BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254781204|ref|YP_003065617.1| hypothetical protein
CLIBASIA_05555 [Candidatus Liberibacter asiaticus str. psy62]
         (707 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|254781204|ref|YP_003065617.1| hypothetical protein CLIBASIA_05555 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040881|gb|ACT57677.1| hypothetical protein CLIBASIA_05555 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|317120670|gb|ADV02493.1| hypothetical protein SC1_gp045 [Liberibacter phage SC1]
 gi|317120814|gb|ADV02635.1| hypothetical protein SC1_gp045 [Candidatus Liberibacter asiaticus]
          Length = 707

 Score = 1154 bits (2986), Expect = 0.0,   Method: Composition-based stats.
 Identities = 707/707 (100%), Positives = 707/707 (100%)

Query: 1   MIEITTNKPLVEAVTPNQDAVRDSVNPQAGLRDLGDALGKATQFLEGIRRDNAFATANTR 60
           MIEITTNKPLVEAVTPNQDAVRDSVNPQAGLRDLGDALGKATQFLEGIRRDNAFATANTR
Sbjct: 1   MIEITTNKPLVEAVTPNQDAVRDSVNPQAGLRDLGDALGKATQFLEGIRRDNAFATANTR 60

Query: 61  YTELSFKAVQDFHDFTNSLDTRDSLQAGDKIKEYVDGRIRSAYDRFLSSISHRDVRKKFQ 120
           YTELSFKAVQDFHDFTNSLDTRDSLQAGDKIKEYVDGRIRSAYDRFLSSISHRDVRKKFQ
Sbjct: 61  YTELSFKAVQDFHDFTNSLDTRDSLQAGDKIKEYVDGRIRSAYDRFLSSISHRDVRKKFQ 120

Query: 121 AQVEHDIRDYHTKGVDIQIGATQRAQEDNLNMTVGLAAAHVLHDPSNENYFQRVQSITDH 180
           AQVEHDIRDYHTKGVDIQIGATQRAQEDNLNMTVGLAAAHVLHDPSNENYFQRVQSITDH
Sbjct: 121 AQVEHDIRDYHTKGVDIQIGATQRAQEDNLNMTVGLAAAHVLHDPSNENYFQRVQSITDH 180

Query: 181 INSLPIDLRLKQKLLSEAKEKLNTNQIIGAHARDPRVFENFMRAFYKKGHPPKDSTSLSD 240
           INSLPIDLRLKQKLLSEAKEKLNTNQIIGAHARDPRVFENFMRAFYKKGHPPKDSTSLSD
Sbjct: 181 INSLPIDLRLKQKLLSEAKEKLNTNQIIGAHARDPRVFENFMRAFYKKGHPPKDSTSLSD 240

Query: 241 VSDSARERSLEVVEDVSKAIGLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQAR 300
           VSDSARERSLEVVEDVSKAIGLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQAR
Sbjct: 241 VSDSARERSLEVVEDVSKAIGLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQAR 300

Query: 301 RIDAQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDA 360
           RIDAQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDA
Sbjct: 301 RIDAQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDA 360

Query: 361 KKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPL 420
           KKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPL
Sbjct: 361 KKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPL 420

Query: 421 RFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGA 480
           RFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGA
Sbjct: 421 RFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGA 480

Query: 481 YNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYN 540
           YNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYN
Sbjct: 481 YNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYN 540

Query: 541 TDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRV 600
           TDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRV
Sbjct: 541 TDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRV 600

Query: 601 SDAMQIVLGNTPVNINESMLMPPRGMSKTDFEDRLWYATKDTGEYDPYTIKYMNVGSGKY 660
           SDAMQIVLGNTPVNINESMLMPPRGMSKTDFEDRLWYATKDTGEYDPYTIKYMNVGSGKY
Sbjct: 601 SDAMQIVLGNTPVNINESMLMPPRGMSKTDFEDRLWYATKDTGEYDPYTIKYMNVGSGKY 660

Query: 661 MIIKNGNPKVDKEGKTIIINVEDVNRDERMESTIRHYEHQIFNEHAP 707
           MIIKNGNPKVDKEGKTIIINVEDVNRDERMESTIRHYEHQIFNEHAP
Sbjct: 661 MIIKNGNPKVDKEGKTIIINVEDVNRDERMESTIRHYEHQIFNEHAP 707


>gi|268589385|ref|ZP_06123606.1| hypothetical protein PROVRETT_05517 [Providencia rettgeri DSM 1131]
 gi|291315412|gb|EFE55865.1| hypothetical protein PROVRETT_05517 [Providencia rettgeri DSM 1131]
          Length = 832

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 94/478 (19%), Positives = 183/478 (38%), Gaps = 64/478 (13%)

Query: 236 TSLSDVSDSARERSLEVVEDVSKAIGLAGWDRLDDTKRRRLLEHLSSRDNALNTKLR--- 292
           T LSDV  S  +  +      ++  G   W  L   ++ +L++   +  N    + +   
Sbjct: 377 TRLSDVDKSQYQPEIRK----AQGGGFPWWPMLTPVQQYQLIKQGEAAQNKQRQEYKSVL 432

Query: 293 ----KETQAQARRIDAQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAAPD 348
               K+ +A A R ++  N      PS    L+++  A+G   G + Y   Q       D
Sbjct: 433 DGKVKDAEALALRGESYSN-----PPS----LDEFKYAHGENDGIKEYEQFQKNMAMGAD 483

Query: 349 VARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAI 408
           +A ++ +S       L+    +   + + +        K  + L ++     +    D I
Sbjct: 484 IATVQYLSPQAQTALLESKKPKGDYDAANNY-------KRYDTLARAIDTVNKVRASDPI 536

Query: 409 SWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKR 468
            + I  +Q++ L F + ++F +SL QR+  V  I  +Y    + F+  EE  L   + K 
Sbjct: 537 QFSIDRQQVNQLDFSSIQNFTNSLTQRSSNVGDISKNYQTPLTVFSAQEELVLSQLMEKA 596

Query: 469 PASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNGLSAVV----------------RLSS 512
           PAS+ ++ +      L ++  E   ++   +  +  S  V                + SS
Sbjct: 597 PASQKIEYLDAIRQGLKNN--ESYTAALRQVSKSDTSLAVAGVIMNKPTQLTVEYNKWSS 654

Query: 513 EFSDDAKNAAMVILSG---MKHQKDTETRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAG 569
           +     + AA +I+ G    K  KD     +T+ +    D + D +       ++ + + 
Sbjct: 655 DIVVTPQQAAQLIVQGSTARKSGKDFVLPKDTELREEFADFVGDVFAG----DIDGANSA 710

Query: 570 GNFNKDKEAIKLYLLGSMKDSGNYT--LNRVRVSDAMQIVLGNTPVNINESMLMPPRGMS 627
               KD  A      G M  +GN     ++     A+ I  G          +M P GM 
Sbjct: 711 YEVAKDAYA------GMMAKNGNINGEYDKDIWQQAINIATGGIYDFNGRGKVMLPWGMD 764

Query: 628 KTDFEDR----LWYATKDTGEYDPYTIKYMNVGSGKYMIIKNGNPKVDKEGKTIIINV 681
              F+ +    L Y   + G      I   ++G  +Y+I +     + K+G  +II++
Sbjct: 765 GDTFKKQVKSELKYHEPEIGNISVDIIGMQSLGDSQYLIKRGSGYLLYKDGTPVIIDL 822


>gi|301028420|ref|ZP_07191666.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|299878531|gb|EFI86742.1| conserved hypothetical protein [Escherichia coli MS 196-1]
          Length = 843

 Score =  344 bits (881), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 81/520 (15%), Positives = 173/520 (33%), Gaps = 68/520 (13%)

Query: 212 ARDPRVFENFMRAF--YKKGHPPKDSTSLSDVSDSARERSLEVVEDVSKAIGLAGWDRLD 269
           A +P   ++  +A   +++G  P     L+    +A   S ++     +  G+A +D L 
Sbjct: 343 ASNPDTLKSLCKAIIHHEQGSQPYSDQQLAAGVSAALGLS-QLPTKNKRYTGVAWFDALS 401

Query: 270 DTKRRRLLEHLSSRDNALNTKLRKETQAQARRIDAQLNHGITVK--PSELIPLEDYTQAY 327
           ++ +  +L    +       + R   +++ R   A    G+     P E     ++  AY
Sbjct: 402 ESDQASVLRQTDALARQQQAEYRTMLESRVRDATAAYMRGVEFPNPPGE----GEFIAAY 457

Query: 328 GVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATK 387
           GV +G   Y   +   +A   +   + M T     +++++  +         AS     +
Sbjct: 458 GVREGNLRYTEFRNLQIAGQYIGSFRNMPTSSITAYVEQLRPD-TGETGEGYASR---AE 513

Query: 388 YKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKIKDDYN 447
             + +  +  + + +   +  S  ++     P+  +  +     +  R    + +     
Sbjct: 514 LFDRVSAAATKGITQRQNNPFSAAVEIGAYKPITSNNPDDITAEVANRFSSQESL-RALG 572

Query: 448 LTTSHFNKTEENQLRTQLV-KRPASESVDLIRGAYNTLS-------------DSDKEGVR 493
           +     N  E   L  Q+   +   +++ L++     L              +S      
Sbjct: 573 INAPLLNSEEAAALAQQVRGTQNVDQTIKLLQSMGEKLPAPAIRQVASVIAPNSAATAYS 632

Query: 494 SSFAHIEDN---GLSAVVRLSSEFSDDAK----NAAMVILSG------MKHQKD-----T 535
           +      DN        +  S            + A VILSG       K  K+      
Sbjct: 633 ALLLGTPDNQYDNTRPTIPYSQFIGYKPTMNKYDVAKVILSGDQLLNPTKAMKNAGITPV 692

Query: 536 ETRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTL 595
           +       K    + + +++   P  +        +  K   A   Y  G          
Sbjct: 693 QLPSEDKMKDAFDEQVGNAFARNPQLR----QISYSLFKAAYAGIAYQSGDASTVRTSMP 748

Query: 596 NRVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDFEDRL----WYATKDTG-------E 644
           +   V+DA++   G      N   ++ P GM K+ F+DR       A KD G        
Sbjct: 749 DTDIVADAVKYATGGIYNGFNGGDVVMPFGMDKSTFKDRYTTSAKQALKDAGLNVNAVSN 808

Query: 645 YDPYTIKYMNVGSGKYMIIKNGNPKVD--KEGKTIIINVE 682
           + P     +N+G+ +Y ++          +  K I++ VE
Sbjct: 809 FTP-----VNIGNNRYRLVNGSGRWATDPRTNKAIVVRVE 843


>gi|30387394|ref|NP_848223.1| hypothetical protein epsilon15p15 [Enterobacteria phage epsilon15]
 gi|30266049|gb|AAO06078.1| 15 [Salmonella phage epsilon15]
          Length = 842

 Score =  337 bits (864), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 76/476 (15%), Positives = 156/476 (32%), Gaps = 70/476 (14%)

Query: 235 STSLSDVSDSARERSLEVVEDVSKAIGLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKE 294
           +  LS +  S +  +     D +     A + R  D  R++  +    R N +++++R  
Sbjct: 377 AIGLSQLPTSTKRYTGNAAFDAASPEAQATFLRQADQIRKQ--QQAEYRTN-IDSRVRDA 433

Query: 295 TQAQARRIDAQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKL 354
           + A  R +D          P++     D+  AYGV +G   Y   +   +A   +   + 
Sbjct: 434 SAAYMRGVD------FPNAPTQ----TDFLAAYGVREGNLRYTEFRNTQIAGQYIGSFRN 483

Query: 355 MSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKY 414
           M T     +++++            AS     +  + +  +  + + +   +  +  ++ 
Sbjct: 484 MPTSSITAYVEQLRP-GTEETGEGYASR---AQLFDQVTAAATKVITQRQNNPFNAAVEI 539

Query: 415 KQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLV-KRPASES 473
               P+  + +      +  R    + +     +     +  E   L  Q+   +  +++
Sbjct: 540 GAYKPIASNNQNDITSEVANRFSSQESL-RALGINAPILSSEEAAALSEQVRGTKDVNQT 598

Query: 474 VDLIRGAYNTLS-------------DSDKEGVRSSFAHIEDN---GLSAVVRLSSEFSDD 517
           + L++    TL              ++      +      DN        +  S      
Sbjct: 599 ISLLQSMGKTLPAPAMRQVASAIAPNNAATAYSALLLGTPDNQYDNTKPSIAYSQFIGYK 658

Query: 518 AK----NAAMVILSG------MKHQKD-----TETRYNTDHKSNKFDSLYDSYINTPLTK 562
                 + + VIL+G       K  KD      +       K    D + +S+ N P  +
Sbjct: 659 PTMNKYDVSKVILAGDQLLNPTKAMKDAGITPVQLPSEDKLKRAFDDQVGNSFANNPQAR 718

Query: 563 LEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINESMLMP 622
                   N  K   A   Y  G    +     N   V  A Q   G      N   ++ 
Sbjct: 719 ----QLSYNLFKAAYAGIAYQSGDASMTKTDAANSDVVEKAAQYATGGVYKGFNGGDVVM 774

Query: 623 PRGMSKTDFEDRL----WYATKDTG-------EYDPYTIKYMNVGSGKYMIIKNGN 667
           P GM K+ F+DR       A KD G        + P     +N+G+ +Y ++    
Sbjct: 775 PFGMDKSTFKDRYTASAQQALKDAGLNVNAVSNFTP-----VNIGNNQYRLVSGSG 825


>gi|85059171|ref|YP_454873.1| hypothetical protein SG1193 [Sodalis glossinidius str. 'morsitans']
 gi|84779691|dbj|BAE74468.1| hypothetical phage protein [Sodalis glossinidius str. 'morsitans']
          Length = 843

 Score =  313 bits (801), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 83/452 (18%), Positives = 165/452 (36%), Gaps = 55/452 (12%)

Query: 267 RLDDTKRRRLLEHLSSRDNALNTKLRKETQAQARRIDAQLNHGITVKPSELIPLEDYTQA 326
           +LD  +  RL      + N    + R E + + +   A    G    P E    +++T+A
Sbjct: 398 QLDPVQLARLRSVAQGQLNQQQREYRVELEGELKDFTAAALRGKNY-PREFTA-DEFTRA 455

Query: 327 YGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMAT 386
           YG + G + Y           D++ ++ +S    +  L   +      P    A    A 
Sbjct: 456 YGYDAGQKAYANYLDTQQLGSDISTVQQLSPVGQQALLNAREP----VPGEGYAE---AA 508

Query: 387 KYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKIKDDY 446
           K  E L+K+     +   QD + +  + KQI PL   T E+F   L  R     ++   Y
Sbjct: 509 KRHETLQKAVEYVNRARMQDPVQYAAEQKQIAPLDMQTPEAFRAGLSSRGSLAPELARHY 568

Query: 447 NLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNGLSA 506
               + F+++E +Q+   L   PAS+S+  +      L         ++   +     SA
Sbjct: 569 GTPLAIFSQSEASQIGEMLRSAPASQSIAYLDALRQGL--GAGVQYSAALQQVSRYAPSA 626

Query: 507 VVR-----------------LSSEFSDDAKNAAMVILSGMKHQ--------------KDT 535
            V                  LS++      +AA  I+ G   +              +  
Sbjct: 627 AVAGAIMGKRGNVIGNEGGWLSADLMVTPDDAAKTIIEGANARAGVTTNVNGVENKTRGI 686

Query: 536 ETRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTL 595
           E   +TD +    D +  ++        E +    +  KD  A  +   G++        
Sbjct: 687 EMPKDTDLRPEFVDKVGKAFAG----DAEGAAQAYDVAKDYYAGVMARKGNVSGE----Y 738

Query: 596 NRVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDFEDRLWYATK-----DTGEYDPYTI 650
           ++   + A+ +  G       +  ++ P GMS++ F   +  A K     D  +  P   
Sbjct: 739 DKDTWTQAINVATGGVYDYGGQGDVLLPWGMSESQFNKAVGVAWKKQVLDDGIKPPPGRY 798

Query: 651 KYMNVGSGKYMIIKNGNPKVDKEGKTIIINVE 682
              + G  +Y++   G   + K+G+ ++++++
Sbjct: 799 GLQSHGDSQYLVKLGGGYLLGKDGRPVVLHID 830


>gi|320175034|gb|EFW50147.1| putative bacteriophage protein [Shigella dysenteriae CDC 74-1112]
          Length = 837

 Score =  280 bits (715), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 78/471 (16%), Positives = 165/471 (35%), Gaps = 54/471 (11%)

Query: 238 LSDVSDSARERSLEVVEDVSKAIGLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQA 297
           LS +  + +  +     D +     A + R  D  RR   +  +     +++K+R  T A
Sbjct: 381 LSTIPTNTKRYTGNAAFDAASPEAQASFMRQADQLRR---QQQAEYKTIIDSKVRDATAA 437

Query: 298 QARRIDAQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMST 357
             R ++          P E    +D+  AYGV +G   Y   +   +A   +   + M T
Sbjct: 438 YMRGVE------FPNPPGE----DDFIAAYGVREGNLRYTEFRNTQIAGQYIGSFRNMPT 487

Query: 358 FDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQI 417
                +++++  +         AS        + +  +  Q +++   D + + +   Q 
Sbjct: 488 SSITAYVEQLRPD-TGETGEGYASR---AALYDNVVSAANQVIKQRQSDPVQFSLASGQA 543

Query: 418 DPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLI 477
            P+    +++F  S+  RA  +  +   Y    + F+K E NQ+       P S+    +
Sbjct: 544 KPIDMSNKDNFGQSVALRAAQISDLAKSYGTPLTFFSKDEANQIGVFFRDAPVSQQAAYL 603

Query: 478 RGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVR----------------LSSEFSDDAKNA 521
                  S    +   S+   I  N  SA V                  + + S   + A
Sbjct: 604 DTIRQ--STGGGQVYMSALQQISANAPSAAVAGILMDKPGGILAETNWFNPDVSVSPETA 661

Query: 522 AMVILSGMKHQKDT------ETRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKD 575
           A  IL+G   +K T          + D +    D + D++        + ++      KD
Sbjct: 662 AQTILAGAAARKGTDDAKGIPMPKDADLRLEFSDMVKDAFAG----DAQGASMAYEIAKD 717

Query: 576 KEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDFEDRL 635
             A  +   G +       ++      A+ +  G          ++ P GMS   F+ ++
Sbjct: 718 YYAGVMAKKGVISGE----IDTDIWKQAVNVATGGVHDYNGMGNVLLPWGMSAEQFDKQV 773

Query: 636 W--YATKDTG---EYDPYTIKYMNVGSGKYMIIKNGNPKVDKEGKTIIINV 681
              +  +  G   +  P      + G  +Y++       +  +G  +++N+
Sbjct: 774 NQAWNEQVVGTGIKTPPGQYGLQSYGDSQYLVKLGTGYLLKDDGSPVVLNL 824


>gi|218700979|ref|YP_002408608.1| hypothetical protein ECIAI39_2669 [Escherichia coli IAI39]
 gi|218370965|emb|CAR18792.1| conserved hypothetical protein from phage origin [Escherichia coli
           IAI39]
          Length = 837

 Score =  279 bits (714), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 74/450 (16%), Positives = 159/450 (35%), Gaps = 47/450 (10%)

Query: 261 GLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQARRIDAQLNHGITVK--PSELI 318
           G+A +D L ++ +  +L    +       + +    ++ R   A    GI     P E  
Sbjct: 393 GIAWFDALSESDQASVLRQTDALARQQQAEYKTMLDSRVRDATAAYMRGIEFPNPPGE-- 450

Query: 319 PLEDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLS 378
             +D+  AYGV +G   Y   +   +A   +   + M T     +++++  +   +    
Sbjct: 451 --DDFIAAYGVREGNLRYTEFKNTQIAGQYIGSFRNMPTSSITAYVEQLRPD-TGDTGEG 507

Query: 379 LASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGF 438
            A+        + +  +  Q +++   D + + +   Q  P+    +++F  S+  RA  
Sbjct: 508 YAAR---ATLYDNVVSAANQVIKQRQSDPVQFSLASGQAKPIDMSNKDNFGQSVALRAAQ 564

Query: 439 VKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAH 498
           V  +   Y    + F+K E NQ+       P S+    +       S    +   S+   
Sbjct: 565 VSDLAKSYGTPLTFFSKDEANQIGVFFRDAPVSQQAAYLDTIRQ--STGGGQVYMSALQQ 622

Query: 499 IEDNGLSAVVR----------------LSSEFSDDAKNAAMVILSGMKHQKDT------E 536
           I  N  SA V                  + + S   + AA  IL+G   +K T       
Sbjct: 623 ISANAPSAAVAGILMDKPGGILAEKNWFNPDVSVSPETAAQTILAGAAARKGTDDAKGIP 682

Query: 537 TRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLN 596
              + D +    D + D++        + ++      KD  A  +   G +       ++
Sbjct: 683 MPKDADLRLEFSDMVKDAFAG----DAQGASMAYEIAKDYYAGVMAKKGVVSGE----ID 734

Query: 597 RVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDFEDRLW--YATKDTG---EYDPYTIK 651
                 A+ +  G          ++ P GMS   F+ ++   +  +  G   +  P    
Sbjct: 735 NDVWKQAVNVATGGVHDYNGMGNVLLPWGMSAEQFDKQVNQAWNEQVVGSGIKTPPGQYG 794

Query: 652 YMNVGSGKYMIIKNGNPKVDKEGKTIIINV 681
             + G  +Y++       +  +G  +++N+
Sbjct: 795 LQSYGDSQYLVKLGTGYLLKDDGSPVVLNL 824


>gi|300898438|ref|ZP_07116779.1| conserved hypothetical protein [Escherichia coli MS 198-1]
 gi|300357905|gb|EFJ73775.1| conserved hypothetical protein [Escherichia coli MS 198-1]
          Length = 837

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 74/450 (16%), Positives = 159/450 (35%), Gaps = 47/450 (10%)

Query: 261 GLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQARRIDAQLNHGITVK--PSELI 318
           G+A +D L ++ +  +L    +       + +    ++ R   A    G+     P E  
Sbjct: 393 GVAWFDALSESDQASVLRQTDALARQQQAEYKTMLDSRVRDATAAYMRGVEFPNPPGE-- 450

Query: 319 PLEDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLS 378
             +D+  AYGV +G   Y   +   +A   +   + M T     +++++  +   +    
Sbjct: 451 --DDFIAAYGVREGNLRYTEFKNTQIAGQYIGSFRNMPTSSITAYVEQLRPD-TGDTGEG 507

Query: 379 LASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGF 438
            A+        + +  +  Q +++   D + + +   Q  P+    +++F  S+  RA  
Sbjct: 508 YAAR---AALYDNVVSAANQVIKQRQSDPVQFSLASGQAKPIDMSNKDNFGQSVALRAAQ 564

Query: 439 VKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAH 498
           V  +   Y    + F+K E NQ+       P S+    +       S    +   S+   
Sbjct: 565 VSDLAKSYGTPLTFFSKDEANQIGVFFRDAPVSQQAAYLDTIRQ--STGGGQVYMSALQQ 622

Query: 499 IEDNGLSAVVR----------------LSSEFSDDAKNAAMVILSGMKHQKDT------E 536
           I  N  SA V                  + + S   + AA  IL+G   +K T       
Sbjct: 623 ISANAPSAAVAGILMDKPGGILAEKNWFNPDVSVSPETAAQTILAGAAARKGTDDAKGIP 682

Query: 537 TRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLN 596
              + D +    D + D++        + ++      KD  A  +   G +       ++
Sbjct: 683 MPKDADLRIEFSDMVKDAFAG----DAQGASMAYEIAKDYYAGVMAKKGVVSGE----ID 734

Query: 597 RVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDFEDRLWYATKD----TGEYDP-YTIK 651
                 A+ +  G          ++ P GMS   F+ ++  A  +    TG   P     
Sbjct: 735 NDIWKQAVNVATGGVHDYNGMGNVLLPWGMSAEQFDKQVNQAWNEQVVGTGIKTPLGQYG 794

Query: 652 YMNVGSGKYMIIKNGNPKVDKEGKTIIINV 681
             + G  +Y++       +  +G  +++++
Sbjct: 795 LQSYGDSQYLVKLGTGYLLKDDGSPVVLDL 824


>gi|117624701|ref|YP_853614.1| hypothetical protein APECO1_4052 [Escherichia coli APEC O1]
 gi|115513825|gb|ABJ01900.1| conserved hypothetical protein [Escherichia coli APEC O1]
          Length = 837

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 74/450 (16%), Positives = 159/450 (35%), Gaps = 47/450 (10%)

Query: 261 GLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQARRIDAQLNHGITVK--PSELI 318
           G+A +D L ++ +  +L    +       + +    ++ R   A    GI     P E  
Sbjct: 393 GVAWFDALSESDQASVLRQTDALARQQQAEYKTMLDSRVRDATAAYMRGIEFPNPPGE-- 450

Query: 319 PLEDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLS 378
             +D+  AYGV +G   Y   +   +A   +   + M T     +++++  +   +    
Sbjct: 451 --DDFIAAYGVREGNLRYTEFKNTQIAGQYIGSFRNMPTSSITAYVEQLRPD-TGDTGEG 507

Query: 379 LASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGF 438
            A+        + +  +  Q +++   D + + +   Q  P+    +++F  S+  RA  
Sbjct: 508 YAAR---ATLYDNVVSAANQVIKQRQSDPVQFSLASGQAKPIDMSNKDNFGQSVALRAAQ 564

Query: 439 VKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAH 498
           V  +   Y    + F+K E NQ+       P S+    +       S    +   S+   
Sbjct: 565 VSDLAKSYGTPLTFFSKDEANQIGVFFRDAPVSQQAAYLDTIRQ--STGGGQVYMSALQQ 622

Query: 499 IEDNGLSAVVR----------------LSSEFSDDAKNAAMVILSGMKHQKDT------E 536
           I  N  SA V                  + + S   + AA  IL+G   +K T       
Sbjct: 623 ISANAPSAAVAGILMDKPGGILAEKNWFNPDVSVSPETAAQTILAGAAARKGTDDAKGIP 682

Query: 537 TRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLN 596
              + D +    D + D++        + ++      KD  A  +   G +       ++
Sbjct: 683 MPKDADLRLEFSDMVKDAFAG----DAQGASMAYEIAKDYYAGVMAKKGVVSGE----ID 734

Query: 597 RVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDFEDRLW--YATKDTG---EYDPYTIK 651
                 A+ +  G          ++ P GMS   F+ ++   +  +  G   +  P    
Sbjct: 735 NDVWKQAVNVATGGVHDYNGMGNVLLPWGMSAEQFDKQVNQAWNEQVVGSGIKTPPGQYG 794

Query: 652 YMNVGSGKYMIIKNGNPKVDKEGKTIIINV 681
             + G  +Y++       +  +G  +++N+
Sbjct: 795 LQSYGDSQYLVKLGTGYLLKDDGSPVVLNL 824


>gi|324008549|gb|EGB77768.1| hypothetical protein HMPREF9532_01736 [Escherichia coli MS 57-2]
          Length = 837

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 73/450 (16%), Positives = 158/450 (35%), Gaps = 47/450 (10%)

Query: 261 GLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQARRIDAQLNHGITVK--PSELI 318
           G+A +D L ++ +  +L    +       + +    ++ R   A    G+     P E  
Sbjct: 393 GVAWFDALSESDQASVLRQTDALARQQQAEYKTMLDSRVRDATAAYMRGVEFPNPPGE-- 450

Query: 319 PLEDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLS 378
             +D+  AYGV +G   Y   +   +A   +   + M T     +++++  +        
Sbjct: 451 --DDFIAAYGVREGNLRYTEFKNTQIAGQYIGSFRNMPTSSITAYVEQLRPD-TGETGEG 507

Query: 379 LASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGF 438
            A+        + +  +  Q +++   D + + +   Q  P+    +++F  S+  RA  
Sbjct: 508 YAAR---AALYDNVVSAANQVIKQRQSDPVQFSLASGQAKPIDMSNKDNFGQSVALRAAQ 564

Query: 439 VKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAH 498
           V  +   Y    + F+K E NQ+       P S+    +       S    +   S+   
Sbjct: 565 VSDLAKSYGTPLTFFSKDEANQIGVFFRDAPVSQQAAYLDTIRQ--STGGGQVYMSALQQ 622

Query: 499 IEDNGLSAVVR----------------LSSEFSDDAKNAAMVILSGMKHQKDT------E 536
           I  N  SA V                  + + S   + AA  IL+G   +K T       
Sbjct: 623 ISANAPSAAVAGILMDKPGGILAEKNWFNPDVSVSPETAAQTILAGAAARKGTDDAKGIP 682

Query: 537 TRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLN 596
              + D +    D + D++        + ++      KD  A  +   G +       ++
Sbjct: 683 MPKDADLRLEFSDMVKDAFAG----DAQGASMAYEIAKDYYAGVMAKKGVVSGE----ID 734

Query: 597 RVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDFEDRLW--YATKDTG---EYDPYTIK 651
                 A+ +  G          ++ P GMS   F+ ++   +  +  G   +  P    
Sbjct: 735 NDVWKQAVNVATGGVHDYNGMGNVLLPWGMSAEQFDKQVNQAWNEQVVGSGIKTPPGQYG 794

Query: 652 YMNVGSGKYMIIKNGNPKVDKEGKTIIINV 681
             + G  +Y++       +  +G  +++N+
Sbjct: 795 LQSYGDSQYLVKLGTGYLLKDDGSPVVLNL 824


>gi|323948674|gb|EGB44579.1| hypothetical protein ERKG_04897 [Escherichia coli H252]
          Length = 837

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 74/450 (16%), Positives = 159/450 (35%), Gaps = 47/450 (10%)

Query: 261 GLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQARRIDAQLNHGITVK--PSELI 318
           G+A +D L ++ +  +L    +       + +    ++ R   A    GI     P E  
Sbjct: 393 GVAWFDALSESDQASVLRQTDALARQQQAEYKTMLDSRVRDATAAYMRGIEFPNPPGE-- 450

Query: 319 PLEDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLS 378
             +D+  AYGV +G   Y   +   +A   +   + M T     +++++  +   +    
Sbjct: 451 --DDFIAAYGVREGNLRYTEFKNTQIAGQYIGSFRNMPTSSITAYVEQLRPD-TGDTGEG 507

Query: 379 LASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGF 438
            A+        + +  +  Q +++   D + + +   Q  P+    +++F  S+  RA  
Sbjct: 508 YAAR---ATLYDNVVSAANQVIKQRQSDPVQFSLASGQAKPIDMSNKDNFGQSVALRAAQ 564

Query: 439 VKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAH 498
           V  +   Y    + F+K E NQ+       P S+    +       S    +   S+   
Sbjct: 565 VSDLAKSYGTPLTFFSKDEANQIGVFFRDAPVSQQAAYLDTIRQ--STGGGQVYMSALQQ 622

Query: 499 IEDNGLSAVVR----------------LSSEFSDDAKNAAMVILSGMKHQKDT------E 536
           I  N  SA V                  + + S   + AA  IL+G   +K T       
Sbjct: 623 ISANAPSAAVAGILMDKPGGILAEKNWFNPDVSVSPETAAQTILAGAAARKGTDDAKGIP 682

Query: 537 TRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLN 596
              + D +    D + D++        + ++      KD  A  +   G +       ++
Sbjct: 683 MPKDADLRLEFSDMVKDAFAG----DAQGASMAYEIAKDYYAGVMAKKGVVSGE----ID 734

Query: 597 RVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDFEDRLW--YATKDTG---EYDPYTIK 651
                 A+ +  G          ++ P GMS   F+ ++   +  +  G   +  P    
Sbjct: 735 NDVWKQAVNVATGGVHDYNGMGNVLLPWGMSAEQFDKQVNQAWNEQVVGSGIKTPPGQYG 794

Query: 652 YMNVGSGKYMIIKNGNPKVDKEGKTIIINV 681
             + G  +Y++       +  +G  +++N+
Sbjct: 795 LQSYGDSQYLVKLGTGYLLKDDGSPVVLNL 824


>gi|331648165|ref|ZP_08349255.1| hypothetical protein ECIG_04091 [Escherichia coli M605]
 gi|331043025|gb|EGI15165.1| hypothetical protein ECIG_04091 [Escherichia coli M605]
          Length = 837

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 72/429 (16%), Positives = 152/429 (35%), Gaps = 55/429 (12%)

Query: 290 KLRKETQAQARR-IDAQLNHGITV---------KPSELIPLEDYTQAYGVEQGTELYNLQ 339
           +LR++ QA+ +  ID+Q+                P E    +D+  AYGV +G   Y   
Sbjct: 414 QLRRQQQAEYKTMIDSQVRDATAAYMRGVEFPNPPGE----DDFIAAYGVREGNLRYTEF 469

Query: 340 QFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQS 399
           +   +A   +   + M T     +++++  +         A+        + +  +  Q 
Sbjct: 470 RNTQIAGQYIGSFRNMPTSSITAYVEQLRPD-TGETGEGYAAR---AALYDNVVSAANQV 525

Query: 400 MQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEEN 459
           +++   D + + +   Q  P+    +++F  S+  RA  V  +   Y    + F+K E N
Sbjct: 526 IKQRQSDPVQFSLASGQAKPIDMSNKDNFGQSVALRAAQVSDLAKSYGTPLTFFSKDEAN 585

Query: 460 QLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVR---------- 509
           Q+       P S+    +       S    +   S+   I  N  SA V           
Sbjct: 586 QIGVFFRDAPVSQQAAYLDTIRQ--STGGGQVYMSALQQISANAPSAAVAGILMDKPGGI 643

Query: 510 ------LSSEFSDDAKNAAMVILSGMKHQKDT------ETRYNTDHKSNKFDSLYDSYIN 557
                  + + S   + AA  IL+G   +K T          + D +    D + D++  
Sbjct: 644 LAEKNWFNPDVSVSPETAAQTILAGAAARKGTDDAKGIPMPKDADLRLEFSDMVKDAFAG 703

Query: 558 TPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINE 617
                 + ++      KD  A  +   G +       ++      A+ +  G        
Sbjct: 704 ----DAQGASMAYEIAKDYYAGVMAKKGVVSGE----IDNDVWKQAVNVATGGVHDYNGM 755

Query: 618 SMLMPPRGMSKTDFEDRLW--YATKDTG---EYDPYTIKYMNVGSGKYMIIKNGNPKVDK 672
             ++ P GMS   F+ ++   +  +  G   +  P      + G  +Y++       +  
Sbjct: 756 GNVLLPWGMSAEQFDKQINQAWNEQVVGSGIKTPPGQYGLQSYGDSQYLVKLGTGYLLKD 815

Query: 673 EGKTIIINV 681
           +G  +++N+
Sbjct: 816 DGSPVVLNL 824


>gi|323156122|gb|EFZ42281.1| prophage MuMc02, structural protein P5 [Escherichia coli EPECa14]
          Length = 837

 Score =  276 bits (705), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 71/429 (16%), Positives = 151/429 (35%), Gaps = 55/429 (12%)

Query: 290 KLRKETQAQARR-IDAQLNHGITV---------KPSELIPLEDYTQAYGVEQGTELYNLQ 339
           +LR++ QA+ +  ID+Q+                P E     D+  AYGV +G   Y   
Sbjct: 414 QLRRQQQAEYKTMIDSQVRDATAAYMRGVEFPNPPGEA----DFIAAYGVREGNLRYTEF 469

Query: 340 QFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQS 399
           +   +A   +   + M T     +++++  +         A+        + +  +  Q 
Sbjct: 470 RNTQIAGQYIGSFRNMPTSSITAYVEQLRPD-TGETGEGYAAR---AALYDNVVSAASQV 525

Query: 400 MQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEEN 459
           +++   D + + +   Q  P+    +++F  S+  RA  V  +   Y    + F+K E N
Sbjct: 526 IKQRQADPVQFSLAAGQAKPIDMSNKDNFGQSVALRAAQVSDLAKSYGTPLTFFSKDEAN 585

Query: 460 QLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVR---------- 509
           Q+       P S+    +       S    +   S+   I  N  SA V           
Sbjct: 586 QIGVFFRDAPVSQQAAYLDTIRQ--STGGGQVYMSALQQISANAPSAAVAGILMDKPGGI 643

Query: 510 ------LSSEFSDDAKNAAMVILSGMKHQKDT------ETRYNTDHKSNKFDSLYDSYIN 557
                  + + S   + AA  IL+G   +K T          + D +    D + D++  
Sbjct: 644 LAEKNWFNPDVSVSPETAAQTILAGAAARKGTDDAKGIPMPKDADLRLEFSDMVKDAFAG 703

Query: 558 TPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINE 617
                 + ++      KD  A  +   G +       ++      A+ +  G        
Sbjct: 704 ----DAQGASMAYEIAKDYYAGVMAKKGVVSGE----IDNDIWKQAVNVATGGVHDYNGM 755

Query: 618 SMLMPPRGMSKTDFEDRLW--YATKDTG---EYDPYTIKYMNVGSGKYMIIKNGNPKVDK 672
             ++ P GMS   F+ ++   +  +  G   +  P      + G  +Y++       +  
Sbjct: 756 GNVLLPWGMSAEQFDKQVNQAWNEQVVGTGIKTPPGQYGLQSYGDSQYLVKLGTGYLLKD 815

Query: 673 EGKTIIINV 681
           +G  +++++
Sbjct: 816 DGSPVVLDL 824


>gi|298381707|ref|ZP_06991306.1| minor structural protein [Escherichia coli FVEC1302]
 gi|298279149|gb|EFI20663.1| minor structural protein [Escherichia coli FVEC1302]
          Length = 837

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 72/429 (16%), Positives = 151/429 (35%), Gaps = 55/429 (12%)

Query: 290 KLRKETQAQARR-IDAQLNHGITV---------KPSELIPLEDYTQAYGVEQGTELYNLQ 339
           +LR++ QA+ +  ID+Q+                P E     D+  AYGV +G   Y   
Sbjct: 414 QLRRQQQAEYKTMIDSQVRDATAAYMRGVEFPNPPGEA----DFIAAYGVREGNLRYTEF 469

Query: 340 QFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQS 399
           +   +A   +   + M T     +++++  +         A+        + +  +  Q 
Sbjct: 470 RNTQIAGQYIGSFRNMPTSSITAYVEQLRPD-TGETGEGYAAR---AALYDNVVSAASQV 525

Query: 400 MQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEEN 459
           +++   D + + +   Q  P+    +++F  S+  RA  V  +   Y    + F+K E N
Sbjct: 526 IKQRQADPVQFSLAAGQAKPIDMSNKDNFGQSVALRATQVSDLAKSYGTPLTFFSKDEAN 585

Query: 460 QLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVR---------- 509
           Q+       P S+    +       S    +   S+   I  N  SA V           
Sbjct: 586 QIGVFFRDAPVSQQAAYLDTIRQ--STGGGQVYMSALQQISANAPSAAVAGILMDKPGGI 643

Query: 510 ------LSSEFSDDAKNAAMVILSGMKHQKDT------ETRYNTDHKSNKFDSLYDSYIN 557
                  + + S   + AA  IL+G   +K T          + D +    D + D++  
Sbjct: 644 LAEKNWFNPDVSVSPETAAQTILAGAAARKGTDDAKGIPMPKDADLRLEFSDMVKDAFAG 703

Query: 558 TPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINE 617
                 + ++      KD  A  +   G +       ++      A+ +  G        
Sbjct: 704 ----DAQGASMAYEIAKDYYAGVMAKKGVVSGE----IDNDVWKQAVNVATGGVHDYNGM 755

Query: 618 SMLMPPRGMSKTDFEDRLW--YATKDTG---EYDPYTIKYMNVGSGKYMIIKNGNPKVDK 672
             ++ P GMS   F+ ++   +  +  G   +  P      + G  +Y++       +  
Sbjct: 756 GNVLLPWGMSAEQFDKQVNQAWNEQVVGSGIKTPPGQYGLQSYGDSQYLVKLGTGYLLKD 815

Query: 673 EGKTIIINV 681
           +G  +++N+
Sbjct: 816 DGSPVVLNL 824


>gi|89152439|ref|YP_512272.1| hypothetical structural protein [Escherichia phage phiV10]
 gi|74055462|gb|AAZ95911.1| hypothetical structural protein [Escherichia phage phiV10]
          Length = 837

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 71/429 (16%), Positives = 151/429 (35%), Gaps = 55/429 (12%)

Query: 290 KLRKETQAQARR-IDAQLNHGITV---------KPSELIPLEDYTQAYGVEQGTELYNLQ 339
           +LR++ QA+ +  ID+Q+                P E     D+  AYGV +G   Y   
Sbjct: 414 QLRRQQQAEYKTMIDSQVRDATAAYMRGVEFPNPPGEA----DFIAAYGVREGNLRYTEF 469

Query: 340 QFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQS 399
           +   +A   +   + M T     +++++  +         A+        + +  +  Q 
Sbjct: 470 RNTQIAGQYIGSFRNMPTSSITAYVEQLRPD-TGETGEGYAAR---AALYDNVVSAASQV 525

Query: 400 MQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEEN 459
           +++   D + + +   Q  P+    +++F  S+  RA  V  +   Y    + F+K E N
Sbjct: 526 IKQRQADPVQFSLAAGQAKPIDMSNKDNFGQSVALRAAQVSDLAKSYGTPLTFFSKDEAN 585

Query: 460 QLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVR---------- 509
           Q+       P S+    +       S    +   S+   I  N  SA V           
Sbjct: 586 QIGVFFRDAPVSQQAAYLDTIRQ--STGGGQVYMSALQQISANAPSAAVAGILMDKPGGI 643

Query: 510 ------LSSEFSDDAKNAAMVILSGMKHQKDT------ETRYNTDHKSNKFDSLYDSYIN 557
                  + + S   + AA  IL+G   +K T          + D +    D + D++  
Sbjct: 644 LAEKNWFNPDVSVSPETAAQTILAGAAARKGTDDAKGIPMPKDADLRLEFSDMVKDAFAG 703

Query: 558 TPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINE 617
                 + ++      KD  A  +   G +       ++      A+ +  G        
Sbjct: 704 ----DAQGASMAYEIAKDYYAGVMAKKGVVSGE----IDNDIWKQAVNVATGGVHDYNGM 755

Query: 618 SMLMPPRGMSKTDFEDRLW--YATKDTG---EYDPYTIKYMNVGSGKYMIIKNGNPKVDK 672
             ++ P GMS   F+ ++   +  +  G   +  P      + G  +Y++       +  
Sbjct: 756 GNVLLPWGMSAEQFDKQVNQAWNEQVVGTGIKTPPGQYGLQSYGDSQYLVKLGTGYLLKD 815

Query: 673 EGKTIIINV 681
           +G  +++++
Sbjct: 816 DGSPVVLDL 824


>gi|332344343|gb|AEE57677.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 837

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 72/429 (16%), Positives = 151/429 (35%), Gaps = 55/429 (12%)

Query: 290 KLRKETQAQARR-IDAQLNHGITV---------KPSELIPLEDYTQAYGVEQGTELYNLQ 339
           +LR++ QA+ +  ID+Q+                P E     D+  AYGV +G   Y   
Sbjct: 414 QLRRQQQAEYKTMIDSQVRDATAAYMRGVEFPNPPGEA----DFIAAYGVREGNLRYTEF 469

Query: 340 QFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQS 399
           +   +A   +   + M T     +++++  +         A+        + +  +  Q 
Sbjct: 470 RNTQIAGQYIGSFRNMPTSSITAYVEQLRPD-TGETGEGYAAR---AALYDNVVSAASQV 525

Query: 400 MQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEEN 459
           +++   D + + +   Q  P+    +++F  S+  RA  V  +   Y    + F+K E N
Sbjct: 526 IKQRQADPVQFSLAAGQAKPIDMSNKDNFGQSVALRAAQVSDLAKSYGTPLTFFSKDEAN 585

Query: 460 QLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVR---------- 509
           Q+       P S+    +       S    +   S+   I  N  SA V           
Sbjct: 586 QIGVFFRDAPVSQQAAYLDTIRQ--STGGGQVYMSALQQISANAPSAAVAGILMDKPGGI 643

Query: 510 ------LSSEFSDDAKNAAMVILSGMKHQKDT------ETRYNTDHKSNKFDSLYDSYIN 557
                  + + S   + AA  IL+G   +K T          + D +    D + D++  
Sbjct: 644 LAEKNWFNPDVSVSPETAAQTILAGAAARKGTDDAKGIPMPKDADLRFEFSDMVKDAFAG 703

Query: 558 TPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINE 617
                 + ++      KD  A  +   G +       ++      A+ +  G        
Sbjct: 704 ----DAQGASMAYEIAKDYYAGVMAKKGVVSGE----IDNDVWKQAVNVATGGVHDYNGM 755

Query: 618 SMLMPPRGMSKTDFEDRLW--YATKDTG---EYDPYTIKYMNVGSGKYMIIKNGNPKVDK 672
             ++ P GMS   F+ ++   +  +  G   +  P      + G  +Y++       +  
Sbjct: 756 GNVLLPWGMSAEQFDKQVNQAWNEQVVGSGIKTPPGQYGLQSYGDSQYLVKLGTGYLLKD 815

Query: 673 EGKTIIINV 681
           +G  +++N+
Sbjct: 816 DGSPVVLNL 824


>gi|327252173|gb|EGE63845.1| prophage MuMc02, structural protein P5 [Escherichia coli STEC_7v]
          Length = 837

 Score =  274 bits (701), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 71/429 (16%), Positives = 151/429 (35%), Gaps = 55/429 (12%)

Query: 290 KLRKETQAQARR-IDAQLNHGITV---------KPSELIPLEDYTQAYGVEQGTELYNLQ 339
           +LR++ QA+ +  ID+Q+                P E     D+  AYGV +G   Y   
Sbjct: 414 QLRRQQQAEYKTMIDSQVRDATAAYMRGVEFPNPPGEA----DFIAAYGVREGKLRYTEF 469

Query: 340 QFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQS 399
           +   +A   +   + M T     +++++  +         A+        + +  +  Q 
Sbjct: 470 RNTQIAGQYIGSFRNMPTSSITAYVEQLRPD-TGETGEGYAAR---AALYDNVVSAASQV 525

Query: 400 MQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEEN 459
           +++   D + + +   Q  P+    +++F  S+  RA  V  +   Y    + F+K E N
Sbjct: 526 IKQRQADPVQFSLAAGQAKPIDMSNKDNFGQSVALRAAQVSDLAKSYGTPLTFFSKDEAN 585

Query: 460 QLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVR---------- 509
           Q+       P S+    +       S    +   S+   I  N  SA V           
Sbjct: 586 QIGVFFRDAPVSQQAAYLDTIRQ--STGGGQVYMSALQQISANAPSAAVAGILMDKPGGI 643

Query: 510 ------LSSEFSDDAKNAAMVILSGMKHQKDT------ETRYNTDHKSNKFDSLYDSYIN 557
                  + + S   + AA  IL+G   +K T          + D +    D + D++  
Sbjct: 644 LAEKNWFNPDVSVSPETAAQTILAGAAARKGTDDAKGIPMPKDADLRLEFSDMVKDAFAG 703

Query: 558 TPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINE 617
                 + ++      KD  A  +   G +       ++      A+ +  G        
Sbjct: 704 ----DAQGASMAYEIAKDYYAGVMAKKGVVSGE----IDNDIWKQAVNVATGGVHDYNGM 755

Query: 618 SMLMPPRGMSKTDFEDRLW--YATKDTG---EYDPYTIKYMNVGSGKYMIIKNGNPKVDK 672
             ++ P GMS   F+ ++   +  +  G   +  P      + G  +Y++       +  
Sbjct: 756 GNVLLPWGMSAEQFDKQVNQAWNEQVVGTGIKTPPGQYGLQSYGDSQYLVKLGTGYLLKD 815

Query: 673 EGKTIIINV 681
           +G  +++++
Sbjct: 816 DGSPVVLDL 824


>gi|309702801|emb|CBJ02132.1| hypothetical phage protein [Escherichia coli ETEC H10407]
          Length = 836

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 79/474 (16%), Positives = 165/474 (34%), Gaps = 54/474 (11%)

Query: 235 STSLSDVSDSARERSLEVVEDVSKAIGLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKE 294
           +  LS +  S +  +     D +     A + R  D  R++  +    R N +++++R  
Sbjct: 377 AIGLSQLPTSTKRYTGNAAFDAASPEAQATFLRQADQIRKQ--QQAEYRTN-IDSRVRDA 433

Query: 295 TQAQARRIDAQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKL 354
           + A  R +D          P++     D+  AYGV +G   Y   +   +A   +   + 
Sbjct: 434 SAAYMRGVD------FPNAPTQ----NDFMAAYGVREGNLRYTEFRNTQIAGQYIGSFRN 483

Query: 355 MSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKY 414
           M T   +  ++ +  +         A+     +  + +  +    + +   D I + +  
Sbjct: 484 MPTSSIQAAVENLKPD-TGETGEGYAAR---AQTYDAVVSAASTVLAQRKADPIQFSLSS 539

Query: 415 KQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESV 474
            Q  P+    + +F+ ++  RA    ++   Y    + F+K E NQ+       P S+  
Sbjct: 540 GQTKPIDMTNQNNFSQTIALRASQAAELAKSYGTPLTFFSKDEANQIGAFFRDAPVSQQS 599

Query: 475 DLIRGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVR----------------LSSEFSDDA 518
             +       S    +   S+   I  N  SA V                  + + S   
Sbjct: 600 AYLDTIRQ--STGGGQVYMSALQQISTNAPSAAVAGILMDKPGGVVAEKNWFNPDVSVSP 657

Query: 519 KNAAMVILSGMKH------QKDTETRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNF 572
           ++AA  ILSG          K      + D +    D + D++          ++     
Sbjct: 658 ESAAQTILSGAAARKGTGDVKGIPMPKDNDLRLEFSDMVKDAFAG----DAHGASMAYEI 713

Query: 573 NKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDFE 632
            KD  A  +   G +       ++      A+ +  G          ++ P GMS   F+
Sbjct: 714 AKDYYAGVMAKKGVVSGE----IDSDTWKQAVNVATGGVHDYNGMGSVLLPWGMSAEQFD 769

Query: 633 DRLWYATK----DTG-EYDPYTIKYMNVGSGKYMIIKNGNPKVDKEGKTIIINV 681
            ++  A K    D G +  P      + G  +Y++       +  +G  ++I++
Sbjct: 770 KQVDQAWKTQVTDAGIKAPPGQYGLQSYGDSQYLVKLGTGYLLKDDGTPVVIDL 823


>gi|215487810|ref|YP_002330241.1| hypothetical protein E2348C_2743 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215265882|emb|CAS10291.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
          Length = 836

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 79/474 (16%), Positives = 166/474 (35%), Gaps = 54/474 (11%)

Query: 235 STSLSDVSDSARERSLEVVEDVSKAIGLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKE 294
           +  LS +  S +  +     D +     A + R  D  R++  +    R N +++++R  
Sbjct: 377 AIGLSQLPTSTKRYTGNAAFDAASPEAQATFLRQADQIRKQ--QQAEYRTN-IDSRVRDA 433

Query: 295 TQAQARRIDAQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKL 354
           + A  R +D          P++     D+  AYGV +G   Y   +   +A   +   + 
Sbjct: 434 SAAYMRGVD------FPNAPTQ----NDFLAAYGVREGNLRYTEFRNTQIAGQYIGSFRN 483

Query: 355 MSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKY 414
           M T   +  ++ +  +         A+     +  + +  +    + +   D I + +  
Sbjct: 484 MPTSSIQAAVENLKPD-TGETGEGYAAR---AQTYDAVVSAASTVLAQRKADPIQFSLSS 539

Query: 415 KQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESV 474
            Q  P+    + +F  ++  RA     +   Y    + F+K E NQ+       P S+  
Sbjct: 540 GQTKPIDMTNQNNFGQTISLRASQAVDLAKSYGTPLTFFSKEEANQIGAFFRDAPVSQQT 599

Query: 475 DLIRGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVR----------------LSSEFSDDA 518
             +       S    +   S+   I  N  SA V                  + + S   
Sbjct: 600 AYLDTIRQ--STGGGQVYMSALQQISTNAPSAAVAGILMDKPGGVVAEKNWFNPDVSVSP 657

Query: 519 KNAAMVILSGMKHQKDT------ETRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNF 572
           + AA  ILSG   +K T          + D +    D + D++        + ++     
Sbjct: 658 ETAAQTILSGAAARKGTDDAKGIPMPKDNDLRLEFSDMVKDAFAG----DAQGASMAYEI 713

Query: 573 NKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDFE 632
            KD  A  +   G +       ++      A+ +  G          ++ P GMS   F+
Sbjct: 714 AKDYYAGVMAKKGVVSGE----VDSDTWKQAVNVATGGVHDYNGMGSVLLPWGMSAEQFD 769

Query: 633 DRL--WYATKDTG---EYDPYTIKYMNVGSGKYMIIKNGNPKVDKEGKTIIINV 681
            ++   + T+ TG   +  P      + G  +Y++       +  +G  ++I++
Sbjct: 770 KQVDQAWKTQVTGAGIKAPPGQYGLQSYGDSQYLVKLGTGYLLKDDGTPVVIDL 823


>gi|304398392|ref|ZP_07380266.1| conserved hypothetical protein [Pantoea sp. aB]
 gi|304354258|gb|EFM18631.1| conserved hypothetical protein [Pantoea sp. aB]
          Length = 835

 Score =  252 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 81/474 (17%), Positives = 153/474 (32%), Gaps = 60/474 (12%)

Query: 259 AIGLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQAR-RIDAQLNHGIT-VKPSE 316
           A+GL   D           +  S +  A   +  K  Q +AR ++ AQL   I+  K S 
Sbjct: 372 ALGLTALDSPKRYTGNVAFDAASPQAQASYLRQAKSLQGEARTQLKAQLTDVISDAKASY 431

Query: 317 LIPLE--------DYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKID 368
           L  +E            AYG  +G + +   + + VA   +   + M +     ++  + 
Sbjct: 432 LKGVEYPNPPSQAQLISAYGYREGNQRFADLENQRVAGQYIGSFRNMPSSSITNYVADLK 491

Query: 369 DEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESF 428
            +  S      A    A    + +E + +Q +     +     +      P+        
Sbjct: 492 TQLGS--GEGFAGRADA---YDHVEAAAKQVISLRESNPYQAAMDMGAYKPIASTNPADI 546

Query: 429 ADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLV-KRPASESVDLIRGAYNTL--- 484
              ++ R     ++K    +     +K E   +  ++      ++S+ L++     L   
Sbjct: 547 TSEIKSRTAATDQLKS-LGINAPILSKEEAASISERVRGTTDVNQSISLLQSFGRDLQPQ 605

Query: 485 ----------SDSDKEGVRSSFAHIEDN---GLSAVVRLSSEFSDDAK----NAAMVILS 527
                      DS      +     +DN     S  +  S   S          A  IL 
Sbjct: 606 ALRSVAASIAPDSAATAYSALILGTDDNQYNNRSPSIPYSQFVSYKPTMNKYEVAKTILQ 665

Query: 528 G------MKHQKD-----TETRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDK 576
           G       K QKD      +   +   K    D + +++ + P  +        +  K  
Sbjct: 666 GDQLINPTKAQKDAGISAVKLPADDKLKQTFDDEIGNAFSHNPQAR----QMAWSIYKSA 721

Query: 577 EAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDFEDRLW 636
            A   Y  G         ++      A+Q+  G      N   ++ P GM K+ F+DR  
Sbjct: 722 YAGLAYTSGDSDGVNTKAVDSDIAEKAIQMATGGVIKGFNGGDVVMPFGMDKSTFKDRYT 781

Query: 637 YATKD---TGEYDPYTIKY---MNVGSGKYMIIKNGNPKVD--KEGKTIIINVE 682
            A  +   +   +P        +NVG  +Y ++          K G  I + V+
Sbjct: 782 AAAGEALKSAGLNPAAQSNFIPVNVGDSQYRLVTGSGRWATDPKTGAPITVRVQ 835


>gi|330007166|ref|ZP_08305908.1| hypothetical protein HMPREF9538_03597 [Klebsiella sp. MS 92-3]
 gi|328535513|gb|EGF61973.1| hypothetical protein HMPREF9538_03597 [Klebsiella sp. MS 92-3]
          Length = 838

 Score =  241 bits (615), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 96/545 (17%), Positives = 196/545 (35%), Gaps = 78/545 (14%)

Query: 190 LKQKLLSEAKEKLNT-NQIIG--AHARDPRVFENFMRAFYKKGH-PPKDSTSLSDVSDSA 245
           L + LLS  ++  +T ++I+   A A D    E ++ A  KK +  P D  ++SD+ ++ 
Sbjct: 288 LGKNLLSYQRQGYDTVSEIVNRWAPASDGNNTEAYIAALCKKLNVTPNDQLNMSDI-NTL 346

Query: 246 RERSLEVVED---------------VSKAIGLAGWDRLDDTKRRRLLEHLSSRDNALNTK 290
           R+    +++                VS A+GL   +        +  +  S +  A   +
Sbjct: 347 RQLCAGIIQHENGKQPYSEDQLNTGVSAALGLTTLESPKRYSGNQAFDAASPQQQAAYLR 406

Query: 291 LRKETQAQAR-RIDAQLNHGI---TVKPSELIPLE------DYTQAYGVEQGTELYNLQQ 340
              E + QAR +  AQL   +   T    + I  +      D+  A+G  +GT+ +N  +
Sbjct: 407 QSMELRNQARTQFKAQLVDQVQDATAAYLKGIQFDNPPSQGDFINAFGYREGTQRFNDFE 466

Query: 341 FKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSM 400
              VA   +   + M T   ++++  + ++  +     LA    A    + ++ + ++ +
Sbjct: 467 NLRVAGQYIGSFRTMPTASIQQYVSDLKNQVGN--GEGLAGRAAA---FDHVQAAAQRII 521

Query: 401 QELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQ 460
            +   D     +      P+   T ++ A  ++ R     ++K    +T    +K E   
Sbjct: 522 SQRQSDPFQSAVDIGAYKPISNSTPDAIASEVKNRYAAQDQLK-AIGITPPLLSKQESQV 580

Query: 461 LRTQLV-KRPASESVDLIRGAYNTLS-------------DSDKEGVRSSFAHIEDN---G 503
           L   +      ++++ L++G   TL               S      +     +DN    
Sbjct: 581 LTDAVRNSTDVNQAISLLQGLGRTLPPQALRSVASSIAPGSPGTAYAALLLGQQDNQYDN 640

Query: 504 LSAVVRLSSEFSDDAK----NAAMVILSG------MKHQKD-----TETRYNTDHKSNKF 548
            S ++  S   S        + A  +L+G       K  KD          +   K+   
Sbjct: 641 RSGIIPYSQFVSYKPTLDKYDVAKTVLAGDQMLNPTKAMKDAGISAVSIPSDEKLKTYFD 700

Query: 549 DSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVL 608
             + +++  +   +           +   A   Y  G    +   + +      A Q   
Sbjct: 701 KEVGNAFAYSAQAR----QVAWGNFRSAYAALAYQSGDASKTNTVSPDSDIAEKAAQYAT 756

Query: 609 GNTPVNINESMLMPPRGMSKTDFEDRLWYATKD------TGEYDPYTIKYMNVGSGKYMI 662
           G     +N S ++ P GM KT F DR   A ++               K +NVG+ +Y +
Sbjct: 757 GGVYKGLNGSDVVMPFGMDKTTFRDRYTAAGREAMTQAGLNPSSLENFKAVNVGNNQYRL 816

Query: 663 IKNGN 667
           +    
Sbjct: 817 VNGSG 821


>gi|50282929|ref|YP_052985.1| hypothetical protein VP2p17 [Vibrio phage VP2]
          Length = 694

 Score =  240 bits (611), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 88/459 (19%), Positives = 159/459 (34%), Gaps = 75/459 (16%)

Query: 261 GLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQA--------RRIDAQLNHGITV 312
           G AG   L++ +R   ++ L +R N +N +     Q +         R IDA L  G  V
Sbjct: 245 GYAG--ELNEPQRLATIDQLKARINLVNKRNEASYQGRLTLLGVEVDRTIDA-LESGEMV 301

Query: 313 KPSELIPLEDYTQAYGVEQG---------TELYNLQQFKSVAAPDVARIKLMSTFDAKKF 363
            P     L    QA   + G          +        +  +PD+ + K     + +  
Sbjct: 302 SPQHQARLFAQIQA-AKDAGLISSEDSSWVKRTAFFSEAATYSPDLVQFKSKPLQEQEAV 360

Query: 364 LQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQID--PLR 421
           ++++          + A +       +I  K+H  +   LN D + +G +   ID  P  
Sbjct: 361 IREMR---------NSAVSGSDYHKLDIYTKNHENAKSMLNSDPLMYGAQTGIIDLQPFD 411

Query: 422 FDTEESFADSLRQRAGFVKKIKDDYNLTT--SHFNKTEENQLRTQLVKRPASESVDLIRG 479
           F      A SL +R   V  +K  Y  +   + F K E  +    +   P  + + ++  
Sbjct: 412 FADP---AASLVKRQNDVASMKSQYGDSMVPAFFTKQEAMEFSRVVQDAPVKDQMRMLSI 468

Query: 480 AYNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRY 539
               LS  +   VRS    +  NG   +   S     +    A  IL G    K+    +
Sbjct: 469 INGQLSKDNANAVRS---QLMGNGGGVLAVASDALDSNQPYVAEKILMGRNALKEVPEAF 525

Query: 540 ---NTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNY--T 594
              +TD        + ++Y  +P T            +  E+IK        + G++  T
Sbjct: 526 KSWDTDASPLVLSEIGNAYSASPAT----------MGQVMESIKAAYAAQTVNEGDFSGT 575

Query: 595 LNRVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDFEDRLWYATKD----TGEYDPYT- 649
           +N  R+   ++ V G      + +++ P R M +  F+  L           G    Y  
Sbjct: 576 INSKRLKSVIKEVTGGLIKIGSSTIVSPDRNMDENKFDSWLRDVQPKYLDTLGGVKGYNG 635

Query: 650 ---------------IKYMNVGSGKYMIIKNGNPKVDKE 673
                          +  +NVG  KY++       V ++
Sbjct: 636 RAGVMALHTQVSNGDVTMVNVGKDKYLLRGENGFLVKRD 674


>gi|50282962|ref|YP_053018.1| hypothetical protein VP5_gp16 [Vibrio phage VP5]
          Length = 694

 Score =  240 bits (611), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 88/459 (19%), Positives = 159/459 (34%), Gaps = 75/459 (16%)

Query: 261 GLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQA--------RRIDAQLNHGITV 312
           G AG   L++ +R   ++ L +R N +N +     Q +         R IDA L  G  V
Sbjct: 245 GYAG--ELNEPQRLATIDQLKARINLVNKRNEASYQGRLTLLGVEVDRTIDA-LESGEMV 301

Query: 313 KPSELIPLEDYTQAYGVEQG---------TELYNLQQFKSVAAPDVARIKLMSTFDAKKF 363
            P     L    QA   + G          +        +  +PD+ + K     + +  
Sbjct: 302 SPQHQARLFAQIQA-AKDAGLISSEDSSWVKRTAFFSEAATYSPDLVQFKSKPLQEQEAV 360

Query: 364 LQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQID--PLR 421
           ++++          + A +       +I  K+H  +   LN D + +G +   ID  P  
Sbjct: 361 IREMR---------NSAVSGSDYHKLDIYTKNHENAKSMLNSDPLMYGAQTGIIDLQPFD 411

Query: 422 FDTEESFADSLRQRAGFVKKIKDDYNLTT--SHFNKTEENQLRTQLVKRPASESVDLIRG 479
           F      A SL +R   V  +K  Y  +   + F K E  +    +   P  + + ++  
Sbjct: 412 FADP---AASLVKRQNDVASMKSQYGDSMVPAFFTKQEAMEFSRVVQDAPVKDQMRMLSI 468

Query: 480 AYNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRY 539
               LS  +   VRS    +  NG   +   S     +    A  IL G    K+    +
Sbjct: 469 INGQLSKDNANAVRS---QLMGNGGGVLAVASDALDSNQPYVAEKILMGRNALKEVPEAF 525

Query: 540 ---NTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNY--T 594
              +TD        + ++Y  +P T            +  E+IK        + G++  T
Sbjct: 526 KSWDTDASPLVLSEIGNAYSASPAT----------MGQVMESIKAAYAAQTVNEGDFSGT 575

Query: 595 LNRVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDFEDRLWYATKD----TGEYDPYT- 649
           +N  R+   ++ V G      + +++ P R M +  F+  L           G    Y  
Sbjct: 576 INSKRLKSVIKEVTGGLIKIGSSTIVSPDRNMDENKFDSWLRDVQPKYLDTLGGVKGYNG 635

Query: 650 ---------------IKYMNVGSGKYMIIKNGNPKVDKE 673
                          +  +NVG  KY++       V ++
Sbjct: 636 RAGVMALHTQVSNGDVTMVNVGKDKYLLRGENGFLVKRD 674


>gi|317120711|gb|ADV02533.1| hypothetical protein SC2_gp045 [Liberibacter phage SC2]
 gi|317120772|gb|ADV02593.1| hypothetical protein SC2_gp045 [Candidatus Liberibacter asiaticus]
          Length = 753

 Score =  164 bits (416), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 136/723 (18%), Positives = 283/723 (39%), Gaps = 58/723 (8%)

Query: 16  PNQDAVRDSVNPQAGLRDLGDALGKATQFL-EGIRRDNAFATANTRYTELSFKAVQDFHD 74
           P ++ V+   +P  GLRD+ + L ++T+ + E +RR +AF  A++ + + + +A + F++
Sbjct: 16  PVKEHVQQRYSPDEGLRDIANKLNQSTKLIEETVRRQSAF-KADSEFLQTTVEAEKVFNE 74

Query: 75  FTNSLDTRDSLQAGDKIKEYVDGRIRSAYDRFLSSISHRDVRKKFQAQVEHDIRDYHTKG 134
               L   +  +    ++  +   I+  Y +    + + +VR+    Q    +  +  K 
Sbjct: 75  KLQGLQGGNEEEVKKNLESILSNDIKPLYGKMHEKLDYPEVRRHILQQSNKQMARFQLKA 134

Query: 135 VDIQIGATQRAQEDNLNMTVGLAAAHVLHDPSNENYFQRVQSITDHINSLPIDLRLKQKL 194
            + ++G   +  E+ +       +  +L D S+ NY ++VQ  +D I+ LP++   K   
Sbjct: 135 NEYKLGFQVQRTEEGIREIERSVSNSLLLDGSDSNYREKVQFASDAIDKLPLNPTTKDAR 194

Query: 195 LSEAKEKLNTNQIIGAHARDPRVFENFMRAFYKKGHPPKDSTSLSDVSDSARERSLEVVE 254
               +E     Q       +P+VF +F++    +G    D ++++D+ D+    +  V +
Sbjct: 195 RRTTRENAALAQAQRYMVDNPQVFSSFIQKREGQGSKIDDKSTIADIVDNTPLDTFSVND 254

Query: 255 DVSKAIG-LAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQARRIDAQLNHGITVK 313
            V        GW  L   K+  +L+ +++       + R     + + I + L  GIT K
Sbjct: 255 TVVDNTNPFEGWKDLSTQKKIAILKEVANASTTGKQEERSRVGTKIKNIASFLERGITPK 314

Query: 314 PSELIPL--EDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEY 371
             +   L  ++    +G  +G  L +  Q     AP + +I LM     +  L K+  + 
Sbjct: 315 NIQDADLSEDNLRHLFGNTRGQMLSSQLQTLKEFAPKINQIFLMPNDQVETELTKLKPDV 374

Query: 372 ISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADS 431
                 +L       K      K+  ++ +E  +  I W I +     +  D    + D 
Sbjct: 375 -----QNLVGAEFKNKLYSDGVKAVYKNDKERKEHPIKWAITHGLTQEMP-DEPSKWGDF 428

Query: 432 LRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAY---NTLSDSD 488
              R    + +K  Y +++   +K E  +L   L K  + + V  +         L +S 
Sbjct: 429 FVHRREVSQTLKGFYGVSSPLISKEESRKLTQYLDKLESKDVVSHLEDYAERLGGLKNSV 488

Query: 489 KEGVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSG-----MKHQKDTE----TRY 539
                 S  H     +  +++       D  + A  +L G         ++       R+
Sbjct: 489 WIEAMQSLEHPVMGEVGLLLK-------DDPDVASDVLRGYKYRVRNRGENIRDITGERF 541

Query: 540 NTDHKSNKFDSLYDSYIN---------TPLTKLEQSTAGGNFNKDK-----EAIKLYLLG 585
           +   K    +   + + +            +KL      G    DK     EA    L  
Sbjct: 542 DAWFKERFREKYGNVFASIGDYGDAEFDRASKLVGYHLAGELLSDKTYSFHEAPTQSLKE 601

Query: 586 SMKDSGNYTLNRVRVSDAMQIVLGNTPVNIN--ESMLMPPRGMSKTDFEDRLWYATKDT- 642
            +        ++  +  + + V+GN PV +   +S L+PPRGMS  DF ++     +   
Sbjct: 602 WVLRQPASQYDKN-LQHSFEAVVGNIPVPMGDFKSPLIPPRGMSSEDFTNKFTAVAQQVF 660

Query: 643 -------GEYDPYTIKYMNVGSGKYMIIKNGNPKVD-KEGKTIIINVE--DVNRDERMES 692
                   EY    I   + GS +Y++        + K G  ++I V    +  ++ ++ 
Sbjct: 661 EESGLSGKEYGYENIGPTSDGSAQYLVKFGREYIHNPKTGAPLVIEVSPYSIEHEQTIQK 720

Query: 693 TIR 695
           T++
Sbjct: 721 TLK 723


>gi|315122890|ref|YP_004063379.1| hypothetical protein CKC_05730 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496292|gb|ADR52891.1| hypothetical protein CKC_05730 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 583

 Score =  156 bits (393), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 138/554 (24%), Positives = 248/554 (44%), Gaps = 25/554 (4%)

Query: 147 EDNLNMTVGLAAAHVLHDPSNENY-FQRVQ--SITDHINSLPIDLRLKQKLLSEAKEKLN 203
           E ++  T    A ++   P+NEN   QR +   + D     P D   K++ L +    L+
Sbjct: 6   EKHIGDTAVALALNIRLSPTNENLELQRNRGYDVIDKSLLTPEDKVKKKQALDKT---LH 62

Query: 204 TNQIIGAHARDPRVFENFMRAFYKKGHPPKDSTSLSDVSDSARERSLEVVE-DVSKAIGL 262
            +Q IG  + +P +  N     Y      KD  S   ++++A   ++E+ E  +    G 
Sbjct: 63  KSQTIGLLSNEPDIVGNLSSLVYGSPVAVKDGLSPDQIAENADGGTIEIDEHKLDGKTGY 122

Query: 263 AGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQARRIDAQLNHG-ITVKPSELIPLE 321
            G D L     + LL+  + + NA     +K      +    + N G I+    E+    
Sbjct: 123 TGIDSLSREDLKSLLDEHNRKTNAERQSGKKRVIETIKLRTTEANKGNISSDYDEVFSES 182

Query: 322 DYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEY-ISNPSLSLA 380
           + ++ Y       +    + K   AP +  ++ M+  +  +F+  ++      + +    
Sbjct: 183 NLSRYYQPADVESIITQAKLKKDIAPYIRVVETMTNEEYAEFVSTVNSRTVDYDLNDRFK 242

Query: 381 STMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVK 440
           +     + ++    S    ++EL++D   W      + P         A S+       +
Sbjct: 243 AQAFLKELQDKRVAS----LKELSKDPHGWQRSRGLVPPNLSLEAGQLASSVLPIFDANE 298

Query: 441 KIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIR--GAYNTLSDSDKEGVRSSFAH 498
           K + D+ +        +E QL  ++    A + V   R       ++ SD E ++S    
Sbjct: 299 KTEKDHGVIVKGMGTDKERQLSEKIKGERAEDFVSYFRDEMTKEGVTKSDIEKIKSVVDG 358

Query: 499 IEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYNTDHKSNKFDSLYDSYINT 558
           ++D   S++ RL+   S +A+ +A+ ++SG+KH+ D E +  +  K N    L+++ IN 
Sbjct: 359 MKDKVTSSICRLAMSDSAEARASAIPVISGVKHRGDIELKLESS-KGNGVKKLFNNLINK 417

Query: 559 PLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINES 618
            + +L Q +   N+ +D E IKLY++G+M  +GNYTLN   V DA++ V GNT   +N S
Sbjct: 418 EIGQLYQGSEDANYKQDAEVIKLYIMGNMHKTGNYTLNGEVVRDAVKAVFGNTAYAVNGS 477

Query: 619 MLMPPRGMSKTDFEDRLWYATKD-----TGEYD----PYTIKYMNVGSGKYMIIKNGNPK 669
            +MPPRGMS  +F +RL   T D      G+      P +  Y + G GKY +   G  K
Sbjct: 478 YVMPPRGMSHYEFGNRLHGLTSDKLVGLFGDKSKDRYPESYGYQSEGDGKYSLTVGGVYK 537

Query: 670 VDKEGKTIIINVED 683
            DK+G  I+IN+ D
Sbjct: 538 KDKQGNPIVINIYD 551


>gi|315121928|ref|YP_004062417.1| hypothetical protein CKC_00890 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495330|gb|ADR51929.1| hypothetical protein CKC_00890 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 547

 Score =  147 bits (370), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 134/547 (24%), Positives = 242/547 (44%), Gaps = 25/547 (4%)

Query: 147 EDNLNMTVGLAAAHVLHDPSNENY-FQRVQ--SITDHINSLPIDLRLKQKLLSEAKEKLN 203
           E ++  T    A ++   P+NEN   QR +   + D     P D   K++ L +    L+
Sbjct: 6   EKHIGDTAVALALNIRLSPTNENLELQRNRGYDVIDKSLLTPEDKVKKKQALDKT---LH 62

Query: 204 TNQIIGAHARDPRVFENFMRAFYKKGHPPKDSTSLSDVSDSARERSLEVVE-DVSKAIGL 262
            +Q IG  + +P +  N     Y      KD  S   ++++A   ++E+ E  +    G 
Sbjct: 63  KSQTIGLLSNEPDIVGNLSSLVYGSPVAVKDGLSPDQIAENADGGTIEIDEHKLDGKTGY 122

Query: 263 AGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQARRIDAQLNHG-ITVKPSELIPLE 321
            G D L     + LL+  + + NA     +K      +    + N G I+    E+    
Sbjct: 123 TGIDSLSREDLKSLLDEHNRKTNAERQSGKKRVIETIKLRTTEANKGNISSDYDEVFSES 182

Query: 322 DYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEY-ISNPSLSLA 380
           + ++ Y       +    + K   AP +  ++ M+  +  +F+  ++      + +    
Sbjct: 183 NLSRYYQPADVESIITQAKLKKDIAPYIRVVETMTNEEYAEFVSTVNSRTVDYDLNDRFK 242

Query: 381 STMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVK 440
           +     + ++    S    ++EL++D   W      + P         A S+       +
Sbjct: 243 AQAFLKELQDKRVAS----LKELSKDPHGWQRSRGLVPPNLSLEAGQLASSVLPIFDANE 298

Query: 441 KIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIR--GAYNTLSDSDKEGVRSSFAH 498
           K + D+ +        +E QL  ++    A + V   R       ++ SD E ++S    
Sbjct: 299 KTEKDHGVIVKGMGTDKERQLSEKIKGERAEDFVSYFRDEMTKEGVTKSDIEKIKSVVDG 358

Query: 499 IEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYNTDHKSNKFDSLYDSYINT 558
           ++D   S++ RL+   S +A+ +A+ ++SG+KH+ D E +  +  K N    L+++ IN 
Sbjct: 359 MKDKVTSSICRLAMSDSAEARASAIPVISGVKHRGDIELKLESS-KGNGVKKLFNNLINK 417

Query: 559 PLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINES 618
            + +L Q +   N+ +D E IKLY++G+M  +GNYTLN   V DA++ V GNT   +N S
Sbjct: 418 EIGQLYQGSEDANYKQDAEVIKLYIMGNMHKTGNYTLNGEVVRDAVKAVFGNTAYAVNGS 477

Query: 619 MLMPPRGMSKTDFEDRLWYATKD-----TGEYD----PYTIKYMNVGSGKYMIIKNGNPK 669
            +MPPRGMS  +F +RL   T D      G+      P +  Y + G GKY +   G  K
Sbjct: 478 YVMPPRGMSHYEFGNRLHGLTSDKLVGLFGDKSKDRYPESYGYQSEGDGKYSLTVGGVYK 537

Query: 670 VDKEGKT 676
            DK+G  
Sbjct: 538 KDKQGHP 544


>gi|293609611|ref|ZP_06691913.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828063|gb|EFF86426.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 683

 Score = 96.4 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 69/445 (15%), Positives = 151/445 (33%), Gaps = 51/445 (11%)

Query: 233 KDSTSL-SDVSDSARERSLEVVEDVSKAIGLAGWDRLDDTKRRRLLEHLSSRDNALNTKL 291
           +D T + S ++ +  + S+E +++V  A GL  +  +D +  ++    + S+   L    
Sbjct: 203 RDITDINSRITTAIAQNSVEGLQEV--ATGLKDYKFIDGSAVQKFQTEIQSKITTLQQ-- 258

Query: 292 RKETQAQARRIDAQ------LNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVA 345
           R++ Q   R  +A+      +   +T +P ++    D  QA    +GT      QF    
Sbjct: 259 RQQVQENKRINEAEKVVNEFIQSTLTGRPLDMRYQNDVEQAV---KGTPSEAEYQFYKKQ 315

Query: 346 APDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQ 405
           + D  R + ++T      +     +  ++ S   A+ +   K     +  +   ++   +
Sbjct: 316 SADFMRFQGLTTDQQLAEINSRKAKMKNSSS---ANPVAENKILSTYQSIYDNKLKTAKE 372

Query: 406 DAISW----GIKYKQIDPLRFD-TEESFADSLRQRAGF-VKKIKDDYNLTTSHFNKTEEN 459
           +        GI+  +++PL        FA ++     + V +   D N T          
Sbjct: 373 NPTQALREKGIELPEVNPLTLKVNPSDFAKNIVTIGSYQVAQRDKDPNATIKPIPNEALP 432

Query: 460 QLRTQLVKRPASESVDLIRGAYNTLS--DSDKEGVRSSFAHIEDNGLSA-----VVRLSS 512
             +    +   ++ +DLI    N      +  +    +   +  NG +A       R ++
Sbjct: 433 AAKQAWEEANVNQKLDLISSMINQTKGVKNGAKIWGEALGQL-GNGDAAYQMAGYARANN 491

Query: 513 EFSDDAKNAAMVILSGMKHQKDTET--RYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGG 570
             SD   + A  I++G +  K+ +     +   K      +  S         E +    
Sbjct: 492 FRSDAGLDVATAIVAGKQALKNKQMIQPKDALLKEKFNQYVGQSVSG------ETANLNY 545

Query: 571 NFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTP-----------VNINESM 619
              +   A      G      +          A+ +  G                I++  
Sbjct: 546 AAFQSIYAYLTEARGQTHKDAD-EYKEDIGRTALGLATGGVYTQSGRFKDYTDRGISDWK 604

Query: 620 LMPPRGMSKTDFEDRLWYATKDTGE 644
           +  P GM    FE ++     D  +
Sbjct: 605 VSKPYGMKDETFEAKIQKGYADISK 629


>gi|319793415|ref|YP_004155055.1| hypothetical protein Varpa_2746 [Variovorax paradoxus EPS]
 gi|315595878|gb|ADU36944.1| hypothetical protein Varpa_2746 [Variovorax paradoxus EPS]
          Length = 732

 Score = 91.4 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 64/403 (15%), Positives = 132/403 (32%), Gaps = 65/403 (16%)

Query: 331 QGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKE 390
           +GT              D  ++  M   D ++++Q  + E +     +LA      + K 
Sbjct: 316 EGTPYAEDFNRLVKQERDTQQVLRMPMADQQRYIQTREAE-LQQAGGTLADRANLQRIKA 374

Query: 391 ILEKSHRQSMQELNQDAISWGIKY--KQIDPLRFDT------EESFADSLRQRAGFVKKI 442
            +E +     ++L  + +    +   + + PL  +           A     RA  +  +
Sbjct: 375 TVENNA----KQLADEPLVAAQRLFGRAVQPLDPNDLLQPGGAGRAAGIFADRAATLAAM 430

Query: 443 KDDYNLTTSH--FNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHI- 499
           +  Y            E   L   +     +++  L       ++D D    R+    I 
Sbjct: 431 QKQYGSQVGTKPLLPQEAGLLVKAIDSAGPADANQLFGTLRGAINDDD--TYRAVMQQIA 488

Query: 500 EDNGLSAV---------------------VRLSSEFSDDAKNAAMVILSGMKHQKDTE-- 536
            D+ + A                      VR+SS    +   A  +IL+  K QK  +  
Sbjct: 489 PDSPVKARAGMLTAIDRPVTIQSNLIASDVRVSSAKVAETMLAGEIILNKTKGQKQVDGQ 548

Query: 537 -----TRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSG 591
                     D  +   DS+ + Y + P  +     A           K   LG +  + 
Sbjct: 549 AHSLFVPARQDFSTAFVDSVGNLYRSRPGAQEGDLQAAF----AYYVGKSAELGRLASTP 604

Query: 592 NYTLNRVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDFEDRLWYATKD---------- 641
              ++   V +A+   +G+      +     P GM+ +D + +L     +          
Sbjct: 605 KD-IDSTLVKEAITATIGDVVDVNGQGKAKAPIGMTGSDMQAKLRERFSEMVKEQDMPPS 663

Query: 642 -TGEYDPY-TIKYMNVGSGKYMIIKNGNPKVDKEGKTIIINVE 682
               ++ Y  I Y     G+YM+   G P + K G  ++++++
Sbjct: 664 AVASFEHYGVINYRR--DGQYMLTLGGAPVLGKGGAPLVVDLD 704


>gi|169795394|ref|YP_001713187.1| hypothetical protein ABAYE1265 [Acinetobacter baumannii AYE]
 gi|169148321|emb|CAM86186.1| hypothetical protein ABAYE1265 [Acinetobacter baumannii AYE]
          Length = 683

 Score = 90.2 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 61/433 (14%), Positives = 145/433 (33%), Gaps = 44/433 (10%)

Query: 233 KDSTSL-SDVSDSARERSLEVVEDVSKAIGLAGWDRLDDTKRRRLLEHLSSRDNALNTKL 291
           +D T + S ++++  E S+E +++V  A  L  +  ++    ++    + S+   L  + 
Sbjct: 203 RDITDIQSKITNAISENSVEGLQEV--ATSLKDYKFINGQAVQKFQTEIQSKITTLQQRQ 260

Query: 292 RKETQAQARRIDAQLN----HGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAAP 347
           + +   +    +  LN    + +T +P +L    +  +A    +GT       F +  + 
Sbjct: 261 QVQENKRINEAEKVLNEYKQNVLTGRPMDLTYQTNVEKAV---KGTPSETEYNFYTKQSS 317

Query: 348 DVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDA 407
           D  R + +ST      + K      ++ S   A  +   K     +  +   ++   ++ 
Sbjct: 318 DFLRFQKLSTDQQLAEINKRKANMKNSSS---ADAVAENKILATYQSIYDNKLKTAKENP 374

Query: 408 ISW----GIKYKQIDPLRFD-TEESFADSLRQRAGF-VKKIKDDYNLTTSHFNKTEENQL 461
                  GI+  +++PL        FA ++     + V +   D N T            
Sbjct: 375 TQALREKGIELPEVNPLTLKVNPSDFAKNIVTIGSYQVAQRDKDPNATIKPIPNEALPAA 434

Query: 462 RTQLVKRPASESVDLIRGA---YNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDA 518
           +    +    + ++LI         + D  K    +       N    +  ++      +
Sbjct: 435 KQAWEEATVDQKLNLISSMIAQTKGVKDGVKIWGAALGQLGGGNSNYVMAGVAKANGYRS 494

Query: 519 KN---AAMVILSGMKHQKDTET--RYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFN 573
                 A  I+ G +  K+ +       D +      +  +   T       +       
Sbjct: 495 TEGRELANSIVIGTQLLKNKQLIMPKEDDMREAFNKYVGQTLTGT------NANNAYEVF 548

Query: 574 KDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTP-----------VNINESMLMP 622
           K   A  +   G    S +   N+  ++ A+ +  G                +++  +  
Sbjct: 549 KAVYADTMNERGFSHSSKDEAPNKKILNTALGMATGGVYTQPTSFRNYRGDKVSDWKVTK 608

Query: 623 PRGMSKTDFEDRL 635
           P G++   FE +L
Sbjct: 609 PYGITDDAFEAQL 621


>gi|332875214|ref|ZP_08443047.1| putative methyl-coenzyme M reductase, alpha subunit [Acinetobacter
           baumannii 6014059]
 gi|332736658|gb|EGJ67652.1| putative methyl-coenzyme M reductase, alpha subunit [Acinetobacter
           baumannii 6014059]
          Length = 680

 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 64/443 (14%), Positives = 149/443 (33%), Gaps = 47/443 (10%)

Query: 233 KDSTSL-SDVSDSARERSLEVVEDVSKAIGLAGWDRLDDTKRRRLLEHLSSRDNALNTKL 291
           +D T + S ++ +  + S+E +++V  A GL  +  ++    ++    + S+   L+ + 
Sbjct: 200 RDITDINSRITTAIAQNSVEGLQEV--ATGLKDYKFINGQAVQKFQTEIQSKITTLHQRQ 257

Query: 292 RKETQAQARRIDAQLN----HGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAAP 347
           + +   +    +  LN    + +T +P +L    +  +A    +GT       F +  + 
Sbjct: 258 QVQENKRINEAEKVLNEYKQNVLTGRPMDLTYQTNVEKAV---KGTPSETEYNFYTKQSS 314

Query: 348 DVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDA 407
           D  R + +ST      + K      ++ S   A  +   K     +  +   ++   ++ 
Sbjct: 315 DFLRFQKLSTDQQLAEINKRKANMKNSSS---ADAVAENKILATYQSIYDNKLKTAKENP 371

Query: 408 ISW----GIKYKQIDPLRFD-TEESFADSLRQRAGF-VKKIKDDYNLTTSHFNKTEENQL 461
                  GI+  +++PL       +FA ++     + V +   D N T            
Sbjct: 372 TQALREKGIELPEVNPLTLKVNPSAFAKNIVTIGSYQVAQRDKDPNATIKPIPNEALPAA 431

Query: 462 RTQLVKRPASESVDLIRGAYNTLS--DSDKEGVRSSFAHIEDNGLSA-----VVRLSSEF 514
           +    +    + ++LI           +  +    +   +  NG +A       R ++  
Sbjct: 432 KQAWEEATVDQKLNLISSMIAQTKGIKNGAKIWGEALGQL-GNGDAAYQMAGYARANNFR 490

Query: 515 SDDAKNAAMVILSGMKHQKDTET--RYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNF 572
           SD   + A  I++G +  K+ +     +   K      +  S         E +      
Sbjct: 491 SDAGLDVATAIVAGKQALKNKQMIQPKDALLKEKFNKYVGQSVSG------ETANLNYAA 544

Query: 573 NKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTP-----------VNINESMLM 621
            +   A      G      +          A+ +  G                I++  + 
Sbjct: 545 FQAIYAYLTEARGQTHKDAD-EYKEEIGRTALGLATGGVYTQSGRFKDYTDRGISDWKVS 603

Query: 622 PPRGMSKTDFEDRLWYATKDTGE 644
            P GM+   FE ++     D  +
Sbjct: 604 KPYGMTDATFEAKIQKGYADISK 626


>gi|298485993|ref|ZP_07004067.1| Structural protein P5 [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298159470|gb|EFI00517.1| Structural protein P5 [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 679

 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 51/397 (12%), Positives = 124/397 (31%), Gaps = 48/397 (12%)

Query: 267 RLDDTKRRRLLEHLSSRDNALNTKLRKETQAQAR---------RIDAQLNHGITVKPSEL 317
           +LD  KR +LL  ++ R      K   E QA+ R         ++D Q   GI   P+  
Sbjct: 243 KLDPEKRTQLLNTITGR--IYQIKEHNERQAEIRENKAERALTQMDRQAATGIPPTPA-- 298

Query: 318 IPLEDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSL 377
               D  +   +  GT      + +     +V  +        ++++ +   +  +N   
Sbjct: 299 ----DQQRWQSLVSGTSAAGEFKERINQMAEVQGLLRQPIEAQQQYVDQKRQQMAANGG- 353

Query: 378 SLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKY--KQIDPLRFDT------EESFA 429
            +A           L+ +   +++ +  D +S+        ++PL          +++  
Sbjct: 354 GVAEQANL----NRLQSAIDTNVKLMKTDPLSFSALRTGSDVEPLDLSQIGTTEGQQALG 409

Query: 430 DSLRQRAGFVKKIKDDYNLTTSH--FNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDS 487
           + +  R      ++  Y    S   F   E   ++           + ++         +
Sbjct: 410 EQIASRFDVTNAVRKKYGPEVSRVPFKAQELEAIKAGYEAADDKTKIGILAAVGGAAP-T 468

Query: 488 DKEGVRSSFAHIEDNGLSAVVRLSSEFSDDA---KNAAMVILSGMKHQKD--TETRYNTD 542
             +   +  A   +  ++ +  ++      A    + A  ++ G K  KD    T  ++ 
Sbjct: 469 GPDAAAAIKAIAPEQPITLLAGMAQYRGLKAADGTDVAKTLMVGSKILKDKSVATPEDSV 528

Query: 543 HKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSD 602
            +++    + ++       +           K   A      G   D     ++      
Sbjct: 529 MQASFESIVGNAMPGGTQQR----EHAYTGFKAIYAGLAEASGKRYDPAVKDVDGALAKK 584

Query: 603 AMQIVLGNTPVN------INESMLMPPRGMSKTDFED 633
           A  ++ G            +   ++ P GM    F+ 
Sbjct: 585 AADMITGGVTTRGGGWFSGSSYKVIKPYGMDDDAFDK 621


>gi|332160977|ref|YP_004297554.1| Hypothetical structural protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665207|gb|ADZ41851.1| Hypothetical structural protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330862133|emb|CBX72297.1| hypothetical protein YEW_AK02340 [Yersinia enterocolitica W22703]
          Length = 708

 Score = 84.1 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 68/459 (14%), Positives = 156/459 (33%), Gaps = 68/459 (14%)

Query: 266 DRLDDTKRRRLLEHLSSRDNALNTKLR---KETQAQARRIDAQLNHGITVK-PSELIPLE 321
           D+LD  KR  LL    S    L  + +      +A+A R  ++    I++  P+     E
Sbjct: 234 DKLDPEKRNELLNQSMSYQVTLENRAQVAAARREAKAGRAFSEFERQISMDLPTTA---E 290

Query: 322 DYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLAS 381
                    +GT +    +        +  +       A+ ++ ++     +N       
Sbjct: 291 QQVNLISATKGTAVEADVKDLLANQVKIREVISQGPLAAQNYVNELSANLTTNGGD---- 346

Query: 382 TMMATKYKEILEKSHRQSMQELNQDAISWGIKY--KQIDPLRF----------------- 422
            M   +  ++L  + ++S ++L    +++      + + PL                   
Sbjct: 347 -MKQWRNLQLLNTAVQKSNKQLMDSPLTFNQNRTGEAVQPLDMMAVSPTLSAVGSAIEGK 405

Query: 423 DTEESFADSLRQRAGFVKKIKDDYNLTTSH--FNKTEENQLRTQLVKRPASESVDLIRGA 480
           D  + FA+ +  R+  +  +  +      H      E   L + L  +P  E   ++   
Sbjct: 406 DISDRFAEQIANRSATLDALSQNTGFKVPHKILLPQEVAVLTSTLKDKPTGEQAAILAQL 465

Query: 481 YNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTE---- 536
             ++ D      ++    I     +    L+   SD  + +   +L G +  K  +    
Sbjct: 466 RKSIPDDRD--YKAVMQQIYPE--APTAALAGSLSD--QKSTNKVLQGYEQLKANKGDMT 519

Query: 537 --TRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYT 594
                  D  +       +++      +                   Y +G+    G Y+
Sbjct: 520 NWNAAKKDFVTEFDSITGNAFAGRHEARQGAINIAF----------AYHVGNASQKGEYS 569

Query: 595 LN--RVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDFEDR---LWYATKDTGEYDPYT 649
            +    +V DA++  +G +  ++  + +  P G+S +DF+ R   L Y   +    D   
Sbjct: 570 TDISGSQVKDAIKNTVGES-TSLGGAQVFVPVGVSVSDFKYRYPALLYKALERQGMDVSR 628

Query: 650 IKYMNV-------GSGKYMIIKNGNPKVDKEGKTIIINV 681
               ++         G Y + +  +  VD +G+ ++IN+
Sbjct: 629 ANQASLFNLLPAGPDGDYFVAQGRDALVDAKGRPLMINL 667


>gi|254251751|ref|ZP_04945069.1| hypothetical protein BDAG_00948 [Burkholderia dolosa AUO158]
 gi|124894360|gb|EAY68240.1| hypothetical protein BDAG_00948 [Burkholderia dolosa AUO158]
          Length = 698

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 70/468 (14%), Positives = 133/468 (28%), Gaps = 77/468 (16%)

Query: 267 RLDDTKRRRLLEHLSSRDNALNTKLRKETQAQARRIDAQLNHG--ITVKPSELIPLEDYT 324
           +LD  KR ++L  + S   +L  ++  E QA+ R      N    +  +     P E   
Sbjct: 248 KLDAGKRNQVLASVVSNRLSLQNQMTSEQQAREREAVTAFNQATDLMTQGKRFSP-EYVQ 306

Query: 325 QAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMM 384
           Q     +GT L    Q     A   A    +S  + +  +Q  + +  +           
Sbjct: 307 QLTAATRGTALEQQTQGVIKQAAVGASFSTLSVPEMRAAVQANESK-QNQSGTDPLEAAA 365

Query: 385 ATKYKEILEKSHRQSMQELNQDAISWGIKYKQID---PLRFDTEESFADSLRQRAGFVKK 441
             + K+IL  +     +    D  +  ++   ID   P+        A SL  RA     
Sbjct: 366 IKQQKQILTATDEAYKR----DPWNAALERGAIDVVPPIDTSGITQLASSLAARAQLAPV 421

Query: 442 IKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDK------------ 489
           ++       S     E   +   +   P +     +     ++ ++ +            
Sbjct: 422 VEHKAARRVSLLTPDEARNVLQTIDALPTNTKAQALALLGRSMGNAARINDLAEQWKDKS 481

Query: 490 -EGVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKD----TETRYNTDHK 544
                +  A   D     ++  S          A  IL G     +     +    T  +
Sbjct: 482 PAAALAMKAGAADPSGGPLMMQSG------MPVAQYILDGQDALANKLVKVDAAAATGLQ 535

Query: 545 SNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAM 604
           +     + D+    P                +E      + S + +G    N   V   +
Sbjct: 536 ATIAKRIGDAL--PPQ----------QLGDARETAYFAAVASARKNGRDVPNSTDVETGI 583

Query: 605 QIVLGNTPVNIN------ESMLMPPRGMSKTDFEDRLWYA-----TKDTGEYDPYTI--- 650
            +  G               M   P G S  DF+  +  A         G     ++   
Sbjct: 584 NVATGGLAKTGGIDPRGDRYMAAKPWGWSDDDFDGGVKQASITNIENQPGGRPVDSVIAN 643

Query: 651 ----------------KYMNVG-SGKYMIIKNGNPKVDKEGKTIIINV 681
                           +   VG  G Y ++    P  D  G  ++I++
Sbjct: 644 GTKIPIDQFMQQFASYRLQRVGIGGTYTVLTGARPVTDTTGAPLLIHL 691


>gi|221201508|ref|ZP_03574547.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
 gi|221207936|ref|ZP_03580942.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
 gi|221172121|gb|EEE04562.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
 gi|221178776|gb|EEE11184.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
          Length = 706

 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 94/332 (28%), Gaps = 53/332 (15%)

Query: 391 ILEKSHRQSMQELNQDAISWGIKYKQ---IDPLRFDTEESFADSLRQRAGFVKKIKDDYN 447
            LE+ H  S+     D  +  +       +  +   +      SL  RA     ++    
Sbjct: 359 QLEQIHTASVAAYKADPWNAALDRGVLQGVPQVDTSSVPGLVTSLASRAQAAGAVEQAAG 418

Query: 448 LTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEG-------------VRS 494
              S     E   + T +   P       +        ++ +                 +
Sbjct: 419 RRVSLLTPDEAQTVLTAVDALPIDTKAQALNQIGQAFGNAGRIADLAAQWKEKSPAMALA 478

Query: 495 SFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYN----TDHKSNKFDS 550
             A   D G   ++  S          +  IL+G +  KD   + +    T  ++   ++
Sbjct: 479 LKAGAADAGGRPLMTTSGA------PLSTFILAGAQALKDKTVKIDDVAGTGMRAAIANA 532

Query: 551 LYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGN 610
           + DS    P    +   A         A      G  + S     N +  +       G 
Sbjct: 533 IGDSL--PPEQAEDAKEAAYFIA----AGSAARGGRTQPSSTDVQNAISGATGGISTTGG 586

Query: 611 TPVNINESMLMPPRGMSKTDFEDRLWYAT-KDTGEYDPYTI------------------- 650
             +N   +++  P G  + DF+  +   T  +       T+                   
Sbjct: 587 LQINGKPNIVAMPYGWREEDFQSAVKSVTAANIENPGVDTVVANGHEIPVADFVKQFASY 646

Query: 651 KYMNVG-SGKYMIIKNGNPKVDKEGKTIIINV 681
           + + VG  G Y +        DK G  I +++
Sbjct: 647 RLVRVGVRGTYAVSTGSKFVTDKTGAPITVHL 678


>gi|221213944|ref|ZP_03586917.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
 gi|221166121|gb|EED98594.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
          Length = 706

 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/334 (13%), Positives = 95/334 (28%), Gaps = 57/334 (17%)

Query: 391 ILEKSHRQSMQELNQDAISWGIKYKQ---IDPLRFDTEESFADSLRQRAGFVKKIKDDYN 447
            LE+ H  S+     D  +  +       +  +   +      SL  RA     ++    
Sbjct: 359 QLEQIHTASVAAYKADPWNAALDRGVLQGVPQVDTTSVPGLVTSLASRAQAAGAVEQAAG 418

Query: 448 LTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEG-------------VRS 494
              S     E   +   +   P       +        ++ +                 +
Sbjct: 419 RRVSLLTPDEAQTVLNAVDALPIDTKAQALNQIGQAFGNAGRIADLAAQWKEKSPAMALA 478

Query: 495 SFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYNTDHKSNKFDSLYDS 554
             A   D G   ++  S          +  IL+G +  KD   + +    +    ++ ++
Sbjct: 479 LKAGAADAGGRPLMTTSGA------PLSTFILAGAQALKDKTVKIDDVAGTGMRATIANA 532

Query: 555 YINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPV- 613
             ++  T+  +          KEA      GS    G    +   V +A+    G     
Sbjct: 533 IGDSLPTEQAED--------AKEAAYFIAAGSAARGGRTQPSSTDVQNAISGATGGISTT 584

Query: 614 -----NINESMLMPPRGMSKTDFEDRLWYAT-KDTGEYDPYTI----------------- 650
                N   +++  P G  + DF+  +   T  +       T+                 
Sbjct: 585 GGLQINGKPNIVAMPYGWREEDFQSAVKSVTAANIENPGVDTVVANGHEIPVADFVKQFA 644

Query: 651 --KYMNVG-SGKYMIIKNGNPKVDKEGKTIIINV 681
             + + VG  G Y +        DK G  I +++
Sbjct: 645 SYRLVRVGVRGTYAVKTGSKFVTDKSGTPITVHL 678


>gi|262371856|ref|ZP_06065135.1| predicted protein [Acinetobacter junii SH205]
 gi|262311881|gb|EEY92966.1| predicted protein [Acinetobacter junii SH205]
          Length = 663

 Score = 73.3 bits (178), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 69/406 (16%), Positives = 148/406 (36%), Gaps = 45/406 (11%)

Query: 317 LIPLEDYTQAYGVE-QGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNP 375
           LIP ED  ++     +GTE  +     S A  +V +   +   + + +L K   E  +  
Sbjct: 276 LIPSEDVIKSRLARVKGTEKESEFVQYSGALVEVQQFMRLGPDEREAYLSKRRVEAQNTA 335

Query: 376 SLSLASTMMATKYKEILEKSHRQS-MQELNQDAISWGIKYKQ------IDPLRFDTEESF 428
             +       +    +L K+H      E N   +++ IK  Q       + +     E+ 
Sbjct: 336 QDN---PKDVSWKLNLLSKTHENMLNYEKNNSTLAYSIKTGQDLTVVPTNAILSGNPEAI 392

Query: 429 ADSLRQRAGFVKKIKDDYNLTTSH-----FNKTEENQLRTQLVKRPASESVDLIRGAYNT 483
           A      +  +K I  +  L  +      F+  ++++L+    K    + + L+   Y +
Sbjct: 393 AA----LSKNIKSIHANNVLNGTVGSLNPFSTQQQSELKQFWEKAKPGDKLSLLTSLYKS 448

Query: 484 LSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDA-KNAAMVILSGMKHQKDTETRYNTD 542
            S  +    R     I  +      RLS+  ++   ++ A  I++G    +D   +    
Sbjct: 449 -SAGNANASRDMINGIAGDSG--AYRLSASLNNRGLQDIAGQIVTG----QDLIEKGLVK 501

Query: 543 HKSNKFDSLYDSY-INTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSG----NYTLNR 597
              +    L ++Y                +  K   A  +     + DS     N T++ 
Sbjct: 502 VDESGLTKLTEAYLAGITSPGKPDFQIYLDSIKANYAYLVQKSEKVTDSKGNILNKTIDE 561

Query: 598 VRVSDAMQIVLGNTPV----NINESMLMPPRGMSKTDFEDRLW-YATKDTGEYD-PYTIK 651
              + A + V G          ++S+++ P  + +  F ++L  + +++   Y       
Sbjct: 562 ELFNKAAKNVTGGKFTSGGFFGSKSVVLRPHTVGEKSFREQLESFNSRNARNYGGSDKDF 621

Query: 652 YMNVGSGKYMIIKNGNPKVD--KEGKTIIINVEDVNRDERMESTIR 695
           ++++   +       NP V   K G   I++  D  R +R+  T+R
Sbjct: 622 FLDLPLEQ----DPKNPYVYYFKNGTKYIMDATDKKRQKRLAFTVR 663


>gi|48697205|ref|YP_024935.1| hypothetical protein BcepC6B_gp15 [Burkholderia phage BcepC6B]
 gi|47779011|gb|AAT38374.1| gp15 [Burkholderia phage BcepC6B]
          Length = 706

 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 45/394 (11%), Positives = 113/394 (28%), Gaps = 57/394 (14%)

Query: 333 TELYNLQQFKSVAAPD---VARIKLMSTFDAKKFLQKIDDEYISNP-SLSLASTMMATKY 388
            +L    +  +VA      +      + F +    Q+          + +  +       
Sbjct: 295 NQLLTNTEGTTVAGAVRELIGTASQHAGFASASLPQQAATLQQYQTEAATRGTDPDQAAS 354

Query: 389 KEILEKSHRQSMQELNQDAISWGIKYKQ---IDPLRFDTEESFADSLRQRAGFVKKIKDD 445
            + LE+ H  S+     D  +  +       +  +   +      SL  RA     ++  
Sbjct: 355 VKQLEQIHTASVAAYKADPWNAALDRGVLQGVPKVDTSSVPGLVSSLAARAQTAGAVEQA 414

Query: 446 YNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNGLS 505
                S     E  +  T +   P       +        ++ +    ++    +   ++
Sbjct: 415 AGRRVSLLTPDEAEKTLTAVDSLPIDTKAQALNQIGQAFGNAGRIADLAAQWKEKSPAMA 474

Query: 506 AVVRL-SSEFSDDA------KNAAMVILSGMKHQKDTETRYN----TDHKSNKFDSLYDS 554
             ++  +++              +  IL+G +  KD   + +    T  ++   +++ D+
Sbjct: 475 LALKAGAADVGGKPLLTTSGAPLSTFILTGAQALKDKTVKIDEVAGTGMRATIANAIGDA 534

Query: 555 YINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVN 614
               P    +   A                GS    G    +   V +A+    G     
Sbjct: 535 L--PPEQADDAKEAAYFIA----------AGSAARGGRTQPSSTDVQNAISGATGGISTT 582

Query: 615 INE------SMLMPPRGMSKTDFEDRLWYAT-KDTGEYDPYTI----------------- 650
             +      +++  P G  + DF+  +   T  +       ++                 
Sbjct: 583 GGQQINGKPNIVAMPYGWREDDFQSAVKQVTAANIENPGVDSVLANGHEIPVADFVKQFA 642

Query: 651 --KYMNVG-SGKYMIIKNGNPKVDKEGKTIIINV 681
             + + VG  G Y +        DK G  + +++
Sbjct: 643 SYRLVRVGIRGTYAVSTGSKFVTDKTGAPVTVHL 676


>gi|294648409|ref|ZP_06725908.1| hypothetical protein HMP0015_0117 [Acinetobacter haemolyticus ATCC
           19194]
 gi|292825714|gb|EFF84418.1| hypothetical protein HMP0015_0117 [Acinetobacter haemolyticus ATCC
           19194]
          Length = 675

 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 57/394 (14%), Positives = 123/394 (31%), Gaps = 43/394 (10%)

Query: 289 TKLRKETQAQARRID---AQLNHGITVKPSELIPLEDYTQAYGVEQ--GTELYNLQQFKS 343
           ++++K  + +++ +D   AQL            PL +      +E   GT+     +   
Sbjct: 247 SRIQKGQEIRSKELDKEHAQLTKDFVADAFTGYPLSESLVNQTLEAVKGTKYEAEVREAI 306

Query: 344 VAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQEL 403
               D  + +  S  + ++ + ++  E  +             K  ++ +     S Q  
Sbjct: 307 GLNKDAQKFRDASPIEQERSIARLTAELENV---GQEDATGLKKKLDVFKSIAATSKQRA 363

Query: 404 NQDAIS----------WGIKYKQID--PLRFDTEESFADSLRQRAGFVKKIKDDYNLTTS 451
           N D ++          + +  +QI    + F   +   + L ++      +      +  
Sbjct: 364 NDDPVAQVQSQTGHKLYTVTPEQIGTGQIDFKKAQITTELLAEQKKANGDVG-----SLI 418

Query: 452 HFNKTEENQLR-TQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDN-----GLS 505
            +NK+E    +       P  +   L         + + +    S    E N     G++
Sbjct: 419 QWNKSERTAFKDRYFEASPKQQKAMLTDLTKMAGKNKEAQKEYFSLIGGEKNAYDYMGIA 478

Query: 506 AVVRLSSEFSDDAKNAAMVILSGM---KHQKDTETRYNTDHKSNKFDSLYDSYINTPLTK 562
            + +L     +    AA V L G       + +      +  +       ++        
Sbjct: 479 KLNQLDVTLHNTNIRAAEVALEGKQILNAGQASVLGAEKEFHNAIQAEFGNAAAIGTNEH 538

Query: 563 LEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPV---NINESM 619
                   +      A +   +    D GN  +N+     A  I  G T       N + 
Sbjct: 539 RAYQNLAYSIYLGL-AKRGENIVKRDDKGNPIINKEMAKQAFDIATGGTYKQKLGKNTNH 597

Query: 620 LMPPRGMSKTDFEDRLWYA-----TKDTGEYDPY 648
           +  P G ++T FED +         K+TG   P 
Sbjct: 598 IFMPYGFTQTSFEDHIQNHFRTQYRKETGFLPPD 631


>gi|212710807|ref|ZP_03318935.1| hypothetical protein PROVALCAL_01875 [Providencia alcalifaciens DSM
           30120]
 gi|212686504|gb|EEB46032.1| hypothetical protein PROVALCAL_01875 [Providencia alcalifaciens DSM
           30120]
          Length = 913

 Score = 57.5 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 63/415 (15%), Positives = 141/415 (33%), Gaps = 35/415 (8%)

Query: 261 GLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQARRIDAQLNHGITV--KPSELI 318
           G   +D LD++ + + L+     D     +L+ E         A   +G+     PSE  
Sbjct: 400 GSVAFDALDESDQAKYLKQAEQMDKQRQQQLQIELGTTISDSYAAWENGLDAPNAPSE-- 457

Query: 319 PLEDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLS 378
             +    A+G ++GT +    +     A  ++  K M+    +  L  I  +   +   +
Sbjct: 458 --KTIISAFGYDKGTAMIADMREAKRYAGLISAAKDMTPQAQRSLLNSIMPDPSES---N 512

Query: 379 LASTMMATKYK-EILEKSHRQSMQELNQDAISWGIKYK-QIDPLRFDTEESFADSLRQRA 436
            AS M   +   + ++ + +   +  + + +   I+    +DP     +++         
Sbjct: 513 YASKMQRWEKFGKFVDSNIKAQNKAFSANRLQLSIQNNFPLDPNDKSNQDAADHYFANNI 572

Query: 437 GFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSF 496
                I+D+ +L       +    + +Q+  + A+ S          +S          +
Sbjct: 573 ESSFNIRDENSLNAVAEISSRTGIIPSQIKSKLATGSTSRNPELVIPMSK--------MY 624

Query: 497 AHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRY------NTDHKSNKFDS 550
             I DN  SA+  LS++          +  SGM  +K  +  Y      N   K+   + 
Sbjct: 625 GQIFDNNPSAINGLSTDAMAYYGKIYDLTRSGMDSEKAIDIAYNLTYEQNDRTKAIIAEQ 684

Query: 551 LYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGN 610
           + D   +    K  Q      F     +    +     ++  Y  +   + DA     G 
Sbjct: 685 MRDKKYSKERDKAAQGNINSFFALGGFS-SPNVTKPGINNREYMRDYQTLYDANFASTGG 743

Query: 611 TPVN---INESMLMPPRGMSKTDFEDRLWYATKDTGEYDPYTIKYMNVGSGKYMI 662
            P     + ++ +    G++  + +D +     +              G+G ++I
Sbjct: 744 DPDLAKKMTDAQVKKTWGVTSINGKDEVMRYAPEA------VYGTNESGAGNWII 792


>gi|227355849|ref|ZP_03840242.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
 gi|227164168|gb|EEI49065.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
          Length = 1027

 Score = 49.0 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 99/288 (34%), Gaps = 25/288 (8%)

Query: 261 GLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQARRIDAQLNHGITV--KPSELI 318
           G A +D LD+  + + L            +L+++   +     A    G+     P+   
Sbjct: 496 GSAAFDALDEADQAKYLRQAEQLRKQKQGELQQQLGTRVADSYAAWERGLEAPNAPTH-- 553

Query: 319 PLEDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLS 378
             ++   A+G ++G+ +    Q     A  ++  K MS    +  L +I  +       +
Sbjct: 554 --DELISAFGYDKGSAMSADMQEAKRYAGFMSAAKEMSPQAQQALLSQIRPQTGEV---N 608

Query: 379 LASTMMATKYK-EILEKSHRQSMQELNQDAISWGIKYK-QIDPLRFDTEESFADSLRQRA 436
             S +   +   + +E + ++  ++   + +   I+    +DP   + +++  D   +  
Sbjct: 609 YESKIQRWEKFGKFVEGNIKEQDKQFAANRLQLSIQNNFPLDPNDKNNQQAADDYFEKHI 668

Query: 437 GFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGV---R 493
                ++DD +L            + +Q+                   +  D E V    
Sbjct: 669 QQSFNLRDDNSLNAVAELTARTGIIPSQVK-----------SVLNMGATSKDPEVVLPIA 717

Query: 494 SSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYNT 541
             +  I DN  ++   + S           +  +GM   K  ET + T
Sbjct: 718 KMYGQIFDNNPASATDIPSSTMAYYSKVYSLSRAGMPDDKAVETAFKT 765


>gi|301046397|ref|ZP_07193557.1| conserved domain protein [Escherichia coli MS 185-1]
 gi|300301623|gb|EFJ58008.1| conserved domain protein [Escherichia coli MS 185-1]
          Length = 915

 Score = 49.0 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/383 (13%), Positives = 117/383 (30%), Gaps = 32/383 (8%)

Query: 261 GLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQARRIDAQLNHGITVKPSELIPL 320
           G A +D +    + + L   +   N    +   +     +   + L+ G+  KP +L   
Sbjct: 390 GNAAFDAMSPQMQIQALRQANELRNQYRQQYADQLSTVVKDAYSALDEGL--KPEKLPSE 447

Query: 321 EDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLA 380
           +D+ +A G   G   +   Q +      +   K ++    +  L+++  +  + P  +  
Sbjct: 448 DDFIRANGPRIGAMKWKDMQAQIQYGGVIGAAKDLTPEGRQDILERLRPQDPNAPGFAAN 507

Query: 381 STMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVK 440
                    +  E      +Q+     +S       +DP   + + +      Q      
Sbjct: 508 QQRWEKMQAKFKEMDREWEIQQGRNRFVSSMQNNFPLDPNDKNNQAAVDRYFAQDIAPSF 567

Query: 441 KIKDDYNLTTSHFNKTEENQLRTQLVK--------RPASESVDLIRGAYNTLSDSDKEG- 491
            I D  ++ T     T+   + TQ+          R  +  V + +       ++     
Sbjct: 568 SISDPQSINTLVTVTTKSGMIPTQVKTMLNSGATSRDPALVVPMAKFYGQLFDNNPAAAA 627

Query: 492 -------------VRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETR 538
                           S A + +   +  +  S  F     +    +LS     K     
Sbjct: 628 TLDKSTMAFYGKVYDYSRAGVPE-DKAVDMAYSQVF--QQDDRMKQMLSTAMRDKKYVAA 684

Query: 539 YNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRV 598
             T  ++N          +  +T   +S A     +D + I      +   +G       
Sbjct: 685 RATAAQNNASSLTSFGSWSPDITDPGKSNAAYQ--RDYQTI---YDANFVQTGGDAEQAE 739

Query: 599 RVSDAMQIVLGNTPVNINESMLM 621
           ++++AM            ++ +M
Sbjct: 740 KMTNAMIRTTWGVSTVNGKAEVM 762


>gi|294489804|gb|ADE88560.1| conserved hypothetical protein [Escherichia coli IHE3034]
          Length = 904

 Score = 49.0 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/383 (13%), Positives = 117/383 (30%), Gaps = 32/383 (8%)

Query: 261 GLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQARRIDAQLNHGITVKPSELIPL 320
           G A +D +    + + L   +   N    +   +     +   + L+ G+  KP +L   
Sbjct: 379 GNAAFDAMSPQMQIQALRQANELRNQYRQQYADQLSTVVKDAYSALDEGL--KPEKLPSE 436

Query: 321 EDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLA 380
           +D+ +A G   G   +   Q +      +   K ++    +  L+++  +  + P  +  
Sbjct: 437 DDFIRANGPRIGAMKWKDMQAQIQYGGVIGAAKDLTPEGRQDILERLRPQDPNAPGFAAN 496

Query: 381 STMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVK 440
                    +  E      +Q+     +S       +DP   + + +      Q      
Sbjct: 497 QQRWEKMQAKFKEMDREWEIQQGRNRFVSSMQNNFPLDPNDKNNQAAVDRYFAQDIAPSF 556

Query: 441 KIKDDYNLTTSHFNKTEENQLRTQLVK--------RPASESVDLIRGAYNTLSDSDKEG- 491
            I D  ++ T     T+   + TQ+          R  +  V + +       ++     
Sbjct: 557 SISDPQSINTLVTVTTKSGMIPTQVKTMLNSGATSRDPALVVPMAKFYGQLFDNNPAAAA 616

Query: 492 -------------VRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETR 538
                           S A + +   +  +  S  F     +    +LS     K     
Sbjct: 617 TLDKSTMAFYGKVYDYSRAGVPE-DKAVDMAYSQVF--QQDDRMKQMLSTAMRDKKYVAA 673

Query: 539 YNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRV 598
             T  ++N          +  +T   +S A     +D + I      +   +G       
Sbjct: 674 RATAAQNNASSLTSFGSWSPDITDPGKSNAAYQ--RDYQTI---YDANFVQTGGDAEQAE 728

Query: 599 RVSDAMQIVLGNTPVNINESMLM 621
           ++++AM            ++ +M
Sbjct: 729 KMTNAMIRTTWGVSTVNGKAEVM 751


>gi|282877204|ref|ZP_06286042.1| transglutaminase-like protein [Prevotella buccalis ATCC 35310]
 gi|281300696|gb|EFA93027.1| transglutaminase-like protein [Prevotella buccalis ATCC 35310]
          Length = 855

 Score = 45.6 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 45/299 (15%), Positives = 95/299 (31%), Gaps = 39/299 (13%)

Query: 435 RAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRS 494
           R      I+  Y      +   +E++L   LVK   +    +I+  Y+   + ++  + S
Sbjct: 398 RFAQEDSIRKAYESN--FYQAVDESELSQLLVKARGN--WRVIKNFYDKYPEKEERAL-S 452

Query: 495 SFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYNTDHKSNKFDSLYDS 554
               + D  L  +   S +  +D   A    LS     +     +    ++    +    
Sbjct: 453 LLKTLSDKDLRDI---SMDILEDHLLAKSNQLSPRVENEMIILPFKQQLQNAFDPATTKK 509

Query: 555 YINTPLTKLEQSTAGGNFNKDKEAIKLYLLG-------------------SMKDSGNYTL 595
           +   P   +E        N D EA+++                        +  S     
Sbjct: 510 FQQNPALLVEWIQKNIRINPDNEALRIAQTPIGVWKSRFTDARSRDIFFVDLARSIGIEA 569

Query: 596 NRVRVSDAMQIVLGNTPVNIN----------ESMLMPPRGMSKTDFEDRLWYATKDTGEY 645
            +  V+  +Q  L +  +++N          +  L+    +     +D  +Y      + 
Sbjct: 570 RKDVVTSKVQYRLNDQWMDVNFETEKQKTAPKGKLVLSY-LPSKYLDDPKYYNHFSISKI 628

Query: 646 DPYTIKYMNVGSGKYMIIKNGNPK-VDKEGKTIIINVEDVNRDERMESTIRHYEHQIFN 703
           +      +N   G+  +    + K   K+G ++      +    RM S      HQIFN
Sbjct: 629 ENGIPVLLNFDEGQVDMGGGTSWKNTFKDGTSLDAGTYFLVTGTRMASGNVKESHQIFN 687


>gi|255007652|ref|ZP_05279778.1| hypothetical protein Bfra3_00854 [Bacteroides fragilis 3_1_12]
 gi|313145346|ref|ZP_07807539.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313134113|gb|EFR51473.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 1045

 Score = 45.6 bits (106), Expect = 0.034,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 94/334 (28%), Gaps = 29/334 (8%)

Query: 307 NHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQK 366
           N GI+    +L  L+ YT A    +   ++N  +  + A P     K+        +   
Sbjct: 258 NFGISKVVKKLDMLDGYTYALYRNEAARMFNEYENANEAIPYPGTSKVDPNTGESVY--- 314

Query: 367 IDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEE 426
                    + +  S     +  E             + D   + I    +D        
Sbjct: 315 -SPGPEDYRNGTYPSVNWQDEVFETAFSQEYNLSVNGSNDKGYYAISGNILDQ-----SG 368

Query: 427 SFADSLRQRAGFVKKIKD------DYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGA 480
              +S  +R  F   +        +     S  N      L         S+ +      
Sbjct: 369 IIHNSGYKRYSFRANLARKVHDWIEIGTNMSFTNS-----LNKLAKTNSVSDGIIRGALF 423

Query: 481 YNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYN 540
           Y   +  D E   +       N          E + ++  ++  +   +   KD + R N
Sbjct: 424 YPATAPLDDETNNAQLNWFSSNPYVYTRAAKDELTTNSFFSSSFV--EITPYKDLKVRQN 481

Query: 541 TDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLN-RVR 599
                N  +   D Y N    + +  T G     D  A  L L      +  +  N  + 
Sbjct: 482 VGFSYNINER--DVYYNRETVEGKDPTNGYASKADNWAKNLVLETMATYNKTFNKNHSLN 539

Query: 600 VSDAMQIVLGNTPVNINESMLMPPRGMSKT-DFE 632
           V  A     G      N++M+        T DF+
Sbjct: 540 VVAAFSYERG---DYGNKAMVATGFPQDLTEDFD 570


>gi|332800735|emb|CBY88575.1| hypothetical protein [Pantoea phage LIMEzero]
          Length = 893

 Score = 45.2 bits (105), Expect = 0.038,   Method: Composition-based stats.
 Identities = 64/403 (15%), Positives = 123/403 (30%), Gaps = 51/403 (12%)

Query: 325 QAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMM 384
           Q  G    ++   L Q  +  +  + +   M   +    +Q+ + +  +N    ++    
Sbjct: 95  QTAGYSDQSKRMELAQQAAKISAKMPQYAAMDPEEFLGVVQQANQDLFANT-DGMSMRGR 153

Query: 385 ATKYKEILE--------KSHRQSMQELNQDAISWGIKYKQIDPLRFD-----TEESFADS 431
                  L         ++       +NQ +  +  +   +  +          +++A  
Sbjct: 154 RDLLDNQLTNTNTLIRTQAATHGAYLVNQRSQMYNAQGNTLASMVAQAKSTGDGDAYAAG 213

Query: 432 LRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLV--KRPASESVDLIRGAYNTLSDSDK 489
           + Q   +VK I  D  L      K   + +   L    R A ESV +  G  NTL     
Sbjct: 214 IGQTMQWVKSIMTDPQLPMDAKQKQVTSMMGLMLQQDSRTAVESV-VNSGLLNTLPPDQL 272

Query: 490 EGVRSSFA------HIEDN--------------GLSAVVRLSSEFSDDAKNAAMVILSGM 529
             ++S+         ++DN                   V +S   S   + A   +++G 
Sbjct: 273 ASIQSAIRESKNRTQLQDNQGLYDQFSQMRARQDTYGDVPVSDFNSLLTRMADARLVTGD 332

Query: 530 KHQKDTETRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKE---------AIK 580
            +    E       K+ K   L +S+     T + +  A      D           A  
Sbjct: 333 GYMAAQEQYLKNYAKNAKAAQLGNSFAQGDQTGMLRLNATPQDAADAYIKTAMKQPGATS 392

Query: 581 LYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDFEDRLWYATK 640
             + GS+   G  T   V    A  ++            + P    S T   DR+  A +
Sbjct: 393 ASVAGSLLSIGMATGQPVAYQRAAGLIEPGLTNFGTVGQMNPDAAQSVTGMLDRITVAEQ 452

Query: 641 --DTGEYDPYTIKYMNVGSGKYMIIK---NGNPKVDKEGKTII 678
             DT  +             K + ++        VD+ G+  I
Sbjct: 453 HGDTTAFSKLLSGLTPENQEKLVFMREQIKSGKTVDQAGQDYI 495


>gi|153952470|ref|YP_001398457.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152939916|gb|ABS44657.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 859

 Score = 44.8 bits (104), Expect = 0.046,   Method: Composition-based stats.
 Identities = 62/359 (17%), Positives = 104/359 (28%), Gaps = 68/359 (18%)

Query: 267 RLDDTKRRRLLEHLSSRDNALNTKLRKETQ------AQARRID----------------- 303
           RLD+  +   L +L  + NALN++   E         + + ID                 
Sbjct: 440 RLDEIAKE--LANLKEKQNALNSQFENEKSVFDGISTKKKEIDLLKNEASLAKTRGEFQK 497

Query: 304 -AQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAA---PDVA-RIKLMSTF 358
            A+L +G      + + + +       E G  L N      VA          ++ M T 
Sbjct: 498 AAELEYGKIPNLEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTS 557

Query: 359 DAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQD-----------A 407
           + +KFL+       S             K    L ++ +++   LN D            
Sbjct: 558 EKQKFLEVEKHLKESVIGQD--------KALSALARAIKRNKAGLNTDNKPIGSFLFLGP 609

Query: 408 ISWGIKY--KQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQL 465
              G     K +    FD E++              +         +    E  +L   +
Sbjct: 610 TGVGKTQSAKALAKFLFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGELTEAV 669

Query: 466 VKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNG-----LSAVVRLSSEFSDDAKN 520
            ++P S  V L         D     V +    I D+G         V   +       N
Sbjct: 670 RRKPYS--VLLFDEVEKAHKD-----VFNVLLGILDDGRATDSKGVTVDFKNTIIILTSN 722

Query: 521 AAMVILSGMKHQKDTETRYNTDHK----SNKFDSLYDSYINTPLTKLEQSTAGGNFNKD 575
            A  ++  +   K+ E     + K        + L D     PL K E         KD
Sbjct: 723 IASNVIMNLN-GKEQEDAVKNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKD 780


>gi|157372112|ref|YP_001480101.1| lytic transglycosylase catalytic [Serratia proteamaculans 568]
 gi|157323876|gb|ABV42973.1| Lytic transglycosylase catalytic [Serratia proteamaculans 568]
          Length = 898

 Score = 44.4 bits (103), Expect = 0.059,   Method: Composition-based stats.
 Identities = 41/330 (12%), Positives = 87/330 (26%), Gaps = 24/330 (7%)

Query: 333 TELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEIL 392
            + Y   Q           I           +  +  + +S+P  +        +    +
Sbjct: 460 QQSYQRYQQTLAMQAAYQTIVQGDVQQGMAAVNAMKPD-VSDPDFTFKQ-----QRYAQV 513

Query: 393 EKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNL-TTS 451
              + Q  +    D  +W ++   +    ++       S    A  ++  K+   + +  
Sbjct: 514 ASKYSQVQKAREDDPGTWLLQNSPVIKDAYNQFSQRQVSGEYFASRIRAEKERLGIRSKD 573

Query: 452 HFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVRLS 511
                  N +  Q+      +SV  ++    +   S    V +       + LS V    
Sbjct: 574 ILPAEMVNSVLHQIDSSN-EQSVAAVQAIAQSYG-SQAPAVIAQLQGKSGSALSVV---- 627

Query: 512 SEFSDDAKNAAMVILSGMKHQKDTETRYNTDHKSNKFDSLYDSYI--NTPLTKLEQSTAG 569
              S D  NAA  +    K   D   + +    S+      D +      L         
Sbjct: 628 --MSVDNANAANALFQNRKLSTDELKKASGTQSSSVESEWSDQFADFGVSLASQRGGLKA 685

Query: 570 GNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINESMLMPPRGMSKT 629
            +   ++     Y+  S    G           A   + G+         L     ++  
Sbjct: 686 YSDFNEQGKRLAYIYASRGMDGASAA-----KMAFNQIAGDQYDFEGAWRLPKSLNLNVR 740

Query: 630 DFEDRLWYATKDTGEYDPYTIKYMNVGSGK 659
           D  D      +     D     +  VG  +
Sbjct: 741 DITDGTKNYLEKLKPEDIDPQGF--VGDSR 768


>gi|86149199|ref|ZP_01067431.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|85840557|gb|EAQ57814.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
           jejuni CF93-6]
          Length = 857

 Score = 44.4 bits (103), Expect = 0.061,   Method: Composition-based stats.
 Identities = 63/359 (17%), Positives = 105/359 (29%), Gaps = 68/359 (18%)

Query: 267 RLDDTKRRRLLEHLSSRDNALNTKLRKETQ------AQARRID----------------- 303
           RLD+  +   L +L  + NALN++ + E        A+ + ID                 
Sbjct: 440 RLDEIAKE--LANLKEKQNALNSQFQNEKSVFDGISAKKKEIDLLKNEASLAKARGEFQK 497

Query: 304 -AQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAA---PDVA-RIKLMSTF 358
            A+L +G      + + + +       E G  L N      VA          ++ M T 
Sbjct: 498 AAELEYGKIPSLEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTS 557

Query: 359 DAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQD-----------A 407
           + +KFL+       S             K    L ++ +++   LN D            
Sbjct: 558 EKQKFLEVEKHLKESVIGQD--------KALSALARAIKRNKAGLNADNKPIGSFLFLGP 609

Query: 408 ISWGIKY--KQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQL 465
              G     K +    FD E++              +         +    E  +L   +
Sbjct: 610 TGVGKTQSAKALAKFLFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGELTEAV 669

Query: 466 VKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNG-----LSAVVRLSSEFSDDAKN 520
            ++P S  V L         D     V +    I D+G         V   +       N
Sbjct: 670 RRKPYS--VLLFDEVEKAHKD-----VFNVLLGILDDGRATDSKGVTVDFKNTIIILTSN 722

Query: 521 AAMVILSGMKHQKDTETRYNTDHK----SNKFDSLYDSYINTPLTKLEQSTAGGNFNKD 575
            A   +  +   K+ E     + K        + L D     PL K E         KD
Sbjct: 723 IASNAIMNL-SGKEQEDAVKNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKD 780


>gi|121613623|ref|YP_001000212.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167005168|ref|ZP_02270926.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|87250327|gb|EAQ73285.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
           jejuni 81-176]
          Length = 857

 Score = 44.4 bits (103), Expect = 0.061,   Method: Composition-based stats.
 Identities = 63/359 (17%), Positives = 104/359 (28%), Gaps = 68/359 (18%)

Query: 267 RLDDTKRRRLLEHLSSRDNALNTKLRKETQ------AQARRID----------------- 303
           RLD+  +   L +L  + NALN++   E        A+ + ID                 
Sbjct: 440 RLDEIAKE--LANLKEKQNALNSQFENEKSVFDGISAKKKEIDLLKNEASLAKARGEFQK 497

Query: 304 -AQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAA---PDVA-RIKLMSTF 358
            A+L +G      + + + +       E G  L N      VA          ++ M T 
Sbjct: 498 AAELEYGKIPSLEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTS 557

Query: 359 DAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQD-----------A 407
           + +KFL+       S             K    L ++ +++   LN D            
Sbjct: 558 EKQKFLEVEKHLKESVIGQD--------KALSALARAIKRNKAGLNADNKPIGSFLFLGP 609

Query: 408 ISWGIKY--KQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQL 465
              G     K +    FD E++              +         +    E  +L   +
Sbjct: 610 TGVGKTQSAKALAKFLFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGELTEAV 669

Query: 466 VKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNG-----LSAVVRLSSEFSDDAKN 520
            ++P S  V L         D     V +    I D+G         V   +       N
Sbjct: 670 RRKPYS--VLLFDEVEKAHKD-----VFNVLLGILDDGRATDSKGVTVDFKNTIIILTSN 722

Query: 521 AAMVILSGMKHQKDTETRYNTDHK----SNKFDSLYDSYINTPLTKLEQSTAGGNFNKD 575
            A   +  +   K+ E     + K        + L D     PL K E         KD
Sbjct: 723 IASSAIMNL-SGKEQEDAVKNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKD 780


>gi|205355368|ref|ZP_03222139.1| ATP-dependent CLp protease ATP-binding subunit [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|205346602|gb|EDZ33234.1| ATP-dependent CLp protease ATP-binding subunit [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|315057930|gb|ADT72259.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 857

 Score = 44.4 bits (103), Expect = 0.063,   Method: Composition-based stats.
 Identities = 63/359 (17%), Positives = 104/359 (28%), Gaps = 68/359 (18%)

Query: 267 RLDDTKRRRLLEHLSSRDNALNTKLRKETQ------AQARRID----------------- 303
           RLD+  +   L +L  + NALN++   E        A+ + ID                 
Sbjct: 440 RLDEIAKE--LANLKEKQNALNSQFENEKSVFDGISAKKKEIDLLKNEASLAKARGEFQK 497

Query: 304 -AQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAA---PDVA-RIKLMSTF 358
            A+L +G      + + + +       E G  L N      VA          ++ M T 
Sbjct: 498 AAELEYGKIPSLEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTS 557

Query: 359 DAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQD-----------A 407
           + +KFL+       S             K    L ++ +++   LN D            
Sbjct: 558 EKQKFLEVEKHLKESVIGQD--------KALSALARAIKRNKAGLNADNKPIGSFLFLGP 609

Query: 408 ISWGIKY--KQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQL 465
              G     K +    FD E++              +         +    E  +L   +
Sbjct: 610 TGVGKTQSAKALAKFLFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGELTEAV 669

Query: 466 VKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNG-----LSAVVRLSSEFSDDAKN 520
            ++P S  V L         D     V +    I D+G         V   +       N
Sbjct: 670 RRKPYS--VLLFDEVEKAHKD-----VFNVLLGILDDGRATDSKGVTVDFKNTIIILTSN 722

Query: 521 AAMVILSGMKHQKDTETRYNTDHK----SNKFDSLYDSYINTPLTKLEQSTAGGNFNKD 575
            A   +  +   K+ E     + K        + L D     PL K E         KD
Sbjct: 723 IASSAIMNL-SGKEQEDAVKNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKD 780


>gi|148925882|ref|ZP_01809569.1| ATP-dependent CLP protease ATP-binding subunit [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|145844868|gb|EDK21972.1| ATP-dependent CLP protease ATP-binding subunit [Campylobacter
           jejuni subsp. jejuni CG8486]
          Length = 857

 Score = 44.4 bits (103), Expect = 0.065,   Method: Composition-based stats.
 Identities = 63/359 (17%), Positives = 104/359 (28%), Gaps = 68/359 (18%)

Query: 267 RLDDTKRRRLLEHLSSRDNALNTKLRKETQ------AQARRID----------------- 303
           RLD+  +   L +L  + NALN++   E        A+ + ID                 
Sbjct: 440 RLDEIAKE--LANLKEKQNALNSQFENEKSVFDGISAKKKEIDLLKNEASLAKARGEFQK 497

Query: 304 -AQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAA---PDVA-RIKLMSTF 358
            A+L +G      + + + +       E G  L N      VA          ++ M T 
Sbjct: 498 AAELEYGKIPSLEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTS 557

Query: 359 DAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQD-----------A 407
           + +KFL+       S             K    L ++ +++   LN D            
Sbjct: 558 EKQKFLEVEKHLKESVIGQD--------KALSALARAIKRNKAGLNADNKPIGSFLFLGP 609

Query: 408 ISWGIKY--KQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQL 465
              G     K +    FD E++              +         +    E  +L   +
Sbjct: 610 TGVGKTQSAKALAKFLFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGELTEAV 669

Query: 466 VKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNG-----LSAVVRLSSEFSDDAKN 520
            ++P S  V L         D     V +    I D+G         V   +       N
Sbjct: 670 RRKPYS--VLLFDEVEKAHKD-----VFNVLLGILDDGRATDSKGVTVDFKNTIIILTSN 722

Query: 521 AAMVILSGMKHQKDTETRYNTDHK----SNKFDSLYDSYINTPLTKLEQSTAGGNFNKD 575
            A   +  +   K+ E     + K        + L D     PL K E         KD
Sbjct: 723 IASSAIMNL-SGKEQEDAVKNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKD 780


>gi|86151601|ref|ZP_01069815.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|86153521|ref|ZP_01071725.1| chaperone clpB [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85841230|gb|EAQ58478.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|85843247|gb|EAQ60458.1| chaperone clpB [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 857

 Score = 44.4 bits (103), Expect = 0.066,   Method: Composition-based stats.
 Identities = 63/359 (17%), Positives = 104/359 (28%), Gaps = 68/359 (18%)

Query: 267 RLDDTKRRRLLEHLSSRDNALNTKLRKETQ------AQARRID----------------- 303
           RLD+  +   L +L  + NALN++   E        A+ + ID                 
Sbjct: 440 RLDEIAKE--LANLKEKQNALNSQFENEKSVFDGISAKKKEIDLLKNEASLAKARGEFQK 497

Query: 304 -AQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAA---PDVA-RIKLMSTF 358
            A+L +G      + + + +       E G  L N      VA          ++ M T 
Sbjct: 498 AAELEYGKIPSLEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTS 557

Query: 359 DAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQD-----------A 407
           + +KFL+       S             K    L ++ +++   LN D            
Sbjct: 558 EKQKFLEVEKHLKESVIGQD--------KALSALARAIKRNKAGLNADNKPIGSFLFLGP 609

Query: 408 ISWGIKY--KQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQL 465
              G     K +    FD E++              +         +    E  +L   +
Sbjct: 610 TGVGKTQSAKALAKFLFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGELTEAV 669

Query: 466 VKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNG-----LSAVVRLSSEFSDDAKN 520
            ++P S  V L         D     V +    I D+G         V   +       N
Sbjct: 670 RRKPYS--VLLFDEVEKAHKD-----VFNVLLGILDDGRATDSKGVTVDFKNTIIILTSN 722

Query: 521 AAMVILSGMKHQKDTETRYNTDHK----SNKFDSLYDSYINTPLTKLEQSTAGGNFNKD 575
            A   +  +   K+ E     + K        + L D     PL K E         KD
Sbjct: 723 IASSAIMNL-SGKEQEDAVKNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKD 780


>gi|284925775|gb|ADC28127.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
           jejuni IA3902]
          Length = 857

 Score = 44.4 bits (103), Expect = 0.068,   Method: Composition-based stats.
 Identities = 63/359 (17%), Positives = 104/359 (28%), Gaps = 68/359 (18%)

Query: 267 RLDDTKRRRLLEHLSSRDNALNTKLRKETQ------AQARRID----------------- 303
           RLD+  +   L +L  + NALN++   E        A+ + ID                 
Sbjct: 440 RLDEIAKE--LANLKEKQNALNSQFENEKSVFDGISAKKKEIDLLKNEASLAKARGEFQK 497

Query: 304 -AQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAA---PDVA-RIKLMSTF 358
            A+L +G      + + + +       E G  L N      VA          ++ M T 
Sbjct: 498 AAELEYGKIPSLEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTS 557

Query: 359 DAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQD-----------A 407
           + +KFL+       S             K    L ++ +++   LN D            
Sbjct: 558 EKQKFLEVEKHLKESVIGQD--------KALSALARAIKRNKAGLNADNKPIGSFLFLGP 609

Query: 408 ISWGIKY--KQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQL 465
              G     K +    FD E++              +         +    E  +L   +
Sbjct: 610 TGVGKTQSAKALAKFLFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGELTEAV 669

Query: 466 VKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNG-----LSAVVRLSSEFSDDAKN 520
            ++P S  V L         D     V +    I D+G         V   +       N
Sbjct: 670 RRKPYS--VLLFDEVEKAHKD-----VFNVLLGILDDGRATDSKGVTVDFKNTIIILTSN 722

Query: 521 AAMVILSGMKHQKDTETRYNTDHK----SNKFDSLYDSYINTPLTKLEQSTAGGNFNKD 575
            A   +  +   K+ E     + K        + L D     PL K E         KD
Sbjct: 723 IASSAIMNL-SGKEQEDAVKNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKD 780


>gi|73663123|ref|YP_301904.1| argininosuccinate synthase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|119361330|sp|Q49WA0|ASSY_STAS1 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|72495638|dbj|BAE18959.1| argininosuccinate synthase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 401

 Score = 44.4 bits (103), Expect = 0.073,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 85/271 (31%), Gaps = 43/271 (15%)

Query: 321 EDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLA 380
           E+++Q Y        Y ++              L     +KK ++          +    
Sbjct: 64  EEFSQDY------VSYAIKGNLMYEGTYPLVSALSRPLISKKLVEIASKTNSVGIAHGCT 117

Query: 381 STMMATKYKEILEKSHRQSMQELN---------QDAISWGIKYKQIDPLRFDTEESFADS 431
                    E+  K+    ++            ++ I + IK+    P++ D+  S   +
Sbjct: 118 GKGNDQVRFEVAIKALDPELKVFAPVREWAWSREEEIDYAIKHNIPVPIQHDSPYSIDQN 177

Query: 432 LRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDS-DKE 490
           L  R+     ++D Y          +   L  +L   P  E+ +++      +  S D  
Sbjct: 178 LWGRSNECGILEDPYATP-----PKDAYDLTNELEDAP-DEAEEIVLSFEKGIPVSLDGT 231

Query: 491 GVRSSFAHIEDNGL--------------SAVVRLSSEFSDDAKNAAMVILSGMKHQKDTE 536
             + S   +E N L                V   S E  +    AA VI++  K  +   
Sbjct: 232 AYKLSELILELNKLAGKHGVGRIDHVENRLVGIKSREVYETP--AAEVIMNAHKALETIT 289

Query: 537 TRYNTDH-----KSNKFDSLYDSYINTPLTK 562
              +  H     +    + +Y+    +PLT 
Sbjct: 290 LTKDVAHFKPVIEKQFSEQIYNGLWFSPLTD 320


>gi|88597118|ref|ZP_01100354.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|218562162|ref|YP_002343941.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|54035912|sp|Q9PI02|CLPB_CAMJE RecName: Full=Chaperone protein ClpB
 gi|88190807|gb|EAQ94780.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112359868|emb|CAL34656.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|315927008|gb|EFV06363.1| chaperone protein clpB [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315929555|gb|EFV08745.1| chaperone protein clpB [Campylobacter jejuni subsp. jejuni 305]
          Length = 857

 Score = 44.0 bits (102), Expect = 0.084,   Method: Composition-based stats.
 Identities = 63/359 (17%), Positives = 104/359 (28%), Gaps = 68/359 (18%)

Query: 267 RLDDTKRRRLLEHLSSRDNALNTKLRKETQ------AQARRID----------------- 303
           RLD+  +   L +L  + NALN++   E        A+ + ID                 
Sbjct: 440 RLDEIAKE--LANLKEKQNALNSQFENEKSVFDGISAKKKEIDLLKNEASLAKARGEFQK 497

Query: 304 -AQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAA---PDVA-RIKLMSTF 358
            A+L +G      + + + +       E G  L N      VA          ++ M T 
Sbjct: 498 AAELEYGKIPSLEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTS 557

Query: 359 DAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQD-----------A 407
           + +KFL+       S             K    L ++ +++   LN D            
Sbjct: 558 EKQKFLEVEKHLKESVIGQD--------KALSALARAIKRNKAGLNADNKPIGSFLFLGP 609

Query: 408 ISWGIKY--KQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQL 465
              G     K +    FD E++              +         +    E  +L   +
Sbjct: 610 TGVGKTQSAKALAKFLFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGELTEAV 669

Query: 466 VKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNG-----LSAVVRLSSEFSDDAKN 520
            ++P S  V L         D     V +    I D+G         V   +       N
Sbjct: 670 RRKPYS--VLLFDEVEKAHKD-----VFNVLLGILDDGRATDSKGVTVDFKNTIIILTSN 722

Query: 521 AAMVILSGMKHQKDTETRYNTDHK----SNKFDSLYDSYINTPLTKLEQSTAGGNFNKD 575
            A   +  +   K+ E     + K        + L D     PL K E         KD
Sbjct: 723 IASNAIMNL-SGKEQEDAVKNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKD 780


>gi|282881289|ref|ZP_06289973.1| hypothetical protein HMPREF9019_1865 [Prevotella timonensis CRIS
           5C-B1]
 gi|281304834|gb|EFA96910.1| hypothetical protein HMPREF9019_1865 [Prevotella timonensis CRIS
           5C-B1]
          Length = 457

 Score = 44.0 bits (102), Expect = 0.093,   Method: Composition-based stats.
 Identities = 48/383 (12%), Positives = 115/383 (30%), Gaps = 61/383 (15%)

Query: 334 ELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILE 393
           ++Y   +   +    ++ +  +ST+                    L   ++++     + 
Sbjct: 2   KIYKSMRNFRLLILVMSTVCALSTYSQ-----------DYKSKFGLYGNLLSSGRYLEMS 50

Query: 394 KSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQ---RAGFVKKIKDDYNLTT 450
           K +         +     +  K +  +  + +  +A SL     R  +     D   L  
Sbjct: 51  KVYTDKDSI---NPFL-KLNNKIVAAIA-NNQNRYAISLINDNLRYNWQAYGFDALYLAD 105

Query: 451 SHFN--------KTEENQLRTQLVKRPASESVDLIR----GAYNTLSDSDKEGVRSSFAH 498
            +F           EE  L         S+ +         A   L   ++  +++    
Sbjct: 106 VYFTLCKAEGLYDQEEALLEWLKQDYYPSQMIYYNDKKYTAATEKLISDEENSLKAKVLI 165

Query: 499 IEDNGLSAVVRLSSEFSDDAKNAAMVILSG--MKHQKDTETRYNTDHKSNKFDSLY---- 552
              + +      + +FS +      + L+G  +     TE RY         D L     
Sbjct: 166 SPVHAIRKDESQAVKFSVNPIIRTKIKLNGETLDAIWTTELRYPLQITPQVADQLGIVCG 225

Query: 553 -DSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDA------MQ 605
            DS    P+  L+    G        A+   ++        + L+R    +       + 
Sbjct: 226 KDSVAGCPVVYLDSINIGNLQFNHVPALVSVMVDPTAYIKEHKLSRKYAKELKAFYTRIN 285

Query: 606 IVLGNTPVNINESMLMPPRG----------MSKTDFEDRLWYATKDTGEY-------DPY 648
           +     P+      +               + K DFE+ +++A  D           + +
Sbjct: 286 VPQIGLPIIRLLEKIAIDWKHQIINFPTDTLPKADFEESMYFAYPDFPALYLPVSINNEF 345

Query: 649 TIKYMNVGSGKYMIIKNGNPKVD 671
            +  +N+G+  Y+++++   K  
Sbjct: 346 AVGQINLGNSDYIVVRDNFYKKY 368


>gi|315124037|ref|YP_004066041.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|315017759|gb|ADT65852.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
          Length = 857

 Score = 44.0 bits (102), Expect = 0.096,   Method: Composition-based stats.
 Identities = 66/384 (17%), Positives = 115/384 (29%), Gaps = 76/384 (19%)

Query: 248 RSLEVVEDVSKAIGLAGWDRLDDTKRRRL------LEHLSSRDNALNTKLRKETQ----- 296
           + +E +E  ++A+ +      D+  ++RL      L +L  + NALN++   E       
Sbjct: 417 KDIETLEVENEALKMEN----DEKNQKRLDEIVKELANLKEKQNALNSQFENEKSVFDGI 472

Query: 297 -AQARRID------------------AQLNHGITVKPSELIPLEDYTQAYGVEQGTELYN 337
            A+ + ID                  A+L +G      + + + +       E G  L N
Sbjct: 473 SAKKKEIDLLKNEASLAKARGEFQKAAELEYGKIPSLEKEVEILEDKWKKMSENGVLLKN 532

Query: 338 LQQFKSVAA---PDVA-RIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILE 393
                 VA          ++ M T + +KFL+       S             K    L 
Sbjct: 533 QVDEDLVAGILSKWTGISVQKMLTSEKQKFLEVEKHLKESVIGQD--------KALSALA 584

Query: 394 KSHRQSMQELNQD-----------AISWGIKY--KQIDPLRFDTEESFADSLRQRAGFVK 440
           ++ +++   LN D               G     K +    FD E++             
Sbjct: 585 RAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKFLFDDEKAMIRFDMSEFMEKH 644

Query: 441 KIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIE 500
            +         +    E  +L   + ++P S  V L         D     V +    I 
Sbjct: 645 SVSRLLGAPPGYIGHEEGGELTEAVRRKPYS--VLLFDEVEKAHKD-----VFNVLLGIL 697

Query: 501 DNG-----LSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYNTDHK----SNKFDSL 551
           D+G         V   +       N A   +  +   K+ E     + K        + L
Sbjct: 698 DDGRATDSKGVTVDFKNTIIILTSNIASSAIMNL-SGKEQEDAVKNELKNFFKPEFLNRL 756

Query: 552 YDSYINTPLTKLEQSTAGGNFNKD 575
            D     PL K E         KD
Sbjct: 757 DDIITFNPLGKDEAYEIVKLLFKD 780


>gi|288959380|ref|YP_003449721.1| hypothetical protein AZL_025390 [Azospirillum sp. B510]
 gi|288911688|dbj|BAI73177.1| hypothetical protein AZL_025390 [Azospirillum sp. B510]
          Length = 715

 Score = 44.0 bits (102), Expect = 0.098,   Method: Composition-based stats.
 Identities = 26/241 (10%), Positives = 59/241 (24%), Gaps = 26/241 (10%)

Query: 318 IPLEDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSL 377
           IP      AYG E+G +++   +       DV  + ++      + L     +       
Sbjct: 295 IPEARLVNAYGPERGRQMFAELEATRKLGQDVKTVAMVPPDVQDRLLASYAPDGAGYAGE 354

Query: 378 SLASTMMATKYKEILEKSHRQSMQELNQDAISW----GIKYKQIDPLRFDTEESFADSLR 433
                    +    L ++  +  +   +D  ++      K + +             ++ 
Sbjct: 355 --------RERYGELARAVARDRKNR-EDPAAYVLSNSSKLRDLVAGARTDPTKAQAAVA 405

Query: 434 QRAGFVKKIKDDYNLTTS---HFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKE 490
                         +          +  +    QL   P     D + G   T  +    
Sbjct: 406 LSLTLQADA----GIPEVDRRILPVSMADTAARQLATLPPEARADAVEGMAATYGEHWPR 461

Query: 491 GVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYNTDHKSNKFDS 550
             R   A     G   +  +    +      A  I  G    +         +     D 
Sbjct: 462 VFRELVAQKLPTGYEVLATVQHPTARKELAEAQAI--GRDDLRKAV----DKNAKLVDDG 515

Query: 551 L 551
           +
Sbjct: 516 V 516


>gi|157414793|ref|YP_001482049.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|157385757|gb|ABV52072.1| ATP-dependent CLP protease ATP-binding subunit [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|307747431|gb|ADN90701.1| Chaperone protein clpB [Campylobacter jejuni subsp. jejuni M1]
 gi|315931705|gb|EFV10660.1| chaperone protein clpB [Campylobacter jejuni subsp. jejuni 327]
          Length = 857

 Score = 43.2 bits (100), Expect = 0.17,   Method: Composition-based stats.
 Identities = 63/359 (17%), Positives = 104/359 (28%), Gaps = 68/359 (18%)

Query: 267 RLDDTKRRRLLEHLSSRDNALNTKLRKETQ------AQARRID----------------- 303
           RLD+  +   L +L  + NALN++   E        A+ + ID                 
Sbjct: 440 RLDEIAKE--LANLKEKQNALNSQFENEKSVFDGISAKKKEIDLLKNEASLAKARGEFQK 497

Query: 304 -AQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAA---PDVA-RIKLMSTF 358
            A+L +G      + + + +       E G  L N      VA          ++ M T 
Sbjct: 498 AAELEYGKIPSLEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTS 557

Query: 359 DAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQD-----------A 407
           + +KFL+       S             K    L ++ +++   LN D            
Sbjct: 558 EKQKFLEVEKHLKESVIGQD--------KALSALARAIKRNKAGLNADNKPIGSFLFLGP 609

Query: 408 ISWGIKY--KQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQL 465
              G     K +    FD E++              +         +    E  +L   +
Sbjct: 610 TGVGKTQSAKALAKFLFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGELTEAV 669

Query: 466 VKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNG-----LSAVVRLSSEFSDDAKN 520
            ++P S  V L         D     V +    I D+G         V   +       N
Sbjct: 670 RRKPYS--VLLFDEVEKAHKD-----VFNVLLGILDDGRATDSKGVTVDFKNTIIILTSN 722

Query: 521 AAMVILSGMKHQKDTETRYNTDHK----SNKFDSLYDSYINTPLTKLEQSTAGGNFNKD 575
            A   +  +   K+ E     + K        + L D     PL K E         KD
Sbjct: 723 IASSAIMNL-SGKEQEDVVKNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKD 780


>gi|38234115|ref|NP_939882.1| putative chromosome partition protein [Corynebacterium diphtheriae
           NCTC 13129]
 gi|28375459|emb|CAD66593.1| SMC protein [Corynebacterium diphtheriae]
 gi|38200377|emb|CAE50065.1| Putative chromosome partition protein [Corynebacterium diphtheriae]
          Length = 1161

 Score = 42.9 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 55/317 (17%), Positives = 110/317 (34%), Gaps = 30/317 (9%)

Query: 168 ENYFQRVQSITDHINSLPIDLRLKQKLLSEAKEKLNTNQIIGAHARD--PRVFENFMRAF 225
           EN+ +RV++++    +   +LR     + EA+++LN  + +     D   RV E+     
Sbjct: 700 ENFSRRVEAVSHEAEARKQELRRHALRVQEAQDRLNQLRQLWEETSDRLSRVEED----- 754

Query: 226 YKKGHPPKDSTSLSDVSDSA--RERSLEVVEDVSKAIGLAGWDRLDDTKRRRLLEHLSSR 283
                  + STS  D + +A    RS+EV              RL     +   EH+  R
Sbjct: 755 ---NSEEEPSTSERDKAAAALSHMRSMEVEA------------RLSLRTAQDKAEHIRGR 799

Query: 284 DNALNTKLRKETQAQARRIDAQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKS 343
            + L  +   E QA+AR   A        + + ++  +    A  V+         +  +
Sbjct: 800 GDGLRRQAEYERQARARHDQAVARQRRKAEIASVVAQQCLVVAERVDDALARATQWKENA 859

Query: 344 VAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQEL 403
           +A   V   +      AK  +  +          S A+ +   + +  LE++H + +++L
Sbjct: 860 IAQRGVISAR---VSAAKDTVSALRTNANRLTEKSHAAELSLGQAQVRLEEAHEKIVEQL 916

Query: 404 NQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRT 463
               I+     +   P       +    L+     +  +     L    F   EE     
Sbjct: 917 G---IAISDLMRDYTPHEGFDIGAQRVRLKNAEKDLNALGKVNPLALEEFKALEERYEFL 973

Query: 464 QLVKRPASESVDLIRGA 480
                   ++   + G 
Sbjct: 974 STQLADVEQARRDLHGV 990


>gi|57505126|ref|ZP_00371071.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Campylobacter
           coli RM2228]
 gi|305433063|ref|ZP_07402219.1| chaperone protein ClpB [Campylobacter coli JV20]
 gi|57019101|gb|EAL55816.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Campylobacter
           coli RM2228]
 gi|304443764|gb|EFM36421.1| chaperone protein ClpB [Campylobacter coli JV20]
          Length = 857

 Score = 42.9 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 64/359 (17%), Positives = 107/359 (29%), Gaps = 68/359 (18%)

Query: 267 RLDDTKRRRLLEHLSSRDNALNTKLRKET------QAQARRIDAQLNHGITVK------- 313
           RLD+  +   L +L  + +ALN++   E        A+ + ID+  N  +  K       
Sbjct: 440 RLDEIAKE--LANLKEKQSALNSQFENEKAVFDSISAKKKEIDSLKNEAVFAKNKGEFQK 497

Query: 314 PSEL----IPLEDYTQAYGVEQGTELYNL--QQFKSVAAPDVA---------RIKLMSTF 358
            +EL    IP  +   A   E+  ++          V    VA          ++ M T 
Sbjct: 498 AAELEYGKIPECEKEVANLEEKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTS 557

Query: 359 DAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQD-----------A 407
           + +KFL+       S             K    L ++ +++   LN D            
Sbjct: 558 EKQKFLEVEKHLKESVIGQD--------KALSALARAIKRNKAGLNADNKPIGSFLFLGP 609

Query: 408 ISWGIKY--KQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQL 465
              G     K +    FD E++              +         +    E  +L   +
Sbjct: 610 TGVGKTQSAKALAKFLFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYVGHEEGGELTEAV 669

Query: 466 VKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNG-----LSAVVRLSSEFSDDAKN 520
            ++P S  V L         D     V +    I D+G         V   +       N
Sbjct: 670 RRKPYS--VLLFDEVEKAHKD-----VFNILLGILDDGRATDSKGVTVDFKNTIIILTSN 722

Query: 521 AAMVILSGMKHQKDTETRYNTDHK----SNKFDSLYDSYINTPLTKLEQSTAGGNFNKD 575
            A   +  +   K+ E     + K        + L D     PL K E         KD
Sbjct: 723 IASSAIMNL-SGKEQEDAVKNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKD 780


>gi|3063758|emb|CAA73776.1| heat shock protein [Campylobacter jejuni]
          Length = 857

 Score = 42.9 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 62/351 (17%), Positives = 103/351 (29%), Gaps = 52/351 (14%)

Query: 267 RLDDTKRRRLLEHLSSRDNALNTKLRKETQ------AQARRID----------------- 303
           RLD+  +   L +L  + NALN++   E        A+ + ID                 
Sbjct: 440 RLDEIAKE--LANLKEKQNALNSQFENEKSVFDGISAKKKEIDLLKNEASLAKARGEFQK 497

Query: 304 -AQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAA---PDVA-RIKLMSTF 358
            A+L +G      + + + +       E G  L N      VA          ++ M   
Sbjct: 498 AAELEYGKIPSLEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLAS 557

Query: 359 DAKKFLQKIDDEYISNPSLSLASTMMATKYKEI---LEKSHRQSMQELNQDAISWGIKY- 414
           + +KFL+       S      A + +A   K     L   ++   + L       G    
Sbjct: 558 EKQKFLEVEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGKLLFLGPTGVGKTQS 617

Query: 415 -KQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASES 473
            K +    FD E++              +         +    E  +L   + ++P S  
Sbjct: 618 AKALAKFLFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGELTEAVRRKPYS-- 675

Query: 474 VDLIRGAYNTLSDSDKEGVRSSFAHIEDNG-----LSAVVRLSSEFSDDAKNAAMVILSG 528
           V L         D     V +    I D+G         V   +       N A   +  
Sbjct: 676 VLLFDEVEKAHKD-----VFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730

Query: 529 MKHQKDTETRYNTDHK----SNKFDSLYDSYINTPLTKLEQSTAGGNFNKD 575
           +   K+ E     + K        + L D     PL K E         KD
Sbjct: 731 L-SGKEQEDAVKNELKNFSKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKD 780


>gi|283954202|ref|ZP_06371727.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283794481|gb|EFC33225.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 857

 Score = 42.9 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 64/358 (17%), Positives = 104/358 (29%), Gaps = 66/358 (18%)

Query: 267 RLDDTKRRRLLEHLSSRDNALNTKLRKETQ------AQARRID----------------- 303
           RLD+  +   L +L  + NALN++   E         + + ID                 
Sbjct: 440 RLDEITKE--LANLKEKQNALNSQFENEKSVFDGISTKKKEIDMLKNEASLAKARGEFQK 497

Query: 304 -AQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAA---PDVA-RIKLMSTF 358
            A+L +G      + + + +       E G  L N      VA          ++ M T 
Sbjct: 498 AAELEYGKIPSLEKEVEVLEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTS 557

Query: 359 DAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQD-----------A 407
           + +KFL+       S             K    L ++ +++   LN D            
Sbjct: 558 EKQKFLEVEKHLKESVIGQD--------KALSALARAIKRNKAGLNADNKPIGSFLFLGP 609

Query: 408 ISWGIKY--KQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQL 465
              G     K +    FD E++              I         +    E  +L   +
Sbjct: 610 TGVGKTQSAKALAKFLFDDEKAMIRFDMSEFMEKHSISRLLGAPPGYIGHEEGGELTEAV 669

Query: 466 VKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNG-----LSAVVRLSSEFSDDAKN 520
            ++P S  V L         D     V +    I D+G         V   +       N
Sbjct: 670 RRKPYS--VLLFDEVEKAHKD-----VFNVLLGILDDGRATDSKGVTVDFKNTIIILTSN 722

Query: 521 AAM---VILSGMKHQKDTETRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKD 575
            A    + LSG + +   +       K    + L D     PL K E         KD
Sbjct: 723 IASSAIINLSGKEQEDAVKNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKD 780


>gi|315121929|ref|YP_004062418.1| hypothetical protein CKC_00895 [Candidatus Liberibacter
          solanacearum CLso-ZC1]
 gi|315122891|ref|YP_004063380.1| hypothetical protein CKC_05735 [Candidatus Liberibacter
          solanacearum CLso-ZC1]
 gi|313495331|gb|ADR51930.1| hypothetical protein CKC_00895 [Candidatus Liberibacter
          solanacearum CLso-ZC1]
 gi|313496293|gb|ADR52892.1| hypothetical protein CKC_05735 [Candidatus Liberibacter
          solanacearum CLso-ZC1]
          Length = 129

 Score = 42.9 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 38/76 (50%)

Query: 12 EAVTPNQDAVRDSVNPQAGLRDLGDALGKATQFLEGIRRDNAFATANTRYTELSFKAVQD 71
          E + PNQDAVRD+V+P  GL+ +   L    Q  +  R ++  A A T+    S     D
Sbjct: 12 EPLAPNQDAVRDAVDPLGGLKTVAQGLDSLNQLYQERRSEHIKAQALTQDALHSADDHAD 71

Query: 72 FHDFTNSLDTRDSLQA 87
          F  +  SL T   +QA
Sbjct: 72 FARYMTSLPTGVDVQA 87


>gi|57238288|ref|YP_178631.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni RM1221]
 gi|57167092|gb|AAW35871.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni RM1221]
          Length = 857

 Score = 42.9 bits (99), Expect = 0.21,   Method: Composition-based stats.
 Identities = 62/359 (17%), Positives = 103/359 (28%), Gaps = 68/359 (18%)

Query: 267 RLDDTKRRRLLEHLSSRDNALNTKLRKETQ------AQARRID----------------- 303
           RLD+  +   L +L  + NALN++   E        A+ + ID                 
Sbjct: 440 RLDEIAKE--LANLKEKQNALNSQFENEKSVFDGISAKKKEIDLLKNEASLAKARGEFQK 497

Query: 304 -AQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAA---PDVA-RIKLMSTF 358
            A+L +G      + + + +       E G  L N      VA          ++ M T 
Sbjct: 498 AAELEYGKIPSLEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTS 557

Query: 359 DAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQD-----------A 407
           + +KFL+       S             K    L ++ +++   LN D            
Sbjct: 558 EKQKFLEVEKHLKESVIGQD--------KALSALARAIKRNKAGLNADNKPIGSFLFLGP 609

Query: 408 ISWGIKY--KQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQL 465
              G     K +    FD E++              +         +    E  +L   +
Sbjct: 610 TGVGKTQSAKALAKFLFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGELTEAV 669

Query: 466 VKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNG-----LSAVVRLSSEFSDDAKN 520
            ++P S  V L         D     V +    I D+          V   +       N
Sbjct: 670 RRKPYS--VLLFDEVEKAHKD-----VFNVLLGILDDSRATDSKGVTVDFKNTIIILTSN 722

Query: 521 AAMVILSGMKHQKDTETRYNTDHK----SNKFDSLYDSYINTPLTKLEQSTAGGNFNKD 575
            A   +  +   K+ E     + K        + L D     PL K E         KD
Sbjct: 723 IASSAIMNL-SGKEQEDAVKNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKD 780


>gi|283955934|ref|ZP_06373424.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283792594|gb|EFC31373.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 857

 Score = 42.9 bits (99), Expect = 0.22,   Method: Composition-based stats.
 Identities = 62/359 (17%), Positives = 103/359 (28%), Gaps = 68/359 (18%)

Query: 267 RLDDTKRRRLLEHLSSRDNALNTKLRKETQ------AQARRID----------------- 303
           RLD+  +   L +L  + NALN++   E         + + ID                 
Sbjct: 440 RLDEIAKE--LANLKEKQNALNSQFENEKSVFDDISTKKKEIDLLKNEASLAKARGEFQK 497

Query: 304 -AQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAA---PDVA-RIKLMSTF 358
            A+L +G      + + + +       E G  L N      VA          ++ M T 
Sbjct: 498 AAELEYGKIPSLEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTS 557

Query: 359 DAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQD-----------A 407
           + +KFL+       S             K    L ++ +++   LN D            
Sbjct: 558 EKQKFLEVEKHLKESVIGQD--------KALSALARAIKRNKAGLNADNKPIGSFLFLGP 609

Query: 408 ISWGIKY--KQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQL 465
              G     K +    FD E++              +         +    E  +L   +
Sbjct: 610 TGVGKTQSAKALAKFLFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGELTEAV 669

Query: 466 VKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNG-----LSAVVRLSSEFSDDAKN 520
            ++P S  V L         D     V +    I D+G         V   +       N
Sbjct: 670 RRKPYS--VLLFDEVEKAHKD-----VFNVLLGILDDGRATDSKGVTVDFKNTIIILTSN 722

Query: 521 AAMVILSGMKHQKDTETRYNTDHK----SNKFDSLYDSYINTPLTKLEQSTAGGNFNKD 575
            A   +  +   K+ E     + K        + L D     PL K E         KD
Sbjct: 723 IASSAIMNL-SGKEQEDAVKNELKIFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKD 780


>gi|260807192|ref|XP_002598393.1| hypothetical protein BRAFLDRAFT_128123 [Branchiostoma floridae]
 gi|229283665|gb|EEN54405.1| hypothetical protein BRAFLDRAFT_128123 [Branchiostoma floridae]
          Length = 1869

 Score = 42.5 bits (98), Expect = 0.28,   Method: Composition-based stats.
 Identities = 77/424 (18%), Positives = 161/424 (37%), Gaps = 44/424 (10%)

Query: 155 GLAAAHVLHDPSNENYFQRVQSITDHINSLPIDLRLKQKLLSEAKEKLNTNQIIGAHA-- 212
           GLA A + H  S+E    R Q ++D+INS+  DL ++Q  LSE + +    Q+I   A  
Sbjct: 591 GLARAQMDH--SSELEADRQQKMSDNINSVLDDL-VQQGALSEEESERIQKQLIDREAAL 647

Query: 213 ---RDPRVFENFMRAFYKKGHPPKDSTSLSDVSD------SARERSLEVVEDVSKAIGLA 263
               D R  +N   +  +     +    +  + D       A+    E  ED    I L 
Sbjct: 648 KASMDKR--KNLQASLMRGRMADRKRRRIQQLKDRQGLEREAKMHPTEDEEDSDSVIKLE 705

Query: 264 GWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQARRIDAQLNHGITVKPSELIPLEDY 323
             + + +  RR   E L + +  +  +  +  +  +R +D +  H  ++K ++   L++ 
Sbjct: 706 AGEDVAELDRRHARE-LEALEAQIAAEEAEHLRDISRSLDEE--HTNSLKETQKDVLKNL 762

Query: 324 TQAYGVEQ--GTELYNLQQFKSVAAPDVARIK-LMSTFDAKKFLQKIDDEYISNPSLSLA 380
           +  +GV+     E+ +  +        ++ I+    T D +  L       I++ ++  A
Sbjct: 763 SSKHGVDAVRQQEIMDRFRKDQENLEYMSNIRKERQTQDLQAKLAARKARKIAD-AMRQA 821

Query: 381 STMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFA-------DSLR 433
               A ++ +  EK  +Q  Q   Q+A S G+   Q+ P     E++         D L 
Sbjct: 822 EEDAAKRFIDEQEKQLQQVAQLQQQEA-SAGLVIPQLAPGDSLEEQAIKKEHQRAQDELV 880

Query: 434 QRAGFV-KKIKDDYNLTTSHFNKTE----ENQLRTQLVKRPASESVDLIRGAYNTLSDSD 488
            R     ++++   +         E    E +    L ++   ++ +L   A   L++ +
Sbjct: 881 ARHKDEREELEAKMDQEMRKKEAEERKKFEAEREKALREKKNKQAAEL--AARKDLTEEE 938

Query: 489 KEGVRSSFAH-IEDNGLSAVVRLS-SEFSDDAKNAAMVILSGMKHQKDTETRYNTDHKSN 546
              + ++    +ED         S  + S   K  A          ++ + +   +    
Sbjct: 939 MAALLAAHEQELEDLNDRLDAERSRQQLSLRDKLLARK----RNRLQNKQRKQEAEMTKE 994

Query: 547 KFDS 550
             + 
Sbjct: 995 LLEQ 998


>gi|294867047|gb|ADF46235.1| beta-agarase [Alteromonas sp. X3]
          Length = 529

 Score = 41.3 bits (95), Expect = 0.51,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 79/284 (27%), Gaps = 35/284 (12%)

Query: 386 TKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKIKDD 445
           T+    L  +    +  L  D I           +   +      +   RA  +   + +
Sbjct: 37  TQLNNALTSAQNNGLDTL--DTIKISGTINIYGQIDIKSSVKITGAQTNRASKLT--RRN 92

Query: 446 YNLTTSHFNKTEENQLRT--QLVKRPASESVDLIRGAYNTLSDSD-----KEGVRSSFAH 498
                   N   +N       L    A+ +  L+  A +  S+S           ++   
Sbjct: 93  TGFYNPLINVQYKNVTVENITLEGIGANTNQQLLSLAGDDTSNSALINLPATAYATNPKG 152

Query: 499 IEDNGLSA--VVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYNTDHKSNKFDSLYDSYI 556
                ++        +      ++  +   +     +  E   +        D + D+ +
Sbjct: 153 FTATNVNFFDSAIGVASVGILPQDLNVSYNTFRNINRAVELLRD-------VDRVDDALL 205

Query: 557 NTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNIN 616
           N    K+  +  G          KL       +  N  +N   +  A+ +  GN      
Sbjct: 206 NNAQIKVNGNIIG------LYGGKL-------NISNNLINAENMRLAISLDGGNDGAGFI 252

Query: 617 ESMLMPPRGMSKTDFEDRLWYATKDTGE--YDPYTIKYMNVGSG 658
            S  + P    +  + D+  Y +   GE   +   I Y     G
Sbjct: 253 GSGFLNPWSEKRQTYTDKPVYYSSVIGEAVINNNRIGYYQHTDG 296


>gi|22299310|ref|NP_682557.1| succinoglycan transport protein exoP-like protein
           [Thermosynechococcus elongatus BP-1]
 gi|22295493|dbj|BAC09319.1| tll1767 [Thermosynechococcus elongatus BP-1]
          Length = 740

 Score = 41.3 bits (95), Expect = 0.59,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 77/200 (38%), Gaps = 15/200 (7%)

Query: 246 RERSLEVVEDVSKAIGLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQARRIDAQ 305
           R+R  E+V  V KA+  A  D     ++ +L   L   D+ +N  L +  + Q R+  A 
Sbjct: 179 RDRQPEMVTAVLKAVAEAFVDYSQRDRQEQLNRTLKQLDSHINQHLTELEELQ-RQFQAG 237

Query: 306 LNHGITVKPSELIPL--EDYTQAYGVEQ-----GTELYNLQQFKS----VAAPDVARIKL 354
              G +++PSE +    E Y Q + + Q       E Y   Q       +   +      
Sbjct: 238 QTQGTSLQPSEQLRFLTEQYRQIHSLRQAARLKAVEAYGRFQGFQEQLKMTPAEALAAAN 297

Query: 355 MSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKY 414
           +ST  A +       E     + +LA     T   + LE+  R  +++L   A       
Sbjct: 298 LSTSPAYQQQLARIQELDQEIAKNLAIFREGTPILQALEEQRRVLLEQLQAIARQV---I 354

Query: 415 KQIDPLRFDTEESFADSLRQ 434
            Q  P+   T  +F  ++ Q
Sbjct: 355 GQQYPVDNPTALAFQGTVSQ 374


>gi|294782075|ref|ZP_06747401.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA]
 gi|294480716|gb|EFG28491.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA]
          Length = 464

 Score = 41.3 bits (95), Expect = 0.63,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 53/150 (35%), Gaps = 6/150 (4%)

Query: 542 DHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVS 601
                +   L +SY        E   +  ++ KD +  K+     + ++ ++  N     
Sbjct: 215 KANRKRIKFLANSYKKNSQVVYEYPLSPNSYFKDDDGTKINYFDFLVNN-SFNYNSDIAK 273

Query: 602 DAMQIVLGNTPVNINESMLMPPRGMSKTDFEDRLWYATKDTGEYDPYTIKYMNVGSGKYM 661
             ++IV     +N N  +      +      +R+   TK+   +    +    +   K +
Sbjct: 274 SIVKIVPKLIELNNNGGIYDILDKLDGMIIPERIEVITKEL-NFKVDEMFIPTLEISKEL 332

Query: 662 IIKNGNPKVDKEGKTIIINVEDVNRDERME 691
           + K  +  + K+         + N++E+ E
Sbjct: 333 LNKEIDKFMLKDYS----RFNEYNKEEKRE 358


>gi|326670102|ref|XP_001922712.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Danio
            rerio]
          Length = 3584

 Score = 40.9 bits (94), Expect = 0.65,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 78/271 (28%), Gaps = 32/271 (11%)

Query: 354  LMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAI---SW 410
             +  F  K+++  + ++    P   +       + K+     H   +   ++      S 
Sbjct: 860  NVPQFSQKRYVVAVREDVR--PHSEILRISATDQDKDGNAAVHYNIISGNSRGQFAIDSV 917

Query: 411  GIKYKQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNL----------TTSHFNKTEENQ 460
              + + + PL F+TE  +   LR +      + ++  +              F  T    
Sbjct: 918  TGEIQVVAPLDFETEREYTLRLRAQDNGRPPLSNNTGIVSVQVTDVNDNPPIFVSTPFQA 977

Query: 461  LRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIE-----DNGLSAVVRLSS--- 512
              T L   P   S+  I+       D+ +   R +    +     +     V   S    
Sbjct: 978  --TVLESAPIGHSILHIQAIDTDNGDNARLEYRLTGTGTDTPFVINAATGWVTVSSELDR 1035

Query: 513  ------EFSDDAKNAAMVILSGMKHQKDTETRYNTDHKSNKFDSLYDSYINTPLTKLEQS 566
                   F  +A++     LS       T    N + +       Y   +N         
Sbjct: 1036 ESVEHYFFGVEARDYGSPPLSATASVTITVMDVNDN-RPEFLQKEYYVRLNEDAAVGTSV 1094

Query: 567  TAGGNFNKDKEAIKLYLLGSMKDSGNYTLNR 597
             +    ++D  +   Y +        + ++ 
Sbjct: 1095 VSVTAVDRDVNSAVTYQITGGNTRNRFAIST 1125


>gi|159570762|emb|CAP19588.1| cadherin, EGF LAG seven-pass G-type receptor 3 [Danio rerio]
 gi|169145650|emb|CAQ14037.1| cadherin, EGF LAG seven-pass G-type receptor 3 [Danio rerio]
 gi|169158045|emb|CAQ13975.1| cadherin, EGF LAG seven-pass G-type receptor 3 [Danio rerio]
          Length = 2065

 Score = 40.9 bits (94), Expect = 0.65,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 78/271 (28%), Gaps = 32/271 (11%)

Query: 354 LMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAI---SW 410
            +  F  K+++  + ++    P   +       + K+     H   +   ++      S 
Sbjct: 256 NVPQFSQKRYVVAVREDVR--PHSEILRISATDQDKDGNAAVHYNIISGNSRGQFAIDSV 313

Query: 411 GIKYKQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNL----------TTSHFNKTEENQ 460
             + + + PL F+TE  +   LR +      + ++  +              F  T    
Sbjct: 314 TGEIQVVAPLDFETEREYTLRLRAQDNGRPPLSNNTGIVSVQVTDVNDNPPIFVSTPFQA 373

Query: 461 LRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIE-----DNGLSAVVRLSS--- 512
             T L   P   S+  I+       D+ +   R +    +     +     V   S    
Sbjct: 374 --TVLESAPIGHSILHIQAIDTDNGDNARLEYRLTGTGTDTPFVINAATGWVTVSSELDR 431

Query: 513 ------EFSDDAKNAAMVILSGMKHQKDTETRYNTDHKSNKFDSLYDSYINTPLTKLEQS 566
                  F  +A++     LS       T    N + +       Y   +N         
Sbjct: 432 ESVEHYFFGVEARDYGSPPLSATASVTITVMDVNDN-RPEFLQKEYYVRLNEDAAVGTSV 490

Query: 567 TAGGNFNKDKEAIKLYLLGSMKDSGNYTLNR 597
            +    ++D  +   Y +        + ++ 
Sbjct: 491 VSVTAVDRDVNSAVTYQITGGNTRNRFAIST 521


>gi|118385975|ref|XP_001026110.1| hypothetical protein TTHERM_00971900 [Tetrahymena thermophila]
 gi|89307877|gb|EAS05865.1| hypothetical protein TTHERM_00971900 [Tetrahymena thermophila SB210]
          Length = 2536

 Score = 40.9 bits (94), Expect = 0.67,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 10/176 (5%)

Query: 390  EILEKSHRQSMQELNQDAISWGIKYKQI--DPLRFDTEESFADSLRQRAGFVKKIKDDYN 447
            +I E +   +  E NQ+     I+ KQI    ++       +   +       +IK  Y 
Sbjct: 2251 DINESNATLNQVEKNQEDNEKQIELKQIFSKEIQASQNNHPSPLYKHTQDKQGQIKPIYG 2310

Query: 448  LTTSHFNKTEENQLRTQLVKRPASE----SVDLIRGA--YNTLSDSDKEGVRSSFAHIED 501
             + + FN+TE  QL+ Q  K  A +    S   + G     TLSD + +  ++++    +
Sbjct: 2311 NSKTIFNQTESLQLQNQDEKSNADQYYVDSNKFLMGIQPKKTLSDINFQQNQNAYYK-SN 2369

Query: 502  NGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYNTDHKSNKFDSLYDSYIN 557
            N     +  + E     ++     L+      +  + + T++ + +   ++DS IN
Sbjct: 2370 NKKQLYIEEADEIQYTQQDEKSENLNEQNEF-NLRSPHYTENSTQRNQYVFDSKIN 2424


>gi|57505852|ref|ZP_00371777.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Campylobacter
           upsaliensis RM3195]
 gi|57015882|gb|EAL52671.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Campylobacter
           upsaliensis RM3195]
          Length = 857

 Score = 40.9 bits (94), Expect = 0.67,   Method: Composition-based stats.
 Identities = 67/379 (17%), Positives = 115/379 (30%), Gaps = 66/379 (17%)

Query: 248 RSLEVVEDVSKAIGL----AGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQA------ 297
           + LE +E   +A+ +    A   RL++  +   L +L    NALN +   E         
Sbjct: 417 KELETLEVEKEALKMEQNEANEKRLEEIAKE--LANLKEEQNALNAQFENEKSVFDSISV 474

Query: 298 QARRID------------------AQLNHG-ITVKPSELIPLEDYTQAYGVEQGTELYNL 338
           + + ID                  A+L +G I     E++ LE+  Q      G  L N 
Sbjct: 475 KKKEIDTLKNEANLAKNKGDFQKAAELEYGQIPSLEKEVLSLEEKWQLLSQN-GVLLKNK 533

Query: 339 QQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQ 398
                VA      +   +    +K L+    +++        S +   K    L K+ ++
Sbjct: 534 VDEDLVAG----ILSKWTGISVQKMLKSEKQKFLEVEKHLKESVIGQDKALNALAKAIKR 589

Query: 399 SMQELNQD-----------AISWGIKY--KQIDPLRFDTEESFADSLRQRAGFVKKIKDD 445
           +   LN+D               G     K +    FD E++              +   
Sbjct: 590 NKAGLNEDSKPIGSFLFLGPTGVGKTQSAKALAKFLFDDEKAMIRFDMSEFMEKHSVSRL 649

Query: 446 YNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDN--- 502
                 +    E  +L   + ++P S  V L         D     V +    I D+   
Sbjct: 650 LGAPPGYIGHEEGGELTEAVRRKPYS--VILFDEIEKAHKD-----VFNILLGILDDARA 702

Query: 503 --GLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYNTDHK----SNKFDSLYDSYI 556
                  V   +       N A   +  +K  K+ E     + K        + L D   
Sbjct: 703 TDSKGVSVDFKNTIIILTSNIASSAIMNLK-GKEQEEAVKAELKNFFKPEFLNRLDDIIT 761

Query: 557 NTPLTKLEQSTAGGNFNKD 575
             PL + E         KD
Sbjct: 762 FNPLGENEAYEIVKLLFKD 780


>gi|239979653|ref|ZP_04702177.1| penicillin-binding protein [Streptomyces albus J1074]
          Length = 734

 Score = 40.9 bits (94), Expect = 0.75,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 83/279 (29%), Gaps = 33/279 (11%)

Query: 254 EDVSKAIGLAGWDRL--DDTKRRRLLEHLSSRDNALNTKLRKETQAQARRIDAQLNHG-I 310
           E+   ++   GW      D K++R LE   S D++LN KL      +AR++DA++  G  
Sbjct: 298 EEAQTSVEAGGWTMTLNIDKKKQRELER--SVDSSLNDKL----DPKARKVDARVQTGAA 351

Query: 311 TVKPSELIPLEDYTQAYGVEQGTE--LYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKID 368
           +V P            YG     E  L N  +     A     + L S  + K   Q   
Sbjct: 352 SVDPRN----GKVLALYGGRDYIEHQLSNATRRDYQVASTFKPLILASALENKATTQDGR 407

Query: 369 DEYISNPSLSLASTMMATKYKEILEKSHRQS-----------MQELNQDAISWGIKYKQI 417
                      +   +          +                + +N      G+     
Sbjct: 408 PVTAGTIYDGTSERPLEGSPTPYAPPNEDDVDYGPVTVQKAMNKSINSVFAQMGVDVGMD 467

Query: 418 DPLRFD-----TEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKR-PAS 471
             ++         E       Q  G +     +     + F    +      L       
Sbjct: 468 KVMKTAGDLGMDVEGLEAVPAQTLGSMGASPLEMAGVYATFANHGKLVTPAVLKSAENRD 527

Query: 472 ESVDLIRGAY-NTLSDSDKEGVRSSFAHIEDNGLSAVVR 509
            +VDL +      +  S  + V S    + D+G  A VR
Sbjct: 528 RTVDLPKAVGEQVIKRSTADSVTSVLTGVVDDGTGAAVR 566


>gi|114566147|ref|YP_753301.1| signal transduction histidine kinase-like protein [Syntrophomonas
            wolfei subsp. wolfei str. Goettingen]
 gi|114337082|gb|ABI67930.1| multi-sensor hybrid histidine kinase [Syntrophomonas wolfei subsp.
            wolfei str. Goettingen]
          Length = 1442

 Score = 40.9 bits (94), Expect = 0.82,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 53/166 (31%), Gaps = 5/166 (3%)

Query: 363  FLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRF 422
            F+     E     + +    M   +   I+      +M+   +  +  G+      P+ F
Sbjct: 1259 FMDCQMPEMDGYETTARIRQMEGEERHTIIVAMTANAMEGDREKCLQAGMDDYISKPVDF 1318

Query: 423  DTEESFADSLRQRAG-FVKKIKDDYNLTTSHFNKTEENQLRT--QLVKRPASESVDLIRG 479
                +  +    R    V ++        S F            +L  +  S    ++  
Sbjct: 1319 QLLFNIIEQYTARQQESVSEVAAMLEENLSSFIAETGLSKGEGRELYDKLWSTLPGVLEE 1378

Query: 480  AYNTLSDSDKEGVRSSFAHIEDNGLSAVVR--LSSEFSDDAKNAAM 523
              N L++SD + +RS    ++ +  +  ++      F  + K  A 
Sbjct: 1379 LQNALANSDFKKIRSLAHQLKGSSGTLRIQKLYELFFDLEQKAIAE 1424


>gi|291451518|ref|ZP_06590908.1| penicillin-binding protein [Streptomyces albus J1074]
 gi|291354467|gb|EFE81369.1| penicillin-binding protein [Streptomyces albus J1074]
          Length = 760

 Score = 40.9 bits (94), Expect = 0.83,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 83/279 (29%), Gaps = 33/279 (11%)

Query: 254 EDVSKAIGLAGWDRL--DDTKRRRLLEHLSSRDNALNTKLRKETQAQARRIDAQLNHG-I 310
           E+   ++   GW      D K++R LE   S D++LN KL      +AR++DA++  G  
Sbjct: 324 EEAQTSVEAGGWTMTLNIDKKKQRELER--SVDSSLNDKL----DPKARKVDARVQTGAA 377

Query: 311 TVKPSELIPLEDYTQAYGVEQGTE--LYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKID 368
           +V P            YG     E  L N  +     A     + L S  + K   Q   
Sbjct: 378 SVDPRN----GKVLALYGGRDYIEHQLSNATRRDYQVASTFKPLILASALENKATTQDGR 433

Query: 369 DEYISNPSLSLASTMMATKYKEILEKSHRQS-----------MQELNQDAISWGIKYKQI 417
                      +   +          +                + +N      G+     
Sbjct: 434 PVTAGTIYDGTSERPLEGSPTPYAPPNEDDVDYGPVTVQKAMNKSINSVFAQMGVDVGMD 493

Query: 418 DPLRFD-----TEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKR-PAS 471
             ++         E       Q  G +     +     + F    +      L       
Sbjct: 494 KVMKTAGDLGMDVEGLEAVPAQTLGSMGASPLEMAGVYATFANHGKLVTPAVLKSAENRD 553

Query: 472 ESVDLIRGAY-NTLSDSDKEGVRSSFAHIEDNGLSAVVR 509
            +VDL +      +  S  + V S    + D+G  A VR
Sbjct: 554 RTVDLPKAVGEQVIKRSTADSVTSVLTGVVDDGTGAAVR 592


>gi|222823717|ref|YP_002575291.1| protein disaggregating chaperone ClpB [Campylobacter lari RM2100]
 gi|222538939|gb|ACM64040.1| protein disaggregating chaperone ClpB [Campylobacter lari RM2100]
          Length = 857

 Score = 40.5 bits (93), Expect = 0.87,   Method: Composition-based stats.
 Identities = 82/465 (17%), Positives = 146/465 (31%), Gaps = 67/465 (14%)

Query: 164 DPSNENYFQRVQSITDHINSLPIDLR-LKQKLLSEAKEKLNTNQIIGAHARDPRVFENFM 222
           D + +  FQ V      +N     LR +K+KL       +N + ++ A     R   N  
Sbjct: 326 DAALQRRFQPVNVAEPSVNEALAMLRGIKEKLEIHHNVTINDSALVAAAKLSKRYIAN-- 383

Query: 223 RAFYKKGHPPKDSTS------LSDVSDSARE--RSLEVVEDVSKAIGL----AGWDRLDD 270
           R    K     D  +      +    +S R+  + +E +E  ++A+ +    A   RL++
Sbjct: 384 RFLPDKAIDLIDEAAAELKMQIESEPNSLRKVRKQIESLEVENEALKMEENEANEKRLEE 443

Query: 271 TKRRRLLEHLSSRDNALNTKLRKET------QAQARRIDAQLNHGITVK----------- 313
            K+   L +L      LN K   E        A+ + ID   N  I  K           
Sbjct: 444 IKKE--LANLKEEQIKLNAKFENEKAVFNGISAKKKEIDTLKNEAILAKNKGDFQKAAEI 501

Query: 314 --------PSELIPLEDYTQAYGVEQGTELYNLQQFKSVAA---PDVA-RIKLMSTFDAK 361
                     E++ LE+       ++G  L N      VA          ++ M T + +
Sbjct: 502 EYGKILECEKEVLNLEE-KWKQMTQEGVLLKNQVDEDLVAGILSKWTGISVQKMLTSEKQ 560

Query: 362 KFLQKIDDEYISNPS--LSLASTMMATKYKEI-LEKSHRQSMQELNQDAISWGI--KYKQ 416
           K+L   +    S      +L++   A K  +  L ++ +     L       G     K 
Sbjct: 561 KYLHIQEYLQESVVGQDEALSALARAIKRNKAGLNQATKPIGSFLFLGPTGVGKTESAKA 620

Query: 417 IDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDL 476
           +    FD E++              I         +    E  +L   + ++P S  V L
Sbjct: 621 LAKFLFDDEKAMVRFDMSEFMEKHSISRLLGAPPGYIGHEEGGELTEAVRRKPYS--VIL 678

Query: 477 IRGAYNTLSDSDKEGVRSSFAHIEDNG-----LSAVVRLSSEFSDDAKNAAMVILS---G 528
                    D     V +    I D+G         V  ++       N     +    G
Sbjct: 679 FDEVEKAHKD-----VFNILLGILDDGRATDSKGVTVDFTNTIIILTSNIGANFIMELKG 733

Query: 529 MKHQKDTETRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFN 573
            + +K  +    +  +    + L D     PL + E         
Sbjct: 734 EEREKAIKEALRSFFRPEFLNRLDDIITFNPLGESEAEKIVKLLF 778


>gi|301612111|ref|XP_002935566.1| PREDICTED: protein-glutamine gamma-glutamyltransferase 6-like
           [Xenopus (Silurana) tropicalis]
          Length = 703

 Score = 40.5 bits (93), Expect = 0.97,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 62/200 (31%), Gaps = 20/200 (10%)

Query: 327 YGVEQGTELYNLQQFKSVAAPDVAR--IKLMSTFDAKKFLQKIDDEYISNPSLSLASTMM 384
           YG         L          ++   +   S  D     Q    E       SL     
Sbjct: 398 YGRRNDGTFSILYTDTRKVGQYISTKAVGNFSRQDVTD--QYKFPEGSKEERDSLHKAQG 455

Query: 385 ATKYKEILEKSHRQSMQ-----ELNQDAISWGIKYKQIDPLRFDTE----ESFADS--LR 433
            T   + +  + R+          ++  I    K + I   +   E    + F  +  L+
Sbjct: 456 LTARSDRVMLASRRLNATAARVVEDKPPIQEAPKPEIIGTFKLSGELQVGQDFTVTLNLK 515

Query: 434 QRAGFVKKIKDDYNLTTSHFNKTEENQL---RTQLVKRPASESVDLIRGAYNTLSD--SD 488
                 K++   + LT   +N+T   ++      +   P  E V  I   Y       + 
Sbjct: 516 NPTSSKKQVNAKWTLTAIVYNRTPVKEILSDSQSVTLAPNEEKVIEITVLYPQYEKALTP 575

Query: 489 KEGVRSSFAHIEDNGLSAVV 508
              +R+S   +E+NG S +V
Sbjct: 576 DNMIRASAVCVEENGGSLLV 595


>gi|269975273|gb|ACZ55497.1| phage conserved protein [Staphylococcus phage SA1]
          Length = 737

 Score = 40.5 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 32/280 (11%), Positives = 84/280 (30%), Gaps = 19/280 (6%)

Query: 349 VARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKY-KEILEKSHRQSMQELNQDA 407
           +A    + +     +LQ   +  +        S     +  ++ +E   ++   +L   A
Sbjct: 218 IAENARLKSVKEAAWLQDRANASLRQLVGGFVSAYALLELSQKTIEAGVKRQSAQLASTA 277

Query: 408 ISWGIKYKQI----DPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRT 463
           I +G   +Q             +++ D+++Q + F    +       +            
Sbjct: 278 I-FGADTQQARMFAASFAHQIGQNYTDTIKQYSNFAAGAQPTLGFQGTQEFYKNAAMFAR 336

Query: 464 QLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAM 523
              +    E +  I  A+  ++   K         + D    AV   +       +    
Sbjct: 337 I--RGATDEDLKGIMVAFQQMASKGKVQAEELRGQLGDRLAGAVQLFADAIGKTPQELDK 394

Query: 524 VILSGMKHQKDTETRYNTDHKSNKFDSLY--DSYINTPLTKLEQSTAGGN-----FNKDK 576
           ++  G    KD      ++  +         ++      T + Q+ A  +        + 
Sbjct: 395 LMQDGKLLAKDV-LPKVSERMAELVQQAGGMNAVSKQTATSMGQAKAMWDNTLVALFNNS 453

Query: 577 EAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNIN 616
                 L  S+     +    +  ++A+ +V+GN     +
Sbjct: 454 SEGISQLSNSVAM---FLQGSMGTTEALGVVIGNLLKGAS 490


>gi|221487158|gb|EEE25404.1| conserved hypothetical protein [Toxoplasma gondii GT1]
          Length = 1141

 Score = 40.5 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 77/464 (16%), Positives = 140/464 (30%), Gaps = 69/464 (14%)

Query: 191 KQKLLSEAKEKLNTNQIIGAHARDPRVFENFMRAFYKKGHPPKDS--TSLSDVSDSARE- 247
           KQ+LL   +E L    +       P V +   R         KDS     +++  + RE 
Sbjct: 271 KQELLKFKEEHLPLRNL-------PEVLDELGRRIQANASTQKDSQLAFQAELCQNQREY 323

Query: 248 ----RSLEVVEDVSKAIGLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQARRID 303
                 LE +E+ S+A      + L      RLLE     ++ L T+  +ET        
Sbjct: 324 RDLRDRLENMEEQSRAHIKTNHETL------RLLE-----EHKLATQQLRET-------- 364

Query: 304 AQLNHGITVKPSELIPLEDY---TQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDA 360
               H   ++  EL   +++      +   Q  E+    Q    A  ++ R  LMS    
Sbjct: 365 ----HEELLRAQELRLRDEFQLQLAEFSKNQSQEVSTQMQDLRKALDELRRETLMS---Q 417

Query: 361 KKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPL 420
           +K  +    + +   +    S      +KE+     +Q      QD+++     ++    
Sbjct: 418 QKASEPERLDLMREAAEKRCSEGEQQLWKELEVIKKQQVELLRQQDSLAHQKSQQEKAER 477

Query: 421 RFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVD----- 475
                E     +  R       +  Y    +  + T  +       + P   S       
Sbjct: 478 VEKKLEDIRSFVSDREKDA---QKHYLDLMAALSCTASSSPSNGHFRAPLYSSSQKEVAL 534

Query: 476 --------LIRGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILS 527
                        +   + S  E    S + +  NG S  V  S       + A  V  S
Sbjct: 535 HAALLLRCTFDAIHAAATASFSEESSCSDSQVPRNGTSVSVEASD------RQAVAVARS 588

Query: 528 GMKHQKDTETRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSM 587
             +  +D      +D          D   N  +T   ++      N    +      G  
Sbjct: 589 AEEGAEDIPL-KRSDSTDTSAGQSTDRLANR-MTPASETFLAAGANAALGSRVDSPRGEA 646

Query: 588 KDSGNYTLNRVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDF 631
            D  N          A++     +      S ++ P G  ++ F
Sbjct: 647 SD--NSAALGQSWKAAVRTSQAASSGVGGTSGVLSPGGELESAF 688


>gi|212710806|ref|ZP_03318934.1| hypothetical protein PROVALCAL_01874 [Providencia alcalifaciens DSM
           30120]
 gi|212686503|gb|EEB46031.1| hypothetical protein PROVALCAL_01874 [Providencia alcalifaciens DSM
           30120]
          Length = 1122

 Score = 40.5 bits (93), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 77/290 (26%), Gaps = 25/290 (8%)

Query: 342 KSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQ 401
             V   D+  IK       +      +D  I + +   +     ++ ++   +       
Sbjct: 9   NDVMGADIGSIKQPEPQYGES-----NDVGILDAANPFSDKNEVSRLRDAAFRIDNSVGS 63

Query: 402 ELNQDAISWGIKYKQIDPLR----FDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTE 457
            +     +   +    +P          E FAD+        +       +         
Sbjct: 64  LIATMPFNQFEEQDGYNPFDDERTLSGYEDFADAFIHSKSPEETSAIKQRINRQI----- 118

Query: 458 ENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDD 517
             Q R  L     +    LI      + D          A     G   +   S     +
Sbjct: 119 --QDRQLLQDAGGA---GLISSIAMGVIDPINVAAMMVPAGTIARGGDVLATASKFAVSN 173

Query: 518 AKN--AAMVILSGMKHQKDTETRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKD 575
           A    A+ + LS     ++T T   +         L     +       +      F  D
Sbjct: 174 ALGGVASELALSAT---QETRTLEESALNVTFDAMLGGLLGSAAQLVKNRGQIVSKFKND 230

Query: 576 KEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINESMLMPPRG 625
               +  +  ++ D+ +     V  +   Q  L   P  IN +M + P G
Sbjct: 231 VLGEQQTIQQNIPDNTSVGAMEVPETTLEQETLKG-PSFINRTMNVSPVG 279


>gi|332533810|ref|ZP_08409666.1| putative phage protein [Pseudoalteromonas haloplanktis ANT/505]
 gi|332036741|gb|EGI73204.1| putative phage protein [Pseudoalteromonas haloplanktis ANT/505]
          Length = 1098

 Score = 40.2 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/268 (11%), Positives = 82/268 (30%), Gaps = 46/268 (17%)

Query: 312 VKPSELIPLEDYTQAYGVEQGTELYNLQQF--KSVAAPDVAR---IKLMSTFDAKKFLQK 366
           V+P  ++ ++   QAY  + G  + +      +  ++  +A    I   +       ++ 
Sbjct: 684 VQPQTMV-MQSADQAYSRDYGQSVISKASAPAQQASSQYIAPNSPINYAAPK-VTAIVET 741

Query: 367 IDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQEL--NQDAISWGIKYKQIDPLRFDT 424
            +    +    + A+        +    +  + M E     DA  +  +     P     
Sbjct: 742 EEPRTQALAGPAAAN--------DPAYSAQPKVMTEREAANDAFKFTSQRLPAVPTDSTA 793

Query: 425 EESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTL 484
             +     R +A           +  +  ++       + +     S +           
Sbjct: 794 PLNLQAQARSQAL----------INNAFPSEQNNAVNNSAVTSSAVSAT----------- 832

Query: 485 SDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKD-----TETRY 539
            ++    V S+    ++N   A   ++S  +    NAA  I +     ++     T +  
Sbjct: 833 QNNAATAVNSATNATQNN---AATAINSATNTTQSNAATAIDNATNATQNNAATVTNSAT 889

Query: 540 NTDHKSNKFDSLYDSYINTPLTKLEQST 567
           +T   +    S+ ++  N+       + 
Sbjct: 890 STKALAAVNSSVNNATQNSLAPAAIAAQ 917


>gi|195027149|ref|XP_001986446.1| GH21371 [Drosophila grimshawi]
 gi|193902446|gb|EDW01313.1| GH21371 [Drosophila grimshawi]
          Length = 1525

 Score = 40.2 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 63/411 (15%), Positives = 116/411 (28%), Gaps = 70/411 (17%)

Query: 305 QLNHGITVKPSELIPLE---DYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAK 361
           Q+ + +T+K  +++  E   DYT    V    EL    Q K         I   +   + 
Sbjct: 371 QIGNEVTIKLGKMLDYEAITDYTLTMSVRNTFELATEHQIKIKVEDVNDNIPFFTEVKSG 430

Query: 362 KFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLR 421
             L+                 +M  +  ++        +     D       Y  IDP  
Sbjct: 431 TILENEPPGT----------PVMQVRAFDMDGTPANNIITFELAD----NTDYFAIDPQT 476

Query: 422 FDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLV--------KRPASES 473
            +          +R  +  K+    N  +S FN  + N                +P  + 
Sbjct: 477 GNITALTTFDREERDFYNVKVSATDNSPSSLFNNGDHNHGYQVFRISIGDKNDHKPHFQQ 536

Query: 474 VDLIRGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQK 533
              +    + L +             ED   ++ +  S E      N       G+K  K
Sbjct: 537 TTYLA---DKLLEDANTNYEVIEVKAEDEDNASQIVYSIESG----NVGDAFKIGLKTGK 589

Query: 534 -------DTETRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGS 586
                  D ET    + K   FD +YD Y  T + K+E         K + +I +     
Sbjct: 590 ITVNQRLDYETITEYELKVRAFDGIYDDYA-TVVVKIEDVNDNPPLFKKEYSITIQEGPV 648

Query: 587 MKDS------------GNYTLNRVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDFEDR 634
             +              + T ++      ++          N   L   + + +      
Sbjct: 649 QSNECILIIEAYDPDIKDRTADQHITYSIVKEDHKRLLTIDNSGCLRLIQPLDRD----- 703

Query: 635 LWYATKDTGEYDPYTIKYMNVGSGKYMIIKNGNPKVDKEGKTIIINVEDVN 685
                   G      +   +   G    +K+         K +II +ED+N
Sbjct: 704 -----PPNGHKSWQVLISASDQDGVGTTLKSV--------KPVIITLEDIN 741


>gi|303231586|ref|ZP_07318311.1| ABC transporter, substrate-binding protein, QAT family [Veillonella
           atypica ACS-049-V-Sch6]
 gi|302513749|gb|EFL55766.1| ABC transporter, substrate-binding protein, QAT family [Veillonella
           atypica ACS-049-V-Sch6]
          Length = 511

 Score = 40.2 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 69/223 (30%), Gaps = 29/223 (13%)

Query: 434 QRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESV---DLIRGAYNTLSDSDKE 490
           +R G V  I     +    +   + + +   +  +P +E +   D+++      +D   E
Sbjct: 217 KRIGIVASIVIISGIGVFMWPSQQSDVI--HVATKPMTEQLILGDMLKLLIEQDTDLTVE 274

Query: 491 GVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYNTDHKSNKFDS 550
                      + +   +  S +F    +              +   + +T +  N FD 
Sbjct: 275 VTAGVGGGT--SNIQPAME-SGQFDIYPEY--------TGTGWNAVLKRDTQYSENLFDE 323

Query: 551 LYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGN 610
           L  +Y +T   K         FN       + +   + +  N          + Q++LG 
Sbjct: 324 LQRAYEDTYQFKWVGM---YGFNN---TYGMAVRKDIANKYNLKTYSDLARVSSQLILGG 377

Query: 611 TPVNINESM----LMPPRGMSKTDFEDR---LWYATKDTGEYD 646
                        L    GM   D +D    L Y   ++G  D
Sbjct: 378 EYDFFGRQDGYSGLQRVYGMDFKDTKDMDIGLKYQAIESGHVD 420


>gi|300871846|ref|YP_003786719.1| DNA-directed RNA polymerase omega subunit family protein-like protein
            [Brachyspira pilosicoli 95/1000]
 gi|300689547|gb|ADK32218.1| DNA-directed RNA polymerase, omega subunit family protein-like
            protein [Brachyspira pilosicoli 95/1000]
          Length = 5567

 Score = 40.2 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 86/419 (20%), Positives = 162/419 (38%), Gaps = 81/419 (19%)

Query: 33   DLGDALGKATQFLEGIRRDN--AFATANTRYTELS--FKAVQDFHD----FTNSLDTR-- 82
            +L + L K  +  E  + +N   F+T     T++S    ++ D  D    FT+ L+ R  
Sbjct: 3834 ELSEELKKIEESFELFKSNNNDIFSTLEEYKTKISSIVDSLSDIEDNNLNFTSRLEKRIE 3893

Query: 83   ---DSLQAGDKIKEYVDGRIRSAYDRFLSSISHRDVRKKFQAQVEHDIRDYHTKGVDIQI 139
               DS   GDKIKE     I    D F S     D+  KF+   E           +++I
Sbjct: 3894 FFEDSWGDGDKIKELYSDFIAEKADSFKS-----DLEVKFRDSFEE---------FNLKI 3939

Query: 140  GATQRAQEDNLNMTVGLAAAHVLHDPSNENYFQRVQSITDHINSLPIDLRLKQKLLSEA- 198
               ++   D++N  +         D  N    +R++SI++ IN+L  DL  K   + EA 
Sbjct: 3940 DNVEKNFADSINSIIESL------DKENLTSNERLESISNTINNLKSDLENKIVSIEEAN 3993

Query: 199  -KEKLNTNQIIGAHARDPRVFENFMRAFYKKGHPPKDSTSLSDVSDSARERSLEVVEDVS 257
             K KL  +  +        +FEN M AF  +         + DV DS    + ++ + V+
Sbjct: 3994 DKSKLFIDDKLS-------IFENKMEAFEDR---------IKDVEDSQHYLNNDITQYVN 4037

Query: 258  KAIG-LAGWDRLDDTKRRRLLEHLSSRD-----NALNT-------------------KLR 292
            +    L  ++   DTK   L   LS+       N +++                   +L+
Sbjct: 4038 RLDKVLNDYEEAIDTKINNLKNSLSNESGHVEHNLISSLELSNELAKDKKELLDSIHELK 4097

Query: 293  KETQAQARRIDAQLNHGITVKPSEL---IPLEDYTQAYGVEQGTELYNLQQ--FKSVAAP 347
            K+      R DAQ+N   +   +E+   IP  +      V +   + N  +     +   
Sbjct: 4098 KDVYETIERKDAQMNEEFSKFKTEIIESIPSMEDISDLFVSEKNNIVNEFEGFKNEILTS 4157

Query: 348  DVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQD 406
            +      M   +  K ++++D+   +     ++++     +K    K+  + + +   +
Sbjct: 4158 NNKNFADMFEEEKNKLIEELDNFKSAIRVEYMSNSDKIDAFKNEYLKNFNEIIDKEKAN 4216


>gi|154301924|ref|XP_001551373.1| hypothetical protein BC1G_10199 [Botryotinia fuckeliana B05.10]
 gi|150855591|gb|EDN30783.1| hypothetical protein BC1G_10199 [Botryotinia fuckeliana B05.10]
          Length = 864

 Score = 40.2 bits (92), Expect = 1.4,   Method: Composition-based stats.
 Identities = 59/374 (15%), Positives = 129/374 (34%), Gaps = 52/374 (13%)

Query: 227 KKGHPPKDSTSLSDVSDSARERSLEVVEDVSKAIG-------LAGWDRLDDTKRRRLLEH 279
           K G P K +  +  ++D     + E ++D++K I        + G D  DD +       
Sbjct: 126 KSGKPGKYARKIVLITDGNGFMNSEELDDIAKEINNNDIRLVVIGVD-FDDAEY-----G 179

Query: 280 LSSRDNALNTKLRKETQAQARRIDAQLNHGITVKPSELI-----PLEDYTQAYGVEQGTE 334
               D  L   ++ E +   R    + + GI    +E I     P+   T+ Y    G  
Sbjct: 180 FKEEDKDL---VKSENEKLLRSFTEKCSDGIFGTTAEAIEALATPVVKVTREYNTYTGPL 236

Query: 335 LYNLQQF--KSVAAPDVARI---KLMSTFDAKKFLQKIDDEYISN--PSLSLASTMMATK 387
           +    +   ++  + DVAR    K      AK ++ ++ DE I    P+    +++   +
Sbjct: 237 ILGDVKKYPETAMSIDVARYFRTKQAKPVSAKSYVDRVTDEPIDVDLPNTDDLTSVTQAR 296

Query: 388 YKEILEKSHRQSMQELNQDAISWGIKYKQ-IDPLRFDTEESFADSLRQRAGFVKKIKDDY 446
             ++ + +     +++ +DA+  G +Y   I P+    E        +    +  + +DY
Sbjct: 297 TYKVNDTTAPGGKKDVEKDALERGYEYGSTIVPISQSDESITKLQTIKDFSIMGFVPNDY 356

Query: 447 NLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNGLSA 506
                         +    +                  ++  +  + S    + +    A
Sbjct: 357 ---------ERYLNMGESCIT------------IAQKTNEKARMALSSLIHALHELDSCA 395

Query: 507 VVRLSSEFSDDAKNA--AMVILSGMKHQKDTETRYNTDHKSNKFDSLYDSYINTPLTKLE 564
           V R+  +   D      A +I  G++   D    +  D ++ +F  L   + ++     +
Sbjct: 396 VARIVKKDGSDPLIVLLAPLIEPGLEGLIDVPLPFAEDVRAYRFAPLDKVFNSSGGIMEK 455

Query: 565 QSTAGGNFNKDKEA 578
                 N  K   +
Sbjct: 456 HKNLPSNDLKAAMS 469


>gi|296505336|ref|YP_003667036.1| minor extracellular protease VpR [Bacillus thuringiensis BMB171]
 gi|296326388|gb|ADH09316.1| minor extracellular protease VpR [Bacillus thuringiensis BMB171]
          Length = 1407

 Score = 39.8 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 116/385 (30%), Gaps = 65/385 (16%)

Query: 336 YNLQQFKSVAAPDVARIKLM--------STFDAKKFL----QKIDDEY-ISNPSLSLAST 382
           Y   Q  S+A+P +A +  +        S FD K  L      + ++Y +          
Sbjct: 610 YERMQGTSMASPHIAGVAALILQEHPDYSPFDVKASLMNTANDLKEKYSVYEVGAGRVDA 669

Query: 383 MMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKI 442
             A    E   K    +   +N + I    +   I   +F                 + +
Sbjct: 670 YNAV-RTETSFKVLDTTQTVVNDEVIEVPEETGSIAFGKF------------YQKDGEAL 716

Query: 443 KDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDN 502
           +   N+  ++ NK E+ + +T++   PAS +++      N +  S  E +        + 
Sbjct: 717 EQKRNIKVTNHNKQEKKEFKTEISYTPASSTIN--DAVANGVKISAPETITLDAGKTGEI 774

Query: 503 GLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYNTDHKS----------------- 545
                V    +           I +    ++  +  ++                      
Sbjct: 775 EAKINVPAGVKQGRYEGYIH--ITNTKNKEETYQIPFSIRVSEPGIENAILSRKAISTDT 832

Query: 546 NKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQ 605
           +KF+   +SY++       +        KD +  K   LG +       L          
Sbjct: 833 SKFNPYGESYVHGAFQLNSELETLDLIVKDSKTNKA--LGFIGTLNTSGLKTDVYYYLDS 890

Query: 606 IVLGNTPVNINESMLMPPRGMSKTDFEDRLWYATKDTGEYDPYTIKYMNVG----SGKYM 661
              G      N      P G  K +  +         G+Y    + Y   G     G Y+
Sbjct: 891 FFNGKVYPFTN--DPAKPIGDEKINLPE---------GDYTIEFVGYDKAGKARVKGDYV 939

Query: 662 IIKNGNPKVDKEG-KTIIINVEDVN 685
           +I N  P+V   G K  I  + + N
Sbjct: 940 VIDNTPPEVKLTGLKPGIYELNEEN 964


>gi|229158492|ref|ZP_04286553.1| Peptidase Vpr; Serine peptidase; MEROPS family S08A [Bacillus
           cereus ATCC 4342]
 gi|228625011|gb|EEK81777.1| Peptidase Vpr; Serine peptidase; MEROPS family S08A [Bacillus
           cereus ATCC 4342]
          Length = 1407

 Score = 39.8 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 53/382 (13%), Positives = 115/382 (30%), Gaps = 59/382 (15%)

Query: 336 YNLQQFKSVAAPDVARIKLM--------STFDAKKFLQKIDDEYISNPSLSLASTMMATK 387
           Y   Q  S+A+P +A +  +        S FD K  L    D+         +   +   
Sbjct: 610 YERMQGTSMASPHIAGVAALILQEHPEYSPFDVKASLMNTADDLK----EKYSVYEVGAG 665

Query: 388 YKEILEKSH--------RQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFV 439
             +     H          +   +N + I    +   I   +F                 
Sbjct: 666 RVDAYNAVHTETSFKVLDTTKTVVNDEVIEVPEETGSIAFGKF------------YQKDG 713

Query: 440 KKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHI 499
           + ++   N+   + NK E+ + +T++   PAS S++      N +  S  E +       
Sbjct: 714 EALEQKRNIKVENHNKQEKKEFKTEISYTPASSSIN--DAIANGVKVSVPETITLDAGKS 771

Query: 500 EDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYNTDHKSNKFDSLYDSYINTP 559
           ++      V    +           I +    ++  +  ++        +          
Sbjct: 772 DEIEAKVNVPAGVKQGRYEGYIH--ITNTKNKEETYQIPFSIRVSEPGIED-----AVLS 824

Query: 560 LTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINESM 619
              +   T   N  ++      + L S  ++ +  +   + + A+  + G    +  ++ 
Sbjct: 825 RKSISTDTTKFNPYRESYVHGAFQLNSELETLDLIVKDSKTNKALGFI-GTLNTSGLKTD 883

Query: 620 L-----------MPPRGMSKTDFEDRLWYATKDTGEYDPYTIKYMNVG----SGKYMIIK 664
           +           + P                 + G+Y    + Y   G     G Y+II 
Sbjct: 884 VYYYLESFFNGKVYPFTNDPAKPIGDEKINLPE-GDYTIEFVGYDKAGKARVKGDYVIID 942

Query: 665 NGNPKVDKEG-KTIIINVEDVN 685
           N  P+V   G K  I  + + N
Sbjct: 943 NTPPEVKLTGLKPGIYELNEEN 964


>gi|229147445|ref|ZP_04275794.1| Peptidase Vpr; Serine peptidase; MEROPS family S08A [Bacillus
           cereus BDRD-ST24]
 gi|228636127|gb|EEK92608.1| Peptidase Vpr; Serine peptidase; MEROPS family S08A [Bacillus
           cereus BDRD-ST24]
          Length = 1407

 Score = 39.8 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 116/385 (30%), Gaps = 65/385 (16%)

Query: 336 YNLQQFKSVAAPDVARIKLM--------STFDAKKFL----QKIDDEY-ISNPSLSLAST 382
           Y   Q  S+A+P +A +  +        S FD K  L      + ++Y +          
Sbjct: 610 YERMQGTSMASPHIAGVAALILQEHPDYSPFDVKASLMNTANDLKEKYSVYEVGAGRVDA 669

Query: 383 MMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKI 442
             A    E   K    +   +N + I    +   I   +F                 + +
Sbjct: 670 YNAV-RTETSFKVLDTTQTVVNDEVIEVPEETGSIAFGKF------------YQKDGEAL 716

Query: 443 KDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDN 502
           +   N+  ++ NK E+ + +T++   PAS +++      N +  S  E +        + 
Sbjct: 717 EQKRNIKVTNHNKQEKKEFKTEISYTPASSTIN--DAVANGVKISAPETITLDAGKTGEI 774

Query: 503 GLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYNTDHKS----------------- 545
                V    +           I +    ++  +  ++                      
Sbjct: 775 EAKINVPAGVKQGRYEGYIH--ITNTKNKEETYQIPFSIRVSEPGIENAILSRKAISTDT 832

Query: 546 NKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQ 605
           +KF+   +SY++       +        KD +  K   LG +       L          
Sbjct: 833 SKFNPYGESYVHGAFQLNSELETLDLIVKDSKTNKA--LGFIGTLNTSGLKTDVYYYLDS 890

Query: 606 IVLGNTPVNINESMLMPPRGMSKTDFEDRLWYATKDTGEYDPYTIKYMNVG----SGKYM 661
              G      N      P G  K +  +         G+Y    + Y   G     G Y+
Sbjct: 891 FFNGKVYPFTN--DPAKPIGDEKINLPE---------GDYTIEFVGYDKAGKARVKGDYV 939

Query: 662 IIKNGNPKVDKEG-KTIIINVEDVN 685
           +I N  P+V   G K  I  + + N
Sbjct: 940 VIDNTPPEVKLTGLKPGIYELNEEN 964


>gi|160901818|ref|YP_001567399.1| flagellar basal body rod protein [Petrotoga mobilis SJ95]
 gi|160359462|gb|ABX31076.1| flagellar basal body rod protein [Petrotoga mobilis SJ95]
          Length = 240

 Score = 39.8 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 47/141 (33%), Gaps = 14/141 (9%)

Query: 553 DSYINTPL-TKLEQSTAGGNFNKDKEA--IKLYLLGSMKDS--GNYTLNRVRVSDAMQIV 607
           +S  N              N  K      I+ Y     K    GN   + V + + +  +
Sbjct: 19  NSISNNLANLNTVGYKKDFNLFKSVYEKEIRSYQNAQGKGEPIGNI-YSSVVLDEVIPNL 77

Query: 608 LGNTPVNINESMLMPPRGMSKTDFEDRLWYATKDTGEYDPYTIKYMNVGSGKYMIIKNGN 667
                V  +         +    F     +  +  G Y        ++    Y++ K+G+
Sbjct: 78  EQGPLVETSGK---LDFAIEGDGF-----FKIERNGNYFYTRNGEFSLSPENYLVTKSGD 129

Query: 668 PKVDKEGKTIIINVEDVNRDE 688
             +D+E   I++++++   DE
Sbjct: 130 YVLDEENNPILVDLDNFFVDE 150


>gi|77736177|ref|NP_001029787.1| tumor protein D54 [Bos taurus]
 gi|74354962|gb|AAI03374.1| Tumor protein D52-like 2 [Bos taurus]
 gi|296481163|gb|DAA23278.1| tumor protein D52-like 2 [Bos taurus]
          Length = 186

 Score = 39.8 bits (91), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 54/165 (32%), Gaps = 8/165 (4%)

Query: 453 FNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSS 512
            N   +  L   +   P   +V     A   L++++ E +R+  A +E+     +V L  
Sbjct: 10  LNSPNKGLLSDSMTDVPVDTAVAAQAPAVEGLTETEAEELRAELAKVEEE----IVTLRQ 65

Query: 513 EFSDDAKNAAMVILSGMKHQKDTETRYNTDHKSNKFD-SLYDSYINTPLTKLEQSTAGGN 571
             +   ++   +     K    T      +   +  D  + ++Y  T  T  +       
Sbjct: 66  VLAAKERHCGEL---KRKLGLSTLEGLKQNLSRSWHDMQVSNAYKKTQETLSQAGQKTSA 122

Query: 572 FNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNIN 616
                 +     LG M++S  +     RV      V+G      +
Sbjct: 123 ALSTMGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVGGRENGGD 167


>gi|296314927|ref|ZP_06864868.1| chaperone protein DnaK [Neisseria polysaccharea ATCC 43768]
 gi|296838116|gb|EFH22054.1| chaperone protein DnaK [Neisseria polysaccharea ATCC 43768]
          Length = 642

 Score = 39.4 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 52/159 (32%), Gaps = 12/159 (7%)

Query: 520 NAAMVILSGMKHQKDTETRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAI 579
            AA  ++      K+ +    +        +  D+++     +L          +  +  
Sbjct: 67  YAAKRLIGHKFEGKEVQRDIESMPFEIIKANNGDAWVKAQGKELSPPQISAEVLRKMKEA 126

Query: 580 KLYLLGSMKDSGNYTL-------NRVRVSDAMQIVLGNTPVNINE-SMLMPPRGMSKTDF 631
               LG        T+        R    DA +I   +    INE +      GM K D 
Sbjct: 127 AEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAFGMDKGDN 186

Query: 632 EDRLWYATKDT--GEYDPYTIKYMNV-GSGKYMIIKNGN 667
           +DR   A  D   G +D   I+  N+ G  ++ ++    
Sbjct: 187 KDR-KVAVYDLGGGTFDISIIEIANLDGDKQFEVLATNG 224


>gi|30022936|ref|NP_834567.1| minor extracellular protease VpR precursor [Bacillus cereus ATCC
           14579]
 gi|229130153|ref|ZP_04259114.1| Peptidase Vpr; Serine peptidase; MEROPS family S08A [Bacillus
           cereus BDRD-Cer4]
 gi|29898495|gb|AAP11768.1| Minor extracellular protease VPR precursor [Bacillus cereus ATCC
           14579]
 gi|228653368|gb|EEL09245.1| Peptidase Vpr; Serine peptidase; MEROPS family S08A [Bacillus
           cereus BDRD-Cer4]
          Length = 1407

 Score = 39.4 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 116/385 (30%), Gaps = 65/385 (16%)

Query: 336 YNLQQFKSVAAPDVARIKLM--------STFDAKKFL----QKIDDEY-ISNPSLSLAST 382
           Y   Q  S+A+P +A +  +        S FD K  L      + ++Y +          
Sbjct: 610 YERMQGTSMASPHIAGVAALILQEHPDYSPFDVKASLMNTANDLKEKYSVYEVGAGRVDA 669

Query: 383 MMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKI 442
             A    E   K    +   +N + I    +   I   +F                 + +
Sbjct: 670 YNAV-RTETSFKVLDTTQTVVNDEVIEVPEETGSIAFGKF------------YQKDGEAL 716

Query: 443 KDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDN 502
           +   N+  ++ NK E+ + +T++   PAS +++      N +  S  E +        + 
Sbjct: 717 EQKRNIKVTNHNKQEKKEFKTEISYTPASSTIN--DAVANGVKISAPETITLDAGKTGEI 774

Query: 503 GLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYNTDHKS----------------- 545
                V    +           I +    ++  +  ++                      
Sbjct: 775 KAKINVPAGVKQGRYEGYIH--ITNTKNKEETYQIPFSIRVSEPGIENAILSRKAISTDT 832

Query: 546 NKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQ 605
           +KF+   +SY++       +        KD +  K   LG +       L          
Sbjct: 833 SKFNPYGESYVHGAFQLNSELETLDLIVKDSKTNKA--LGFIGTLNTSGLKTDVYYYLDS 890

Query: 606 IVLGNTPVNINESMLMPPRGMSKTDFEDRLWYATKDTGEYDPYTIKYMNVG----SGKYM 661
              G      N      P G  K +  +         G+Y    + Y   G     G Y+
Sbjct: 891 FFNGKVYPFTN--DPAKPIGDEKINLPE---------GDYTIEFVGYDKAGKARVKGDYV 939

Query: 662 IIKNGNPKVDKEG-KTIIINVEDVN 685
           +I N  P+V   G K  I  + + N
Sbjct: 940 VIDNTPPEVKLTGLKPGIYELNEEN 964


>gi|319954804|ref|YP_004166071.1| type i restriction-modification system, m subunit [Cellulophaga
           algicola DSM 14237]
 gi|319423464|gb|ADV50573.1| type I restriction-modification system, M subunit [Cellulophaga
           algicola DSM 14237]
          Length = 905

 Score = 39.4 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 63/241 (26%), Gaps = 31/241 (12%)

Query: 405 QDAISWGIKYKQIDPLR-----FDTEE-SFADSLRQRAGFVKKIKDDYNLTTSHFNKTEE 458
            D    G   + ID L      F+     F+   + +A     + D Y     HF     
Sbjct: 98  NDPTKLGSDKEMIDTLDALIGIFENPALDFS---KNKADGDDILGDAYEFLMRHFATQSG 154

Query: 459 NQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVR------SSFAHIEDNGLSAVVRLSS 512
                       S ++  I G  N  ++SD           S    +     S V     
Sbjct: 155 KSKGQFYTPSEVSRTMASIIGINNVDTNSDITVYDPTCGSGSLLLKVGTEAKSKVTLYGQ 214

Query: 513 EFSDDAKNAAMVILSGMKHQKDTETRYNTDHKSNKFD-------SLYDSYINTPLTKLEQ 565
           E        A + +    +      + NT  K    D         +D  +  P    ++
Sbjct: 215 EKDATTAGLARMNMILHDNPTAEIKQGNTLSKPLFEDPKLEANLKTFDFVVANPPFSDKR 274

Query: 566 STAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINESMLMPPRG 625
            + G     DK             +G+Y      V                +  ++ P G
Sbjct: 275 WSNGLTLPDDKYNRFADYGIPPSKNGDYAFLLHIVRS---------LKRNGKGAIILPHG 325

Query: 626 M 626
           +
Sbjct: 326 V 326


>gi|308063751|gb|ADO05638.1| vacuolating cytotoxin VacA-like protein [Helicobacter pylori
           Sat464]
          Length = 2391

 Score = 39.4 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 37/326 (11%), Positives = 84/326 (25%), Gaps = 19/326 (5%)

Query: 337 NLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSH 396
                  + A   A  +   +           D  I++      +    T  K+   ++ 
Sbjct: 434 TQFLGDDLQAKAKATYQQDLSNSQTALNNATSDNKIASSDTGYTNNQNTTIKKD--AQNL 491

Query: 397 RQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKT 456
             + Q++ QD  +      ++  L   T      +  Q     +            FN  
Sbjct: 492 ENTSQQIAQDEQTLKGDLDKLQQLANATTGFNEQAFNQAQSTEQHDLQTLQNEEKTFNSE 551

Query: 457 EENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSD 516
           +E  L   + +   +          +T  ++    V     ++    + + V      + 
Sbjct: 552 QEG-LEQAIAQAKHTSPTPSPTPTKHTAQNTPPNKVSPPTQNLPTTDVWSGVYWLQNQTY 610

Query: 517 DAKNAAMVI--LSGMKHQKDTETRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNK 574
             +    +   LSG   Q            +   + L  S+                   
Sbjct: 611 SKQGVYYIDPNLSGQSGQ------SGNTLSTYTANLLGRSFGVNIQNGTLIIGNNTESVN 664

Query: 575 DKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDFEDR 634
           D   I +   G    +G +    + +++      G      +          S     D 
Sbjct: 665 DNGLIWIGHGGFGYITGTFNAANIYLTN--NFKTGEGVSGSDGGGANITFKASDNITMDG 722

Query: 635 LWYATKDTGEYDPYTIKYMNVGSGKY 660
           L Y   +T        K +  G+ ++
Sbjct: 723 LNYNDAET------VTKMIQTGASQH 742


>gi|229048585|ref|ZP_04194145.1| Peptidase Vpr; Serine peptidase; MEROPS family S08A [Bacillus
           cereus AH676]
 gi|229112338|ref|ZP_04241877.1| Peptidase Vpr; Serine peptidase; MEROPS family S08A [Bacillus
           cereus Rock1-15]
 gi|228671178|gb|EEL26483.1| Peptidase Vpr; Serine peptidase; MEROPS family S08A [Bacillus
           cereus Rock1-15]
 gi|228722787|gb|EEL74172.1| Peptidase Vpr; Serine peptidase; MEROPS family S08A [Bacillus
           cereus AH676]
          Length = 1407

 Score = 39.4 bits (90), Expect = 2.4,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 116/385 (30%), Gaps = 65/385 (16%)

Query: 336 YNLQQFKSVAAPDVARIKLM--------STFDAKKFL----QKIDDEY-ISNPSLSLAST 382
           Y   Q  S+A+P +A +  +        S FD K  L      + ++Y +          
Sbjct: 610 YERMQGTSMASPHIAGVAALILQEHPDYSPFDVKASLMNTANDLKEKYSVYEVGAGRVDA 669

Query: 383 MMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKI 442
             A    E   K    +   +N + I    +   I   +F                 + +
Sbjct: 670 YNAV-RTETSFKVLDTTQTVVNDEVIEVPEETGSIAFGKF------------YQKDGEAL 716

Query: 443 KDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDN 502
           +   N+  ++ NK E+ + +T++   PAS +++      N +  S  E +        + 
Sbjct: 717 EQKRNIKVTNHNKQEKKEFKTEISYTPASSTIN--DAVANGVKISAPETITLDAGKTGEI 774

Query: 503 GLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYNTDHKS----------------- 545
                V    +           I +    ++  +  ++                      
Sbjct: 775 EAKINVPAGVKQGRYEGYIH--ITNTKNKEETYQIPFSIRVSEPGIENAILSRKAISTDT 832

Query: 546 NKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQ 605
           +KF+   +SY++       +        KD +  K   LG +       L          
Sbjct: 833 SKFNPYGESYVHGAFQLNSELETLDLIVKDSKTNKA--LGFIGTLNTSGLKTDLYYYLDS 890

Query: 606 IVLGNTPVNINESMLMPPRGMSKTDFEDRLWYATKDTGEYDPYTIKYMNVG----SGKYM 661
              G      N      P G  K +  +         G+Y    + Y   G     G Y+
Sbjct: 891 FFNGKVYPFTN--DPAKPIGDEKINLPE---------GDYTIEFVGYDKAGKARVKGDYV 939

Query: 662 IIKNGNPKVDKEG-KTIIINVEDVN 685
           +I N  P+V   G K  I  + + N
Sbjct: 940 VIDNTPPEVKLTGLKPGIYELNEEN 964


>gi|224499224|ref|ZP_03667573.1| hypothetical protein LmonF1_05837 [Listeria monocytogenes Finland
           1988]
          Length = 1023

 Score = 39.0 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 58/313 (18%), Positives = 111/313 (35%), Gaps = 35/313 (11%)

Query: 254 EDVSKAIGLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKE---TQAQARRIDAQLNHGI 310
           E V+K + +AGWD+    + + L E L+ +     T  R+E    Q QA  +   L+ G 
Sbjct: 456 ELVNKRVKMAGWDKQKQVEEQTLAELLTEKTEIETTIKREELKRQQEQAATLAIHLHDGD 515

Query: 311 ------TVKPSELIPLEDYTQAYGVE-QGTELYNLQQFKSVAAPDVARIK-LMSTFDAKK 362
                 +V   EL    +      +E    +L   QQ    A   +++ +  ++ +    
Sbjct: 516 ACPVCGSVSHPELAKFGESANLETLEVASAKLNEKQQAIHSAEKSISQFEWQLNEWAEIA 575

Query: 363 FLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRF 422
            +     E     + ++      T   E L+       +   ++ I   ++  +I+  + 
Sbjct: 576 DVNL--AEVEQTLAENIQQAKNLTAQIETLQA------KVAQKETIQATLETLKINQNKA 627

Query: 423 DTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYN 482
           + E++        A  V+ +     L     N  E++       K       + +  +  
Sbjct: 628 EIEKN------NIAVQVENLHQQVQLAAGKLNYLEQSIPADLRDKAVFEHKKNELNTSIQ 681

Query: 483 TLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYNTD 542
           T      E V ++F   E         L+S        A   ILS  +  ++    + T 
Sbjct: 682 T-HIEQAERVDAAFRQAEKATTQLESTLAS--------AQKAILSAQEALQEQREIFKTA 732

Query: 543 HKSNKFDSLYDSY 555
            K N F S YD+Y
Sbjct: 733 MKQNDFSS-YDAY 744


>gi|321454600|gb|EFX65765.1| hypothetical protein DAPPUDRAFT_303533 [Daphnia pulex]
          Length = 931

 Score = 39.0 bits (89), Expect = 2.9,   Method: Composition-based stats.
 Identities = 67/299 (22%), Positives = 109/299 (36%), Gaps = 38/299 (12%)

Query: 186 IDLRLKQKLLSEAKEKLNTNQIIGAHARDPRVFENFMRAFYKKGHPPKDSTSLSDVSDSA 245
           ++ +LKQ L  E K    T +I   H  + + FE  +R  YK+          SD S + 
Sbjct: 492 LERKLKQNLTGEKKL---TKEINARHLLERKNFETQVRREYKQTKERWKQELSSDESTTK 548

Query: 246 RER--SLEVVEDVSKAIGLAGWDRLDDTKRRRL-LEHLSSRDNAL---NTKLRKETQAQA 299
           R+R  SL+  +D  KAI     +RL  +++  L LE    R   L   +   R+    + 
Sbjct: 549 RQRDASLQNYKDSLKAIEAREEERLTKSQKDYLELEVRRLRRAKLLSYHRLERELLCEEL 608

Query: 300 RRIDAQLN--HGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMST 357
            R  AQL   H + ++  EL    +Y Q   V     L   Q  +               
Sbjct: 609 NRRQAQLETAHAMLLRHHELTQELEYRQQRAVH---MLREEQLRRQ---------HQTEL 656

Query: 358 FDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQI 417
            +  ++ Q+ + E     ++ L     + K KEIL +      Q      I         
Sbjct: 657 SNQHEYTQRAERELRKKHAVELKQQPKSLKQKEILIR-----KQFRETVKIQTRQYKALK 711

Query: 418 DPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDL 476
             +   T         Q+   +KK+KDD     +   +  E  +   L K    +S+ L
Sbjct: 712 AQVLASTPRD------QQKSVIKKLKDDQRRKLALLGEQYEQSIAEMLQK----QSIRL 760


>gi|302505046|ref|XP_003014744.1| hypothetical protein ARB_07306 [Arthroderma benhamiae CBS 112371]
 gi|291178050|gb|EFE33841.1| hypothetical protein ARB_07306 [Arthroderma benhamiae CBS 112371]
          Length = 670

 Score = 39.0 bits (89), Expect = 3.0,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 41/121 (33%), Gaps = 10/121 (8%)

Query: 418 DPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLI 477
             + F   E+F   +   AG +K    D       F     +       K    +  D +
Sbjct: 533 SQVDFTNPENFYHDVNSVAGLLKLFFRDL--PDPLFTNERYSAFIDAARKDDDIQRRDAL 590

Query: 478 RGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAM---VILSGMKHQKD 534
               N+L D +   +R+   H+       V   SSE   +A N A+   + L G    ++
Sbjct: 591 HALINSLPDPNYATLRALILHLNH-----VQERSSENRMNAGNIAISFGLTLMGTNAGRN 645

Query: 535 T 535
            
Sbjct: 646 I 646


>gi|221506845|gb|EEE32462.1| conserved hypothetical protein [Toxoplasma gondii VEG]
          Length = 1141

 Score = 39.0 bits (89), Expect = 3.1,   Method: Composition-based stats.
 Identities = 76/468 (16%), Positives = 142/468 (30%), Gaps = 77/468 (16%)

Query: 191 KQKLLSEAKEKLNTNQIIGAHARDPRVFENFMRAFYKKGHPPKDS--TSLSDVSDSARE- 247
           KQ+LL   +E+L    +       P V +   R         KDS     +++  + RE 
Sbjct: 271 KQELLKFKEEQLPLRNL-------PEVLDELGRRIQANASTQKDSQLAFQAELCQNQREY 323

Query: 248 ----RSLEVVEDVSKAIGLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQARRID 303
                 LE +E+ S+A      + L      RLLE     ++ L T+  +ET        
Sbjct: 324 RDLRDRLENMEEQSRAHIKTNHETL------RLLE-----EHKLATQQLRET-------- 364

Query: 304 AQLNHGITVKPSELIPLEDY---TQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDA 360
               H   ++  EL   +++      +   Q  E+    Q    A  ++ R  LMS    
Sbjct: 365 ----HEELLRAQELRLRDEFQLQLAEFSKNQSQEVSTQMQDLRKALDELRRETLMS---Q 417

Query: 361 KKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPL 420
           +K  +    + +   +    S      +KE+     +Q      QD+++     ++    
Sbjct: 418 QKASEPERLDLMREAAEKRCSEGEQQLWKELEVIKKQQLELLRQQDSLAHQKSQQEKAER 477

Query: 421 RFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVD----- 475
                E     +  R       +  Y    +  + T  +       + P   S       
Sbjct: 478 VEKKLEDIRSFVSDREKDA---QKHYLDLMAALSCTASSSPSNGHFRAPLYSSSQKEVAL 534

Query: 476 --------LIRGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSS----EFSDDAKNAAM 523
                        +   + S  E    S + +  NG S  V  S       +  A+  A 
Sbjct: 535 HAALLLRCTFDAIHAAATASFSEESSCSDSQVPRNGTSVSVEASDRQTVAVARSAEEGAE 594

Query: 524 VILSGMKHQKDTETRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYL 583
            I        DT    +TD  +N+     ++++         S       +         
Sbjct: 595 DIPLKRSDSTDTSAGQSTDRLANRMTPASETFLAAGANAALGSRVDSPRGEA-------- 646

Query: 584 LGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDF 631
                 S N          A++     +      S ++ P G  ++ F
Sbjct: 647 ------SDNSAALGQSWKAAVRTSQAASSGVGGTSGVLSPGGELESAF 688


>gi|237831383|ref|XP_002364989.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
 gi|211962653|gb|EEA97848.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
          Length = 1141

 Score = 39.0 bits (89), Expect = 3.1,   Method: Composition-based stats.
 Identities = 76/468 (16%), Positives = 142/468 (30%), Gaps = 77/468 (16%)

Query: 191 KQKLLSEAKEKLNTNQIIGAHARDPRVFENFMRAFYKKGHPPKDS--TSLSDVSDSARE- 247
           KQ+LL   +E+L    +       P V +   R         KDS     +++  + RE 
Sbjct: 271 KQELLKFKEEQLPLRNL-------PEVLDELGRRIQANASTQKDSQLAFQAELCQNQREY 323

Query: 248 ----RSLEVVEDVSKAIGLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQARRID 303
                 LE +E+ S+A      + L      RLLE     ++ L T+  +ET        
Sbjct: 324 RDLRDRLENMEEQSRAHIKTNHETL------RLLE-----EHKLATQQLRET-------- 364

Query: 304 AQLNHGITVKPSELIPLEDY---TQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDA 360
               H   ++  EL   +++      +   Q  E+    Q    A  ++ R  LMS    
Sbjct: 365 ----HEELLRAQELRLRDEFQLQLAEFSKNQSQEVSTQMQDLRKALDELRRETLMS---Q 417

Query: 361 KKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPL 420
           +K  +    + +   +    S      +KE+     +Q      QD+++     ++    
Sbjct: 418 QKASEPERLDLMREAAEKRCSEGEQQLWKELEVIKKQQLELLRQQDSLAHQKSQQEKAER 477

Query: 421 RFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVD----- 475
                E     +  R       +  Y    +  + T  +       + P   S       
Sbjct: 478 VEKKLEDIRSFVSDREKDA---QKHYLDLMAALSCTASSSPSNGHFRAPLYSSSQKEVAL 534

Query: 476 --------LIRGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSS----EFSDDAKNAAM 523
                        +   + S  E    S + +  NG S  V  S       +  A+  A 
Sbjct: 535 HAALLLRCTFDAIHAAATASFSEESSCSDSQVPRNGTSVSVEASDRQTVAVARSAEEGAE 594

Query: 524 VILSGMKHQKDTETRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYL 583
            I        DT    +TD  +N+     ++++         S       +         
Sbjct: 595 DIPLKRSDSTDTSAGQSTDRLANRMTPASETFLAAGANAALGSRVDSPRGEA-------- 646

Query: 584 LGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDF 631
                 S N          A++     +      S ++ P G  ++ F
Sbjct: 647 ------SDNSAALGQSWKAAVRTSQAASSGVGGTSGVLSPGGELESAF 688


>gi|260805003|ref|XP_002597377.1| hypothetical protein BRAFLDRAFT_118210 [Branchiostoma floridae]
 gi|229282640|gb|EEN53389.1| hypothetical protein BRAFLDRAFT_118210 [Branchiostoma floridae]
          Length = 870

 Score = 38.6 bits (88), Expect = 3.2,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 122/349 (34%), Gaps = 25/349 (7%)

Query: 359 DAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHRQSM--QELNQD-AISWGIKYK 415
             ++ L++ + E  S     LA      +  E + + + + +  +  N D  +     + 
Sbjct: 341 ALQEQLKQKEREKQSLLQERLALKTEVVEKLEKVAELNEKVLDLEVENNDMHVKLSASHM 400

Query: 416 QIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVD 475
           Q++ ++  T  SF    R+R G ++             ++ E +     +VK P + + +
Sbjct: 401 QMERMKTMTPSSFG---RRRHGEIES---------GFDSQRESSAESMTVVKAPRTPTPE 448

Query: 476 LIRGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDT 535
            +  A  T+ +   + +  S   ++ +  S  V +   FS D ++     +S +    + 
Sbjct: 449 PLPPAGPTVEEETLKALNHSALELDKSYRSLKVIVKDGFS-DLQDLTKKAISALGQISEM 507

Query: 536 ETRYNTDHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTL 595
           ++    + +  +     ++          Q     N  ++            +D      
Sbjct: 508 DSSSGNEVEELRVLYRKEAL---------QRKLLYNQLQELRGNIRVFCRCRRDDRVGGY 558

Query: 596 NRVRVSDAMQIVLGNTPVNINESMLMPPRGMSKTDFEDRLWYATKDTGEYDPYTIKYMNV 655
            +    + + +  G +    +   +  P    +  FED L         Y+   + Y   
Sbjct: 559 MQFPNDEDIVVPTGGSKKTFSFDKVFSPASTQEQVFEDTLPIVQSCVDGYNVCILAYGQT 618

Query: 656 GSGKYMIIKNGNPKVDKEGKTIIINVEDVNRDERMESTIRHYEHQIFNE 704
           GSGK   +           +TI   +   N  E ++ T++    +++NE
Sbjct: 619 GSGKTFTMMGPPDYPGVNIRTIKELLRICNDKETVDYTLKISMVEVYNE 667


>gi|302664420|ref|XP_003023840.1| hypothetical protein TRV_02037 [Trichophyton verrucosum HKI 0517]
 gi|291187858|gb|EFE43222.1| hypothetical protein TRV_02037 [Trichophyton verrucosum HKI 0517]
          Length = 669

 Score = 38.6 bits (88), Expect = 3.4,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 41/121 (33%), Gaps = 10/121 (8%)

Query: 418 DPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLI 477
             + F   E+F   +   AG +K    D       F     +       K    +  D +
Sbjct: 532 SQVDFTNPENFYHDVNSVAGLLKLFFRDL--PDPLFTNERYSAFIDAARKDDDIQRRDAL 589

Query: 478 RGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAM---VILSGMKHQKD 534
               N+L D +   +R+   H+       V   SSE   +A N A+   + L G    ++
Sbjct: 590 HALINSLPDPNYATLRALILHLNH-----VQERSSENRMNAGNIAISFGLTLMGTNAGRN 644

Query: 535 T 535
            
Sbjct: 645 I 645


>gi|149391787|emb|CAO00730.1| putative cellulosomal scaffoldin protein precursor [Ruminococcus
            flavefaciens]
          Length = 1503

 Score = 38.6 bits (88), Expect = 3.7,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 46/143 (32%), Gaps = 9/143 (6%)

Query: 474  VDLIRGAYNTLSDSDKEGVR--SSFAHIEDN-GLSAVVRLSSEFSDDAKNAAMVILSGMK 530
            + L+      L+     GV+  ++  ++ D+   SAV+R  +  S + ++   VIL    
Sbjct: 1363 MQLLDKDGKPLTVPAYIGVKGDATLDNMVDSVDASAVLRYYASISTNDRDVYDVILQSTV 1422

Query: 531  HQKDTETRYN--TDHKSNKFDSLYDSYIN-TPLTKLEQSTAGGNFNKDKEAIKLYLLGSM 587
                 ET  +   +  +   D   + +      TK        N   D   I  Y     
Sbjct: 1423 AGLKVETPKDELDELAAFLADVNTNEWSADNWKTKKNGRRIDSN---DASKILAYYARRS 1479

Query: 588  KDSGNYTLNRVRVSDAMQIVLGN 610
                +   N    ++ +      
Sbjct: 1480 SSDYDNVSNYDIWNEVLGTARFG 1502


>gi|322816009|gb|EFZ24470.1| hypothetical protein TCSYLVIO_9383 [Trypanosoma cruzi]
          Length = 1041

 Score = 38.6 bits (88), Expect = 3.8,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 103/305 (33%), Gaps = 40/305 (13%)

Query: 245 ARERSLEVVEDVSKAIGLAGWDRLDDTKRRRLLEHLSSRDNALN---------TKLRKET 295
           A ER LE ++++   +  AG +R    K+RR       R++ L           + R++T
Sbjct: 175 AEERRLEKLQEMKSKLVAAG-ERSFQAKQRRTQAEERLRNDTLERHENGARRVEEAREQT 233

Query: 296 QAQARR-----IDAQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKS----VAA 346
           + +ARR      + +LN+ +  +   L+ L+         Q  +   LQ+          
Sbjct: 234 KERARRGHSRVEEVRLNYELRNQTKALL-LDRKMSEVEHNQEQKREELQRHAQERNEAML 292

Query: 347 PDVARIKLMSTFDAKKFL----------------QKIDDEYISNPSLSLASTMMATKYKE 390
               R + +S    ++                  +K++ +     +      +   +   
Sbjct: 293 AVAERRRNLSQERIERQQQREQQRRENLRRHEEQKKLEKDLKEQRAEEWEKKVQQRQRDA 352

Query: 391 ILEKSHR-QSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLT 449
             E   R + ++E  Q ++    + +++   + + +E      RQR       K      
Sbjct: 353 CAEAEARGRKVEERIQQSVQLREEKREMLRQKLEKQEQKIKEARQRKEREADTKPTIKEL 412

Query: 450 TSHFNKTEENQLRTQLVK---RPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNGLSA 506
               +  EE QL  +L K     A +    +       + S K+  RS    I     S 
Sbjct: 413 MPFISPQEEEQLAQKLAKVVAVTARQGKSYMEIYQKESTMSAKDLNRSKLRSIISRLGSN 472

Query: 507 VVRLS 511
               S
Sbjct: 473 TSSAS 477


>gi|326471562|gb|EGD95571.1| rho GTPase activator [Trichophyton tonsurans CBS 112818]
          Length = 651

 Score = 38.6 bits (88), Expect = 3.9,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 41/121 (33%), Gaps = 10/121 (8%)

Query: 418 DPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLI 477
             + F   E+F   +   AG +K    D       F     +       K    +  D +
Sbjct: 514 SQVDFTNPENFYHDVNSVAGLLKLFFRDL--PDPLFTNERYSAFIDAARKDDDIQRRDAL 571

Query: 478 RGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAM---VILSGMKHQKD 534
               N+L D +   +R+   H+       V   SSE   +A N A+   + L G    ++
Sbjct: 572 HALINSLPDPNYATLRALILHLNH-----VQERSSENRMNAGNIAISFGLTLMGTNAGRN 626

Query: 535 T 535
            
Sbjct: 627 I 627


>gi|253686481|ref|YP_003015671.1| cellulose synthase operon C domain protein [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251753059|gb|ACT11135.1| cellulose synthase operon C domain protein [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 1164

 Score = 38.6 bits (88), Expect = 3.9,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 83/245 (33%), Gaps = 32/245 (13%)

Query: 266 DRLDDTKRRRLLEH------LSSRDNAL---NTKLRKETQAQARRIDAQLNHGITVKPSE 316
           +RL+  K   L++       ++  DNAL   N  L ++   QAR++D             
Sbjct: 339 NRLNSGKWEGLIQSTQYWTTIAEGDNALKANNLSLARQKYQQARQMD-------NTNAYA 391

Query: 317 LIPLEDYTQAYGVEQGTELYNLQQFKSVAAPD------VARIKLMSTFDAKKFLQKIDDE 370
           LI L D   A   +   +    Q        D      V   +  S   A  +L  +   
Sbjct: 392 LIGLGDVAVASKNDAAAQPLYQQALHLEPGNDNALRGLVGIYQRQSPEKALAYLNSLPRS 451

Query: 371 YISNPSLSLAS------TMMATKYKEI--LEKSHRQSMQELNQDAISWGIKYKQIDPLRF 422
             +    +LA+         A +  E     ++  +  Q   QD     + Y     LR 
Sbjct: 452 QQNTMRETLAALQLNILKQQADQLSEQQQWTQAEEKYRQASQQDPNDIWLAYHYAQTLRQ 511

Query: 423 DTEESFADSLRQRAGFVK--KIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGA 480
             +   ADS+ QRA  V     + +Y  +    +   + Q    L   P ++  D +R  
Sbjct: 512 LGQTQQADSVVQRATAVPPTSAEKNYVYSLYLSSTNRDEQALAHLNTLPTAQWSDDMREL 571

Query: 481 YNTLS 485
              L+
Sbjct: 572 SQRLT 576


>gi|326481866|gb|EGE05876.1| rho GTPase activator [Trichophyton equinum CBS 127.97]
          Length = 651

 Score = 38.6 bits (88), Expect = 4.0,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 41/121 (33%), Gaps = 10/121 (8%)

Query: 418 DPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLI 477
             + F   E+F   +   AG +K    D       F     +       K    +  D +
Sbjct: 514 SQVDFTNPENFYHDVNSVAGLLKLFFRDL--PDPLFTNERYSAFIDAARKDDDIQRRDAL 571

Query: 478 RGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAM---VILSGMKHQKD 534
               N+L D +   +R+   H+       V   SSE   +A N A+   + L G    ++
Sbjct: 572 HALINSLPDPNYATLRALILHLNH-----VQERSSENRMNAGNIAISFGLTLMGTNAGRN 626

Query: 535 T 535
            
Sbjct: 627 I 627


>gi|327306031|ref|XP_003237707.1| rho GTPase activator [Trichophyton rubrum CBS 118892]
 gi|326460705|gb|EGD86158.1| rho GTPase activator [Trichophyton rubrum CBS 118892]
          Length = 651

 Score = 38.6 bits (88), Expect = 4.0,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 41/121 (33%), Gaps = 10/121 (8%)

Query: 418 DPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLI 477
             + F   E+F   +   AG +K    D       F     +       K    +  D +
Sbjct: 514 SQVDFTNPENFYHDVNSVAGLLKLFFRDL--PDPLFTNERYSAFIDAARKDDDIQRRDAL 571

Query: 478 RGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAM---VILSGMKHQKD 534
               N+L D +   +R+   H+       V   SSE   +A N A+   + L G    ++
Sbjct: 572 HALINSLPDPNYATLRALILHLNH-----VQERSSENRMNAGNIAISFGLTLMGTNAGRN 626

Query: 535 T 535
            
Sbjct: 627 I 627


>gi|331269450|ref|YP_004395942.1| DNA repair protein RecN [Clostridium botulinum BKT015925]
 gi|329126000|gb|AEB75945.1| DNA repair protein RecN [Clostridium botulinum BKT015925]
          Length = 564

 Score = 38.6 bits (88), Expect = 4.2,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 11/135 (8%)

Query: 571 NFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPV------NINESMLMPPR 624
           NF   +E    +  G    +G     +  + DA+  VLG            N + +    
Sbjct: 9   NFALIEELTINFEKGFNVLTGETGAGKSILIDAINYVLGGKFNKGLIRTGENRTFVEAIF 68

Query: 625 GMSKTDFEDRLWYATKDTGEYDPYTIKYMNVGSGKYMIIKNGNPKVDKEGK---TIIINV 681
            +  T   + L +   D    D   I      SGK ++  NG   +  + +   +I+IN+
Sbjct: 69  DIENTTIANVLKHM--DISCEDLLIISRETFKSGKSVVKANGKSLLIADIRKISSILINI 126

Query: 682 EDVNRDERMESTIRH 696
              + ++ + ++ +H
Sbjct: 127 HGQHDNQELLNSAKH 141


>gi|83745917|ref|ZP_00942974.1| Peptidyl-prolyl cis-trans isomerase [Ralstonia solanacearum UW551]
 gi|207743054|ref|YP_002259446.1| peptidyl-prolyl cis-trans isomerase protein [Ralstonia solanacearum
           IPO1609]
 gi|83727607|gb|EAP74728.1| Peptidyl-prolyl cis-trans isomerase [Ralstonia solanacearum UW551]
 gi|206594451|emb|CAQ61378.1| peptidyl-prolyl cis-trans isomerase protein [Ralstonia solanacearum
           IPO1609]
          Length = 648

 Score = 38.6 bits (88), Expect = 4.2,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 83/267 (31%), Gaps = 39/267 (14%)

Query: 266 DRLDDTKRRRLLEHLSSRDN--ALNTKLRKETQ-----AQARRIDAQLNHGITVKPSELI 318
           D LD   ++R++ + +SR N    +TK+R+  +     AQ R+ D + +    +K     
Sbjct: 87  DVLDGIIQQRMMVNEASRTNLSVADTKVRETIEQIPAVAQLRKPDGKFDTDAYIK----- 141

Query: 319 PLEDYTQAYGV--EQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPS 376
                  A G+  EQ       +         +     +      + ++  D +      
Sbjct: 142 ----LLAAQGMTPEQFDARLRSELVLQQIPQSIVSSAFVPKSLVDRLIEARDQQREVQAL 197

Query: 377 L----SLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSL 432
           L      AS +      +   +++  + Q+          +Y          +       
Sbjct: 198 LLKPADYASKVAVD---DKAIQAYYDAHQQEFAVPEQVKAEYVVFSGEDMMKQIPVTPE- 253

Query: 433 RQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGV 492
                   ++K+ Y+   + F   E+ +    L+K P +        A    +    E V
Sbjct: 254 --------QLKEYYDQNAARFKTEEQRRAAHILIKLPDNAK-----PADKDAAKKRAEEV 300

Query: 493 RSSFAHIEDNGLSAVVRLSSEFSDDAK 519
            +       N      + S +    A+
Sbjct: 301 LAEVRKTPGNFAELAKKYSEDPGSAAQ 327


>gi|312212433|emb|CBX92516.1| predicted protein [Leptosphaeria maculans]
          Length = 308

 Score = 38.2 bits (87), Expect = 4.3,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 75/254 (29%), Gaps = 42/254 (16%)

Query: 355 MSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEILEKSHR-------QSMQELNQDA 407
           + T D   + +   +  IS      AS        E LE            + Q      
Sbjct: 20  LPTSDHSYYAEVAREHRISLNPPKRASHTSRKVMHEHLEPITTPKSTPYYTANQLFQIAP 79

Query: 408 ISWGIKYKQIDPLRFD----TEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRT 463
              G+  + I P+  +    T  S A S  +R          Y +     ++  +  +  
Sbjct: 80  ---GMTLEDISPVSSEQSPLTPSSIATSNTRRQSSF-----HYGIPPLTRHQMPQPAISQ 131

Query: 464 QLVKRPASESV-------------DLIRGAYNTLSDSDKEGVRSSFAHIED-----NGLS 505
            +   PAS+                 +R +++T S +      S  A +       +  +
Sbjct: 132 DVQVSPASDHFQNYPYRMEPESHQRTMRTSFHTASSTAGFVYGSDTAGLPQTCFLSSNGA 191

Query: 506 AVVRLSSEFSDDAKNA---AMVILSGMKHQKDTETRYNTDHKSNKFDSLYDSYINTPLTK 562
                S    D        +  I  G      T   Y  +     F+  Y+SY N  + +
Sbjct: 192 P--EYSRPSHDLPPYIYPPSPHIQGGSNLCDKTARYYEYESSPRTFNHAYNSYYNVNVGQ 249

Query: 563 LEQSTAGGNFNKDK 576
              S +    +++K
Sbjct: 250 WTSSASAYPLDENK 263


>gi|71401106|ref|XP_803264.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70866081|gb|EAN81818.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 1041

 Score = 38.2 bits (87), Expect = 4.5,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 103/305 (33%), Gaps = 40/305 (13%)

Query: 245 ARERSLEVVEDVSKAIGLAGWDRLDDTKRRRLLEHLSSRDNALN---------TKLRKET 295
           A ER LE ++++   +  AG +R    K+RR       R++ L           + R++T
Sbjct: 175 AEERRLEKLQEMKSKLVAAG-ERSFQAKQRRTQAEERLRNDTLERHENGARRVEEAREQT 233

Query: 296 QAQARR-----IDAQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQ----FKSVAA 346
           + +ARR      + +LN+ +  +   L+ L+         Q  +   LQ+          
Sbjct: 234 KERARRGHSRVEEVRLNYELRNQTKALL-LDRKMSEVEHNQEQKREELQRHAQERNEAML 292

Query: 347 PDVARIKLMSTFDAKKFL----------------QKIDDEYISNPSLSLASTMMATKYKE 390
               R + +S    ++                  +K++ +     +      +   +   
Sbjct: 293 AVAERRRNLSQERIERQQQREQQRRENLRRHEEQKKLEKDLKEQRAEEWEKKVQQRQRDA 352

Query: 391 ILEKSHR-QSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLT 449
             E   R + ++E  Q ++    + +++   + + +E      RQR       K      
Sbjct: 353 CAEAEARGRKVEERIQQSVHLREEKREMLRQKLEKQEQKIKEARQRKEREADTKPTIKEL 412

Query: 450 TSHFNKTEENQLRTQLVK---RPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNGLSA 506
               +  EE QL  +L K     A +    +       + S K+  RS    I     S 
Sbjct: 413 MPFISSQEEEQLAQKLAKVVAVTARQGKSYMEIYQKESTMSAKDLNRSKLRSIISRLGSN 472

Query: 507 VVRLS 511
               S
Sbjct: 473 TSSAS 477


>gi|313205668|ref|YP_004044845.1| tetratricopeptide tpr_1 repeat-containing protein [Riemerella
           anatipestifer DSM 15868]
 gi|312444984|gb|ADQ81339.1| Tetratricopeptide TPR_1 repeat-containing protein [Riemerella
           anatipestifer DSM 15868]
 gi|315022600|gb|EFT35626.1| TPR-domain containing protein [Riemerella anatipestifer RA-YM]
 gi|325336890|gb|ADZ13164.1| Tetratricopeptide TPR-1 [Riemerella anatipestifer RA-GD]
          Length = 986

 Score = 38.2 bits (87), Expect = 4.6,   Method: Composition-based stats.
 Identities = 45/298 (15%), Positives = 90/298 (30%), Gaps = 29/298 (9%)

Query: 320 LEDYTQAYGVEQGTELYNLQQFKSVA---APDVARIKLMSTFDAKKFLQKIDDEYISNPS 376
           L D    Y   + ++ Y L Q            A+I  M    A+    +  D+ +    
Sbjct: 556 LNDAIAIYNNAETSDEYTLFQKAMALGFKGDTEAKISEMKKLVAQYPNSEYKDDALYEIG 615

Query: 377 LSLA---STMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLR 433
            + A      ++++Y + + K+   +    N +        +Q             +   
Sbjct: 616 TAYAANDEFALSSEYFDKVVKTSTDTHLVANAEIYMVQNDIEQ-------------NQEA 662

Query: 434 QRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVR 493
           +    +K +   Y   T + +K         L     +   +  +     L  S+ + + 
Sbjct: 663 KAFSGIKSLAKKYQ-NTVYADKVLAVARSLYLKTGDTAGYQNFAKNLGVGLDKSEIDEIN 721

Query: 494 SSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTET-----RYNTDHKSNKF 548
            S A      L A  +         K  A  + S    Q   E      +   D K+ K 
Sbjct: 722 LSTAR----QLYAKKQYEKAIPYYEKYLAQNVSSNTAFQAQYELGESYYQSGDDAKALKS 777

Query: 549 DSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQI 606
            +   +Y N    +    +A    +K+K       L  + DS N  +      + M+ 
Sbjct: 778 FNFVTAYPNDYQEEARIRSAQILLSKNKGEEAAEHLAKLVDSNNPKIKSFAQQELMKY 835


>gi|322378477|ref|ZP_08052928.1| Methyl-accepting chemotaxis protein [Helicobacter suis HS1]
 gi|321149079|gb|EFX43528.1| Methyl-accepting chemotaxis protein [Helicobacter suis HS1]
          Length = 432

 Score = 38.2 bits (87), Expect = 4.6,   Method: Composition-based stats.
 Identities = 25/215 (11%), Positives = 64/215 (29%), Gaps = 12/215 (5%)

Query: 333 TELYNLQQFKSVAAPDV-ARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEI 391
           T+ Y     +  +        K ++      +L+   +   +           A    + 
Sbjct: 206 TQEYRDFWNRLKSGQFTRGTFKRLTKSGKTVYLEASYNPVFNRDGEIYKFIKFAWDATDR 265

Query: 392 LEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTS 451
            EK+H           ++                ++ A++++  +  V  +    +  ++
Sbjct: 266 EEKAHMVIDLIRENQQLTDHGNEMIEK--TTSNIQNVANTMKNNSNLVNTLSAQSDSIST 323

Query: 452 HFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVRLS 511
                ++   +T L+   A+     I  A           V      + +    +V  +S
Sbjct: 324 ITQTIKDVADQTNLLALNAA-----IEAARAGEHGRGFAVVADEVRKLAERTGKSVTEIS 378

Query: 512 SEFSDDAKNAAMV---ILSGMK-HQKDTETRYNTD 542
           +      +  + V   I +G +  QK  +  Y T 
Sbjct: 379 AIIGQIREITSQVVTDITAGTQESQKTVDLSYETK 413


>gi|260588935|ref|ZP_05854848.1| hypothetical membrane protein [Blautia hansenii DSM 20583]
 gi|260540714|gb|EEX21283.1| hypothetical membrane protein [Blautia hansenii DSM 20583]
          Length = 730

 Score = 38.2 bits (87), Expect = 4.7,   Method: Composition-based stats.
 Identities = 63/368 (17%), Positives = 121/368 (32%), Gaps = 50/368 (13%)

Query: 269 DDTKRRRLLEHLSSRDNALNTKLRKETQAQARRIDAQLNHGITVKPSELIPLEDYTQAYG 328
           DD +   +L +L+ ++NA+  K+  +     R+  A+L    T+    L  ++  +    
Sbjct: 128 DDVEHSDILYYLNEKENAIAPKVTDKGAGAVRKQIAEL-FTKTISQVGLQLMDSLSSMMS 186

Query: 329 VEQGTELYNLQQFK--------SVAAPDVARIKLMSTF------DAKKFLQKIDDEYISN 374
            E   E+                 A+  +     M+            FL++      +N
Sbjct: 187 KEDSQEMIGRVHENITEIADSLLAASGTIKAFSNMTDSMGNTLESTSSFLKQTGSNADTN 246

Query: 375 PSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFAD---S 431
            SL   +       K+ L  +       L   +  +    +Q+D       +  A    S
Sbjct: 247 LSLLTDTGKSVKSLKDALSGTTDSVNDVLAAGSDVYQAVSEQVDETFSSLSQDAAAAGQS 306

Query: 432 LRQRAGFVKKIKDDY----------NLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAY 481
           L   AG ++ I D Y          + +        + QL T + K  AS  +       
Sbjct: 307 LNGLAGQIQTIIDRYAAFRDSLQGISDSLPEVFPHIKEQLGTVIGKLNAS--IAQQEAVR 364

Query: 482 NTLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYNT 541
           + L +   + +  S   + D G        SE  + AK +A  I       ++ +T Y  
Sbjct: 365 DKL-NEAADKISQS---VSDAGN-----YQSELKELAKQSAQQI-------QNVQTDYEK 408

Query: 542 DHKSNKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVS 601
           + K N  D L+ +  N   T  + S      ++  + I+     +  D G         +
Sbjct: 409 NVKGN-LDQLFQTLSN---TNKDVSLILSKLDEGAQGIEDLSGSAASDLGKLKTALDTSA 464

Query: 602 DAMQIVLG 609
             +    G
Sbjct: 465 SLLDEASG 472


>gi|322380318|ref|ZP_08054532.1| methyl-accepting chemotaxis protein [Helicobacter suis HS5]
 gi|321147253|gb|EFX41939.1| methyl-accepting chemotaxis protein [Helicobacter suis HS5]
          Length = 432

 Score = 38.2 bits (87), Expect = 4.9,   Method: Composition-based stats.
 Identities = 25/215 (11%), Positives = 63/215 (29%), Gaps = 12/215 (5%)

Query: 333 TELYNLQQFKSVAAPDV-ARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEI 391
           T+ Y     +  +        K ++      +L+   +               A    + 
Sbjct: 206 TQEYRDFWNRLKSGQFTRGTFKRLTKSGKTVYLEASYNPVFDRDGEIYKFIKFAWDATDR 265

Query: 392 LEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKKIKDDYNLTTS 451
            EK+H           ++                ++ A++++  +  V  +    +  ++
Sbjct: 266 EEKAHMVIDLIRENQQLTDHGNEMIEK--TTSNIQNVANTMKNNSNLVNTLSAQSDSIST 323

Query: 452 HFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIEDNGLSAVVRLS 511
                ++   +T L+   A+     I  A           V      + +    +V  +S
Sbjct: 324 ITQTIKDVADQTNLLALNAA-----IEAARAGEHGRGFAVVADEVRKLAERTGKSVTEIS 378

Query: 512 SEFSDDAKNAAMV---ILSGMK-HQKDTETRYNTD 542
           +      +  + V   I +G +  QK  +  Y T 
Sbjct: 379 AIIGQIREITSQVVTDITAGTQESQKTVDLSYETK 413


>gi|71668012|ref|XP_820950.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70886314|gb|EAN99099.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 1172

 Score = 37.9 bits (86), Expect = 5.6,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 4/89 (4%)

Query: 389  KEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAG-FVKKIKDDYN 447
             ++  +SH   +++ ++D   W  +      +  D +ES A   RQR    +  +K  Y 
Sbjct: 982  FDLFIRSHEDVLEQRSEDDKEWDWEKSHEQEMDEDNDESNAAYFRQRFTRLIGWVKRHYG 1041

Query: 448  ---LTTSHFNKTEENQLRTQLVKRPASES 473
                  +  +      L   + +  A + 
Sbjct: 1042 KYLSNDAITSFGTSGTLSEFMRECSAPQR 1070


>gi|320011392|gb|ADW06242.1| band 7 protein [Streptomyces flavogriseus ATCC 33331]
          Length = 349

 Score = 37.9 bits (86), Expect = 6.6,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 55/145 (37%), Gaps = 4/145 (2%)

Query: 352 IKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKYKEIL---EKSHRQSMQELNQDAI 408
            K++    A   ++            SL S +  +   ++L   EK ++     ++  A+
Sbjct: 93  FKVVDPASAVIQVEDYRFAVSQMAQTSLRSIIGKSDLDDLLSDREKLNQGLELMIDSPAV 152

Query: 409 SWGIKYKQIDPLRFDTEESFADSLRQRA-GFVKKIKDDYNLTTSHFNKTEENQLRTQLVK 467
            WG++  +++       E+   S+ ++A    ++     N         +  Q   Q+  
Sbjct: 153 GWGVQIDRVEIKDVSLPETMKRSMARQAEADRERRARVINADAELQASKKLAQAAQQMST 212

Query: 468 RPASESVDLIRGAYNTLSDSDKEGV 492
           +PA+  + L++      ++ +   V
Sbjct: 213 QPAALQLRLLQTVVAVAAEKNSTLV 237


>gi|319900345|ref|YP_004160073.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
           helcogenes P 36-108]
 gi|319415376|gb|ADV42487.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
           helcogenes P 36-108]
          Length = 617

 Score = 37.9 bits (86), Expect = 6.8,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 60/205 (29%), Gaps = 14/205 (6%)

Query: 372 ISNPSLSLASTMMATKYKEILEKSH--RQSMQELNQDAISWGIKYKQIDPLRFDTEESFA 429
              P  + A   +A+ Y+E  +K    RQ    +    +    K   +       E+   
Sbjct: 271 EEEPENAQAMYSLASYYEETGQKELYERQLDTLMLNKKVPSDTKLNVMRQFIMQNEQEGK 330

Query: 430 DS---LRQRAGFVKKIKDDYNLTTSH--------FNKTEENQLRTQLVKRPASESVDLIR 478
           DS   +      +++  DD  L   +         NK     LR  L   PA+ +  ++ 
Sbjct: 331 DSTRVITLFGRIMEQDPDDAQLPMLYVQYLLAKNMNKEALPVLRQVLDIDPANTAARMML 390

Query: 479 GAYNTLSDSDKEGVRSSFAHIEDNGLSAVVRLSSEFSDDAKN-AAMVILSGMKHQKDTET 537
                  +   E +R   A IE +                      VI    K       
Sbjct: 391 IGDAAQKEDAPEIIRLCEAGIETSPDKLEFYYYLAMGYAQTERTDDVIAVCRKALGHVNA 450

Query: 538 RYNTDHKSNKFDSLYDSYINTPLTK 562
               +  S+ +  + DSY      K
Sbjct: 451 DSKKEVVSDFYAFIGDSYHTKKQNK 475


>gi|118389852|ref|XP_001027971.1| hypothetical protein TTHERM_00497830 [Tetrahymena thermophila]
 gi|89309741|gb|EAS07729.1| hypothetical protein TTHERM_00497830 [Tetrahymena thermophila
           SB210]
          Length = 797

 Score = 37.5 bits (85), Expect = 7.5,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 58/154 (37%), Gaps = 9/154 (5%)

Query: 329 VEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISNPSLSLASTMMATKY 388
            E   + Y  Q+F            +   +D +   QK+ + +  N + +     ++++ 
Sbjct: 617 EENQKKQYEEQKFNQNLGQY-GNQNINKQYDQQDEFQKLLEIHRKNFNEN-RQNFISSEL 674

Query: 389 KEILEKSHRQSM--QELNQDAISWGIKYKQIDPLRFDTEESF-ADSLRQRAG--FVKKIK 443
            +   K     M  Q    D  +  I+++Q+  L     +    + L+ +     +  + 
Sbjct: 675 DKQFSKGIDYRMLDQLTVDDLSNLLIQFQQLKMLESPELQGLNVNELQNQFNNLNIDPLS 734

Query: 444 DDYNLTTSHFNKTEENQLRT--QLVKRPASESVD 475
            +  L  S+ N  E  +L    Q++++   ++V 
Sbjct: 735 QNLGLDFSNLNPQEMMELAQFNQMLQQNILQTVQ 768


>gi|71031650|ref|XP_765467.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68352423|gb|EAN33184.1| hypothetical protein TP02_0899 [Theileria parva]
          Length = 1406

 Score = 37.5 bits (85), Expect = 8.1,   Method: Composition-based stats.
 Identities = 45/384 (11%), Positives = 108/384 (28%), Gaps = 60/384 (15%)

Query: 268 LDDTKRRRLLEHLSSRD----NALNTKLRKETQAQARRIDAQLNHGITVKPSELIPLEDY 323
           LDD K + +     S++     A +     ET      +D+Q++  +  K  EL   E  
Sbjct: 375 LDDFKHKPMFREEKSQEIDSHEAESDSNSDETLEDEESMDSQMDQFVDQKDEEL--FEST 432

Query: 324 TQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFL------QKIDDEYISNPSL 377
            +    +            ++ + ++    ++     ++ +      +KI+ E     + 
Sbjct: 433 VRCESFKSSERKPEEFDLNNLTSDEL----VLDDQQVEELVKNVEIPEKIEPEADEKEAE 488

Query: 378 SLASTMMATKYKEILE---KSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQ 434
            LA T       + +     + ++    L      +    K    L+      F D    
Sbjct: 489 ELAETEDIENLYKDISYVMGTLKRINTYLESKPPKFVANSKTYQELQASLHRDFFDKYLT 548

Query: 435 RAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESV---DLIRGAYNTLSDSDKEG 491
                   K           + EE QL     ++   + +   DL       L       
Sbjct: 549 YGSDKLSKKK--------LLEQEEKQLAQ--EEKKVRDEILGKDLFSNMDENLYKRLSNI 598

Query: 492 VRSSFAHIEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYNTDHKSNKFDSL 551
                     +    V+   +                      +   + +    +    +
Sbjct: 599 YLPRKNSTFSSN---VLPYDNSLV-------------KSSISSSVPPFPSYSTYSINTCI 642

Query: 552 YDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNT 611
            + Y N P+T    +    N  +D      Y    ++ S    L++              
Sbjct: 643 DNPYNNAPVTIDSHTPTSYNPGRDTYYTINYNPADLQKSSEL-LDKK-----------GI 690

Query: 612 PVNINESMLMPPRGMSKTDFEDRL 635
             +   + ++  +G+   + +++L
Sbjct: 691 YSDSKRAEIVFTKGIPSDNLKNKL 714


>gi|210134803|ref|YP_002301242.1| flagellin A [Helicobacter pylori P12]
 gi|210132771|gb|ACJ07762.1| flagellin A [Helicobacter pylori P12]
          Length = 510

 Score = 37.5 bits (85), Expect = 8.5,   Method: Composition-based stats.
 Identities = 32/239 (13%), Positives = 76/239 (31%), Gaps = 21/239 (8%)

Query: 384 MATKYKEILEKSHRQSMQELNQDAISWGIKY-----KQIDPLRFDTEESFADSLRQRAGF 438
           MA +    +   +      L Q+A+   ++      +        +  + ADSLR +A  
Sbjct: 1   MAFQVNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASS 60

Query: 439 VKKIKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAH 498
           + +   + N                Q+  +   E + ++       + + ++G  +    
Sbjct: 61  LGQAIANTNDGMGII----------QVADKAMDEQLKILDTVKVKATQAAQDGQTTESRK 110

Query: 499 IEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTETRYNTDHKSNKFDSLYDSYINT 558
              + +  +++      +        +LSG    K+ +    ++       S+  S  +T
Sbjct: 111 AIQSDIVRLIQGLDNIGNTTTYNGQALLSGRFTNKEFQVGAYSN------QSIKASIGST 164

Query: 559 PLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQIVLGNTPVNINE 617
              K+ Q                     +    + TL  V+VS +    +G     IN+
Sbjct: 165 TSDKIGQVRIATGALITASGDISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINK 223


>gi|119510966|ref|ZP_01630088.1| hypothetical protein N9414_01295 [Nodularia spumigena CCY9414]
 gi|119464405|gb|EAW45320.1| hypothetical protein N9414_01295 [Nodularia spumigena CCY9414]
          Length = 692

 Score = 37.1 bits (84), Expect = 9.6,   Method: Composition-based stats.
 Identities = 47/352 (13%), Positives = 99/352 (28%), Gaps = 40/352 (11%)

Query: 326 AYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEYISN-PSLSLASTMM 384
           A+  +QG   +N          D+  +    + D   F Q   DE   N P  +    ++
Sbjct: 116 AWWEDQGRPKFNPF--------DIKTVGQYESVDPTSFHQSKFDEEAKNLPIETTEPILL 167

Query: 385 ATKYKEILEKSH---RQSMQELNQDAISWGIKYKQI-DPLRFDTEESFADSLRQRAGFVK 440
             +   +   +    R+         +SW    + +  P  F   +    S R      +
Sbjct: 168 QPQQYSLETINILAFRKFNILNKIQPVSWASDVEALEKPRSFQIIQP--ASTRAYEILQR 225

Query: 441 KIKDDYNLTTSHFNKTEE--NQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAH 498
            IK    ++T      E   + +R+ +         D ++     L D     + S + H
Sbjct: 226 AIKQTPQVSTPVVGDEEALKSAIRSLMNSSQVKP--DAVKVIKEALGDKQ---ITSEYWH 280

Query: 499 IEDNGLSAVVRLSSEFSDDAKNAAMVILSGMKHQKDTET------------RYNTD-HKS 545
              +G  A   ++ +    ++   ++ L  M   K                    +    
Sbjct: 281 TLFDGQGAKTAINQKI-YSSQMVRLITLRAMVIPKTIPEFLTWLNVKAGKNPDENETISL 339

Query: 546 NKFDSLYDSYINTPLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLNRVRVSDAMQ 605
           N   ++   +    LT+  +         D      + L        + + R    + ++
Sbjct: 340 NFQSAVGKQFPKYQLTEGIKLLLPKLLQGDITPELFHWL--FIKGRAWDVCRSEFINDVR 397

Query: 606 IVLGNTPVNINESMLMPPRGMSKTDFEDRLWYATKDTGEYDPYTIKYMNVGS 657
             L     + N              F+   W   K  G +      Y  +  
Sbjct: 398 YDLQLIYKHFNSGQQTHTFSFDALKFQKVTW--QKIIGSWRAINGGYYQLDD 447


>gi|294954476|ref|XP_002788187.1| hypothetical protein Pmar_PMAR006880 [Perkinsus marinus ATCC 50983]
 gi|239903402|gb|EER19983.1| hypothetical protein Pmar_PMAR006880 [Perkinsus marinus ATCC 50983]
          Length = 887

 Score = 37.1 bits (84), Expect = 9.6,   Method: Composition-based stats.
 Identities = 46/289 (15%), Positives = 100/289 (34%), Gaps = 22/289 (7%)

Query: 247 ERSLEVVEDVSKAIGLAGWDRLDDTKRRRLLEHLSSRDNALNTKLRKETQAQARRI---- 302
           E  L  +EDV+ A         D+ + RR+ E +       + ++R+E +AQ +RI    
Sbjct: 181 EEKLRALEDVAAAASAGN----DEDRHRRIEERMLRYKRECDNRVREEVEAQVQRIRSIE 236

Query: 303 --DAQLNHGITVKPSELIPLEDYTQAYGVEQGTELYNLQQFKSVAAPDVARIKLMSTFDA 360
             +A+L     ++  +    E+  +     +       Q+         + +   +    
Sbjct: 237 LPNARLEAAAQLRAEQRTAREELEREAKEREARFKLVEQRTLERLRLKESELDRRAVSSR 296

Query: 361 KKFLQKIDDE--YISNPSLSLASTMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQID 418
           +  L+ ++ E   +   + +LA+      + E   + +RQ +QE  +   +   +++ + 
Sbjct: 297 ETLLRDLEIERAGVREKARALAARENELAHWEKRIEGNRQDIQEREEKLRTLRQQFEDLK 356

Query: 419 PLRF--------DTEESFADSLRQRAGFVKKIKDDYNLTTSHFNKTEENQLRTQLVKRPA 470
                          E+   +L ++   V K++              +  L T      A
Sbjct: 357 NKEVELATLKIKAEMETDRRALIEQQNEVDKLRACLETEEVRLGAVHDTHLSTGQQLLTA 416

Query: 471 SESVDLIRGAYNTLSDSDKEGVRS--SFAHIEDNGLSAVVRLSSEFSDD 517
               D +      L +S  E  R         +N   AV ++  E S  
Sbjct: 417 ERERDALAVQVEQLQESLAEARRQSRLLEATIENDRRAVEKMEHELSMT 465


>gi|168050999|ref|XP_001777944.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670704|gb|EDQ57268.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 429

 Score = 37.1 bits (84), Expect = 9.6,   Method: Composition-based stats.
 Identities = 31/256 (12%), Positives = 73/256 (28%), Gaps = 27/256 (10%)

Query: 382 TMMATKYKEILEKSHRQSMQELNQDAISWGIKYKQIDPLRFDTEESFADSLRQRAGFVKK 441
           T+   KY   +  +   +     Q A +  +       L+  T E    S+  +      
Sbjct: 29  TLWPGKYHSPVTAALWHASSSFAQRARNVSMDSPAQITLQSKTPEENRTSVVYKFSSDTS 88

Query: 442 IKDDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSDSDKEGVRSSFAHIED 501
           ++++Y    + F      ++   L    A      + G       SD +        +  
Sbjct: 89  LREEYRNPWNLF------RIGKLLEDLDA------LAGTIAVKHCSDSDHTTRPLLLVTA 136

Query: 502 NGLSAVVRLSSEFSDDAKNAAMVILSGMKHQK---DTETRYNTDHKSNKFDSLYDSYINT 558
           +      +       D + A  V   G    +   +     +       F  +   +   
Sbjct: 137 SVDKISTKKRLRVDVDLELAGSVTWVGRSSMEIRMEVIQPKDDVALIANFTFVARDWRTQ 196

Query: 559 ---------PLTKLEQSTAGGNFNKDKEAIKLYLLGSMKDSGNYTLN-RVRVSDAMQI-- 606
                    P T+ E+        +D    KL +   +  +  +      R++  ++   
Sbjct: 197 KAAPVNHLVPQTEEEKQLFAMGAARDAHRKKLRMGNQLSSTSPFAKEYNDRLTQILREGR 256

Query: 607 VLGNTPVNINESMLMP 622
           VL   P   + + ++ 
Sbjct: 257 VLCEMPALGDRNSILM 272


>gi|145501983|ref|XP_001436971.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124404117|emb|CAK69574.1| unnamed protein product [Paramecium tetraurelia]
          Length = 485

 Score = 37.1 bits (84), Expect = 9.6,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 68/199 (34%), Gaps = 23/199 (11%)

Query: 335 LYNLQQFKSVAAPDVARIKLMSTFDAKKFLQKIDDEY--ISNPSLSLASTMMATKYKEIL 392
           LYN +  +  A  ++  ++L    +  K + +   E               + +  ++ L
Sbjct: 156 LYNNEINEKYAFSNLETVQLFQKLNELKQINRQRSEQPQEYVELEGQRFYHVLSDLQDYL 215

Query: 393 EKSHRQ---SMQELNQD---AISWGIKYKQIDPLRF-----DTEESFADS----LRQRAG 437
           +K   +     +         I   ++ KQ++P        +++          L  RA 
Sbjct: 216 DKKVDKKTLIHEMRAFQAFYPIRRKLQVKQLNPGDSLCQGTESQTDITQKATYRLFDRAR 275

Query: 438 FVKKIK-DDYNLTTSHFNKTEENQLRTQLVKRPASESVDLIRGAYNTLSD-----SDKEG 491
            +  +K + +N     FN  E      QL +   S+ ++ +R             S +  
Sbjct: 276 TLANMKCEVFNTNNYVFNVKEVPNFGQQLRRNHFSQLIEELRENGLKTPREINEVSPENS 335

Query: 492 VRSSFAHIEDNGLSAVVRL 510
           +++S     +N +  + + 
Sbjct: 336 IKASQVESSENDVKPIRKF 354


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.309    0.124    0.308 

Lambda     K      H
   0.267   0.0385    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,230,790,841
Number of Sequences: 14124377
Number of extensions: 130556008
Number of successful extensions: 316355
Number of sequences better than 10.0: 267
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 235
Number of HSP's that attempted gapping in prelim test: 316136
Number of HSP's gapped (non-prelim): 336
length of query: 707
length of database: 4,842,793,630
effective HSP length: 147
effective length of query: 560
effective length of database: 2,766,510,211
effective search space: 1549245718160
effective search space used: 1549245718160
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 85 (37.4 bits)