELIHSREKVRQLESNLLLPKHQKHLSSSGTMKPPEQEKLS 1911
Query: 346 ----AEHPHPKRKEVERELSEIEGAKKESSARKFFDEGSPDHSPFKGERNQKLDPMRGAD 401
E +R R++S++ ++E +EG E+ ++ +R
Sbjct: 1912 LKRECEQVQKERSPTNRKVSQMNSLERELETIHLENEGLKKKQVKLDEQLMEMQHLRSTM 1971
Query: 402 FTDAPHA 408
F+ +P+A
Sbjct: 1972 FSPSPNA 1978
>gi|159118813|ref|XP_001709625.1| Hypothetical protein GL50803_113986 [Giardia lamblia ATCC 50803]
gi|157437742|gb|EDO81951.1| hypothetical protein GL50803_113986 [Giardia lamblia ATCC 50803]
Length = 272
Score = 40.5 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 48/134 (35%), Gaps = 6/134 (4%)
Query: 103 FIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHT 162
F P L L AL+ P+ S+ +D A+ + + +V
Sbjct: 41 FDPIGLGDLG--ALEVTPVTFDPKIPGFILDTIRSLCPCALSIDDAAEGAMTFEQQVV-- 96
Query: 163 SALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMA-QHYRIFDMES 221
+ IA + A A RG + + GY +A H+ + D+E+
Sbjct: 97 -GMDVSAKIARLDASGQEARKASACSVCSRCRRGTLASFVSAGGYDALALGHHLLDDLET 155
Query: 222 LITDGLIGAFFGGM 235
L G+ GA F G+
Sbjct: 156 LAITGVHGASFFGL 169
>gi|225375687|ref|ZP_03752908.1| hypothetical protein ROSEINA2194_01312 [Roseburia inulinivorans DSM
16841]
gi|257437541|ref|ZP_05613296.1| conserved hypothetical protein [Faecalibacterium prausnitzii
A2-165]
gi|225212457|gb|EEG94811.1| hypothetical protein ROSEINA2194_01312 [Roseburia inulinivorans DSM
16841]
gi|257199848|gb|EEU98132.1| conserved hypothetical protein [Faecalibacterium prausnitzii
A2-165]
Length = 701
Score = 40.5 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 47/237 (19%), Positives = 88/237 (37%), Gaps = 26/237 (10%)
Query: 244 SLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHG-------------V 290
+ R++ + T + K K+ + + + TD
Sbjct: 81 TERVMKHIDAAHTRKASKKAVRKAQAEATAGTKSSRLQFTDEERAAPELEKYIKKSDKAA 140
Query: 291 DSLVRGEYPHFDQEKL--QTIADNTLEDPHFKPHLPEPEPLPQYKE-HSDRQKPSEPLAE 347
D L + + ++KL + D T + H E + P +KE H+ +P++
Sbjct: 141 DRLDKAKAAIPKEKKLVKERTFDETTGKGKTRLHFEEKDKPPGFKEKHNPLSRPTQEAGI 200
Query: 348 HPHPKRKEVERELSEIEGA-KKESSARKFFDEGSPDHSPFKGERNQKLDP----MRGADF 402
H K VE++ S +EGA K E +A + G+ +G RN KL P +
Sbjct: 201 LVHNKIHSVEKDNSGVEGAHKSEEAAERGLKYGARKIK--QGYRNHKLKPYREAAKAEKA 258
Query: 403 TDAPHAKFDATTFTESLPHVDEQTMHRF---SELKERHPVEAREVLEGLQEKLQGTK 456
+ F P + + RF ++K ++ EAR +G++ + T+
Sbjct: 259 AFRANMDFQYHKTLHENPQLTSNPISRFWQKQKIKRQYAKEARNTAKGIKGAAERTR 315
>gi|119476211|ref|ZP_01616562.1| ammonium transporter [marine gamma proteobacterium HTCC2143]
gi|119450075|gb|EAW31310.1| ammonium transporter [marine gamma proteobacterium HTCC2143]
Length = 431
Score = 40.5 bits (93), Expect = 0.61, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 35/126 (27%), Gaps = 1/126 (0%)
Query: 63 YYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLA 122
G +V G G T++ P+ + G + ++ +
Sbjct: 191 ITAGVAALVSAVVLGNRKGFGETAMPPHNMTMTIMGAGMLWVGWFGFNAGSALAANGDAG 250
Query: 123 AGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVAS 182
L +LS A + IE + AL +V + P + +
Sbjct: 251 MAMLVTHLSAAAGTFTWLTIEWIKYGKPSALGAVTGMVAGLGTITPASGYVGP-GGALVI 309
Query: 183 GAVLNV 188
G +
Sbjct: 310 GLSAGI 315
>gi|116748759|ref|YP_845446.1| hypothetical protein Sfum_1320 [Syntrophobacter fumaroxidans MPOB]
gi|116697823|gb|ABK17011.1| hypothetical protein Sfum_1320 [Syntrophobacter fumaroxidans MPOB]
Length = 702
Score = 40.5 bits (93), Expect = 0.67, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 270 PGLHTSFDAYEAHTDTLA-----HGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLP 324
P +HT++ AY +H + + H SL + +L+ N L P+F+PHLP
Sbjct: 464 PDVHTAYSAYVSHEEDMRSRLAEHAGRSLKEWRRMFYLDSRLEPTRRNVLSSPYFRPHLP 523
Query: 325 E 325
+
Sbjct: 524 D 524
>gi|159113851|ref|XP_001707151.1| Hypothetical protein GL50803_114336 [Giardia lamblia ATCC 50803]
gi|157435254|gb|EDO79477.1| hypothetical protein GL50803_114336 [Giardia lamblia ATCC 50803]
Length = 272
Score = 40.1 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 47/134 (35%), Gaps = 6/134 (4%)
Query: 103 FIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHT 162
F P L L AL+ P+ S+ +D A+ + + +V
Sbjct: 41 FDPIGLGDLG--ALEVTPVTFDPKIPGFILDTIRSLCPCALSIDDAAEGAMTFEQQVV-- 96
Query: 163 SALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMA-QHYRIFDMES 221
+ IA A A RG + + GY +A H+ + D+E+
Sbjct: 97 -GMDVSAKIARLDALGQEARKASACSVCSRCRRGTLASFVSAGGYDALALGHHLLDDLET 155
Query: 222 LITDGLIGAFFGGM 235
L G+ GA F G+
Sbjct: 156 LAITGVHGASFFGL 169
>gi|254513039|ref|ZP_05125105.1| betaine aldehyde dehydrogenase [Rhodobacteraceae bacterium KLH11]
gi|221533038|gb|EEE36033.1| betaine aldehyde dehydrogenase [Rhodobacteraceae bacterium KLH11]
Length = 486
Score = 40.1 bits (92), Expect = 0.80, Method: Composition-based stats.
Identities = 47/304 (15%), Positives = 83/304 (27%), Gaps = 23/304 (7%)
Query: 7 SDEDIRDNIKEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQPNYYRG 66
+D IRD + + Q P D + + ++L+ E +
Sbjct: 42 ADAAIRDADRAFRQGPWADLDPSGRADMLDALATQLETRWEELIE--AEIRDNGKRITEV 99
Query: 67 SRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLA---- 122
G H L P A+AG P + + ++PL
Sbjct: 100 RGQFSALHGWYRHFAAQARKLTPVPQDNAIAGVTSVGHWMPYGVVVAITPWNSPLMILAW 159
Query: 123 --AGALYAYLSHKAESSIHHQIEGVDK-ETADALAW-------REAIVHTSALLAPGAIA 172
A AL A + + S ++ + A H
Sbjct: 160 KLAPALAAGNTVVVKPSEMASASTLEFAQLAHEAGLPPGVLNVVTGFGHEVGEALVRHPL 219
Query: 173 SQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFF 232
++ + T + V +R LE G D E+ +G++ F
Sbjct: 220 TRKVTFTGSDAGGRKVAMAASDR-VIPTTLELGGKSPQIVFADC-DPET-TVNGVLSGIF 276
Query: 233 GGMHSKQVQNMSLRLVNDLKEG----ITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAH 288
V L + + +K+ +TER P H A E H +
Sbjct: 277 LSNGQTCVAGSRLIVEHSIKDAFVARLTERARSLKVGDPMDPATHIGPLANEPHLRKVIA 336
Query: 289 GVDS 292
++
Sbjct: 337 MIEQ 340
>gi|167757768|ref|ZP_02429895.1| hypothetical protein CLOSCI_00099 [Clostridium scindens ATCC 35704]
gi|167664650|gb|EDS08780.1| hypothetical protein CLOSCI_00099 [Clostridium scindens ATCC 35704]
Length = 702
Score = 40.1 bits (92), Expect = 0.81, Method: Composition-based stats.
Identities = 47/237 (19%), Positives = 89/237 (37%), Gaps = 26/237 (10%)
Query: 244 SLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHG-------------V 290
+ R++ + T + K K+ + + + TD
Sbjct: 82 TERVMEHIDAAHTRKASKKAVRKAQAEATAQTKSSRLQFTDEERAAPELEKYIKKSDKAA 141
Query: 291 DSLVRGEYPHFDQEKL--QTIADNTLEDPHFKPHLPEPEPLPQYKE-HSDRQKPSEPLAE 347
D L + + ++KL + D + H E + P +KE H+ +P++
Sbjct: 142 DRLDKAKAAIPKEKKLTKERTFDEATGKGKTRLHFEEKDKPPGFKEKHNPLSRPTQEAGI 201
Query: 348 HPHPKRKEVERELSEIEGA-KKESSARKFFDEGSPDHSPFKGERNQKLDPMRGADFTDA- 405
H K VE++ S +EGA K E +A + G+ +G R+ KL P R A +
Sbjct: 202 FVHNKIHSVEKDNSGVEGAHKTEEAAERGVKYGARKIK--QGYRSHKLKPYREAAKAEKA 259
Query: 406 ---PHAKFDATTFTESLPHVDEQTMHRF---SELKERHPVEAREVLEGLQEKLQGTK 456
+ F P + + RF ++K ++ EAR +G++ + T+
Sbjct: 260 AFQANVDFQYHKTLHDNPQLTSTPLSRFWQKQKIKRQYAKEARTTAKGIKGAAERTR 316
>gi|312109421|ref|YP_003987737.1| S-layer domain-containing protein [Geobacillus sp. Y4.1MC1]
gi|311214522|gb|ADP73126.1| S-layer domain-containing protein [Geobacillus sp. Y4.1MC1]
Length = 1047
Score = 40.1 bits (92), Expect = 0.84, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 52/165 (31%), Gaps = 15/165 (9%)
Query: 34 LGKEVINMPA--RSLDKLVAPFREETHDQP-NYYRGSRTDPHSVGTGAHLVEGLTSLAPY 90
+G V+N + L AP + + G+ D S L +L
Sbjct: 679 VGSPVVNGKDKTELIIPLTAPVAQTAKFYTVSVSAGTVKDLSSQQNS----NALATLTAD 734
Query: 91 IAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETA 150
++ A+ GK +T ++G+A A + + +A + GVD T
Sbjct: 735 VSAGAVTGK--DTAAPSITSISGVAAVKATSTGNQITFTIQDQANAGE--TASGVDFTTV 790
Query: 151 DALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVER 195
+ P + + + +PFG + +
Sbjct: 791 TDV----NNYRLDGAPLPSGSYVKVTGSDPSYTVTIQLPFGAISK 831
>gi|92109730|ref|YP_572016.1| protein of unknown function DUF395, YeeE/YedE [Nitrobacter
hamburgensis X14]
gi|91802812|gb|ABE65184.1| protein of unknown function DUF395, YeeE/YedE [Nitrobacter
hamburgensis X14]
Length = 151
Score = 40.1 bits (92), Expect = 0.84, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 6/92 (6%)
Query: 151 DALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKV------LED 204
++ ++ L+ I + + + + V G ++
Sbjct: 3 VLISLAAGLIFGLGLIISQMINPEKVLAFLDVAGDWDPSLAFVLAGAAAVSGLGYFFSRR 62
Query: 205 HGYPDMAQHYRIFDMESLITDGLIGAFFGGMH 236
P +A + I D L +IGA F G+
Sbjct: 63 RSAPLLAAQFDIPDRRDLDARLIIGAAFFGVG 94
>gi|115504195|ref|XP_001218890.1| hypothetical protein [Trypanosoma brucei TREU927]
gi|83642372|emb|CAJ16234.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 1443
Score = 40.1 bits (92), Expect = 0.88, Method: Composition-based stats.
Identities = 42/255 (16%), Positives = 72/255 (28%), Gaps = 30/255 (11%)
Query: 85 TSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEG 144
T+ + K++ L + A L S A +
Sbjct: 556 TTTTSDPSSDTTINKMVDPGTFSLAAVLPTAAIVPDFFGQCLVVRNSSSALREYYANAIR 615
Query: 145 VDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKV--- 201
DK L E + ++ I S S A SG + G V RG
Sbjct: 616 ADKGKILELMLLEYGAEWGSSISGDGITSSSAASFPISGTSSSTGLGAVSRGLRGTTRIA 675
Query: 202 ------LEDHGYPDMAQHYRIFDMESLITDG-----------LIGAFFGGMHSKQVQNMS 244
+ + +R L+ + ++GA G+ + V + +
Sbjct: 676 PVAQTPADRSQSSQINATFRHSHTRPLLPNSGSSVDRSRSPFVLGAETPGVATAGVASAA 735
Query: 245 LRLVNDLKEGITERLPYKHGVKSSSP--GLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFD 302
R L + +S+P L T+ + D L D + E PH
Sbjct: 736 GRRHESLFPFLISL--ALQAQTTSTPRDNLPTTSAPAASSGDVLELAPDREKQQEEPH-- 791
Query: 303 QEKLQTIADNTLEDP 317
+T A + + P
Sbjct: 792 ----RTTASHVITAP 802
>gi|159116221|ref|XP_001708332.1| Hypothetical protein GL50803_115232 [Giardia lamblia ATCC 50803]
gi|157436443|gb|EDO80658.1| hypothetical protein GL50803_115232 [Giardia lamblia ATCC 50803]
Length = 552
Score = 40.1 bits (92), Expect = 0.89, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 6/132 (4%)
Query: 105 PTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSA 164
P L L AL+ P+ S+ +D A+ + + +V
Sbjct: 323 PIGLGDLG--ALEVTPVTFDPKIPGFILDTIRSLCPCALSIDDAAEGAMTFEQQVV---G 377
Query: 165 LLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMA-QHYRIFDMESLI 223
+ IA + A A RG + + GY +A H+ + D+E+L
Sbjct: 378 MDVSAKIARLDASGQEARKASACSVCSRCRRGTLASFVSAGGYDALALGHHLLDDLETLA 437
Query: 224 TDGLIGAFFGGM 235
G+ GA F G+
Sbjct: 438 ITGVHGASFFGL 449
>gi|240146330|ref|ZP_04744931.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
gi|257201544|gb|EEU99828.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
Length = 375
Score = 40.1 bits (92), Expect = 0.90, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 66/205 (32%), Gaps = 23/205 (11%)
Query: 95 ALAGKLLSFIPTPLTRLAGLALQSAPLAA--GALYAYLSHKAESSIHHQIEGVDKETADA 152
A +S + + +A AL A + A ++ + + ++ E + ++ A A
Sbjct: 21 GAACIAMSLLLPGIGTIAAGALMGAGIGAVSASVAGAVGDYSSGNVRSAEEAI-RDVAIA 79
Query: 153 LAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQ 212
A AI + PG ++ VER + + D +
Sbjct: 80 -AISGAITGAIGVKFPG--------MNRLVEGGVDTTVATVERAAYAALDGDMTLEEKLA 130
Query: 213 HYRIFDMESLITDGLIGAFFG----GMHSK---QVQNMSLRLVNDLKEGITERLPYKHGV 265
+ IFD + D + G F G G+ K +N +N+L K
Sbjct: 131 Y--IFDPGQMAVDFVTGVFIGEAVDGIAKKLPGGWKNRGGSELNNLDAQGISSKSAKGSD 188
Query: 266 KSSSPG-LHTSFDAYEAHTDTLAHG 289
G L + +D L H
Sbjct: 189 TFKQNGNLPNGVRTEISGSD-LRHS 212
>gi|225378270|ref|ZP_03755491.1| hypothetical protein ROSEINA2194_03931 [Roseburia inulinivorans DSM
16841]
gi|225209933|gb|EEG92287.1| hypothetical protein ROSEINA2194_03931 [Roseburia inulinivorans DSM
16841]
gi|291535807|emb|CBL08919.1| Phage late control gene D protein (GPD) [Roseburia intestinalis
M50/1]
Length = 852
Score = 40.1 bits (92), Expect = 0.90, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 66/205 (32%), Gaps = 23/205 (11%)
Query: 95 ALAGKLLSFIPTPLTRLAGLALQSAPLAA--GALYAYLSHKAESSIHHQIEGVDKETADA 152
A +S + + +A AL A + A ++ + + ++ E + ++ A A
Sbjct: 498 GAACIAMSLLLPGIGTIAAGALMGAGIGAVSASVAGAVGDYSSGNVRSAEEAI-RDVAIA 556
Query: 153 LAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQ 212
A AI + PG ++ VER + + D +
Sbjct: 557 -AISGAITGAIGVKFPG--------MNRLVEGGVDTTVATVERAAYAALDGDMTLEEKLA 607
Query: 213 HYRIFDMESLITDGLIGAFFG----GMHSK---QVQNMSLRLVNDLKEGITERLPYKHGV 265
+ IFD + D + G F G G+ K +N +N+L K
Sbjct: 608 Y--IFDPGQMAVDFVTGVFIGEAVDGIAKKLPGGWKNRGGSELNNLDAQGISSKSAKGSD 665
Query: 266 KSSSPG-LHTSFDAYEAHTDTLAHG 289
G L + +D L H
Sbjct: 666 TFKQNGNLPNGVRTEISGSD-LRHS 689
>gi|254489013|ref|ZP_05102218.1| conserved hypothetical protein [Roseobacter sp. GAI101]
gi|214045882|gb|EEB86520.1| conserved hypothetical protein [Roseobacter sp. GAI101]
Length = 936
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 50/165 (30%), Gaps = 9/165 (5%)
Query: 68 RTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALY 127
R T L A + G S + + + R A LA GA++
Sbjct: 68 REYEKLERTLVDLRRAQERWNRAAAASRRVGSTFSNMASGIGRNVRQIAIGASLAGGAIF 127
Query: 128 AYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLN 187
+ A+ + +TAD L ++ A + + + N
Sbjct: 128 GIANSTADLGDNVA------KTADKLGIGLGVLQELRYAAERSGVATATFDGALEKMTKN 181
Query: 188 VPFGMVERGWSSKVLEDHGY--PDMAQHYRIFDMESLITDGLIGA 230
+ M G L+ G D+A D ++I D L G
Sbjct: 182 IGLAMEGTGAQKDALDALGLSAADLASKLPE-DALAMIADRLQGV 225
>gi|271501409|ref|YP_003334434.1| outer membrane autotransporter barrel domain-containing protein
[Dickeya dadantii Ech586]
gi|270344964|gb|ACZ77729.1| outer membrane autotransporter barrel domain protein [Dickeya
dadantii Ech586]
Length = 1075
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 35/266 (13%), Positives = 73/266 (27%), Gaps = 18/266 (6%)
Query: 16 KEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQPNYYRGSRTDPHSVG 75
++W Q + G + ++ A++ +V E P+ +
Sbjct: 188 EQWVQSGGSTTGTVISAGGYQ-LVKNGAQASGTVVNTGAE---GGPDAENSDGMFVSGIA 243
Query: 76 TGAHLVEGLTSLAPYIAG-AALAGK------LLSFIPTPLTRLAGLALQSAPLAAGALYA 128
T + G + + + + + + LA G
Sbjct: 244 TDTLIHAGGRQIVAAGGSSTGTTIQAGGDQSVHGQAQSTTLDGGNQYVHAGALATGTTVN 303
Query: 129 YLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVA---SGAV 185
+ L+ ++ L G S A TV+ S
Sbjct: 304 A-GGWQVVQQSGTADATTVNRDGKLSVSAGGTASNVTLNAGGALVTSTAATVSGINSLGG 362
Query: 186 LNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSL 245
NV ++ +LE+ G D+ D ++ G++ GG+ V N
Sbjct: 363 FNV--DAATASATNVLLENGGRLDVLSGGSA-DTTTVSNGGVLAVATGGVAQHIVMNEGG 419
Query: 246 RLVNDLKEGITERLPYKHGVKSSSPG 271
L+ D ++ ++ G
Sbjct: 420 VLIADSGSTVSGTNTAGTFGIDAATG 445
>gi|291222913|ref|XP_002731460.1| PREDICTED: protein kinase D1-like [Saccoglossus kowalevskii]
Length = 822
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 152 ALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMA 211
A W +AI + P + AS + ++ +++ E + D++
Sbjct: 462 AKGWEKAIRAALMPVTP--------QPSEASATTPALHVDKAQQ-AAAEKCEFIKHEDIS 512
Query: 212 QHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLK 252
QHY+IF E ++ G G +GG+H K + +++++++ L+
Sbjct: 513 QHYQIFPDE-ILGSGQFGIVYGGVHRKSGRQVAIKVIDKLR 552
>gi|296165610|ref|ZP_06848133.1| possible (R)-6-hydroxynicotine oxidase [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295899026|gb|EFG78509.1| possible (R)-6-hydroxynicotine oxidase [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 472
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 42/139 (30%), Gaps = 14/139 (10%)
Query: 65 RGSRTDPHSVGTGAHLVEGLTSLA-PYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAA 123
R S P ++ + + ++ G LA R G + + +
Sbjct: 34 RMSEQQPSAIARALDADDVIAAVRFAAEHGRGLA-----------IRAGGHGVDGSAMPD 82
Query: 124 GALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASG 183
AL LS E S+ V L + + L+ P S + + G
Sbjct: 83 DALVVDLSEFKEISVEPGSRRVRLGAGVLLGEMDGALAEYGLVVPAGTVSTTGVAGLTIG 142
Query: 184 AVLNVPFGMVERGWSSKVL 202
V + M RG + L
Sbjct: 143 GG--VGYNMRARGATVDSL 159
>gi|291337005|gb|ADD96528.1| hypothetical protein [uncultured organism MedDCM-OCT-S11-C29]
Length = 3493
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 60/165 (36%), Gaps = 5/165 (3%)
Query: 118 SAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSAL---LAPGAIAS- 173
LA ++ ++ + A + + LAPG ++
Sbjct: 1 GGALADAERAYKAQGFSDEEAFNKAQAPALAQGLGTALITRGFGKTGVESILAPGMKSTF 60
Query: 174 QSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDM-ESLITDGLIGAFF 232
+++K V GA + ++ W S V + P++ +M E+ + G++G
Sbjct: 61 VNVSKAVVKGAGMEATEEWYDQLWQSVVRKMSYQPELTFEQAFGEMAEAGVIGGILGGAV 120
Query: 233 GGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFD 277
G+ + + + S L + + ITER +S PG +
Sbjct: 121 SGVKAVEGEVKSKMLDRQMDKEITERGRAIALQESLPPGFAGEPE 165
>gi|261326093|emb|CBH08919.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 1443
Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 40/253 (15%), Positives = 68/253 (26%), Gaps = 26/253 (10%)
Query: 85 TSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEG 144
T+ + K++ L + A L S A +
Sbjct: 556 TTTTSDPSSDTTINKMVDPGTFSLAAVLPTAAIVPDFFGQCLVVRNSSSALREYYANAIR 615
Query: 145 VDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKV--- 201
DK L E + ++ I S S A SG + G V RG
Sbjct: 616 ADKGKILELMLLEYGAEWGSSISGDGITSSSAASFPISGTSSSTGLGAVSRGLRGTTRIA 675
Query: 202 ------LEDHGYPDMAQHYRIFDMESLITDG-----------LIGAFFGGMHSKQVQNMS 244
+ + R L+ + ++GA G+ + V + +
Sbjct: 676 PVAQTPADRSQSSQINATLRHSHTRPLLPNSGSSVDRSRSPFVLGAETPGVATAGVASAA 735
Query: 245 LRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQE 304
R L + + L T+ + D L D + E PH
Sbjct: 736 GRRHESLFPFLISLASQAQTTSTPRDNLPTTSAPAASSGDVLELAPDREKQQEEPH---- 791
Query: 305 KLQTIADNTLEDP 317
+T A + + P
Sbjct: 792 --RTTASHVITAP 802
>gi|148244422|ref|YP_001219116.1| ammonium transporter [Candidatus Vesicomyosocius okutanii HA]
gi|146326249|dbj|BAF61392.1| ammonium transporter [Candidatus Vesicomyosocius okutanii HA]
Length = 431
Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 25/96 (26%)
Query: 85 TSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEG 144
+ P+ + G + ++ A L ++S + E
Sbjct: 211 RPIPPHNMTMTITGAAMLWVGWFGFNGGSALAVGGNAAMAILVTHISAATGAITWMFYEW 270
Query: 145 VDKETADALAWREAIVHTSALLAPGAIASQSIAKTV 180
+ AL +V + P + + V
Sbjct: 271 IKFGRPTALGTVTGMVAGLGTITPASGFVGPVGALV 306
>gi|172063894|ref|YP_001811545.1| outer membrane autotransporter [Burkholderia ambifaria MC40-6]
gi|171996411|gb|ACB67329.1| outer membrane autotransporter barrel domain protein [Burkholderia
ambifaria MC40-6]
Length = 2366
Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 40/142 (28%), Gaps = 1/142 (0%)
Query: 97 AGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWR 156
AG L+ T AG + L+ S+++ + + +
Sbjct: 1261 AGGSLASTGTVNLAGAGATFDLGGASGAQTIGALTGATGSTVNLGANALTLSGSGNNTFG 1320
Query: 157 EAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRI 216
+ + L +Q++ + G S L G ++A
Sbjct: 1321 -GAIGGTGSLTLAGAGTQTLTGANTYTGGTTINGGSTLALVSGGSLASTGTVNLAGTGAT 1379
Query: 217 FDMESLITDGLIGAFFGGMHSK 238
FD+ IGA G +
Sbjct: 1380 FDVSGAAGAETIGALSGAAGTT 1401
>gi|221196139|ref|ZP_03569186.1| putative esterase [Burkholderia multivorans CGD2M]
gi|221202812|ref|ZP_03575831.1| putative esterase [Burkholderia multivorans CGD2]
gi|221176746|gb|EEE09174.1| putative esterase [Burkholderia multivorans CGD2]
gi|221182693|gb|EEE15093.1| putative esterase [Burkholderia multivorans CGD2M]
Length = 307
Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 14/80 (17%)
Query: 152 ALAWREAIVHTS-----ALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDH- 205
ALA + + A AP A+ SIA ASGA LN +V R + S L+
Sbjct: 9 ALALIAGSIAAARATPVASTAPSGAAASSIATPAASGATLNPGSSIVLRTFRSASLQRDW 68
Query: 206 --------GYPDMAQHYRIF 217
GY Y +
Sbjct: 69 SYTVYLPPGYNAEGARYPVM 88
>gi|221505772|gb|EEE31417.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 2520
Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 52/141 (36%), Gaps = 8/141 (5%)
Query: 97 AGKLLSFIPTPLTR-----LAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETAD 151
AG +++F P LA S P++ G H A ++ +
Sbjct: 207 AGGIVTFAPPDFFPATVSGLAASTSMSWPVSVGISAGGRGHAATTAFAAPPGAAAYPLSH 266
Query: 152 ALAWREAIVH--TSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPD 209
A +V+ T+ ++ PG + + A GA ++P G +S + G
Sbjct: 267 ARIPGGDLVYYLTAGVVLPGGAGA-GVVPAGALGAGTSLPPGATFLSHASAGENNGGAMV 325
Query: 210 MAQHYRIFDMESLITDGLIGA 230
AQ+ R+ D +L GA
Sbjct: 326 SAQNARVGDHVALAGKAKQGA 346
>gi|221484245|gb|EEE22541.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 2520
Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 52/141 (36%), Gaps = 8/141 (5%)
Query: 97 AGKLLSFIPTPLTR-----LAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETAD 151
AG +++F P LA S P++ G H A ++ +
Sbjct: 207 AGGIVTFAPPDFFPATVSGLAASTSMSWPVSVGISAGGRGHAATTAFAAPPGAAAYPLSH 266
Query: 152 ALAWREAIVH--TSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPD 209
A +V+ T+ ++ PG + + A GA ++P G +S + G
Sbjct: 267 ARIPGGDLVYYLTAGVVLPGGAGA-GVVPAGALGAGTSLPPGATFLSHASAGENNGGAMV 325
Query: 210 MAQHYRIFDMESLITDGLIGA 230
AQ+ R+ D +L GA
Sbjct: 326 SAQNARVGDHVALAGKAKQGA 346
>gi|161525705|ref|YP_001580717.1| hypothetical protein Bmul_2536 [Burkholderia multivorans ATCC
17616]
gi|189349573|ref|YP_001945201.1| collagen alpha chain precursor [Burkholderia multivorans ATCC
17616]
gi|160343134|gb|ABX16220.1| hypothetical protein Bmul_2536 [Burkholderia multivorans ATCC
17616]
gi|189333595|dbj|BAG42665.1| collagen alpha chain precursor [Burkholderia multivorans ATCC
17616]
Length = 1860
Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 41/246 (16%), Positives = 73/246 (29%), Gaps = 22/246 (8%)
Query: 32 TGLGKEVINMPARSLDKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYI 91
TG V+N +++ +VA DQ S +VGT + G
Sbjct: 373 TGALNGVVNTATNTVNTIVAAHGAL--DQAVLDLASNGLNGAVGTVTGALGGNNPTGALN 430
Query: 92 AGAALAGKLLSFIPTPLTRLAGL-ALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETA 150
L P L G+ + + L L+ ++ + G + T
Sbjct: 431 GVIGTVTGALGGANNPTGALNGVVSTVTGALGGNDPAGALNGVVG-TVTGALGGANNPTG 489
Query: 151 DALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDM 210
+ P + + + N P G + G S V G D
Sbjct: 490 ALNGVVGTVTGALGGNDPAGALNGVVGTVTGALGGANNPTGALN-GVVSTVTGALGGNDP 548
Query: 211 AQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRL---VNDLKEGITERLP--YKHGV 265
A +G++G G + N + L V+ + + P +GV
Sbjct: 549 AG----------ALNGVVGTVTGALGGAN--NPTGALNGVVSTVTGALGGNGPTGALNGV 596
Query: 266 KSSSPG 271
+++ G
Sbjct: 597 VTTAQG 602
>gi|39974363|ref|XP_368572.1| hypothetical protein MGG_00672 [Magnaporthe oryzae 70-15]
gi|145018413|gb|EDK02692.1| hypothetical protein MGG_00672 [Magnaporthe oryzae 70-15]
Length = 740
Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 5/83 (6%)
Query: 156 REAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLED-HGYPDMAQHY 214
+ + P S + ASG N G + S+ +L GY A Y
Sbjct: 655 SHGLTASLIEPTPAPANSGGLTPLGASGLSGNSNNGGTQN--SAALLTTLGGYDANATAY 712
Query: 215 RIFDMESLITDGLI--GAFFGGM 235
FD + + D L+ G FGG+
Sbjct: 713 DFFDPQHWMLDNLVDFGYSFGGV 735
>gi|317507692|ref|ZP_07965399.1| mechanosensitive ion channel [Segniliparus rugosus ATCC BAA-974]
gi|316254019|gb|EFV13382.1| mechanosensitive ion channel [Segniliparus rugosus ATCC BAA-974]
Length = 327
Score = 39.0 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 63/207 (30%), Gaps = 20/207 (9%)
Query: 121 LAAGALYAYLSHKAESSIHHQIEGVDKETADALAWR---EAIVHTSALLAPGAIASQSIA 177
+ A A E + E + A+ I A+L I+
Sbjct: 52 VKASANVIARGSFKEQEPQIRGEAARQRATLLSAFIWVFTVIQIFVAVLMIATALELPIS 111
Query: 178 KTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMA-QHYRIFDMESLITDGLIGAFFGGMH 236
AV G + VL G+ +A + YRI D+ L G G +
Sbjct: 112 GFAPLAAVAGAGLGFGAQRIVQDVL--SGFFIIAEKQYRIGDLVQLAVLGTTNDPIGTVE 169
Query: 237 SKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRG 296
++ LR + E +G S L + A +++R
Sbjct: 170 QVTLRVTKLRSTDG------ELYTVPNGQIIKSTNLSKDWAQAVVDIPVPASSDIAVLR- 222
Query: 297 EYPHFDQEKLQTIADNTLEDPHFKPHL 323
EKL + D +DP+ KP L
Sbjct: 223 -------EKLTEVCDTAKDDPNLKPLL 242
>gi|85094267|ref|XP_959849.1| hypothetical protein NCU05858 [Neurospora crassa OR74A]
gi|28921305|gb|EAA30613.1| hypothetical protein NCU05858 [Neurospora crassa OR74A]
Length = 1134
Score = 39.0 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 13/132 (9%)
Query: 12 RDNIKEWAQRPRVSPDI---KWHTGLGKEVINMPARSLDKLVAPFRE---------ETHD 59
RD++ +WA RP P K H G + N + ++ + +++
Sbjct: 695 RDHLFDWA-RPTRQPKPHQVKTHAGAQHVLDNDKEGTSGAYMSSWHAGLESLLGKPLSNN 753
Query: 60 QPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSA 119
P+ + R D H A + + + A LAG+ + L L
Sbjct: 754 NPDAHDSQRRDIHEQLYSAEWADQVKAFFAQTTDALLAGESYNVGGHLLVDLVRDVGNIV 813
Query: 120 PLAAGALYAYLS 131
P A +S
Sbjct: 814 PTLFAAKVFGIS 825
>gi|257414269|ref|ZP_05591966.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
gi|257200595|gb|EEU98879.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
Length = 401
Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 11/144 (7%)
Query: 322 HLPEPEPLPQYKE-HSDRQKPSEPLAEHPHPKRKEVERELSEIEGA-KKESSARKFFDEG 379
H E + P +KE HS +P++ H K VE++ S +EGA K E +A + G
Sbjct: 175 HFEEQDKPPGFKEKHSPLSRPAQEAGILVHNKIHSVEKDNSGVEGAHKSEETAERGLKYG 234
Query: 380 SPDHSPFKGERNQKLDPMR----GADFTDAPHAKFDATTFTESLPHVDEQTMHRF---SE 432
+ +G R+ KL P R + F P + + RF +
Sbjct: 235 ARKIK--QGYRSHKLKPYREAAKAEKAAFKANVDFQYHKTLHDNPQLTSNPISRFWQKQK 292
Query: 433 LKERHPVEAREVLEGLQEKLQGTK 456
+K ++ EAR +G++ + T+
Sbjct: 293 IKRQYAKEARNTAKGIKGAAERTR 316
>gi|261337975|ref|ZP_05965859.1| conserved hypothetical protein [Bifidobacterium gallicum DSM 20093]
gi|270277472|gb|EFA23326.1| conserved hypothetical protein [Bifidobacterium gallicum DSM 20093]
Length = 668
Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 37/119 (31%), Gaps = 10/119 (8%)
Query: 123 AGALYAYLSHKAESS--IHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTV 180
++ S + EGV++ T + +V + P +S A +
Sbjct: 57 GFTAVTKTQEFSKESQGDFLRYEGVEEGTRVDTSTPITVVESLGPGVPKGTVGKSEADAI 116
Query: 181 ASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDG-----LIGAFFGG 234
+ + VP E SSK G M D +L D ++G G
Sbjct: 117 TAVKDMGVPLSRAEVVVSSKTDVKPGDVAMTAP---ADGTALAKDDADRGIVLGVAAKG 172
>gi|237807961|ref|YP_002892401.1| sensor protein KdpD [Tolumonas auensis DSM 9187]
gi|237500222|gb|ACQ92815.1| Osmosensitive K channel His kinase sensor [Tolumonas auensis DSM
9187]
Length = 897
Score = 38.6 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 21/171 (12%)
Query: 13 DNIKEWAQRPRVSPDIKWHT--------GLGKE---VINMPARSLDKLVAPFREETHDQP 61
D + + Q R S + WHT G G ++ + AR +L + + P
Sbjct: 229 DRVDDQMQAYRHSGEPVWHTRDAILVCIGPGSGNEKLVRVAARLASRLGCVWHAVYVETP 288
Query: 62 NYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFI-PTPLTRLAGLALQSAP 120
+R + S+ + H + L + + A +L + L ++ Q P
Sbjct: 289 RLHRLPEQERRSILSTLHFAQELGAETSTLPAQDEADAILYYAREHNLGKILIGRHQKKP 348
Query: 121 LAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAI 171
Y ++ + +G D + H ++ L P I
Sbjct: 349 W-------YRWGQSRFAHRLGTKGPDLDLLIVSLTDTE--HAASTLLPADI 390
>gi|302541829|ref|ZP_07294171.1| PE-PGRS family protein [Streptomyces hygroscopicus ATCC 53653]
gi|302459447|gb|EFL22540.1| PE-PGRS family protein [Streptomyces himastatinicus ATCC 53653]
Length = 455
Score = 38.6 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 63/186 (33%), Gaps = 9/186 (4%)
Query: 9 EDIRDNIKEWAQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQPNYYRGSR 68
E IR + + +R ++ ++ LG + +PA L + D G
Sbjct: 239 ERIRLRLPDGTRR-ELTIGARFDRSLGFADLVVPAAVLRPHTP---DPLLDAVYLVTGPD 294
Query: 69 TDPHSVGTGAHLVEGLTSLAPY----IAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAG 124
P A L + S + A AG + P L A + LA
Sbjct: 295 HRPSLDRDLARLTKAWPSARAADRDQVQEAGAAGAVDETWPVYLFSALIAAFTALALANT 354
Query: 125 ALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSI-AKTVASG 183
+ A L E ++ I + +AW +V +L A+A + A ++A
Sbjct: 355 VVMATLVRTGEFAMLRLIGATRRNVLALVAWESLVVAGCGVLLGAAVAGIVLSATSLALT 414
Query: 184 AVLNVP 189
+++
Sbjct: 415 GGIHIS 420
>gi|227505988|ref|ZP_03936037.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
gi|227197422|gb|EEI77470.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
Length = 475
Score = 38.6 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 52/182 (28%), Gaps = 24/182 (13%)
Query: 30 WHTGLGKEVINMPARSLD---KLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTS 86
+H G+ K + + D +L A E G++ V+ +
Sbjct: 225 YHDGVYKA-VEGAKQLNDGTKQLDAKVDEALSGVKQLDDGAKKVDGMAKQNQSKVQEVQR 283
Query: 87 LAPYIAGAALAGKLLSFIPTPLTRLA---GLALQSA-----------PLAAGALYAYLSH 132
P G +LLS + L + G A A PL G + +
Sbjct: 284 ALPAPTGGVQDVQLLSPVVALLIAVVLTLGGACLGAFVVCSGRSPWLPLFGGVVVLAV-- 341
Query: 133 KAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGM 192
AE G A + LA + + + GA L V G+
Sbjct: 342 LAEIMFFLLATG----PTGEAALWVGLAAAVTSLASAGLTTALLRYFGKVGAGLAVVLGL 397
Query: 193 VE 194
+
Sbjct: 398 AQ 399
>gi|34498638|ref|NP_902853.1| long-chain fatty acid transport protein [Chromobacterium violaceum
ATCC 12472]
gi|34104491|gb|AAQ60849.1| long-chain fatty acid transport protein precursor [Chromobacterium
violaceum ATCC 12472]
Length = 445
Score = 38.6 bits (88), Expect = 2.6, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 42/129 (32%), Gaps = 10/129 (7%)
Query: 82 EGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYL----SHKAESS 137
+ +T + AGA +AG LS + L + G YA + S + S
Sbjct: 35 QSVTGMGRAYAGAGMAGDDLSAVFYN--PAGMTLLSGTRVQGGLTYAEIDAPFSGRNTSV 92
Query: 138 IHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGW 197
H G T A + + P + + + G + PFG+
Sbjct: 93 SHLP--GTPPATVTTSANDNG--RGAGEVIPNGYLTHQVNDQLFLGLGVTTPFGLGASYS 148
Query: 198 SSKVLEDHG 206
+ D+G
Sbjct: 149 DNWGGRDNG 157
>gi|145608240|ref|XP_360722.2| hypothetical protein MGG_03265 [Magnaporthe oryzae 70-15]
gi|145015734|gb|EDK00224.1| hypothetical protein MGG_03265 [Magnaporthe oryzae 70-15]
Length = 976
Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 55/182 (30%), Gaps = 13/182 (7%)
Query: 19 AQRPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQPNYYRGSRTDPHSVGTGA 78
RP SP + + + +PA + L P + + +DQ + R + G
Sbjct: 798 MIRPLNSPKVGFLQAVNSPKRPLPADDFEDLNPPKKIQRNDQREFQRAESPLKGAAGRRL 857
Query: 79 HLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRL-AGLALQSAPLAAGALYAYLSHKAESS 137
+ P A A + I L++L S L+A + L
Sbjct: 858 ENQRRIHGQGPASYNTAPAPAIPREINFLLSQLPGAEVYNSTRLSASRVVDTLR------ 911
Query: 138 IHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGW 197
H + ++ R+ S P S + G PFG R
Sbjct: 912 DTHVPDYQSWKSRQDKGLRQ-----SGAQMPSD-FSNPGYGRDSPGLRTGSPFGGERRIA 965
Query: 198 SS 199
S+
Sbjct: 966 SA 967
>gi|29840115|ref|NP_829221.1| hypothetical protein CCA00351 [Chlamydophila caviae GPIC]
gi|29834463|gb|AAP05099.1| conserved hypothetical protein [Chlamydophila caviae GPIC]
Length = 583
Score = 38.2 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 46/161 (28%), Gaps = 13/161 (8%)
Query: 108 LTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALL- 166
L RL + GA + + + T L + ++
Sbjct: 203 LIRLGNNIVSKLSKGGGAFSLKMQRLSSTMSKVH-------TGITLGLVVGGIAAVGVIA 255
Query: 167 --APGAIASQSIAKTVASGAVLNV-PFGMVERGWS--SKVLEDHGYPDMAQHYRIFDMES 221
PG I + + A G L V SK + D+ I D++
Sbjct: 256 AVIPGGIFALPMIIAAAIGIGLAVLGLSYAIEAILERSKTNKKQLLKDLKSTIDIQDLKD 315
Query: 222 LITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYK 262
+ D + + + Q M+L + +E R +
Sbjct: 316 MTLDQTVLMNMLKVSLQADQQMTLDHKDFYEEYNRIRDNLQ 356
>gi|332561007|ref|ZP_08415325.1| bacteriophge tail fiber protein [Rhodobacter sphaeroides WS8N]
gi|332274805|gb|EGJ20121.1| bacteriophge tail fiber protein [Rhodobacter sphaeroides WS8N]
Length = 532
Score = 38.2 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 41/113 (36%), Gaps = 3/113 (2%)
Query: 80 LVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAY---LSHKAES 136
L LTS + A A GK+L PL + +AP AA + ++
Sbjct: 81 LNNTLTSTSQAQALTAAQGKVLQDTKAPLASPGLTGVPTAPTAAAGTDTGQLATTAFVQN 140
Query: 137 SIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVP 189
I + + TA + A + A+ + +A +A A L+ P
Sbjct: 141 QIAASVPDATEATAGKVRLASAAQIAAGTAGALAVTAARLAPLLAEKAGLDSP 193
>gi|289767365|ref|ZP_06526743.1| FecCD-family membrane transporter [Streptomyces lividans TK24]
gi|289697564|gb|EFD64993.1| FecCD-family membrane transporter [Streptomyces lividans TK24]
Length = 368
Score = 38.2 bits (87), Expect = 3.2, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 45/124 (36%), Gaps = 9/124 (7%)
Query: 83 GLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQI 142
+T+ + A A + S + L L G S P+AAGA+ L H S+
Sbjct: 193 AVTTFMVFAAEHGEAAR--SAMMWLLGSLGGANWSSVPIAAGAVLGGLLHLGWSARRLNA 250
Query: 143 EGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASG-AVLNVP------FGMVER 195
+ ETA AL + L A+ +A + A G L VP G R
Sbjct: 251 LAMGDETAAALGVDPGRLRKELFLTASAVTGAVVAVSGAIGFVGLMVPHAARMLVGADHR 310
Query: 196 GWSS 199
+
Sbjct: 311 RLLA 314
>gi|256783487|ref|ZP_05521918.1| FecCD-family membrane transport protein [Streptomyces lividans
TK24]
Length = 336
Score = 38.2 bits (87), Expect = 3.2, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 45/124 (36%), Gaps = 9/124 (7%)
Query: 83 GLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQI 142
+T+ + A A + S + L L G S P+AAGA+ L H S+
Sbjct: 161 AVTTFMVFAAEHGEAAR--SAMMWLLGSLGGANWSSVPIAAGAVLGGLLHLGWSARRLNA 218
Query: 143 EGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASG-AVLNVP------FGMVER 195
+ ETA AL + L A+ +A + A G L VP G R
Sbjct: 219 LAMGDETAAALGVDPGRLRKELFLTASAVTGAVVAVSGAIGFVGLMVPHAARMLVGADHR 278
Query: 196 GWSS 199
+
Sbjct: 279 RLLA 282
>gi|254466410|ref|ZP_05079821.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
[Rhodobacterales bacterium Y4I]
gi|206687318|gb|EDZ47800.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
[Rhodobacterales bacterium Y4I]
Length = 911
Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 60/199 (30%), Gaps = 30/199 (15%)
Query: 42 PARSLDKLVAPFREETHDQPNYYRGSRTDPHS--VGTGAHLVEGLTSLAPYIAGAALAGK 99
P ++ + A F+ + +++ + + + G +HL + A+A +
Sbjct: 534 PEGEIEDMKAAFQAQLNEEFEAGKDYKPNKADWLDGRWSHLNK--KDADYQRGSTAIAPE 591
Query: 100 LLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAI 159
L+ I T L+R+ PL + G ET + W
Sbjct: 592 TLAEIGTALSRVPD----GFPL-----------HRTVARFLDARGKMFETGEGFDWATGE 636
Query: 160 VHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYP-----DMAQHY 214
L + + G F G + E+ YP Y
Sbjct: 637 AMAFGSLLLEGYPVRLAGQDATRGT-----FSQRHSGIVDQETEERYYPLNNIRAGQSQY 691
Query: 215 RIFDMESLITDGLIGAFFG 233
+ D +L ++G +G
Sbjct: 692 EVID-SALSEYAVLGFEYG 709
>gi|212715502|ref|ZP_03323630.1| hypothetical protein BIFCAT_00400 [Bifidobacterium catenulatum DSM
16992]
gi|212661584|gb|EEB22159.1| hypothetical protein BIFCAT_00400 [Bifidobacterium catenulatum DSM
16992]
Length = 521
Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 51/152 (33%), Gaps = 12/152 (7%)
Query: 265 VKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEYPHFDQEKLQTIADNTLEDPHFKPHLP 324
S+P D H +HG++ Q A N +ED F P +P
Sbjct: 377 DAPSAPAAPVIPDTPVVHQPEESHGINIAPDSSLAALAQMAQNIDAPNPVEDT-FTPRMP 435
Query: 325 EPEP--LPQYKEHSDR--QKPSEPLAEHPHPKRK-EVERELSEIEGAKKESSARKFFDEG 379
LPQ S P+ P + P P + + +E AK +K +E
Sbjct: 436 SLSTPNLPQVNTESINLGTLPTVPPSFTPEPATSADHSTTATPVESAKPTVEEKK--NET 493
Query: 380 SPDHSPFKGERNQKLDPMRGADFTDAPHAKFD 411
P +P G N LD D D FD
Sbjct: 494 KPATNPMFGPTNSNLD----VDIPDLSFPSFD 521
>gi|85707582|ref|ZP_01038648.1| phosphoenolpyruvate-protein phosphotransferase [Erythrobacter sp.
NAP1]
gi|85689116|gb|EAQ29119.1| phosphoenolpyruvate-protein phosphotransferase [Erythrobacter sp.
NAP1]
Length = 756
Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 12/125 (9%)
Query: 136 SSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVER 195
S + E VD+E A +L+ +++ T + L T+ G V R
Sbjct: 155 SELITNAELVDEEEALSLSPQQSGTQTLSGL------------TLVRGLGAGVAAYHQPR 202
Query: 196 GWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGI 255
++V+ D + + YR FD DGL G+ + + + + EG
Sbjct: 203 VQITQVMADDIEAERQRVYRAFDKMREQIDGLTNQADFGVGGEHEEVLETYKMFAYDEGW 262
Query: 256 TERLP 260
+ R+
Sbjct: 263 SRRIN 267
>gi|5880612|gb|AAD54768.1|AF120157_1 endo-1,4-beta-xylanase [Xylanimicrobium pachnodae]
Length = 1183
Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 45/138 (32%), Gaps = 4/138 (2%)
Query: 83 GLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQI 142
SL+P A + + R+ +A +A GAL + ++ +
Sbjct: 3 SRQSLSPGRVPGGPAPEHVGRTSRGWRRVIASGATAALIAGGALVGGALTSSAAAEPTVV 62
Query: 143 EGVDKETADALAWREAIVHTSALL-APGAIASQSIA--KTVASGAVLNVPFGMVERGWSS 199
VD E W ++ T A++ +P + A + P G+ G +
Sbjct: 63 SAVDFEDGTTGTWTQSGSPTLAVVESPDGADDGQVLSITRAADYEGIQSPTGIFTPGQTY 122
Query: 200 K-VLEDHGYPDMAQHYRI 216
+ D+A +
Sbjct: 123 DFTMRARLAADVAGTADV 140
>gi|115359112|ref|YP_776250.1| outer membrane autotransporter [Burkholderia ambifaria AMMD]
gi|115284400|gb|ABI89916.1| outer membrane autotransporter barrel domain protein [Burkholderia
ambifaria AMMD]
Length = 2371
Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 39/142 (27%), Gaps = 1/142 (0%)
Query: 97 AGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWR 156
AG L+ T AG + L S+++ + + +
Sbjct: 1266 AGGSLASTGTVNLAGAGATFDLGGASGAETIGALIGATGSTVNLGANALTLSGSGNNTFG 1325
Query: 157 EAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRI 216
+ + L +Q++ + G S L G ++A
Sbjct: 1326 -GAIGGTGSLTLAGAGTQTLTGANTYTGGTTINGGSTLALVSGGSLASTGTVNLAGTGAT 1384
Query: 217 FDMESLITDGLIGAFFGGMHSK 238
FD+ IGA G +
Sbjct: 1385 FDVSGAAGAETIGALSGAAGTN 1406
>gi|332967975|gb|EGK07062.1| xylulokinase [Desmospora sp. 8437]
Length = 511
Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 37/125 (29%), Gaps = 3/125 (2%)
Query: 99 KLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADAL---AW 155
K+L+ + +L G + L S + G+D E L +
Sbjct: 155 KVLNAKDYIVFKLTGAFVTDYSDGNSMGCFDLEDLKWSERILEASGIDPEKLPNLQPSTY 214
Query: 156 REAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYR 215
V A A G + G N+ G VE G + L +
Sbjct: 215 VAGGVTEEAAKATGMALGTKVVIGAGDGVTANIGAGSVEEGKTYCSLGTSAWVTTTAKKP 274
Query: 216 IFDME 220
IFD E
Sbjct: 275 IFDPE 279
>gi|187918967|ref|YP_001887998.1| methylmalonate-semialdehyde dehydrogenase [Burkholderia
phytofirmans PsJN]
gi|187717405|gb|ACD18628.1| methylmalonate-semialdehyde dehydrogenase [Burkholderia
phytofirmans PsJN]
Length = 501
Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 8/78 (10%)
Query: 221 SLITDGLIGAFFGGMHSKQVQNMSLRLVNDLK----EGITERLPYKHGVKSSSPGLHTSF 276
++ TD LIGA FG + + V D+ + ER ++PG
Sbjct: 267 AMATDALIGAAFGSAGERCMAISVAVAVGDVGDRLVAALAERTRALKIDDGTAPGAEMGP 326
Query: 277 DAYEAHTDTLAHGVDSLV 294
T ++SL+
Sbjct: 327 ----VITAAARERIESLI 340
>gi|226303686|ref|YP_002763644.1| hypothetical protein RER_01970 [Rhodococcus erythropolis PR4]
gi|226182801|dbj|BAH30905.1| hypothetical protein RER_01970 [Rhodococcus erythropolis PR4]
Length = 1112
Score = 37.8 bits (86), Expect = 4.5, Method: Composition-based stats.
Identities = 44/243 (18%), Positives = 76/243 (31%), Gaps = 19/243 (7%)
Query: 44 RSLDKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSF 103
+ L P T + + ++VG+ G +P A +A
Sbjct: 319 ETTTSLSVPATAITGTAVDLTATVAPN-NAVGSVQFKSNGTAIGSPVAVSAGVA------ 371
Query: 104 IPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTS 163
+ AG +A AGA + S A++ VD ET +L+ + S
Sbjct: 372 TLSHSFDAAGAQSVTADFTAGAGFVSSSASAQTVTVSDPAPVDVETTTSLSVPATAITGS 431
Query: 164 ALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLI 223
A+ ++A A G V G S V +G ++ + +S+
Sbjct: 432 AVDLTA-----TVAPNNAVGTVQFKSNGAA---IGSPVTVSNGTATLSHAFDAAGAQSIT 483
Query: 224 TDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHT 283
D GA F S Q +++ + T L + G A A
Sbjct: 484 ADFTAGAGFVS-SSASAQTVTVSDPAPVDVETTTSLSVPATAIT---GTAVDLTATVAPN 539
Query: 284 DTL 286
+ +
Sbjct: 540 NAV 542
>gi|296128141|ref|YP_003635391.1| membrane protein-like protein [Cellulomonas flavigena DSM 20109]
gi|296019956|gb|ADG73192.1| membrane protein-like protein [Cellulomonas flavigena DSM 20109]
Length = 982
Score = 37.4 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 64/218 (29%), Gaps = 22/218 (10%)
Query: 90 YIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKET 149
G A A L + +T L + +A+ + + + G+ T
Sbjct: 653 DQTGEAKAAGLREGL--AMTDGGLDLLTAGVVASVRAAVGVEGQTAEDETLRG-GIASLT 709
Query: 150 ADALAWREAI---VHTSALLAPGAIASQSIAKTVASGAVLNVPFGM------------VE 194
A V L+ GA + + ++ GA +
Sbjct: 710 AGVGELSTGGQALVDGLGELSAGAAELRDGSARLSVGAGTLADGAADLAAGTGRLAPGAQ 769
Query: 195 RGWSSKVLEDHGYPDMAQHYR-IFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKE 253
R + G +A R + + ++DG+ A G + + L +
Sbjct: 770 RLSAGLRDAADGSQTLADRLRPAAEGSAALSDGVRAAADGALTLADRLRPAADGSRALAD 829
Query: 254 GITERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVD 291
G R K SS G+ T+ D +D L D
Sbjct: 830 G--ARTAADGATKLSS-GIRTAADGSRELSDGLRDAAD 864
>gi|271967415|ref|YP_003341611.1| signal transduction histidine kinase-like protein
[Streptosporangium roseum DSM 43021]
gi|270510590|gb|ACZ88868.1| Signal transduction histidine kinase-like protein
[Streptosporangium roseum DSM 43021]
Length = 403
Score = 37.4 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 48/165 (29%), Gaps = 28/165 (16%)
Query: 152 ALAWREAIVHTSALLAPGAIASQSIAKTVASG---------------AVLNVPFGMVERG 196
AL W + + PG + + + A + R
Sbjct: 125 ALWWVDLGAIGVGGVLPGVLLTAPLQPDTPLSLSLPLALAGAVIMPTAAYPITAWAGARA 184
Query: 197 WSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGIT 256
++ L P++A + + + D + ++++ +T
Sbjct: 185 TMARALLGSPDPELA---EVVRSRARLVDA------FEIERRRIERDLHDGAQQRLVALT 235
Query: 257 ERLPYKHGVKSSSPGLHTSFDAYEAHTDTLAHGVD--SLVRGEYP 299
+L PG + EAH + + + L+RG +P
Sbjct: 236 LKLGM--AQLDLEPGSPAAERVAEAHEEAMRALAELRELIRGVHP 278
>gi|110679794|ref|YP_682801.1| flagellar motor switch protein FliG, putative [Roseobacter
denitrificans OCh 114]
gi|109455910|gb|ABG32115.1| flagellar motor switch protein FliG, putative [Roseobacter
denitrificans OCh 114]
Length = 352
Score = 37.4 bits (85), Expect = 5.1, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 192 MVER--GWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQ---VQNMSLR 246
MV R + + + D+ + R D E+L+T L GA GM + ++NMS R
Sbjct: 244 MVRRAIFTFANIPQRIAARDIPRVVRALDQEALVT-ALAGAEAAGMQASAEFILENMSGR 302
Query: 247 LVNDLKEGITERLPYKHGVKSSSPGLHT-SFDAYEAHTDTL 286
+ + L+E + ER K + L + EA D L
Sbjct: 303 MADQLREEVQERETVKSADMEEASALIVQAIRELEASGDLL 343
>gi|322499046|emb|CBZ34118.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 884
Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 10/131 (7%)
Query: 90 YIAGAALAGKL-LSFIPTPLTRLAGLALQSAPLAAGALYAYLS----HKAESSIHHQIEG 144
A A+ + LS + G A+ APL A A + A+ S +
Sbjct: 714 EAATQAIPEMVRLSVLHYTSRAAEGAAVDGAPLPATAEVTASQDDGRNVADRSPFSPADV 773
Query: 145 VDKETADALAWREAIVHT----SALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSK 200
+ AD + E + ++L+ P A+ + V ER
Sbjct: 774 TTADAADGKSVGEGRAASRHLKASLVRPTALTWNQV-DRVLVMLGTVTQLSEAERSLFRA 832
Query: 201 VLEDHGYPDMA 211
+L+D G ++
Sbjct: 833 LLDDDGSDSLS 843
>gi|146086661|ref|XP_001465607.1| hypothetical protein [Leishmania infantum JPCM5]
gi|134069706|emb|CAM68030.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 884
Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 10/131 (7%)
Query: 90 YIAGAALAGKL-LSFIPTPLTRLAGLALQSAPLAAGALYAYLS----HKAESSIHHQIEG 144
A A+ + LS + G A+ APL A A + A+ S +
Sbjct: 714 EAATQAIPEMVRLSVLHYTSRAAEGAAVDGAPLPATAEVTASQDDGRNVADRSPFSPADV 773
Query: 145 VDKETADALAWREAIVHT----SALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSK 200
+ AD + E + ++L+ P A+ + V ER
Sbjct: 774 TTADAADGKSVGEGRAASRHLKASLVRPTALTWNQV-DRVLVMLGTVTQLSEAERSLFRA 832
Query: 201 VLEDHGYPDMA 211
+L+D G ++
Sbjct: 833 LLDDDGSDSLS 843
>gi|21225493|ref|NP_631272.1| FecCD-family membrane transport protein [Streptomyces coelicolor
A3(2)]
gi|8546927|emb|CAB94639.1| putative FecCD-family membrane transport protein [Streptomyces
coelicolor A3(2)]
Length = 368
Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 45/124 (36%), Gaps = 9/124 (7%)
Query: 83 GLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQI 142
+T+ + A A + S + L L G S P+AAGA+ + H S+
Sbjct: 193 AVTTFMVFAAEHGEAAR--SAMMWLLGSLGGANWSSVPIAAGAVLGGILHLGWSARRLNA 250
Query: 143 EGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASG-AVLNVP------FGMVER 195
+ ETA AL + L A+ +A + A G L VP G R
Sbjct: 251 LAMGDETAAALGVDPGRLRKELFLTASAVTGAVVAVSGAIGFVGLMVPHAARMLVGADHR 310
Query: 196 GWSS 199
+
Sbjct: 311 RLLA 314
>gi|228909190|ref|ZP_04073018.1| Transketolase [Bacillus thuringiensis IBL 200]
gi|228850511|gb|EEM95337.1| Transketolase [Bacillus thuringiensis IBL 200]
Length = 673
Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 12/119 (10%)
Query: 150 ADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLN----VPFGMVERGWSSKVLEDH 205
A + I + + A + K S N V G + G + + +
Sbjct: 122 ATTGPLGQGIANAVGMAMAEAHLAAKFNKDGHSIIDHNTYALVGDGDLMEGVAYEAMSMA 181
Query: 206 GYPDMAQHYRIFDMESLITDGLIGAFFG--------GMHSKQVQNMSLRLVNDLKEGIT 256
G+ + + ++D + DG +G F +H + V+ V+ + + IT
Sbjct: 182 GHMKLGKLIVLYDSNEISLDGELGIAFSEDIQKRAESVHWQYVRVEDGNDVDAITKAIT 240
>gi|218234257|ref|YP_002368092.1| transketolase [Bacillus cereus B4264]
gi|218162214|gb|ACK62206.1| transketolase [Bacillus cereus B4264]
Length = 664
Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 12/119 (10%)
Query: 150 ADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLN----VPFGMVERGWSSKVLEDH 205
A + I + + A + K S N V G + G + + +
Sbjct: 113 ATTGPLGQGIANAVGMAMAEAHLAAKFNKDGHSIIDHNTYALVGDGDLMEGVAYEAMSMA 172
Query: 206 GYPDMAQHYRIFDMESLITDGLIGAFFG--------GMHSKQVQNMSLRLVNDLKEGIT 256
G+ + + ++D + DG +G F +H + V+ V+ + + IT
Sbjct: 173 GHMKLGKLIVLYDSNEISLDGELGIAFSEDIEKRAESVHWQYVRVEDGNDVDAITKAIT 231
>gi|229151569|ref|ZP_04279771.1| Transketolase [Bacillus cereus m1550]
gi|228631813|gb|EEK88440.1| Transketolase [Bacillus cereus m1550]
Length = 664
Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 12/119 (10%)
Query: 150 ADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLN----VPFGMVERGWSSKVLEDH 205
A + I + + A + K S N V G + G + + +
Sbjct: 113 ATTGPLGQGIANAVGMAMAEAHLAAKFNKDGHSIIDHNTYALVGDGDLMEGVAYEAMSMA 172
Query: 206 GYPDMAQHYRIFDMESLITDGLIGAFFG--------GMHSKQVQNMSLRLVNDLKEGIT 256
G+ + + ++D + DG +G F +H + V+ V+ + + IT
Sbjct: 173 GHMKLGKLIVLYDSNEISLDGELGIAFSEDIQKRAESVHWQYVRVEDGNDVDAITKAIT 231
>gi|72388488|ref|XP_844668.1| nucleoporin (NUP54/57) [Trypanosoma brucei TREU927]
gi|62360145|gb|AAX80565.1| nucleoporin (NUP54/57), putative [Trypanosoma brucei]
gi|70801201|gb|AAZ11109.1| nucleoporin (NUP54/57), putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 641
Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 30/125 (24%), Gaps = 4/125 (3%)
Query: 88 APYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDK 147
AP + A G + T + AGA A + G
Sbjct: 18 APACSTAGGFGSGFNTATTGGFGAGANTATTGGFGAGANTATTGGFGAGANTVTTGG--F 75
Query: 148 ETADALAWREAIVHTSALLAPGAIAS-QSIAKTVASGAVLNVPFGMVERGWSSKVLEDHG 206
A + + G + + A T GA N G + G
Sbjct: 76 GAGANTATTGGFGAGANTVTTGGFGAGANTATTGGFGAGANTAT-TGGFGAGANTATTGG 134
Query: 207 YPDMA 211
+ A
Sbjct: 135 FGAGA 139
>gi|228901875|ref|ZP_04066044.1| Transketolase [Bacillus thuringiensis IBL 4222]
gi|228857765|gb|EEN02256.1| Transketolase [Bacillus thuringiensis IBL 4222]
Length = 673
Score = 37.4 bits (85), Expect = 5.8, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 12/119 (10%)
Query: 150 ADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLN----VPFGMVERGWSSKVLEDH 205
A + I + + A + K S N V G + G + + +
Sbjct: 122 ATTGPLGQGIANAVGMAMAEAHLAAKFNKDGHSIIDHNTYALVGDGDLMEGVAYEAMSMA 181
Query: 206 GYPDMAQHYRIFDMESLITDGLIGAFFG--------GMHSKQVQNMSLRLVNDLKEGIT 256
G+ + + ++D + DG +G F +H + V+ V+ + + IT
Sbjct: 182 GHMKLGKLIVLYDSNEISLDGELGIAFSEDIQKRAESVHWQYVRVEDGTDVDAITKAIT 240
>gi|228966278|ref|ZP_04127336.1| Transketolase [Bacillus thuringiensis serovar sotto str. T04001]
gi|228793411|gb|EEM40956.1| Transketolase [Bacillus thuringiensis serovar sotto str. T04001]
Length = 673
Score = 37.4 bits (85), Expect = 5.8, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 12/119 (10%)
Query: 150 ADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLN----VPFGMVERGWSSKVLEDH 205
A + I + + A + K S N V G + G + + +
Sbjct: 122 ATTGPLGQGIANAVGMAMAEAHLAAKFNKDGHSIIDHNTYALVGDGDLMEGVAYEAMSMA 181
Query: 206 GYPDMAQHYRIFDMESLITDGLIGAFFG--------GMHSKQVQNMSLRLVNDLKEGIT 256
G+ + + ++D + DG +G F +H + V+ V+ + + IT
Sbjct: 182 GHMKLGKLIVLYDSNEISLDGELGIAFSEDIQKRAESVHWQYVRVEDGTDVDAITKAIT 240
>gi|115377331|ref|ZP_01464538.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|115365651|gb|EAU64679.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
Length = 274
Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 44/127 (34%), Gaps = 15/127 (11%)
Query: 92 AGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETAD 151
G+ L+ L + + A + + GA L+ + + + V
Sbjct: 160 NGSGLSASLSTLFSNSPGLIGSAARWAGVVGNGASAV-LNGISAYQEAMRGDYV------ 212
Query: 152 ALAWREAIVHTSALLAPG-AIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDM 210
+ L+A G + + S+ A+ V V ++ GW + + Y +
Sbjct: 213 -------GAAGTGLMAVGSGVLAGSVFTGTAAPGVAVVGAALIGAGWVTNQFSEADYETI 265
Query: 211 AQHYRIF 217
A+ + ++
Sbjct: 266 ARQHGLY 272
>gi|237750952|ref|ZP_04581432.1| chaperonin GroEL [Helicobacter bilis ATCC 43879]
gi|229373397|gb|EEO23788.1| chaperonin GroEL [Helicobacter bilis ATCC 43879]
Length = 547
Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 36/94 (38%), Gaps = 5/94 (5%)
Query: 119 APLAAGALYAYLSHKAESSIHHQIEGVDKE-TADALAWREAIVHTSALLAPGAIASQSIA 177
A L+ G + +E + + + VD +A A E IV A S+ A
Sbjct: 369 AKLSGGVAVIKVGAPSEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIHAA-SKVNA 427
Query: 178 KTVASGAVLNVPFGMVERGW---SSKVLEDHGYP 208
K + N+ F ++ R +++ + GY
Sbjct: 428 KNASLKGDENIGFDIIHRAVKAPLAQIATNAGYD 461
>gi|260431300|ref|ZP_05785271.1| histidinol dehydrogenase [Silicibacter lacuscaerulensis ITI-1157]
gi|260415128|gb|EEX08387.1| histidinol dehydrogenase [Silicibacter lacuscaerulensis ITI-1157]
Length = 433
Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 37/123 (30%), Gaps = 3/123 (2%)
Query: 53 FREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLA 112
+ D P+ V A + L L + L+F +T+
Sbjct: 20 LSAKREDSPDVDAVVAQIIADVR--ARGDAAVIELTAKFDRLQLTPETLAFSADEVTQAI 77
Query: 113 GLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIA 172
A A + E + E D+ A L WR + V + L PG +A
Sbjct: 78 ATVSADDRAALELAAARIRAYHERQMPQDQEWTDESGA-TLGWRWSAVSAAGLYVPGGLA 136
Query: 173 SQS 175
S
Sbjct: 137 SYP 139
>gi|23573417|gb|AAN38708.1| hemolysin/hemagglutinin-like protein HecA [Erwinia chrysanthemi]
Length = 3848
Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 51/286 (17%), Positives = 78/286 (27%), Gaps = 52/286 (18%)
Query: 27 DIKWHTGLGKEVINMPARSLDK--------------LVAPFREETHDQPNYYRGSRTDPH 72
D + G G I DK + P E + Q Y +
Sbjct: 2067 DQSAYVGGGSSPITKQLDLADKFEIQNKHYSINYKPVGEPTSELINGQT--YAATIQAGG 2124
Query: 73 SVGTGAHLVEGLTSLAPYIAGA--ALAGKLLSFIPTPLTRLAGLA-----------LQSA 119
++ TSL P G ALA L+ + + T + A + +
Sbjct: 2125 AITASFTQNISNTSLQPGSGGVMPALATPTLAGV-SAFTPVGAQAGRELSGGTAAAVSGS 2183
Query: 120 PLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKT 179
PL+ L+ +AE TA R L P I
Sbjct: 2184 PLSGTGNGVALAGQAERP----------GTAAGAVTRAGTDAGGGTLTPAGI-------D 2226
Query: 180 VASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQ 239
G V G + G L G +A +GL A G
Sbjct: 2227 SGLGTAAPVAPGALSPGDLQAALRQ-GLAQVAGPSLTDYPLPTSQNGLFVADTAGDSRYL 2285
Query: 240 VQ-NMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTD 284
++ N +L + + + L G+ +PG + TD
Sbjct: 2286 IRSNPTLSQLGQVDNSLFGDL---RGLLGQTPGTSVPVETTPTLTD 2328
>gi|218898457|ref|YP_002446868.1| transketolase [Bacillus cereus G9842]
gi|218542934|gb|ACK95328.1| transketolase [Bacillus cereus G9842]
Length = 664
Score = 37.0 bits (84), Expect = 6.3, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 12/119 (10%)
Query: 150 ADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLN----VPFGMVERGWSSKVLEDH 205
A + I + + A + K S N V G + G + + +
Sbjct: 113 ATTGPLGQGIANAVGMAMAEAHLAAKFNKDGHSIIDHNTYALVGDGDLMEGVAYEAMSMA 172
Query: 206 GYPDMAQHYRIFDMESLITDGLIGAFFG--------GMHSKQVQNMSLRLVNDLKEGIT 256
G+ + + ++D + DG +G F +H + V+ V+ + + IT
Sbjct: 173 GHMKLGKLIVLYDSNEISLDGELGIAFSEDIQKRAESVHWQYVRVEDGTDVDAITKAIT 231
>gi|288919619|ref|ZP_06413948.1| D-alanine/D-alanine ligase [Frankia sp. EUN1f]
gi|288349017|gb|EFC83265.1| D-alanine/D-alanine ligase [Frankia sp. EUN1f]
Length = 369
Score = 37.0 bits (84), Expect = 6.8, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 40/111 (36%), Gaps = 8/111 (7%)
Query: 77 GAHLVEGLTS-LAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAE 135
A VE L S +A G+ L LAG+ +P+ AGAL +
Sbjct: 76 LAGAVEVLRSCVAAVPMLHGPGGE--DGTLAALCELAGVPYVGSPVRAGALA-----MDK 128
Query: 136 SSIHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVL 186
+ E V TA + A A++AP + ++ + G L
Sbjct: 129 WATKLVAEAVGVRTAPGILVNRARTAAGAVMAPLPAVVKPVSAGSSYGVSL 179
>gi|301105238|ref|XP_002901703.1| inositol transporter, putative [Phytophthora infestans T30-4]
gi|262100707|gb|EEY58759.1| inositol transporter, putative [Phytophthora infestans T30-4]
Length = 488
Score = 37.0 bits (84), Expect = 7.0, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 30/103 (29%), Gaps = 8/103 (7%)
Query: 87 LAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVD 146
+ P + L S L+ L A+ ++ ++ A LS +
Sbjct: 1 MTPSGVISGALVLLQSPQGFALSDLQSEAVVASAVSGAIAGAALSGIGNDKFGRR----- 55
Query: 147 KETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVP 189
LA + L+A + IA + G +
Sbjct: 56 ---QVILASSALFTVGAGLMAVAGSFLELIAGRLIVGVGIGCA 95
>gi|297202669|ref|ZP_06920066.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197713244|gb|EDY57278.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 378
Score = 37.0 bits (84), Expect = 7.0, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 18/187 (9%)
Query: 30 WHTGLGKEVINMPA--RSLDKLVAPFREETHDQPNYYRGSRTDPH----SVGTGAHLVEG 83
+ TG +++ A + K+V R T +V T ++
Sbjct: 129 FFTGFISDLVANTAVAERVAKIVDLVRLFTSAAERVAGLLERFSGLSAETVATLERMLTA 188
Query: 84 LTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIE 143
+ ++ A L +F+ + + A+ P+ GA +
Sbjct: 189 VARVSASFARTGLESFATNFVADSGSLMVTQAVNGQPVTVGADL--------RNGALLAG 240
Query: 144 GVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLE 203
G TA A A + + L G + + T A+GA+ NV G+ + +
Sbjct: 241 GTAGFTAGAGAIGARVTGVAGDLLRG----EGLLGTAANGALGNVTGGVTADYANGQDAS 296
Query: 204 DHGYPDM 210
G +
Sbjct: 297 TMGQDAL 303
>gi|83747470|ref|ZP_00944509.1| Hypothetical Protein RRSL_02855 [Ralstonia solanacearum UW551]
gi|83725927|gb|EAP73066.1| Hypothetical Protein RRSL_02855 [Ralstonia solanacearum UW551]
Length = 433
Score = 37.0 bits (84), Expect = 7.3, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 69/209 (33%), Gaps = 44/209 (21%)
Query: 10 DIRDNIKEWAQRPRVSPDIKWHTGLGKE--------VINMPARSLDKLVA------PFRE 55
D++ + +A+ P + G G ++ + L A P
Sbjct: 146 DVKQQLTAFAKTPAQVGAV---VGAGSGVADAFGGSLVTKATSNTQWLAASAAHLEPVMA 202
Query: 56 ETHD--QPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIA---GAALAGKLLSFIPTPLTR 110
+ H QP+ R + + + T +AP GAA A + S+I
Sbjct: 203 QAHQAVQPSLRRLAVEVSGAFQAYSLRNVVRTGVAPLATHVLGAATAANVDSWI------ 256
Query: 111 LAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGV----DKETADALAWREA-------I 159
A P+A A Y + H E+ E + D ET L +++
Sbjct: 257 ----AAVGGPVAGAAAYMAMQHMNETQHRTGAEYLLGRTDWETQFTL-LKQSTWTDPLKG 311
Query: 160 VHTSALLAPGAIASQSIAKTVASGAVLNV 188
A P + ++++A T + N+
Sbjct: 312 AAQRAAKLPVDLLTETLAATRSLFTATNI 340
>gi|220911249|ref|YP_002486558.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Arthrobacter chlorophenolicus A6]
gi|219858127|gb|ACL38469.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Arthrobacter chlorophenolicus A6]
Length = 328
Score = 37.0 bits (84), Expect = 7.6, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 66/195 (33%), Gaps = 23/195 (11%)
Query: 82 EGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAP-LAAGALYAYLSHKAESS-IH 139
+ L L+P L G + P + P + AGA+ L + +
Sbjct: 13 QLLADLSPLP--EGLRGVVWDMQGEPDAAHGSIDGVILPYINAGAVLGNLDKVQDLKFVQ 70
Query: 140 HQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGWSS 199
Q G D + + PGA + + A+ A L V + +
Sbjct: 71 TQSTGFD-----------GVREAAG---PGAAVANASGVHAAATAELAVGLILAKLRGID 116
Query: 200 KVLEDHGYPDMAQHYRIFDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERL 259
+ + D + A R +SL ++ GG+ + + + V + G TER
Sbjct: 117 QAVRDQATENWAPQRR----QSLADRRVLLLGIGGIGQELARRLEPFEVTVTRVGSTERT 172
Query: 260 PYKHGVKSSSPGLHT 274
+HG SS L T
Sbjct: 173 D-EHGQVHSSAQLET 186
>gi|219682767|ref|YP_002469150.1| nicotinate phosphoribosyltransferase [Bifidobacterium animalis
subsp. lactis AD011]
gi|241190343|ref|YP_002967737.1| nicotinate phosphoribosyltransferase [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|241195749|ref|YP_002969304.1| nicotinate phosphoribosyltransferase [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|219620417|gb|ACL28574.1| putative nicotinate phosphoribosyltransferase [Bifidobacterium
animalis subsp. lactis AD011]
gi|240248735|gb|ACS45675.1| nicotinate phosphoribosyltransferase [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|240250303|gb|ACS47242.1| nicotinate phosphoribosyltransferase [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|289178066|gb|ADC85312.1| Nicotinate phosphoribosyltransferase [Bifidobacterium animalis
subsp. lactis BB-12]
gi|295793330|gb|ADG32865.1| nicotinate phosphoribosyltransferase [Bifidobacterium animalis
subsp. lactis V9]
Length = 486
Score = 36.7 bits (83), Expect = 7.7, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 82/231 (35%), Gaps = 23/231 (9%)
Query: 107 PLTRLAGLALQSAP-LAAGALYAYLSHKAESSIH-HQIEGVDKETA---DALAWREAIVH 161
L L P + A L H +E QI + T D EA+
Sbjct: 226 GTANLLAAKLYDLPAIGTAAHCFTLVHDSERQAFESQIAALGTNTTLLVDTYNIEEAVKT 285
Query: 162 TSALLAPGAIASQSIAKTVASGA--VLNV--PFGMVE-RGWSSKVLEDHGYPDMAQHYRI 216
+ P + + +A+ A V N G + + L++ Y +
Sbjct: 286 AVEVAGPNLGGVRIDSGDLAALAQRVRNQLDALGATNTKITVTNDLDE--YAIASLQTAP 343
Query: 217 FDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSF 276
D + T + G+ G V ++ R N G E + K K+++PG +F
Sbjct: 344 VDSYGVGTQLVTGS--GAPTCAMVYKLTERANN---AGHMEPVAKKSVDKATAPGAKLAF 398
Query: 277 DAYE---AHTDTLAHGVDSLVRGEYPHFDQEKLQT--IADNTLEDPHFKPH 322
+YE A + + G +S + P E L T + + T+ DP F+ H
Sbjct: 399 RSYEYSLADCEHVISGSESALENFVPGEGWEDLLTDFVVNGTV-DPQFQGH 448
>gi|183601852|ref|ZP_02963221.1| nicotinate phosphoribosyltransferase [Bifidobacterium animalis
subsp. lactis HN019]
gi|183218737|gb|EDT89379.1| nicotinate phosphoribosyltransferase [Bifidobacterium animalis
subsp. lactis HN019]
Length = 440
Score = 36.7 bits (83), Expect = 7.7, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 82/231 (35%), Gaps = 23/231 (9%)
Query: 107 PLTRLAGLALQSAP-LAAGALYAYLSHKAESSIH-HQIEGVDKETA---DALAWREAIVH 161
L L P + A L H +E QI + T D EA+
Sbjct: 180 GTANLLAAKLYDLPAIGTAAHCFTLVHDSERQAFESQIAALGTNTTLLVDTYNIEEAVKT 239
Query: 162 TSALLAPGAIASQSIAKTVASGA--VLNV--PFGMVE-RGWSSKVLEDHGYPDMAQHYRI 216
+ P + + +A+ A V N G + + L++ Y +
Sbjct: 240 AVEVAGPNLGGVRIDSGDLAALAQRVRNQLDALGATNTKITVTNDLDE--YAIASLQTAP 297
Query: 217 FDMESLITDGLIGAFFGGMHSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSF 276
D + T + G+ G V ++ R N G E + K K+++PG +F
Sbjct: 298 VDSYGVGTQLVTGS--GAPTCAMVYKLTERANN---AGHMEPVAKKSVDKATAPGAKLAF 352
Query: 277 DAYE---AHTDTLAHGVDSLVRGEYPHFDQEKLQT--IADNTLEDPHFKPH 322
+YE A + + G +S + P E L T + + T+ DP F+ H
Sbjct: 353 RSYEYSLADCEHVISGSESALENFVPGEGWEDLLTDFVVNGTV-DPQFQGH 402
>gi|56708986|ref|YP_165031.1| histidinol dehydrogenase [Ruegeria pomeroyi DSS-3]
gi|81819866|sp|Q5LL27|HISX3_SILPO RecName: Full=Histidinol dehydrogenase 3; Short=HDH 3
gi|56680671|gb|AAV97336.1| histidinol dehydrogenase [Ruegeria pomeroyi DSS-3]
Length = 433
Score = 36.7 bits (83), Expect = 8.0, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 38/136 (27%), Gaps = 4/136 (2%)
Query: 40 NMPARSLDKLVAPFREETHDQPNYYRGSRTDPHSVGTGAHLVEGLTSLAPYIAGAALAGK 99
P A + D P+ V A + L AL +
Sbjct: 8 RQPDFETA-FTALLGAKREDSPDVDAVVAGIIADVR--ARGDAAVIELTERFDRVALTPQ 64
Query: 100 LLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAI 159
L F + + A A + E + + D +T L WR +
Sbjct: 65 SLRFSTEEIAQAVDEVPAPERAALELAAARIRAYHERQMPQDADWTD-DTGARLGWRWSA 123
Query: 160 VHTSALLAPGAIASQS 175
V + L PG +AS
Sbjct: 124 VSAAGLYVPGGLASYP 139
>gi|154687620|ref|YP_001422781.1| hypothetical protein RBAM_032200 [Bacillus amyloliquefaciens FZB42]
gi|154353471|gb|ABS75550.1| NagA [Bacillus amyloliquefaciens FZB42]
Length = 396
Score = 36.7 bits (83), Expect = 8.5, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 68/200 (34%), Gaps = 14/200 (7%)
Query: 109 TRLAGLALQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADALAWREAIVHT--SALL 166
T LQ A A +L A SS HH+ G A+ +A L
Sbjct: 203 TDAGAELLQKAADAGAVHMTHL-FNAMSSFHHRKPG---------GIGTALACGRITAEL 252
Query: 167 APGAIASQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPDMAQHYRIFDMESLITDG 226
I S +A +A A + M+ +K L+D Y Q + +L++DG
Sbjct: 253 ITDGIHSHPLAVKLAYLAKGSKNLIMITDSMRAKGLKDGEYEFGGQKVTVRGDTALLSDG 312
Query: 227 LIGAFFGGM--HSKQVQNMSLRLVNDLKEGITERLPYKHGVKSSSPGLHTSFDAYEAHTD 284
+ M + ++ + D+ + + G+ + DA TD
Sbjct: 313 TLAGSILKMNEGAALMRRFTNCSWLDIANMTSANAARRLGIFDRKGSIAEGKDADVVLTD 372
Query: 285 TLAHGVDSLVRGEYPHFDQE 304
+ ++ RG + +E
Sbjct: 373 GQCGVLATICRGNTAYISRE 392
>gi|167583581|ref|YP_001671771.1| hypothetical protein phi32_26 [Enterobacteria phage phiEco32]
gi|164375419|gb|ABY52827.1| hypothetical protein phi32_26 [Enterobacteria phage phiEco32]
Length = 1473
Score = 36.7 bits (83), Expect = 8.6, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 40/117 (34%), Gaps = 7/117 (5%)
Query: 99 KLLSFIPTPLTRLAGLA-----LQSAPLAAGALYAYLSHKAESSIHHQIEGVDKETADAL 153
K+ I + + AG+A + PLAA A+ A + EG DK +
Sbjct: 116 KIEDGIGKTVGQYAGVAGDIGMTVANPLAAAAIIAGRETGRAYADQTPEEGEDK-SILDA 174
Query: 154 AWREAIVHTSALLAPGAIA-SQSIAKTVASGAVLNVPFGMVERGWSSKVLEDHGYPD 209
A + + + PGA+ ++S + N G + Y D
Sbjct: 175 ALVGGANYAAQRILPGAVGTAESTLGRIGQNVASNAVAGAKGGALVGAAEVQNKYGD 231
>gi|115380545|ref|ZP_01467507.1| salicylate biosynthesis isochorismate synthase [Stigmatella
aurantiaca DW4/3-1]
gi|310821605|ref|YP_003953963.1| isochorismate synthase [Stigmatella aurantiaca DW4/3-1]
gi|115362446|gb|EAU61719.1| salicylate biosynthesis isochorismate synthase [Stigmatella
aurantiaca DW4/3-1]
gi|309394677|gb|ADO72136.1| Isochorismate synthase [Stigmatella aurantiaca DW4/3-1]
Length = 453
Score = 36.7 bits (83), Expect = 9.1, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 52/186 (27%), Gaps = 21/186 (11%)
Query: 21 RPRVSPDIKWHTGLGKEVINMPARSLDKLVAPFREETHDQPNYYRGSRTDPHS---VGTG 77
P ++ +W G+ P +D L P D P + V
Sbjct: 23 APALAGQERWVGGMLYLAAVDPLAGVDVLGEP--SLYWDSPQMREVVAGWGEAGAMVAGS 80
Query: 78 AHLVEGLTSLAPYIAGAALAGKLLSFIPTPLTRLAGLALQSAPLAAGALYAYLSHKAESS 137
A + L A AG++ + +P P A + G E
Sbjct: 81 AQEAREVLRLLSSAATVRWAGEVPASLPGPWFGGMRFAAEGKDEGWGPFGFGRWTLPER- 139
Query: 138 IHHQIEGVDKETADALAWREAIVHTSALLAPGAIASQSIAKTVASGAVLNVPFGMVERGW 197
+ WRE +A P ++ + + G N P G +
Sbjct: 140 ---------------MVWREGDRLAAAAFVPEGPGAEEQVRALLVGLGANFPAGPLPSRR 184
Query: 198 SSKVLE 203
+++ L
Sbjct: 185 TAQALR 190
>gi|71013544|ref|XP_758617.1| hypothetical protein UM02470.1 [Ustilago maydis 521]
gi|46098275|gb|EAK83508.1| hypothetical protein UM02470.1 [Ustilago maydis 521]
Length = 405
Score = 36.7 bits (83), Expect = 9.3, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 338 RQKPSEPLAEHPHPKRKEVERELSEIEGAKK-----ESSARKFFDEGSPDHSPFKGERNQ 392
R P + A P P R RE + + + + R F G+PD++P +G R+
Sbjct: 265 RGDPYDRYARGPPPPRDYAARERDYLGPPPRGGPGMDYAPRDFAPRGAPDYAPPRGYRDM 324
Query: 393 KLDPMRGADFTD 404
P RGA + D
Sbjct: 325 SPPPPRGARYDD 336
>gi|325092850|gb|EGC46160.1| cell cycle inhibitor Nif1 [Ajellomyces capsulatus H88]
Length = 767
Score = 36.7 bits (83), Expect = 9.7, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 5/95 (5%)
Query: 262 KHGVKSSSPGLHTSFDAYEAHTDTLAHGVDSLVRGEY--PHFDQEKLQTIADNTLEDPHF 319
K G + S + S D+ D S + +Y P ++ L+ PHF
Sbjct: 334 KRGNRPSPITVPESPDSSAKVDDAQTSAPTSYIYAKYALPRGRSVSRDSLVFTGLQTPHF 393
Query: 320 KPHLP--EPEPLPQYKEHSD-RQKPSEPLAEHPHP 351
+ + P E P P E Q+PS P A H HP
Sbjct: 394 EWNEPLFESSPSPSAPEKETLEQEPSSPAATHAHP 428
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.308 0.127 0.329
Lambda K H
0.267 0.0394 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,556,503,376
Number of Sequences: 14124377
Number of extensions: 126862999
Number of successful extensions: 462223
Number of sequences better than 10.0: 705
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 637
Number of HSP's that attempted gapping in prelim test: 460697
Number of HSP's gapped (non-prelim): 1832
length of query: 478
length of database: 4,842,793,630
effective HSP length: 143
effective length of query: 335
effective length of database: 2,823,007,719
effective search space: 945707585865
effective search space used: 945707585865
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 83 (36.6 bits)