BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781208|ref|YP_003065621.1| hypothetical protein
CLIBASIA_05575 [Candidatus Liberibacter asiaticus str. psy62]
(578 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254781208|ref|YP_003065621.1| hypothetical protein CLIBASIA_05575 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040885|gb|ACT57681.1| hypothetical protein CLIBASIA_05575 [Candidatus Liberibacter
asiaticus str. psy62]
gi|317120673|gb|ADV02496.1| hypothetical protein SC1_gp080 [Liberibacter phage SC1]
gi|317120817|gb|ADV02638.1| hypothetical protein SC1_gp080 [Candidatus Liberibacter asiaticus]
Length = 578
Score = 1194 bits (3088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 578/578 (100%), Positives = 578/578 (100%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC
Sbjct: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS
Sbjct: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL 180
LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL
Sbjct: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL 180
Query: 181 SISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLT 240
SISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLT
Sbjct: 181 SISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLT 240
Query: 241 TGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGR 300
TGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGR
Sbjct: 241 TGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGR 300
Query: 301 SISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSF 360
SISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSF
Sbjct: 301 SISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSF 360
Query: 361 GAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSK 420
GAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSK
Sbjct: 361 GAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSK 420
Query: 421 GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQLADHLF 480
GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQLADHLF
Sbjct: 421 GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQLADHLF 480
Query: 481 NQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSA 540
NQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSA
Sbjct: 481 NQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSA 540
Query: 541 ASFPNDNRGGTSLWMLVALSAGEERSFTVRLNLLDDFK 578
ASFPNDNRGGTSLWMLVALSAGEERSFTVRLNLLDDFK
Sbjct: 541 ASFPNDNRGGTSLWMLVALSAGEERSFTVRLNLLDDFK 578
>gi|315122895|ref|YP_004063384.1| hypothetical protein CKC_05755 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496297|gb|ADR52896.1| hypothetical protein CKC_05755 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 588
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/567 (39%), Positives = 337/567 (59%), Gaps = 23/567 (4%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M +TK SF+ GE+SP+++QSR DL LH+QG+++ N+IPL+ G LV P + Y
Sbjct: 1 MPKGAYTKRSFAGGEVSPQIMQSRSDLELHSQGLSQCFNMIPLQDGSLVRRPPLYRYEHI 60
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
L P+++R+ SF++ L +FG+KK+ V V T P F + Y TPY+F++ +
Sbjct: 61 DLPPKASRILSFALGGDDAVLFIFGEKKMVYVEV---TGIKPPQFIRFYDTPYSFREAEQ 117
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL 180
L+ A G+ V VH H P+ + + + G F+++ F PPPWLG + G K +AKL
Sbjct: 118 LDVARMGTLIVLVHPKHSPYKIEFTEAG----VIFEKMVFAPPPWLGLREVGGKKHDAKL 173
Query: 181 SISQADTSTARIT--SDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRS 238
++ + T +IT S + IFK D GR +RLG P +W NT Y A++ KVYR
Sbjct: 174 RVTLSATRKGKITVTSTLPIFKTKDVGRMLRLGWLPKDWTANTLYPENAFMQMYGKVYRC 233
Query: 239 LTTGRSGDRFGYSKGATYVKDNNITWITV-------LNLSSKTSRESASGAVAPYYVWGD 291
+T G SG F ++ TY++D +TW + ++ K++ + PYYVWG+
Sbjct: 234 ITEGISGKEFEDNRRDTYIRDGGVTWKVIASSQALSVDKDGKSTLGTGGQYRTPYYVWGE 293
Query: 292 IKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGD 351
I + + +++ V S + W MSAWGE+EGYPSHV+F+NNRL FSGSK D
Sbjct: 294 IVNCT-GAKTVEVMLHEGFCVTDSNSTLYWNMSAWGEREGYPSHVSFYNNRLCFSGSKFD 352
Query: 352 ELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSL 411
+VY S + F DFS D G D K+L+ A+TD + S I W P +G+++G DTSL
Sbjct: 353 PQAVYFSGYNTFTDFSPDTIEGNVDYRKSLSVAITDDTMSAIRWFRPMEKGLVIGTDTSL 412
Query: 412 WLLSISLSKGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNE 471
W++ + +G ++ RR++G GVY PP+S+GD L+FV G GRRI+ I G++EQGF+F E
Sbjct: 413 WIVILDFERGFNLVSRRLAGIGVYEAPPLSIGDELIFVQGAGRRIQIIGGASEQGFQFLE 472
Query: 472 ITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMI 531
+TQ DHL + RI QL YQE+P+S++WV+ N+ LLGC A + +WH H +
Sbjct: 473 LTQNVDHLLDYRIRQLAYQEDPYSLLWVL-----NNKGELLGCSLHANSKEKGSWHVHKL 527
Query: 532 SDKHY-VLSAASFPNDNRGGTSLWMLV 557
+ ++S +S ++G T++W+L+
Sbjct: 528 GGRGVKIMSLSSCLCLDQGETTVWLLL 554
>gi|315121933|ref|YP_004062422.1| hypothetical protein CKC_00915 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495335|gb|ADR51934.1| hypothetical protein CKC_00915 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 588
Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/568 (39%), Positives = 334/568 (58%), Gaps = 23/568 (4%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M +TK SF+ GE+SP+++QSR DL LH+QG+++ N+IPL G LV P + Y
Sbjct: 1 MPKGAYTKRSFAGGEVSPQIIQSRSDLELHSQGLSQCFNMIPLSDGSLVRRPPLHRYEHI 60
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
L P+++R+ SF++ L +FG+KK+ V V T P F + Y TPY+F++ +
Sbjct: 61 DLPPKASRILSFALGGDEAVLFIFGEKKMVYVEV---TGIKPPQFIRFYGTPYSFREAEQ 117
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL 180
L+ A G+ V VH H P+ + + + G F+++ F PPPWLG + G K +AKL
Sbjct: 118 LDVARMGTLIVLVHPKHSPYKIEFTEAG----VIFEKMVFAPPPWLGRREVGGKKHDAKL 173
Query: 181 SISQADTSTARIT--SDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRS 238
++ + T +IT S + IFKP D GR + LG P +W NT Y A++ KVYR
Sbjct: 174 RVTLSATRKGKITVTSTLPIFKPKDVGRMLCLGWLPKDWTANTLYPENAFMQMYGKVYRC 233
Query: 239 LTTGRSGDRFGYSKGATYVKDNNITWITV-------LNLSSKTSRESASGAVAPYYVWGD 291
+T G SG F ++ TY++D +TW + ++ K++ + PYYVWG+
Sbjct: 234 ITEGISGKEFEDNRRDTYIRDGGVTWKVIASSQALSVDKDGKSTLGTGGQYRTPYYVWGE 293
Query: 292 IKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGD 351
I + + +++ V S + W MSAWGE+EGYPSHV+F+NNRL FSGSK D
Sbjct: 294 IVNCT-GAKTVEVMLHEGFCVTDSNSTLYWNMSAWGEREGYPSHVSFYNNRLCFSGSKFD 352
Query: 352 ELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSL 411
+VY S + F DFS D G D K+L+ A+TD + S I W P +G+++G DTSL
Sbjct: 353 PQAVYFSGYNTFTDFSPDTIEGNVDYRKSLSVAITDDTMSAIRWFRPMEKGLVIGTDTSL 412
Query: 412 WLLSISLSKGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNE 471
W++ + +G ++ RR++G GVY PP+S+GD L+FV G GRRI+ I G++EQGF+F E
Sbjct: 413 WIVILDFERGFNLVSRRLAGIGVYEAPPLSIGDELIFVQGAGRRIQIIGGASEQGFQFLE 472
Query: 472 ITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMI 531
+TQ DHL + RI QL YQE+P+S++WV+ N+ LL C A + +WHTH
Sbjct: 473 LTQNVDHLLDYRIRQLAYQEDPYSLLWVL-----NNKGELLSCSLHANSKEKGSWHTHKS 527
Query: 532 SDKHY-VLSAASFPNDNRGGTSLWMLVA 558
++S +S ++G T++W LV+
Sbjct: 528 GGGWVKIMSLSSCLCLDQGETTIWFLVS 555
>gi|317120716|gb|ADV02538.1| hypothetical protein SC2_gp080 [Liberibacter phage SC2]
gi|317120777|gb|ADV02598.1| hypothetical protein SC2_gp080 [Candidatus Liberibacter asiaticus]
Length = 590
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 167/573 (29%), Positives = 265/573 (46%), Gaps = 51/573 (8%)
Query: 8 KHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSN 67
K+SF++GE+SP + QS +L ++ +A N IPLR G L+ P + Y +
Sbjct: 8 KNSFASGEVSPFVHQSGSNLKIYQSCLAHCHNYIPLRTGALMRRPGTRIYHVFDDVDKPQ 67
Query: 68 RVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVFG 127
R+FSF ++V G KL I R T + PY +D +E A
Sbjct: 68 RLFSFVKDAYTAYIIVLGYLKLHIFERRMGGCSKVT----TIEVPYKKEDVDEIEVAQNI 123
Query: 128 STAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQADT 187
T VH HPP L ++ D + F E+ F P L + I K + L +T
Sbjct: 124 DTLWMVHPKHPPCQL-ELKGKD---WEFKEVLFKHVPPLKEQFIDDKKVSINLKTPFENT 179
Query: 188 STAR-----ITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTG 242
T + + +D ++FK +D GR + LG P W +T Y +Y+V +D++ + + G
Sbjct: 180 ETGKTGMVSVEADGEMFKEMDIGRELNLGFRPQRWIPDTWYLDNSYVVHNDRLLKCINKG 239
Query: 243 RS-GDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVW--GDIKDVSKDG 299
+S + +S KD + W V ES G +W G IK K
Sbjct: 240 KSQSTEWTFSDKEHQQKDGSCLWEKV---------ESTKGNARNLLIWVTGVIKRF-KTA 289
Query: 300 RSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSS 359
+ + + + Q + W + WG++EGYPS +TF NRL+ SG K + +V+ S
Sbjct: 290 KCVLLELKGAFPLQNDLPTKHWLLGEWGQKEGYPSCITFFGNRLVLSGGKHNPQTVHFSK 349
Query: 360 FGAFYDFSLDGEY-GCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSIS- 417
F DF+ E G D T + + + I W+ G+LVG +++LWL++ +
Sbjct: 350 LDDFTDFNQISEQGGNTDLTSSFSVLLGSDVRQGIQWLSHTDSGLLVGTESALWLITQTS 409
Query: 418 ----LSKGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISG-----STEQGFR 468
+SK ++ R + G A P+ VG VF+ GR + + G +T+ +R
Sbjct: 410 QNEVVSKA-TVAIRSIGNFGSIAVSPILVGSHCVFIKDTGRDLISLVGNRSADNTKTEYR 468
Query: 469 FNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHT 528
F ++ A+H+ + + + V Q+ P+SI+WVVL RL+GC F + E AWHT
Sbjct: 469 FRDLNLFAEHILTKGVWEAVLQQSPYSIIWVVLRDG-----RLVGCTFDPDNEV-CAWHT 522
Query: 529 HMI----SDKHYVLSAASFPNDNRGGTSLWMLV 557
H + + H + S ASF + G LW+LV
Sbjct: 523 HDLGGFYTQIHSLTSCASFLD---GQDDLWLLV 552
>gi|227355852|ref|ZP_03840245.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
gi|227164171|gb|EEI49068.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
Length = 820
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 120/517 (23%), Positives = 218/517 (42%), Gaps = 62/517 (11%)
Query: 10 SFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNRV 69
SFS GE++P L R DL+ ++ + K N I +YG + + P + + + + +R+
Sbjct: 9 SFSGGEIAPSLY-GRVDLAKYSTALRKCHNFIVRQYGGVENRPGTRFIAETKYQNKKSRL 67
Query: 70 FSFSIPDGGYALLVFGDKKLQIV-----VVRSSTKWSPALFGKTYKTPYTFKDNKSLEYA 124
F L FGD+ +++ V+ + + +F TPY D L+Y
Sbjct: 68 IPFQFSTVQTYALEFGDRYIRVFKDGGQVLYADGEHKGEVF--ELATPYKEADLFDLKYT 125
Query: 125 VFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSI-S 183
VH D+PP L D D E K +G + ++ + + +
Sbjct: 126 QSADVMTIVHTDYPPMELQRY-DHDDWKLVSVETK--------NGPFEDINTDKAMKVYA 176
Query: 184 QADTSTARITSDMKIFKPLDKGRSIRLGCHP----PEWAKNTNYSIGAYIVADDKVYRSL 239
A T +TS IF G+ L P W + ++ AD YR+
Sbjct: 177 SASTGQITLTSTHDIFGSEQIGKQFYLEQRDIDAVPVWETDKTTNLNDQRRADSNYYRAN 236
Query: 240 TTGRSGD-RFGYSKGATYVK---DNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDV 295
+ G++G R +++G ++ D I W + S G V I+ V
Sbjct: 237 SGGKTGTLRPSHTEGMSWDGWGGDTGIQWEYL---------HSGFGIVK-------IETV 280
Query: 296 SKDGRS-----ISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKG 350
S+DG++ +S P S + + S W + W + +GYPS V ++ RL F+GS+
Sbjct: 281 SEDGKTATGKVLSYIP-SNAVGEDNASH-KWARAVWNDVDGYPSTVVYYQQRLFFAGSRA 338
Query: 351 DELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM-HPFGEGVLVGCDT 409
+++ S G + DF G +P + + ++ ++ + H G LV +
Sbjct: 339 YPQTIWASRSGDYKDF------GRNNPIQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTS 392
Query: 410 -SLWLLSISLSKGL---SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE- 464
+ ++ +K L S +G PP+SV + +++ G ++ +S S +
Sbjct: 393 GGEYQITGDQNKVLTPSSFSMSSQGANGSSDLPPISVANIALYIQEKGSAVRDLSYSFDV 452
Query: 465 QGFRFNEITQLADHLFNQ-RILQLVYQEEPHSIVWVV 500
G++ ++T LA+HLF + RI+ + P+SI W +
Sbjct: 453 DGYQGTDLTMLANHLFQRHRIVDWSFTTVPYSIAWCI 489
>gi|268589382|ref|ZP_06123603.1| hypothetical protein PROVRETT_05514 [Providencia rettgeri DSM 1131]
gi|291315409|gb|EFE55862.1| hypothetical protein PROVRETT_05514 [Providencia rettgeri DSM 1131]
Length = 818
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 125/547 (22%), Positives = 231/547 (42%), Gaps = 76/547 (13%)
Query: 10 SFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNRV 69
SFS GE++P L R DL+ ++ + K N I +YG + + P + + + R+
Sbjct: 9 SFSGGEIAPSLY-GRIDLAKYSTALRKCSNFIVRQYGGIENRPGTKFIAAAKYPNKKCRL 67
Query: 70 FSFSIPDGGYALLVFGDKKLQIV-----VVRSSTKWSPALFGKTYKTPYTFKDNKSLEYA 124
F L GDK ++++ V+ + ++ +F TPY D +L++
Sbjct: 68 IPFQFSTVQTYALEMGDKYMRVIKDGGQVLYADGEYKGEIF--ELATPYKEADLFNLKFT 125
Query: 125 VFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNA--KLSI 182
VH D+PP L + D+ K +P +G + ++ KL +
Sbjct: 126 QSADVMTIVHADYPPMELQ--------RYDHDDWKLVPVE-TRNGPFEDINTDKERKLYV 176
Query: 183 SQADTSTARITSDMKIFKPLDKGRSIRLGCHP----PEWAKNTNYSIGAYIVADDKVYRS 238
S A T +++ IF G+ I + P W + +I A YR+
Sbjct: 177 S-ASTGDVTLSATHNIFGAELVGKQIYIEQQAIDAVPVWETDKTTNINDQRRAGANYYRA 235
Query: 239 LTTGRSGD-RFGYSKGATYVK---DNNITW--------ITVLNLSSKTSRESASGAVAPY 286
T G+SG R +++G ++ D I W I +N S T +A+G V Y
Sbjct: 236 NTAGKSGTLRPSHTEGMSWDGWGGDAGIQWEYLHSGFGIVKIN-SVSTDGLTATGKVVLY 294
Query: 287 YVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFS 346
S +V ++ T W S W + +GYPS V ++ RL F+
Sbjct: 295 I------------PSNAVGEENATY--------KWARSVWNDVDGYPSTVMYYQQRLFFA 334
Query: 347 GSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM-HPFGEGVLV 405
GS+ +++ S G + DF G +P + + ++ ++ + H G LV
Sbjct: 335 GSRAYPQTIWASRSGDYKDF------GKNNPIQDDDRIIYTYAGRQVNEIRHLIDVGSLV 388
Query: 406 GCDT-SLWLLSISLSKGL---SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISG 461
+ + ++ +K L S F +G PP++V + +++ G ++ ++
Sbjct: 389 ALTSGGEYQITGDQNKVLTPSSFSFSSQGANGCSDVPPIAVANIALYIQEKGSAVRDLAY 448
Query: 462 STE-QGFRFNEITQLADHLFNQ-RILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAE 519
S + G++ ++T +A+HLF + +I+ + P+SI W + +D+ +LL + E
Sbjct: 449 SFDVDGYQGTDLTIMANHLFQRHQIIDWAFSIVPYSIAWCI---RDDG--KLLSLTYLRE 503
Query: 520 GEGDFAW 526
+ FAW
Sbjct: 504 QQV-FAW 509
>gi|48697202|ref|YP_024932.1| hypothetical protein BcepC6B_gp12 [Burkholderia phage BcepC6B]
gi|47779008|gb|AAT38371.1| gp12 [Burkholderia phage BcepC6B]
Length = 768
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 129/584 (22%), Positives = 228/584 (39%), Gaps = 62/584 (10%)
Query: 10 SFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNRV 69
SF AGELSP LL +R DL+ + G N I GP + + + + + +
Sbjct: 10 SFDAGELSP-LLGARVDLAKYPNGCQVMENFIATVQGPAIRRGGKRFVAATKDSTKQSWL 68
Query: 70 FSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKD--NKSLEYAVFG 127
F + DG +L FGD ++ V R + A TPY D + +A+
Sbjct: 69 LPFIVADGIAYMLEFGDHYIRFFVNRGQLVNAGAPV--EIATPYALADLTTEDGTFAIRA 126
Query: 128 S----TAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSI- 182
+ T H +P LL +F+ + F+ P+ + V S+ + +
Sbjct: 127 TQSADTMYLFHGGYPTQKLLRTS---ATTFSLQPVTFVGGPF------AAVNSDNNVRVH 177
Query: 183 SQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKN--TNYSIGAYIV--ADDKVYRS 238
+ A T + + +F+P D G L + K + IG + D+VY
Sbjct: 178 ASAGTGAVTLVASASVFRPSDVGTLFYLEQEDNSFVKPWVVHQKIGPSELRRVGDRVYLC 237
Query: 239 LTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPY--------YVWG 290
G + + ++ T+ + W S T + GA Y + G
Sbjct: 238 TAVGTATPQVTGTETPTHTSGSR--WDGTGQDESATDEYGSIGAEWEYQHSGYGTVLITG 295
Query: 291 DIKDVSKDGRSISVAPQSQTLFQAGVSVVS----WFMSAWGEQEGYPSHVTFHNNRLLFS 346
D G + P + V ++ W S + +G+P TF NRL
Sbjct: 296 YTNDQVVTGTVATNDPADPGMLPNTVVTLTGTYKWARSLFNSTDGFPQMGTFWRNRLCLM 355
Query: 347 GSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVG 406
+ +SV + F F D + A+ + + + WM + +L+G
Sbjct: 356 RDRWLAMSVS-ADFETFKTKDADQQTD----DSAIVQQLNARQLNKLAWMVE-SDSLLIG 409
Query: 407 CDTSLWLLSISLSK----GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIK-YISG 461
W++ + + +++ R + G PV VG ++FV GR+++ +
Sbjct: 410 MTGDEWVIGPANASQPVSAANLNAARRTSYGSKRIQPVQVGGTIMFVQKAGRKLRDFKYD 469
Query: 462 STEQGFRFNEITQLADHLFNQR------ILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCR 515
+ + ++T++ADH+ R I+ L +Q+EPHS+VW + +L+GC
Sbjct: 470 FSSDNYVSTDVTKIADHITRGRAGTNSGIMSLCFQQEPHSVVWAA-----RADGQLIGCT 524
Query: 516 FSAE-GEGD-FAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLV 557
+ E G D + WH H ++ +V AS P + LW++V
Sbjct: 525 YDEEAGRSDVYGWHRHPDANG-FVECVASMPAPDGASDDLWVIV 567
>gi|212710810|ref|ZP_03318938.1| hypothetical protein PROVALCAL_01878 [Providencia alcalifaciens DSM
30120]
gi|212686507|gb|EEB46035.1| hypothetical protein PROVALCAL_01878 [Providencia alcalifaciens DSM
30120]
Length = 818
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 121/538 (22%), Positives = 228/538 (42%), Gaps = 58/538 (10%)
Query: 10 SFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNRV 69
SFS GE++P L R DL+ ++ + K N + +YG + + P + + + R+
Sbjct: 9 SFSGGEIAPSLY-GRIDLAKYSTALRKCENFLVRQYGGIENRPGTKFIAAAKYPNKKCRL 67
Query: 70 FSFSIPDGGYALLVFGDKKLQIV-----VVRSSTKWSPALFGKTYKTPYTFKDNKSLEYA 124
F L GDK ++++ V+ + + +F T TPY D +L++
Sbjct: 68 IPFQFSTVQTYALEMGDKYMRVIKDGGQVLYADGEHKGEIFELT--TPYKEADLFNLKFT 125
Query: 125 VFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSI-S 183
VH D+PP L + D+ K +P +G + + + +
Sbjct: 126 QSADVMTIVHADYPPMELQ--------RYDHDDWKLVPVE-TRNGPFEDINVDKERKVYV 176
Query: 184 QADTSTARITSDMKIFKPLDKGRSIRLGCHP----PEWAKNTNYSIGAYIVADDKVYRSL 239
A T +T+ IF G+ I + P W + A YR+
Sbjct: 177 SASTGEVTLTATHNIFGAELVGKQIYIEQQAVDAVPVWETDKTTIKNDQRRAGSNYYRAN 236
Query: 240 TTGRSGD-RFGYSKGATYVK---DNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDV 295
T+G+SG R +++G ++ D I W + S G V V D +
Sbjct: 237 TSGKSGTLRPSHTEGMSWDGWGGDTGIQWEYL---------HSGFGIVKINSVSTD--GL 285
Query: 296 SKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSV 355
+ G+ IS P S + ++ + W S W + +GYPS V ++ RL F+GS+ ++
Sbjct: 286 TATGKVISYIP-SNAVGESNATY-KWARSVWNDVDGYPSTVMYYQQRLFFAGSRAYPQTI 343
Query: 356 YLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM-HPFGEGVLVGCDT-SLWL 413
+ S G + DF G +P + + ++ ++ + H G LV + +
Sbjct: 344 WASRSGDYKDF------GKNNPIQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEYQ 397
Query: 414 LSISLSKGL---SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRF 469
++ +K L S F +G PP++V + +++ G ++ ++ S + G++
Sbjct: 398 ITGDQNKVLTPSSFSFSSQGANGCSDVPPIAVANIALYIQEKGSAVRDLAYSFDVDGYQG 457
Query: 470 NEITQLADHLFNQ-RILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAW 526
++T +A+HLF + +I+ + P+SI W + +D+ +LL + E + FAW
Sbjct: 458 TDLTIMANHLFQRHQIIDWAFTIVPYSIAWCI---RDDG--KLLSLTYLREQQV-FAW 509
>gi|221213947|ref|ZP_03586920.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221166124|gb|EED98597.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
Length = 766
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 132/584 (22%), Positives = 221/584 (37%), Gaps = 64/584 (10%)
Query: 10 SFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNRV 69
SF AGELSP LL +R DL+ +A G N I GP V + + + +
Sbjct: 10 SFDAGELSP-LLGARVDLAKYANGCLLLENFIATVQGPAVRRGGKRYVSAIKDSGKQAWL 68
Query: 70 FSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKD--NKSLEYAVFG 127
F + DG +L FGD+ ++ V R A TPY D + +A+
Sbjct: 69 LPFIVSDGIAYMLEFGDQYIRFYVNRGQLVNDSAPV--EIATPYALADLVTEDGTFAIRA 126
Query: 128 S----TAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSIS 183
+ T H +P L +F + F+ P+ + V N + +
Sbjct: 127 TQSADTMYLFHGAYPTQKLSRTS---ATTFELQPVTFVGGPF------ATVNDNNSIRVQ 177
Query: 184 QADTS-TARITSDMKIFKPLDKGRSIRLGCHPPE----WAKNTNYSIGAYIVADDKVYRS 238
+ S +T++ +F+ D G + P WA + + D+ YR
Sbjct: 178 ASGQSGDVTLTANADVFRASDVGTLFYVEQEQPTGIVPWAVHAESHVNDIRRVGDRTYRC 237
Query: 239 LTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSR-------ESASGAVAPYYVWGD 291
G + + + T + W + E A + G
Sbjct: 238 TQIGLNAPQV--TGQETPIHTEGRRWDGDGRDPDGDTYGSIGVEWEYQHSGYATVLITGF 295
Query: 292 IKDVSKDGRSISVAPQSQTLFQAGV---SVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGS 348
+ + P + V W S + +G+P TF +NRL
Sbjct: 296 VNARQVSATVTTNNPNDPCMIPKPVVDSGTYKWARSLFNSTDGFPQMGTFWSNRLCVMRD 355
Query: 349 KGDELSVYLSSFGAFYDF-SLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGC 407
+ +SV F +F + D + D A+ + + + WM + +LVG
Sbjct: 356 RWIAMSVSAD----FENFKTKDADQQTDD--SAIVQQLNARRLNKLAWMVE-SDSLLVGM 408
Query: 408 DTSLWLL-----SISLSKGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIK-YISG 461
W++ S++LS ++ RR + G PV VG ++FV GR+++ +
Sbjct: 409 TGDEWVIGKSNASLALS-ATNMSARRRTSYGSKRLQPVEVGGTILFVQKAGRKLRDFKYD 467
Query: 462 STEQGFRFNEITQLADHLFNQR------ILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCR 515
+ + ++T++ADH+ R I+ L YQ+EPHSIVW + +L+GC
Sbjct: 468 FSSDNYVSTDVTKIADHVTRGRSGTNSGIMSLCYQQEPHSIVWAA-----RADGQLIGCT 522
Query: 516 FSAE-GEGD-FAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLV 557
+ E G D + WH H + +V AS P + LWM+V
Sbjct: 523 YDEEAGRSDVYGWHRHPDVNG-FVECVASMPAPDGASDDLWMIV 565
>gi|221201505|ref|ZP_03574544.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
gi|221207939|ref|ZP_03580945.1| hypothetical protein BURMUCGD2_2474 [Burkholderia multivorans CGD2]
gi|221172124|gb|EEE04565.1| hypothetical protein BURMUCGD2_2474 [Burkholderia multivorans CGD2]
gi|221178773|gb|EEE11181.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
Length = 767
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 137/597 (22%), Positives = 230/597 (38%), Gaps = 89/597 (14%)
Query: 10 SFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNRV 69
SF AGELSP LL +R D++ + G N I GP V + + + +
Sbjct: 10 SFDAGELSP-LLGARVDIAKYPNGCKVMENFIATVQGPAVRRGGKRFVAAVKDSSKQAWL 68
Query: 70 FSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKD--NKSLEYAVFG 127
F + DG +L FGD ++ V R + A TPY D + +A+
Sbjct: 69 LPFIVSDGIAYMLEFGDHYIRFYVDRG--QLVNAGGPVEIATPYALADLVTEDGTFAIRA 126
Query: 128 S----TAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSIS 183
+ T H +PP LL +F+ ++ F+ P+ GV A
Sbjct: 127 TQSADTMYLFHGAYPPQKLLRTS---ATTFSLQQVTFVSGPFQTINSDEGVTVKAS---- 179
Query: 184 QADTSTARITSDMKIFKPLDKGRSIRLGCHP-----PEWAKNTNYSIGAYIVADDKVYRS 238
T +T+ +F D G L + P T G D+ Y S
Sbjct: 180 -GQTGAVTLTATAPVFSQADVGALFYLEQNDNTSVLPWSVHGTILETGLVRRVGDRTYVS 238
Query: 239 LTTGRSGDRFGYSKGATYVK----DNNIT--------------------WITVLNLSSKT 274
G + + S+ T+ + D ++T + TVL ++S +
Sbjct: 239 TAIGPTAPQVTGSETPTHTRGRRYDGDLTDLANDNYGTIGIEWEYQHSGYATVL-ITSVS 297
Query: 275 SRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPS 334
+ A+G V + + + PQS + G W + + +GYP
Sbjct: 298 DSQHATGTV-----------TTNNPTDPCIIPQS--IVDTGT--YKWAHALFNAADGYPQ 342
Query: 335 HVTFHNNRLLFSGSKGDELSVYLSSFGAFYDF-SLDGEYGCYDPTKALTTAVTDFSASTI 393
TF NRL + SV F +F S D + D A+ + + +
Sbjct: 343 MGTFWRNRLWMMRDRWLVGSVSAD----FENFASKDADQQTDD--SAIVQQLNARQLNKL 396
Query: 394 HWMHPFGEGVLVGCDTSLWLLSISLSK----GLSIDFRRVSGSGVYACPPVSVGDCLVFV 449
WM + +++G W++ + + +++ R + G PV VG ++FV
Sbjct: 397 AWMVE-SDSLIIGMTGDEWVIGPANASQPVSATNLNAARRTSYGSKRIQPVQVGGTIMFV 455
Query: 450 CGVGRRIK-YISGSTEQGFRFNEITQLADHLF------NQRILQLVYQEEPHSIVWVVLE 502
GR+++ + + F ++T+LADH+ N I+ L +Q+EPHSIVW
Sbjct: 456 QKAGRKLRDFKYDFSSDNFVSTDVTKLADHITRGRSGTNNGIMSLCFQQEPHSIVWAA-- 513
Query: 503 PKDNSFPRLLGCRFSAE-GEGD-FAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLV 557
+ +L+GC + E G D + WH H ++ +V AS P + LW++V
Sbjct: 514 ---RADGQLIGCTYDEEAGRSDVYGWHRHPDANG-FVECVASMPAPDGASDDLWLIV 566
>gi|288959382|ref|YP_003449723.1| hypothetical protein AZL_025410 [Azospirillum sp. B510]
gi|288911690|dbj|BAI73179.1| hypothetical protein AZL_025410 [Azospirillum sp. B510]
Length = 665
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 122/277 (44%), Gaps = 20/277 (7%)
Query: 288 VWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEG-YPSHVTFHNNRLLFS 346
VWG + ++ G SV + + + W + AWG G +P+ VTFH NRL F+
Sbjct: 202 VWGWCR-ITAFGSVTSVTATVEAAWGGTTATAFWRLGAWGATTGTWPTAVTFHENRLAFA 260
Query: 347 GSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMH-PFGEGVLV 405
+ +V+LS G F +F E G A+T D + I W+ FG +
Sbjct: 261 ALQ----TVWLSCSGDFDNFGPTTENGTVAADNAITLTAADDQVNVIRWLRSAFGVLIAG 316
Query: 406 GCDTSLWLLSISLSKGLS---IDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGS 462
+ + SL + L+ RV +G PV V LVF RR+ ++
Sbjct: 317 TSGGPFAIQASSLREALTPINATMPRVHVAGAADVQPVRVATNLVFPSRSRRRLHLLNAE 376
Query: 463 -TEQGFRFNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGE 521
G+ ++ +A H+ + + YQ+EP S++W+VL+ D + L G + E +
Sbjct: 377 FAAAGYSAPDLALVASHITRHAVKAMAYQQEPWSVMWLVLD--DGT---LAGVTYVPELD 431
Query: 522 GDFAWHTHMISDKHY-VLSAASFPNDNRGGTSLWMLV 557
AWH H + VLS A P +R LW++V
Sbjct: 432 -ILAWHRHPLGGTAVKVLSVACIPAADR--DELWLVV 465
>gi|262043557|ref|ZP_06016670.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039091|gb|EEW40249.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 511
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 117/492 (23%), Positives = 200/492 (40%), Gaps = 37/492 (7%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDP 64
+W + SFS GE++P L R D++ + + K N I +YG + + P Q +
Sbjct: 4 SWIQPSFSGGEIAPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTQFIAAAKYPD 62
Query: 65 RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYA 124
R R+ F L FG ++ V+ + TPYT D L++
Sbjct: 63 RKCRLIPFQFSTVQTYALEFGHNYMR-VIKDGGLVLTTGDVIYELATPYTENDVFGLKFT 121
Query: 125 VFGSTAVFVHKDHPPHHLL-YIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSIS 183
VH +PP L Y D +I +++ P+ + +K +
Sbjct: 122 QSADVMTIVHPSYPPKELRRYAHDNWQIV----DVQTTNGPFEDINV-----DESKTVWA 172
Query: 184 QADTSTARITSDMKIFKPLDKGRSIRLGCHP-----PEWAKNTNYSIGAYIVADDKVYRS 238
A T T +TS IF G+ L P P W + + SI AD YR+
Sbjct: 173 SAPTGTITLTSSSAIFGAEQVGKLFYLE-QPAVDSVPVWETSKSTSIEDIRRADSNYYRA 231
Query: 239 LTTGRSGD-RFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSK 297
T G++G R +++G + S G V V GD +
Sbjct: 232 NTAGKTGTLRPSHTEGMAWDGWGGTG--DDDTGVQWEYLHSGFGIVRITAVAGDGLTATA 289
Query: 298 DGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYL 357
D +S P++ + A + W AW GYP+ V ++ RL F+ S +++
Sbjct: 290 D--VVSRIPEN--VVGADKASYKWARYAWNSVNGYPATVVYYQQRLYFAASPAYPQTIWA 345
Query: 358 SSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM-HPFGEGVLVGCDT-SLWLLS 415
S G + DF G +PT+ V ++ ++ + H G LV + ++++
Sbjct: 346 SRTGDYKDF------GKSNPTQDDDRIVYTYAGRQVNEIRHLIDVGSLVVLTSGGEFVVT 399
Query: 416 ISLSKGLSIDFRRVSGSGVYAC---PPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNE 471
+K L+ +S G C PP++V + +F+ G ++ ++ S + GF+ N+
Sbjct: 400 GDQNKVLTPSAFSLSSQGSNGCSDVPPIAVSNIALFIQEKGSVVRDLAYSFDVDGFQGND 459
Query: 472 ITQLADHLFNQR 483
+T LA+HLF +R
Sbjct: 460 LTILANHLFQKR 471
>gi|218886166|ref|YP_002435487.1| hypothetical protein DvMF_1065 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757120|gb|ACL08019.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 692
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 21/250 (8%)
Query: 332 YPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSAS 391
YPS V F RL F+GS+ +++ S G + + + D A+T + + S
Sbjct: 274 YPSSVQFWQQRLCFAGSRSHPQTIWASRTGCYENMDVSRPLQTDD---AVTVTIASETVS 330
Query: 392 TIHWMHPFGEGVLVGCDTSLWLLSISLSKGLS-----IDFRRVSGSGVYACPPVSVGDCL 446
+ WM P +LVG W LS S+ S ++F+ GS PP++VGD +
Sbjct: 331 AVRWMMP-ARKLLVGTGGGEWTLSGQGSEPFSPLSCLLEFQSARGSA--ELPPLAVGDGV 387
Query: 447 VFVCGVGRRIKYISGSTE-QGFRFNEITQLADHLFNQR-ILQLVYQEEPHSIVWVVLEPK 504
+ V GR ++ S + G+ + T LA+H+ R I+ YQ+ PHS+VW ++
Sbjct: 388 LAVQRGGRAVRDFRYSLDVDGYSGADQTILAEHMLRGRNIVDWAYQQSPHSVVWCAMD-- 445
Query: 505 DNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAA-SFPNDNRGGTSLWMLVALSA-G 562
D + + G AE + WH H L P+D GG LW++V G
Sbjct: 446 DGT---MAGLTLIAEHQ-VAGWHRHDTGGAVEALCVVPGPPSDPAGGDELWLVVRRDVDG 501
Query: 563 EERSFTVRLN 572
+R + RL+
Sbjct: 502 VQRRYIERLD 511
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M TT ++SF+AGELSP L+ +R D + +A G RN++ +GP P ++ C
Sbjct: 1 MARTTLIQNSFNAGELSP-LMAARGDQARYASGCRVLRNMLLHPHGPAFRRPGLRFMGAC 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQI 91
+ R+ F +G +L F ++L++
Sbjct: 60 VDETVPPRLVPFVFNEGQAYVLEFAPERLRV 90
>gi|301046400|ref|ZP_07193560.1| conserved domain protein [Escherichia coli MS 185-1]
gi|300301626|gb|EFJ58011.1| conserved domain protein [Escherichia coli MS 185-1]
Length = 821
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 121/526 (23%), Positives = 219/526 (41%), Gaps = 72/526 (13%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQ-------EY 57
+W + SF+ GE+ P L R D++ + + K N I +YG + + P +
Sbjct: 4 SWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPN 62
Query: 58 RDCRLDP-RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFK 116
R CRL P + + V ++++ G + V D L V+ S+ + A TPYT
Sbjct: 63 RKCRLIPFQFSTVQTYALEFGHQYMRVIKDGAL--VLNSSNVIYEIA-------TPYTEA 113
Query: 117 DNKSLEYAVFGSTAVFVHKDHPPHHLL-YIQDGDKISFTFDEIKFLPPPWLGDGMISGVK 175
D +++ VH +PP L Y D ++ + +G +
Sbjct: 114 DLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTK----------NGPFEDIN 163
Query: 176 SNAKLSI-SQADTSTARITSDMKIFKPLDKGRSIRLGCHP-----PEWAKNTNYSIGAYI 229
+ +++ + A T T +T+ IF G+ L P P W + + SIG
Sbjct: 164 IDESVTVYASASTGTITLTASASIFGAEQVGKLFYLE-QPAVDSVPVWETSKSTSIGDIR 222
Query: 230 VADDKVYRSLTTGRSGD-RFGYSKGATYVKD-------NNITWITVLNLSSKTSRESASG 281
AD YR++T G++G R +++G ++ I W + + +A+G
Sbjct: 223 RADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARISAANG 282
Query: 282 AVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNN 341
A V IS P SQ + + S W AW GYP V ++
Sbjct: 283 TTATAEV-------------ISYIP-SQVVGEDNASY-KWAKYAWNSINGYPGTVVYYQQ 327
Query: 342 RLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM-HPFG 400
RL F+ S +++ S G + DF G +PT+ + ++ ++ + H
Sbjct: 328 RLYFAASTAFPQTIWASRTGDYKDF------GKSNPTQDDDRIIYTYAGRQVNEIRHLID 381
Query: 401 EGVLVGCDT-SLWLLSISLSKGL---SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRI 456
G LV + ++++ +K L S F +G PP++V + +FV G +
Sbjct: 382 VGSLVALTSGGEYVITGDQNKALTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVV 441
Query: 457 KYISGSTE-QGFRFNEITQLADHLFNQR-ILQLVYQEEPHSIVWVV 500
+ ++ S + G++ N++T LA+HLF + I+ + P+S + +
Sbjct: 442 RDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCI 487
>gi|89152436|ref|YP_512269.1| hypothetical protein PhiV10p15 [Escherichia phage phiV10]
gi|74055459|gb|AAZ95908.1| hypothetical protein PhiV10p15 [Escherichia phage phiV10]
Length = 823
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 121/526 (23%), Positives = 219/526 (41%), Gaps = 72/526 (13%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQ-------EY 57
+W + SF+ GE+ P L R D++ + + K N I +YG + + P +
Sbjct: 4 SWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPN 62
Query: 58 RDCRLDP-RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFK 116
R CRL P + + V ++++ G + V D L V+ S+ + A TPYT
Sbjct: 63 RKCRLIPFQFSTVQTYALEFGHQYMRVIKDGAL--VLNSSNVIYEIA-------TPYTEA 113
Query: 117 DNKSLEYAVFGSTAVFVHKDHPPHHLL-YIQDGDKISFTFDEIKFLPPPWLGDGMISGVK 175
D +++ VH +PP L Y D ++ + +G +
Sbjct: 114 DLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTK----------NGPFEDIN 163
Query: 176 SNAKLSI-SQADTSTARITSDMKIFKPLDKGRSIRLGCHP-----PEWAKNTNYSIGAYI 229
+ L++ + A T T +T+ IF G+ L P P W + + SIG
Sbjct: 164 IDESLTVYASASTGTITLTASASIFGAEQVGKLFYLE-QPAVDSVPVWETSKSTSIGDIR 222
Query: 230 VADDKVYRSLTTGRSGD-RFGYSKGATYVKD-------NNITWITVLNLSSKTSRESASG 281
AD YR++T G++G R +++G ++ I W L+ +R +A
Sbjct: 223 RADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEW-EYLHSGFGIARITA-- 279
Query: 282 AVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNN 341
+ + IS P SQ + + S W AW GYP V ++
Sbjct: 280 ----------VNGTTATAEVISYIP-SQVVGEDNASY-KWAKYAWNSVNGYPGTVVYYQQ 327
Query: 342 RLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM-HPFG 400
RL F+ S +++ S G + DF G +PT+ + ++ ++ + H
Sbjct: 328 RLYFAASTAFPQTIWASRTGDYKDF------GKSNPTQDDDRIIYTYAGRQVNEIRHLID 381
Query: 401 EGVLVGCDT-SLWLLSISLSKGL---SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRI 456
G LV + ++++ +K L S F +G PP++V + +FV G +
Sbjct: 382 VGSLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVV 441
Query: 457 KYISGSTE-QGFRFNEITQLADHLFNQR-ILQLVYQEEPHSIVWVV 500
+ ++ S + G++ N++T LA+HLF + I+ + P+S + +
Sbjct: 442 RDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCI 487
>gi|187736306|ref|YP_001878418.1| hypothetical protein Amuc_1819 [Akkermansia muciniphila ATCC
BAA-835]
gi|187426358|gb|ACD05637.1| hypothetical protein Amuc_1819 [Akkermansia muciniphila ATCC
BAA-835]
Length = 822
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 112/254 (44%), Gaps = 18/254 (7%)
Query: 321 WFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKA 380
W A+G + GYP V FH RL F G+ G +++ S F F+ D
Sbjct: 413 WSFGAFGVRNGYPCTVEFHQGRLWFGGTPGQPQTLWASRVDDFSAFTPGIP---ADSPMI 469
Query: 381 LTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGLSID---FRRVSGSGVYAC 437
LT A + + I W+ G+++G W LS + S+GL+ F R SG G +
Sbjct: 470 LTMAAS--QQNRISWIASL-RGLMIGTSEGEWRLSATNSEGLNASNAGFERHSGVGSASL 526
Query: 438 PPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLADHLFNQRILQLVYQEEPHSI 496
+SV + L+FV G +++ + S E G++ +++ L+DHL + I+ Q
Sbjct: 527 DALSVENSLLFVQQGGMKVRELFYSLEADGYQTRDVSLLSDHLLGEGIVDWTVQRSTAFH 586
Query: 497 VWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPND-NRGGTSLWM 555
VW VL D S C + AWH H + + +LS AS N +W
Sbjct: 587 VWCVL--GDGSAV----CMTLNREQNVVAWHAHRL-EHGRILSVASLRGSRNTPDEEVWF 639
Query: 556 LVALSAGEERSFTV 569
VA GEE TV
Sbjct: 640 AVARGEGEEACITV 653
>gi|327252176|gb|EGE63848.1| phage protein [Escherichia coli STEC_7v]
Length = 823
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 121/526 (23%), Positives = 219/526 (41%), Gaps = 72/526 (13%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQ-------EY 57
+W + SF+ GE+ P L R D++ + + K N I +YG + + P +
Sbjct: 4 SWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPN 62
Query: 58 RDCRLDP-RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFK 116
R CRL P + + V ++++ G + V D L V+ S+ + A TPYT
Sbjct: 63 RKCRLIPFQFSTVQTYALEFGHQYMRVIKDGAL--VLNSSNVIYEIA-------TPYTEA 113
Query: 117 DNKSLEYAVFGSTAVFVHKDHPPHHLL-YIQDGDKISFTFDEIKFLPPPWLGDGMISGVK 175
D +++ VH +PP L Y D ++ + +G +
Sbjct: 114 DLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTK----------NGPFEDIN 163
Query: 176 SNAKLSI-SQADTSTARITSDMKIFKPLDKGRSIRLGCHP-----PEWAKNTNYSIGAYI 229
+ +++ + A T T +T+ IF G+ L P P W + + SIG
Sbjct: 164 IDESVTVYASASTGTITLTASASIFGAEQVGKLFYLE-QPAVDSVPVWETSKSTSIGDIR 222
Query: 230 VADDKVYRSLTTGRSGD-RFGYSKGATYVKD-------NNITWITVLNLSSKTSRESASG 281
AD YR++T G++G R +++G ++ I W + + +A+G
Sbjct: 223 RADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARISAANG 282
Query: 282 AVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNN 341
A V IS P SQ + + S W AW GYP V ++
Sbjct: 283 TTATAEV-------------ISYIP-SQVVGEDNASY-KWAKYAWNSVNGYPGTVVYYQQ 327
Query: 342 RLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM-HPFG 400
RL F+ S +++ S G + DF G +PT+ + ++ ++ + H
Sbjct: 328 RLYFAASTAFPQTIWASRTGDYKDF------GKSNPTQDDDRIIYTYAGRQVNEIRHLID 381
Query: 401 EGVLVGCDT-SLWLLSISLSKGL---SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRI 456
G LV + ++++ +K L S F +G PP++V + +FV G +
Sbjct: 382 VGSLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVV 441
Query: 457 KYISGSTE-QGFRFNEITQLADHLFNQR-ILQLVYQEEPHSIVWVV 500
+ ++ S + G++ N++T LA+HLF + I+ + P+S + +
Sbjct: 442 RDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCI 487
>gi|323156125|gb|EFZ42284.1| phage protein [Escherichia coli EPECa14]
Length = 823
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 121/526 (23%), Positives = 219/526 (41%), Gaps = 72/526 (13%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQ-------EY 57
+W SF+ GE+ P L R D++ + + K N I +YG + + P +
Sbjct: 4 SWIHPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPN 62
Query: 58 RDCRLDP-RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFK 116
R CRL P + + V ++++ G + V D L V+ S+ + A TPYT
Sbjct: 63 RKCRLIPFQFSTVQTYALEFGHQYMRVIKDGAL--VLNSSNVIYEIA-------TPYTEA 113
Query: 117 DNKSLEYAVFGSTAVFVHKDHPPHHLL-YIQDGDKISFTFDEIKFLPPPWLGDGMISGVK 175
D +++ VH +PP L Y D ++ + +G +
Sbjct: 114 DLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTK----------NGPFEDIN 163
Query: 176 SNAKLSI-SQADTSTARITSDMKIFKPLDKGRSIRLGCHP-----PEWAKNTNYSIGAYI 229
+ +++ + A T T +T++ IF G+ L P P W + + SIG
Sbjct: 164 IDESVTVYASASTGTITLTANASIFGAEQVGKLFYLE-QPAVDSVPVWETSKSTSIGDIR 222
Query: 230 VADDKVYRSLTTGRSGD-RFGYSKGATYVKD-------NNITWITVLNLSSKTSRESASG 281
AD YR++T G++G R +++G ++ I W + + +A+G
Sbjct: 223 RADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARISAANG 282
Query: 282 AVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNN 341
A V IS P SQ + + S W AW GYP V ++
Sbjct: 283 TTATAEV-------------ISYIP-SQVVGEDNASY-KWAKYAWNSVNGYPGTVVYYQQ 327
Query: 342 RLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM-HPFG 400
RL F+ S +++ S G + DF G +PT+ + ++ ++ + H
Sbjct: 328 RLYFAASTAFPQTIWASRTGDYKDF------GKSNPTQDDDRIIYTYAGRQVNEIRHLID 381
Query: 401 EGVLVGCDT-SLWLLSISLSKGL---SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRI 456
G LV + ++++ +K L S F +G PP++V + +FV G +
Sbjct: 382 VGSLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVV 441
Query: 457 KYISGSTE-QGFRFNEITQLADHLFNQR-ILQLVYQEEPHSIVWVV 500
+ ++ S + G++ N++T LA+HLF + I+ + P+S + +
Sbjct: 442 RDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCI 487
>gi|332344346|gb|AEE57680.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 823
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 121/526 (23%), Positives = 219/526 (41%), Gaps = 72/526 (13%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQ-------EY 57
+W + SF+ GE+ P L R D++ + + K N I +YG + + P +
Sbjct: 4 SWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPN 62
Query: 58 RDCRLDP-RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFK 116
R CRL P + + V ++++ G + V D L V+ S+ + A TPYT
Sbjct: 63 RKCRLIPFQFSTVQTYALEFGHQYMRVIKDGAL--VLNSSNVIYEIA-------TPYTEA 113
Query: 117 DNKSLEYAVFGSTAVFVHKDHPPHHLL-YIQDGDKISFTFDEIKFLPPPWLGDGMISGVK 175
D +++ VH +PP L Y D ++ + +G +
Sbjct: 114 DLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTK----------NGPFEDIN 163
Query: 176 SNAKLSI-SQADTSTARITSDMKIFKPLDKGRSIRLGCHP-----PEWAKNTNYSIGAYI 229
+ +++ + A T T +T+ IF G+ L P P W + + SIG
Sbjct: 164 IDESVTVYASASTGTITLTASASIFGAEQVGKLFYLE-QPAVDSVPVWETSKSTSIGDIR 222
Query: 230 VADDKVYRSLTTGRSGD-RFGYSKGATYVKD-------NNITWITVLNLSSKTSRESASG 281
AD YR++T G++G R +++G ++ I W + + +A+G
Sbjct: 223 RADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARISAANG 282
Query: 282 AVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNN 341
A V IS P SQ + + S W AW GYP V ++
Sbjct: 283 TTATAEV-------------ISYIP-SQVVGEDNASY-KWAKYAWDSINGYPGTVVYYQQ 327
Query: 342 RLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM-HPFG 400
RL F+ S +++ S G + DF G +PT+ + ++ ++ + H
Sbjct: 328 RLYFAASTAFPQTIWASRTGDYKDF------GKSNPTQDDDRIIYTYAGRQVNEIRHLID 381
Query: 401 EGVLVGCDT-SLWLLSISLSKGL---SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRI 456
G LV + ++++ +K L S F +G PP++V + +FV G +
Sbjct: 382 VGSLVALTSGGEYVITGDQNKVLAPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVV 441
Query: 457 KYISGSTE-QGFRFNEITQLADHLFNQR-ILQLVYQEEPHSIVWVV 500
+ ++ S + G++ N++T LA+HLF + I+ + P+S + +
Sbjct: 442 RDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCI 487
>gi|294493191|gb|ADE91947.1| conserved hypothetical protein [Escherichia coli IHE3034]
Length = 823
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 120/526 (22%), Positives = 219/526 (41%), Gaps = 72/526 (13%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQ-------EY 57
+W + SF+ GE+ P L R D++ + + K N I +YG + + P +
Sbjct: 4 SWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPN 62
Query: 58 RDCRLDP-RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFK 116
R CRL P + + V ++++ G + V D L V+ S+ + A TPYT
Sbjct: 63 RKCRLIPFQFSTVQTYALEFGHQYMRVIKDGAL--VLNSSNVIYEIA-------TPYTEA 113
Query: 117 DNKSLEYAVFGSTAVFVHKDHPPHHLL-YIQDGDKISFTFDEIKFLPPPWLGDGMISGVK 175
D +++ VH +PP L Y D ++ + +G +
Sbjct: 114 DLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTK----------NGPFEDIN 163
Query: 176 SNAKLSI-SQADTSTARITSDMKIFKPLDKGRSIRLGCHP-----PEWAKNTNYSIGAYI 229
+ +++ + A T T +T+ IF G+ L P P W + + SIG
Sbjct: 164 IDESVTVYASASTGTITLTASASIFGAEQVGKLFYLE-QPAVDSVPVWETSKSTSIGDIR 222
Query: 230 VADDKVYRSLTTGRSGD-RFGYSKGATYVKD-------NNITWITVLNLSSKTSRESASG 281
AD YR++T G++G R +++G ++ I W L+ +R +A
Sbjct: 223 RADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEW-EYLHSGFGIARITA-- 279
Query: 282 AVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNN 341
+ + IS P SQ + + S W AW GYP V ++
Sbjct: 280 ----------VNGTTATAEVISYIP-SQVVGEDNASY-KWAKYAWNSVNGYPGTVVYYQQ 327
Query: 342 RLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM-HPFG 400
RL F+ S +++ S G + DF G +PT+ + ++ ++ + H
Sbjct: 328 RLYFAASTAFPQTIWASRTGDYKDF------GKSNPTQDDDRIIYTYAGRQVNEIRHLID 381
Query: 401 EGVLVGCDT-SLWLLSISLSKGL---SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRI 456
G LV + ++++ +K L S F +G PP++V + +FV G +
Sbjct: 382 VGSLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVV 441
Query: 457 KYISGSTE-QGFRFNEITQLADHLFNQR-ILQLVYQEEPHSIVWVV 500
+ ++ S + G++ N++T LA+HLF + I+ + P+S + +
Sbjct: 442 RDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCI 487
>gi|300898435|ref|ZP_07116776.1| conserved domain protein [Escherichia coli MS 198-1]
gi|300357902|gb|EFJ73772.1| conserved domain protein [Escherichia coli MS 198-1]
Length = 823
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 119/526 (22%), Positives = 219/526 (41%), Gaps = 72/526 (13%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQ-------EY 57
+W + SF+ GE+ P L R D++ + + K N I +YG + + P +
Sbjct: 4 SWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPN 62
Query: 58 RDCRLDP-RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFK 116
R CRL P + + V ++++ G + V D L V+ S+ + A TPYT
Sbjct: 63 RKCRLIPFQFSTVQTYALEFGHQYMRVIKDGAL--VLNSSNVIYEIA-------TPYTEA 113
Query: 117 DNKSLEYAVFGSTAVFVHKDHPPHHLL-YIQDGDKISFTFDEIKFLPPPWLGDGMISGVK 175
D +++ VH +PP L Y D ++ + +G +
Sbjct: 114 DLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTK----------NGPFEDIN 163
Query: 176 SNAKLSI-SQADTSTARITSDMKIFKPLDKGRSIRLGCHP-----PEWAKNTNYSIGAYI 229
+ +++ + A T T +T+ IF G+ L P P W + + SIG
Sbjct: 164 IDESVTVYASASTGTITLTASASIFGAEQVGKLFYLE-QPAVDSVPVWETSKSTSIGDIR 222
Query: 230 VADDKVYRSLTTGRSGD-RFGYSKGATYVKD-------NNITWITVLNLSSKTSRESASG 281
AD YR++T G++G R +++G ++ I W L+ +R +A
Sbjct: 223 RADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEW-EYLHSGFGIARITA-- 279
Query: 282 AVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNN 341
+ + IS P SQ + + S W AW GYP V ++
Sbjct: 280 ----------VNGTTATAEVISYIP-SQVVGEDNASY-KWAKYAWNSVNGYPGTVVYYQQ 327
Query: 342 RLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM-HPFG 400
RL F+ S +++ S G + DF G +PT+ + ++ ++ + H
Sbjct: 328 RLYFAASTAFPQTIWASRTGDYKDF------GKSNPTQDDDRIIYTYAGRQVNEIRHLID 381
Query: 401 EGVLVGCDT-SLWLLSISLSKGL---SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRI 456
G LV + ++++ +K L S F +G PP++V + +FV G +
Sbjct: 382 VGSLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVV 441
Query: 457 KYISGSTE-QGFRFNEITQLADHLFNQR-ILQLVYQEEPHSIVWVV 500
+ ++ S + G++ +++T LA+HLF + I+ + P+S + +
Sbjct: 442 RDLAYSFDVDGYQGSDLTILANHLFQKHSIVDWCFSIVPYSSAFCI 487
>gi|46580124|ref|YP_010932.1| hypothetical protein DVU1714 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46449540|gb|AAS96191.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233883|gb|ADP86737.1| hypothetical protein Deval_1582 [Desulfovibrio vulgaris RCH1]
Length = 697
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 140/589 (23%), Positives = 223/589 (37%), Gaps = 109/589 (18%)
Query: 8 KHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMP---LMQEYRDCRLDP 64
+ +F+ GE+SP LL +R D + G RN +PL GP+ P M ++ P
Sbjct: 8 QQAFNGGEISP-LLTARADQIRYQTGALTMRNAVPLAQGPVTRRPGLRFMGAAKEQGAGP 66
Query: 65 RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALF----GKTYK--TPYTFKDN 118
R+ SF L FG +++ W A G+ Y+ +PY D
Sbjct: 67 --VRLVSFVFSAAQSRALEFGPGYVRV--------WMDAGLVSKNGQPYEVASPYGAADI 116
Query: 119 KSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLP----PPWLGDGMISGV 174
L +A ++HPP L D D + F F+P P L G +
Sbjct: 117 AGLRFAQSADVIYIASRNHPPRKLSRHADDD---WRFITPTFMPTQAAPGALTLGTLGTT 173
Query: 175 KSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDK 234
+ S T+ + T + + P +G W + + ++ + + +
Sbjct: 174 PGPGNETYSYKVTAVSATTGEESLASP--EGTITTTAMSSTYWVRVSWAAVPGAV--EYR 229
Query: 235 VYRSLTTGRSGDRFGY----SKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWG 290
VY+ R FG+ G T+ D NI GA
Sbjct: 230 VYK-----RRYGVFGFIGRAVGGDTFFDDRNI------------------GA-------- 258
Query: 291 DIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKG 350
D +D P+++ F +A GE YP V F RL F+GS
Sbjct: 259 DTEDT---------VPEAKNPF-----------TAAGE---YPGLVFFWQQRLGFAGSDK 295
Query: 351 DELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVL-VGCDT 409
L+V+LS AF + + D +A + + W+ G+ L +G +
Sbjct: 296 RPLTVWLSQSAAFENLAASRPPQDDDGIEA---TLAGQRQNRFVWIE--GDRTLCLGTEG 350
Query: 410 SLWLLSISLSKGL---SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTEQ- 465
W LS + S+ F+ G P V GD L++V G ++ + S E+
Sbjct: 351 GEWTLSGQEGGPVTPTSLQFQSHGVRGSEGVPAVRAGDSLLYVQRGGGVVREFTYSFERD 410
Query: 466 GFRFNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGD-F 524
G+ ++T L L +++ YQ+ PHSIVW VL+ D + L R E D
Sbjct: 411 GYVAPDLTLLTGVLRGRKVRAWAYQQSPHSIVWCVLD--DGTLAALTFLR-----EHDVV 463
Query: 525 AWHTHMISDKHYVLSAASFPNDNRGGT-SLWMLVALS-AGEERSFTVRL 571
WH H ++ + GGT ++WMLV + G+ER + R+
Sbjct: 464 GWHRHDTDGVVEDVTVIPGGDATAGGTDTVWMLVRRTVGGQERRYVERM 512
>gi|242278913|ref|YP_002991042.1| hypothetical protein Desal_1441 [Desulfovibrio salexigens DSM 2638]
gi|242121807|gb|ACS79503.1| hypothetical protein Desal_1441 [Desulfovibrio salexigens DSM 2638]
Length = 698
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 115/250 (46%), Gaps = 33/250 (13%)
Query: 304 VAPQSQTLFQAGVSVVSWFMS---------AWGEQEGYPSHVTFHNNRLLFSGSKGDELS 354
V P+ Q + S V W M W ++G+PS VTF RL F+ S + +
Sbjct: 246 VHPEVQPYKLSRTSHVDWKMELVAFSSPPQEWNSEKGFPSCVTFFEERLCFAASPSNPQT 305
Query: 355 VYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLL 414
+++S G++ DF++ D A T ++ + I WM + +++G W
Sbjct: 306 IWMSKAGSYEDFAVSSPVVDDD---ACTYTLSADQVNAIRWMVS-AKKLIMGTSGGEWW- 360
Query: 415 SISLSKGLSID--------FRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-Q 465
LS G S+D RR + G A PPV VG ++F+ GR I+ +S S E
Sbjct: 361 ---LSGGSSLDSVTPNSVMVRRETTHGSAAIPPVVVGGVMLFLQREGRTIRELSYSFEAD 417
Query: 466 GFRFNEITQLADHLF-NQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDF 524
G+ ++T LA+HL + I + YQ+ P S++W+ +D+ ++G + E E
Sbjct: 418 GYTAPDLTILAEHLTRSNSITEWAYQQSPDSVIWMT---RDDGV--MVGLTYQREHE-VV 471
Query: 525 AWHTHMISDK 534
+H H K
Sbjct: 472 GFHRHTTDGK 481
>gi|30387391|ref|NP_848220.1| hypothetical protein epsilon15p12 [Enterobacteria phage epsilon15]
gi|30266046|gb|AAO06075.1| 12 [Salmonella phage epsilon15]
Length = 825
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 200/504 (39%), Gaps = 63/504 (12%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDP 64
+W + SF+ GE+ P L R D+S + + K N I +YG + + P + +
Sbjct: 4 SWIQPSFAGGEIGPSLY-GRIDMSKYQVALRKCDNFIVRQYGGVENRPGTRFVGPAKYPD 62
Query: 65 RSNRVFSFSIPDGGYALLVFGDKKLQI------VVVRSSTKWSPALFGKTYKTPYTFKDN 118
R R+ F L FG +++ V+ S+ + A+ PY D
Sbjct: 63 RKCRLIPFQFSTVQTYALEFGHNYMRVIKDGAYVLTTSNVIYELAM-------PYADTDL 115
Query: 119 KSLEYAVFGSTAVFVHKDHPPHHLL-YIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSN 177
+++ VH +PP L Y D +I ++ P+ + VK
Sbjct: 116 FRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQIV----DVTTKNGPFEDINVDETVKVY 171
Query: 178 AKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHP-----PEWAKNTNYSIGAYIVAD 232
A A T T +T+ IF G+ L P P W + +I AD
Sbjct: 172 AS-----ASTGTITLTASSAIFGAEQVGKLFYLE-QPAVDSVPVWETSKTTAINDVRRAD 225
Query: 233 DKVYRSLTTGRSGD-RFGYSKGATY-------VKDNNITWITVLNLSSKTSRESASGAVA 284
YR+ T+G++G R +++G ++ D I W + S G
Sbjct: 226 SNYYRANTSGKTGTLRPSHTEGMSWDGWGGTGSDDTGIQWEYL---------HSGFGIAK 276
Query: 285 PYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLL 344
V GD + D +S P SQ + A S W AW GYPS V ++ RL
Sbjct: 277 ITAVAGDGLTATAD--VVSFIP-SQVVGSANASY-KWAKYAWNSVNGYPSTVVYYQQRLY 332
Query: 345 FSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM-HPFGEGV 403
F+ S +++ S G + DF G +P + + ++ ++ + H G
Sbjct: 333 FAASTAYPQTIWASRTGDYKDF------GKNNPIQDDDRIIYTYAGRQVNEIRHLIDVGN 386
Query: 404 LVGCDT-SLWLLSISLSKGLS---IDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYI 459
LV + + +S +K L+ F +G PP++V + +F+ G ++ +
Sbjct: 387 LVALTSGGEYTISGDQNKVLTPSAFSFSSQGNNGSSNVPPIAVANIALFIQEKGSVVRDL 446
Query: 460 SGSTE-QGFRFNEITQLADHLFNQ 482
+ S + G++ ++T LA+HLF +
Sbjct: 447 AYSFDVDGYQGTDLTILANHLFQK 470
>gi|120601703|ref|YP_966103.1| hypothetical protein Dvul_0653 [Desulfovibrio vulgaris DP4]
gi|120561932|gb|ABM27676.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4]
Length = 699
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 130/574 (22%), Positives = 213/574 (37%), Gaps = 90/574 (15%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M T ++SF+AGELSP L+ +R D + + G A N++ +G P ++ +
Sbjct: 1 MARATIVRNSFNAGELSP-LMAARVDQARYPNGCASLCNMLLHPHGGAWRRPGLR-FMGL 58
Query: 61 RLDPRSN-RVFSFSIPDGGYALLVFGDKKLQI---VVVRSSTKWSPALFGKTYKTPYTFK 116
DP R+ F + +L FG + L+I + P +TP+ +
Sbjct: 59 AADPAGPVRLIPFVFSEAQAYVLEFGPRSLRIWHGGGLVLGGDGEPFRL----ETPWAGE 114
Query: 117 DNKSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLP---PPWLGDGMISG 173
+L + V PP L D + ++ FLP PP +G+
Sbjct: 115 QLTALRWCQSADMLYLVSHAGPPRRLERHGHAD---WRLVDVSFLPGVSPP---EGLHCT 168
Query: 174 VKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADD 233
VK + + T+ R + + + P + P ++ + ++ V D
Sbjct: 169 VKPAGSRTWTYVVTAVHRESGEESLPTPPLQVTG------PDALSQTASVTLAWTPVQDA 222
Query: 234 KVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIK 293
YR G +G+ A GA Y G
Sbjct: 223 GEYRVYRAGGGASVYGFLGSA--------------------------GAGETYTDTGRTP 256
Query: 294 DVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDEL 353
D P+++ F GE + +PS F RL F+G++
Sbjct: 257 DFDAG------PPEARNPFS-------------GEGD-WPSCAVFWQQRLCFAGTRNGPQ 296
Query: 354 SVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWL 413
+++ S GA+ +FS+ D A+T + + S + W+ P +LVG W
Sbjct: 297 TIWASRSGAYGNFSVSRPLRDDD---AVTVTIAADTVSAVRWLMP-ARRLLVGTGGGEWT 352
Query: 414 LSISLSK---GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRF 469
LS + LS R S G P+SVGD ++ + GR ++ S + G+
Sbjct: 353 LSGQGEQPFSPLSCSLERQSSRGSGDVQPLSVGDAVLALQRGGRVVREFRYSLDVDGYAG 412
Query: 470 NEITQLADHLF-NQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHT 528
++T LA+HL +RI+ +Q+ P VW V E L+ E E WH
Sbjct: 413 TDLTILAEHLTRGRRIIDWAWQQSPSGTVWCVTEDGG-----LIAMTRIPEHE-VAGWHR 466
Query: 529 HMISDKHYVLSAASFPNDNRGGTSLWMLVALSAG 562
H+ VLS + P G LW+ V G
Sbjct: 467 HVTDGA--VLSVCTIPGT--AGDELWVAVRREGG 496
>gi|215487813|ref|YP_002330244.1| hypothetical protein E2348C_2746 [Escherichia coli O127:H6 str.
E2348/69]
gi|215265885|emb|CAS10294.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
Length = 825
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 199/504 (39%), Gaps = 63/504 (12%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDP 64
+W + SF+ GE+ P L R D+S + + K N I +YG + + P + +
Sbjct: 4 SWIQPSFAGGEIGPSLY-GRIDMSKYQVALRKCDNFIVRQYGGVENRPGTRFVGPAKYPD 62
Query: 65 RSNRVFSFSIPDGGYALLVFGDKKLQI------VVVRSSTKWSPALFGKTYKTPYTFKDN 118
R R+ F L FG +++ V+ S+ + A+ PY D
Sbjct: 63 RKCRLIPFQFSTVQTYALEFGHNYMRVIKDGEYVLTTSNVIYELAM-------PYADTDL 115
Query: 119 KSLEYAVFGSTAVFVHKDHPPHHLL-YIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSN 177
+++ VH +PP L Y D +I ++ P+ + VK
Sbjct: 116 FRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQIV----DVTTKNGPFEDINVDDTVKVY 171
Query: 178 AKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHP-----PEWAKNTNYSIGAYIVAD 232
A A T T +T+ IF G+ L P P W + +I AD
Sbjct: 172 AS-----ASTGTITLTASSAIFGAEQVGKLFYLE-QPAVDSVPVWETSKTTAINDVRRAD 225
Query: 233 DKVYRSLTTGRSGD-RFGYSKGATY-------VKDNNITWITVLNLSSKTSRESASGAVA 284
YR+ T G++G R +++G ++ D I W + S G
Sbjct: 226 SNYYRANTAGKTGTLRPSHTEGMSWDGWGGTGSDDTGIQWEYL---------HSGFGIAK 276
Query: 285 PYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLL 344
V GD + D +S P SQ + A S W AW GYPS V ++ RL
Sbjct: 277 ITAVSGDGLTATAD--VVSFIP-SQVVGSANASY-KWAKYAWNSVNGYPSTVVYYQQRLY 332
Query: 345 FSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM-HPFGEGV 403
F+ S +++ S G + DF G +P + + ++ ++ + H G
Sbjct: 333 FAASTAYPQTIWASRTGDYKDF------GKNNPIQDDDRIIYTYAGRQVNEIRHLIDVGN 386
Query: 404 LVGCDT-SLWLLSISLSKGLS---IDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYI 459
LV + + +S +K L+ F +G PP++V + +F+ G ++ +
Sbjct: 387 LVALTSGGEYTISGDQNKVLTPSAFSFSSQGNNGSSNVPPIAVANIALFIQEKGSVVRDL 446
Query: 460 SGSTE-QGFRFNEITQLADHLFNQ 482
+ S + G++ ++T LA+HLF +
Sbjct: 447 AYSFDVDGYQGTDLTILANHLFQK 470
>gi|292670776|ref|ZP_06604202.1| hypothetical protein HMPREF7545_1740 [Selenomonas noxia ATCC 43541]
gi|292647397|gb|EFF65369.1| hypothetical protein HMPREF7545_1740 [Selenomonas noxia ATCC 43541]
Length = 762
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 110/220 (50%), Gaps = 22/220 (10%)
Query: 323 MSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALT 382
+SAW ++GYP V+F +RL+F+GS+ + + S G +Y+F ++ D A+T
Sbjct: 345 LSAWSAKKGYPQAVSFFEDRLVFAGSRAKPQTYWASQSGDYYNFWVNTPQQDSD---AIT 401
Query: 383 TAVTDFSASTIHWMHPFGEGVLVGCDTSLWL------LSISLSKGLSIDFRRVSGSGVYA 436
++ + I + PFGE +++ + + + K ++R G+
Sbjct: 402 GTLSGGQMNGIRAIIPFGEMLMLTSGGEYKVGGGNETFTPTNQKAEPQEYR-----GINN 456
Query: 437 CPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLADHLFN-QRILQLVYQEEPH 494
PV +G +V+V G I+ ++ S + + ++++ LA HLF I+ L YQ+ P+
Sbjct: 457 LTPVVIGGRIVYVQHQGSVIRDLTYSYDVDKYTGDDVSLLAAHLFEGHTIVALAYQQTPN 516
Query: 495 SIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDK 534
++VW V E D + LLG + E + +AWH H + K
Sbjct: 517 TVVWCVRE--DGA---LLGMTYIKE-QDVYAWHKHTTAGK 550
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 14/140 (10%)
Query: 8 KHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSN 67
K SF+ GEL+P L R DL + G + +N+I LRYG P + + R+
Sbjct: 10 KPSFAGGELTPALY-GRTDLQKYDVGASTLKNMIVLRYGGATRRPGFRHVAKTQGGKRA- 67
Query: 68 RVFSFSIPDGGYALLVFGDKKLQI-----VVVRSSTKWSPALFGKTYKTPYTFKDNKSLE 122
R+ F +L F +++ +VV+ +P + T YT D ++
Sbjct: 68 RLIPFQYSTEQSYVLEFTAGCIRVFTKGGIVVKDD---APLVI----PTSYTEADLSDIK 120
Query: 123 YAVFGSTAVFVHKDHPPHHL 142
Y VH +HPP L
Sbjct: 121 YTQSADVLFLVHVNHPPMTL 140
>gi|218700982|ref|YP_002408611.1| hypothetical protein ECIAI39_2672 [Escherichia coli IAI39]
gi|218370968|emb|CAR18795.1| conserved hypothetical protein from phage origin [Escherichia coli
IAI39]
gi|323948677|gb|EGB44582.1| hypothetical protein ERKG_04900 [Escherichia coli H252]
Length = 823
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 120/521 (23%), Positives = 217/521 (41%), Gaps = 72/521 (13%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQ-------EY 57
+W + SF+ GE+ P L R D++ + + K N I +YG + + P +
Sbjct: 4 SWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPN 62
Query: 58 RDCRLDP-RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFK 116
R CRL P + + V ++++ G + V D L V+ S+ + A TPYT
Sbjct: 63 RKCRLIPFQFSTVQTYALEFGHQYMRVIKDGAL--VLNSSNVIYEIA-------TPYTEA 113
Query: 117 DNKSLEYAVFGSTAVFVHKDHPPHHLL-YIQDGDKISFTFDEIKFLPPPWLGDGMISGVK 175
D +++ VH +PP L Y D ++ + +G +
Sbjct: 114 DLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTK----------NGPFEDIN 163
Query: 176 SNAKLSI-SQADTSTARITSDMKIFKPLDKGRSIRLGCHP-----PEWAKNTNYSIGAYI 229
+ +++ + A T T +T+ + IF G+ L P P W + + SIG
Sbjct: 164 IDESVTVYASASTGTITLTASVSIFGAEQVGKLFYLE-QPAVDSVPVWETSKSTSIGDIR 222
Query: 230 VADDKVYRSLTTGRSGD-RFGYSKGATYVKD-------NNITWITVLNLSSKTSRESASG 281
AD YR++T G++G R +++G ++ I W L+ +R +A+
Sbjct: 223 RADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEW-EYLHSGFGIARITAAN 281
Query: 282 AVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNN 341
IS P SQ + + S W AW GYP V ++
Sbjct: 282 GTT------------ATAEVISYIP-SQVVGEDNASY-KWAKYAWNSVNGYPGTVVYYQQ 327
Query: 342 RLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM-HPFG 400
RL F+ S +++ S G + DF G +PT+ + ++ ++ + H
Sbjct: 328 RLYFAASTAFPQTIWASRTGDYKDF------GKSNPTQDDDRIIYTYAGRQVNEIRHLID 381
Query: 401 EGVLVGCDT-SLWLLSISLSKGL---SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRI 456
G LV + ++++ +K L S F +G PP++V + +FV G +
Sbjct: 382 VGSLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVV 441
Query: 457 KYISGSTE-QGFRFNEITQLADHLFNQR-ILQLVYQEEPHS 495
+ ++ S + G++ N++T LA+HLF + I+ + P+S
Sbjct: 442 RDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYS 482
>gi|169795391|ref|YP_001713184.1| phage-like protein [Acinetobacter baumannii AYE]
gi|169148318|emb|CAM86183.1| hypothetical protein; putative phage related protein [Acinetobacter
baumannii AYE]
Length = 697
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 120/511 (23%), Positives = 199/511 (38%), Gaps = 74/511 (14%)
Query: 8 KHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSN 67
K++ S+GELSP LL +R D+ +A G K N +PL G P ++R + +
Sbjct: 12 KNNLSSGELSP-LLWTRTDIQQYANGAKKLLNALPLVEGGAKKRP-GTKFRS--IFAGAL 67
Query: 68 RVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKT--PY-TFKDNKSLEYA 124
R+ F LL+ G L++ ++P + Y+T PY T + + ++YA
Sbjct: 68 RLIPFIANSENTYLLILGVSFLKV--------YNPRTYAVVYETVTPYNTAQKVREVQYA 119
Query: 125 VFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQ 184
FV D P LL D F P LG S +++S
Sbjct: 120 HTKYRMYFVQGDTPVQRLLCSADFTNWQFAAFTFGVNPNDELG--------STPNVALSP 171
Query: 185 ADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRS 244
+ T ++ S P W+ Y G ++ + K +R+ +
Sbjct: 172 SGTEVGKVIS--------------LTASSFPNWSNTETYLTGDRVIHNSKTWRA-----T 212
Query: 245 GDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIK-----DVSKDG 299
D G AT + W V N ++ ++ G++ G +K D S+
Sbjct: 213 ADNKGVEPSATTPE-----WEEVTNEAANVFTPASVGSIVEIN-GGQVKITEYVDPSRVN 266
Query: 300 RSISVAPQSQTLFQAGVSVVSWFMS--AWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYL 357
+ V S A SW + A+ + GYP V F RL+F+ +K ++
Sbjct: 267 GEVLVKLTSDVQAIAK----SWVLKSIAFSAEAGYPKAVCFFKQRLVFANTKTSPNQMWF 322
Query: 358 SSF---GAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLL 414
S G F + + D + A + A + + I + G V + +
Sbjct: 323 SRIGDDGNFLETTQDAD--------AFSIASSSAQSDNILHLSQRGGVVALTGGAEFLIN 374
Query: 415 SISLSKGLSIDFRRVSGSGVYA-CPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEI 472
S S + GV A P VG+ L+FV G R++ +S E G E+
Sbjct: 375 SQGPLTPASAQIDEHTSYGVQANVKPCRVGNELLFVQRGGERLRAMSYRYEVDGLVSPEL 434
Query: 473 TQLADHLFNQR--ILQLVYQEEPHSIVWVVL 501
+Q+A H+ I +L +Q+ P+SIVW+V+
Sbjct: 435 SQIAPHIPENHAGIKELTFQQTPNSIVWIVM 465
>gi|324008552|gb|EGB77771.1| conserved domain protein [Escherichia coli MS 57-2]
Length = 823
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 120/526 (22%), Positives = 219/526 (41%), Gaps = 72/526 (13%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQ-------EY 57
+W + SF+ GE+ P L R D++ + + K N I +YG + + P +
Sbjct: 4 SWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPN 62
Query: 58 RDCRLDP-RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFK 116
R CRL P + + V ++++ G + V D L V+ S+ + A TPYT
Sbjct: 63 RKCRLIPFQFSTVQTYALEFGHQYMRVIKDGAL--VLNSSNVIYEIA-------TPYTEA 113
Query: 117 DNKSLEYAVFGSTAVFVHKDHPPHHLL-YIQDGDKISFTFDEIKFLPPPWLGDGMISGVK 175
D +++ VH +PP L Y D ++ + +G +
Sbjct: 114 DLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTK----------NGPFEDIN 163
Query: 176 SNAKLSI-SQADTSTARITSDMKIFKPLDKGRSIRLGCHP-----PEWAKNTNYSIGAYI 229
+ +++ + A T T +T+ IF G+ L P P W + + SIG
Sbjct: 164 IDESVTVYASASTGTITLTASASIFGAEQVGKLFYLE-QPAVDSVPVWETSKSTSIGDIR 222
Query: 230 VADDKVYRSLTTGRSGD-RFGYSKGATYVKD-------NNITWITVLNLSSKTSRESASG 281
AD YR++T G++G R +++G ++ I W L+ +R +A+
Sbjct: 223 RADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEW-EYLHSGFGIARITAA- 280
Query: 282 AVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNN 341
+ IS P SQ + + S W AW GYP V ++
Sbjct: 281 -----------NGTTATAEVISYIP-SQVVGEDNASY-KWAKYAWNSVNGYPGTVVYYQQ 327
Query: 342 RLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM-HPFG 400
RL F+ S +++ S G + DF G +PT+ + ++ ++ + H
Sbjct: 328 RLYFAASTAFPQTIWASRTGDYKDF------GKSNPTQDDDRIIYTYAGRQVNEIRHLID 381
Query: 401 EGVLVGCDT-SLWLLSISLSKGL---SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRI 456
G LV + ++++ +K L S F +G PP++V + +FV G +
Sbjct: 382 VGSLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVV 441
Query: 457 KYISGSTE-QGFRFNEITQLADHLFNQR-ILQLVYQEEPHSIVWVV 500
+ ++ S + G++ N++T LA+HLF + I+ + P+S + +
Sbjct: 442 RDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCI 487
>gi|331648168|ref|ZP_08349258.1| conserved hypothetical protein [Escherichia coli M605]
gi|331043028|gb|EGI15168.1| conserved hypothetical protein [Escherichia coli M605]
Length = 823
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 120/521 (23%), Positives = 217/521 (41%), Gaps = 72/521 (13%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQ-------EY 57
+W + SF+ GE+ P L R D++ + + K N I +YG + + P +
Sbjct: 4 SWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPN 62
Query: 58 RDCRLDP-RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFK 116
R CRL P + + V ++++ G + V D L V+ S+ + A TPYT
Sbjct: 63 RKCRLIPFQFSTVQTYALEFGHQYMRVIKDGAL--VLNSSNVIYEIA-------TPYTEA 113
Query: 117 DNKSLEYAVFGSTAVFVHKDHPPHHLL-YIQDGDKISFTFDEIKFLPPPWLGDGMISGVK 175
D +++ VH +PP L Y D ++ + +G +
Sbjct: 114 DLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTK----------NGPFEDIN 163
Query: 176 SNAKLSI-SQADTSTARITSDMKIFKPLDKGRSIRLGCHP-----PEWAKNTNYSIGAYI 229
+ +++ + A T T +T+ IF G+ L P P W + + SIG
Sbjct: 164 IDESVTVYASASTGTITLTASASIFGAEQVGKLFYLE-QPAVDSVPVWETSKSTSIGDIR 222
Query: 230 VADDKVYRSLTTGRSGD-RFGYSKGATYVKD-------NNITWITVLNLSSKTSRESASG 281
AD YR++T G++G R +++G ++ I W L+ +R +A+
Sbjct: 223 RADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEW-EYLHSGFGIARITAA- 280
Query: 282 AVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNN 341
+ IS P SQ + + S W AW GYP V ++
Sbjct: 281 -----------NGTTATAEVISYIP-SQVVGEDNASY-KWAKYAWNSVNGYPGTVVYYQQ 327
Query: 342 RLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM-HPFG 400
RL F+ S +++ S G + DF G +PT+ + ++ ++ + H
Sbjct: 328 RLYFAASTAFPQTIWASRTGDYKDF------GKSNPTQDDDRIIYTYAGRQVNEIRHLID 381
Query: 401 EGVLVGCDT-SLWLLSISLSKGL---SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRI 456
G LV + ++++ +K L S F +G PP++V + +FV G +
Sbjct: 382 VGSLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVV 441
Query: 457 KYISGSTE-QGFRFNEITQLADHLFNQR-ILQLVYQEEPHS 495
+ ++ S + G++ N++T LA+HLF + I+ + P+S
Sbjct: 442 RDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYS 482
>gi|298381710|ref|ZP_06991309.1| conserved hypothetical protein [Escherichia coli FVEC1302]
gi|298279152|gb|EFI20666.1| conserved hypothetical protein [Escherichia coli FVEC1302]
Length = 823
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 120/521 (23%), Positives = 217/521 (41%), Gaps = 72/521 (13%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQ-------EY 57
+W + SF+ GE+ P L R D++ + + K N I +YG + + P +
Sbjct: 4 SWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPN 62
Query: 58 RDCRLDP-RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFK 116
R CRL P + + V ++++ G + V D L V+ S+ + A TPYT
Sbjct: 63 RKCRLIPFQFSTVQTYALEFGHQYMRVIKDGAL--VLNSSNVIYEIA-------TPYTEA 113
Query: 117 DNKSLEYAVFGSTAVFVHKDHPPHHLL-YIQDGDKISFTFDEIKFLPPPWLGDGMISGVK 175
D +++ VH +PP L Y D ++ + +G +
Sbjct: 114 DLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTK----------NGPFEDIN 163
Query: 176 SNAKLSI-SQADTSTARITSDMKIFKPLDKGRSIRLGCHP-----PEWAKNTNYSIGAYI 229
+ +++ + A T T +T+ IF G+ L P P W + + SIG
Sbjct: 164 IDESVTVYASASTGTITLTASASIFGAEQVGKLFYLE-QPAVDSVPVWETSKSTSIGDIR 222
Query: 230 VADDKVYRSLTTGRSGD-RFGYSKGATYVKD-------NNITWITVLNLSSKTSRESASG 281
AD YR++T G++G R +++G ++ I W L+ +R +A+
Sbjct: 223 RADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEW-EYLHSGFGIARITAA- 280
Query: 282 AVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNN 341
+ IS P SQ + + S W AW GYP V ++
Sbjct: 281 -----------NGTTATAEVISYIP-SQVVGEDNASY-KWAKYAWNSVNGYPGTVVYYQQ 327
Query: 342 RLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM-HPFG 400
RL F+ S +++ S G + DF G +PT+ + ++ ++ + H
Sbjct: 328 RLYFAASTAFPQTIWASRTGDYKDF------GKSNPTQDDDRIIYTYAGRQVNEIRHLID 381
Query: 401 EGVLVGCDT-SLWLLSISLSKGL---SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRI 456
G LV + ++++ +K L S F +G PP++V + +FV G +
Sbjct: 382 VGSLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVV 441
Query: 457 KYISGSTE-QGFRFNEITQLADHLFNQR-ILQLVYQEEPHS 495
+ ++ S + G++ N++T LA+HLF + I+ + P+S
Sbjct: 442 RDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYS 482
>gi|117624704|ref|YP_853617.1| hypothetical protein APECO1_4049 [Escherichia coli APEC O1]
gi|115513828|gb|ABJ01903.1| conserved hypothetical protein [Escherichia coli APEC O1]
Length = 823
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 116/519 (22%), Positives = 213/519 (41%), Gaps = 58/519 (11%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQ-------EY 57
+W + SF+ GE+ P L R D++ + + K N I +YG + + P +
Sbjct: 4 SWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPN 62
Query: 58 RDCRLDP-RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFK 116
R CRL P + + V ++++ G + V D L V+ S+ + A TPYT
Sbjct: 63 RKCRLIPFQFSTVQTYALEFGHQYMRVIKDGAL--VLNSSNVIYEIA-------TPYTEA 113
Query: 117 DNKSLEYAVFGSTAVFVHKDHPPHHLL-YIQDGDKISFTFDEIKFLPPPWLGDGMISGVK 175
D +++ VH +PP L Y D ++ + +G +
Sbjct: 114 DLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQLVDVVTK----------NGPFEDIN 163
Query: 176 SNAKLSI-SQADTSTARITSDMKIFKPLDKGRSIRLGCHP-----PEWAKNTNYSIGAYI 229
+ +++ + A T T +T+ IF G+ L P P W + + SIG
Sbjct: 164 IDESVTVYASASTGTITLTASASIFGAEQVGKLFYLE-QPAVDSVPVWETSKSTSIGDIR 222
Query: 230 VADDKVYRSLTTGRSGD-RFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYV 288
AD YR++T G++G R +++G ++ + +
Sbjct: 223 RADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDIGIEWEYLHSGFGIARITAANG 282
Query: 289 WGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGS 348
+V IS P SQ + + S W AW GYP V ++ RL F+ S
Sbjct: 283 TTATAEV------ISYIP-SQVVGEDNASY-KWAKYAWNSVNGYPGTVVYYQQRLYFAAS 334
Query: 349 KGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM-HPFGEGVLVGC 407
+++ S G + DF G +PT+ + ++ ++ + H G LV
Sbjct: 335 TAFPQTIWASRTGDYKDF------GKSNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVAL 388
Query: 408 DT-SLWLLSISLSKGL---SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGST 463
+ ++++ +K L S F +G PP++V + +FV G ++ ++ S
Sbjct: 389 TSGGEYVITGDQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSF 448
Query: 464 E-QGFRFNEITQLADHLFNQR-ILQLVYQEEPHSIVWVV 500
+ G++ N++T LA+HLF + I+ + P+S + +
Sbjct: 449 DVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCI 487
>gi|304398395|ref|ZP_07380269.1| conserved hypothetical protein [Pantoea sp. aB]
gi|304354261|gb|EFM18634.1| conserved hypothetical protein [Pantoea sp. aB]
Length = 824
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 114/520 (21%), Positives = 200/520 (38%), Gaps = 68/520 (13%)
Query: 10 SFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNRV 69
SF+ GE+SP + R DL+ ++ + + RN I +YG L + P + + + R R+
Sbjct: 9 SFAGGEISPNVY-GRVDLAKYSIALRRCRNFIVRQYGGLENRPGTRFIAEAKYPDRKCRL 67
Query: 70 FSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKT----YKTPYTFKDNKSLEYAV 125
F L FG +++ L G TPY D L+
Sbjct: 68 IPFQFSTVQTYALEFGHNYMRVY-----KDGGQVLDGNNQVYELATPYQEADLFELKITQ 122
Query: 126 FGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQA 185
HK + P L S+ E+ P+ + VK A S Q
Sbjct: 123 SADVMTICHKAYAPRELRRF---GHASWELVEVVTKNGPFEDINIDPSVKVYA--SSYQG 177
Query: 186 DTSTARITSDMKIFKPLDKGRSIRLGC----HPPEWAKNTNYSIGAYIVADDKVYRSLTT 241
+ + + ++ IF G+ L P W + ++G A D Y +LT
Sbjct: 178 NIT---LNANASIFGSEQVGKLFYLEQVNVDSTPVWETDKAVAVGMTRRAGDNYYVALTA 234
Query: 242 GRSGD-RFGYSKGATYV-------KDNNITW------ITVLNLSSKTSRESASGAVAPYY 287
G++G R +++GA + D I W + ++S +S + AV Y
Sbjct: 235 GKTGTLRPSHTEGAAWDGWGSNGDNDTGIQWEYQHSGFGIARITSVSSDGYIAAAVVQTY 294
Query: 288 VWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSG 347
+ D +V P + W AW + GYP VT++ RL+F+
Sbjct: 295 MPND-----------AVGPTKASY--------KWAKFAWNQVNGYPGTVTYYQQRLIFAA 335
Query: 348 SKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM-HPFGEGVLVG 406
S +++ S G + DF G P V ++ ++ + H G LV
Sbjct: 336 SIKYPQTIWCSKTGDYKDF------GKTSPIADDDRIVYTYAGKQVNEIRHLIDVGSLVA 389
Query: 407 CDTSLWLLSIS-LSKGLS---IDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGS 462
+ + +K L+ F G + P++V + +F+ G ++ ++ S
Sbjct: 390 LTSGGQFQIVGDQNKTLTPTAFSFSSQGADGASSVAPITVSNIALFIQEKGSVVRDLAYS 449
Query: 463 TE-QGFRFNEITQLADHLFN-QRILQLVYQEEPHSIVWVV 500
+ G++ +++T LA+HLFN R++ + P+S W V
Sbjct: 450 FDVDGYQGSDLTVLANHLFNGYRLVDWTFSVVPYSAGWAV 489
>gi|294648405|ref|ZP_06725904.1| phage protein [Acinetobacter haemolyticus ATCC 19194]
gi|292825710|gb|EFF84414.1| phage protein [Acinetobacter haemolyticus ATCC 19194]
Length = 706
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 130/571 (22%), Positives = 217/571 (38%), Gaps = 68/571 (11%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M K++F++GELSP + R DL + G + N +P+ G L +
Sbjct: 1 MAKINLIKNNFTSGELSPHIWM-RTDLQQYRNGTKEMLNFLPIIEGGLKRRGGTEA---L 56
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
+ + R+ F I LL+F ++ ++ + + K+ TPYT +D K
Sbjct: 57 AITAGAIRILPFIISHSTAYLLIFKPNQIDVLDINGTVV-------KSLSTPYTAQDIKE 109
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKIS-FTFDEIKFLPPPWLGDGMISGVKSNAK 179
+ Y H HP L +++ + ++ +++D F PP + V++ A
Sbjct: 110 ISYTQNRYQFYIAHSKHP---LAWLRASEDLTNWSYDPFDFYVPP------LEEVETPAL 160
Query: 180 LSISQADTSTARITSDMKIFKPLDKGRSIRLG--CHPPEWAKNTNYSIGAYIVADDKVYR 237
S + T + D + + G CH N Y A +
Sbjct: 161 PLKSNEKNAGKVATLTASPYNIYDNSKRYQAGEICH--HTINNVKYYFRALRITQGNTPS 218
Query: 238 SLTTGRSGDRFGYSKGATYVKDNNITWITV---LNLSSKTSRESASGAVAPYYVWGDI-K 293
T+G Y + T + T V + ++ R V+P V G+I
Sbjct: 219 FGTSGPEASPDYYWETTTVTEAQAFTAADVDKFVFINEGIVR--IDTYVSPSTVTGEILV 276
Query: 294 DVSKDGRSISVA-PQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDE 352
+S D +I+ A Q +F+ + GYP VT + RL+ +G+K
Sbjct: 277 KLSTDIEAIANAWTLKQDIFEVSL--------------GYPRAVTMYQQRLVIAGTKTYP 322
Query: 353 LSVYLSSFGAFYDF---SLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDT 409
V+LS G +F + DG+ +A +D + +H G V+ G
Sbjct: 323 NYVWLSRVGDVTNFLPTTSDGD-------SFTVSASSDQLTNVLHLAQSRGICVMTGGSE 375
Query: 410 SLWLLSISLSKGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIK-YISGSTEQGFR 468
+ S++ + S P+ VG L+FV RI+ + +
Sbjct: 376 LVISSQNSMTPTNTSILEHTSFGSTENIKPIKVGSELIFVQRGAERIRTLLYDYSIDSLT 435
Query: 469 FNEITQLADHLFNQR--ILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAW 526
NE+T LA H+ + ++VY EP SI+W VL +L + E + AW
Sbjct: 436 SNELTVLASHIAKKSGGFKEMVYCAEPDSIIWFVL-----GNGKLASLTLNRE-QSVIAW 489
Query: 527 HTHMISDKHYVLSAASFPNDNRGGTSLWMLV 557
TH I VLS S P+ G L+ LV
Sbjct: 490 STHDIGGT--VLSLTSLPS-TTGADRLYFLV 517
>gi|332875218|ref|ZP_08443051.1| carbohydrate binding domain protein [Acinetobacter baumannii
6014059]
gi|332736662|gb|EGJ67656.1| carbohydrate binding domain protein [Acinetobacter baumannii
6014059]
Length = 692
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 196/511 (38%), Gaps = 74/511 (14%)
Query: 8 KHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSN 67
K++ S+GELSP LL +R D+ +A G K N +PL G P ++R + +
Sbjct: 7 KNNLSSGELSP-LLWTRTDIQQYANGAKKLLNALPLVEGGAKKRP-GTKFRS--IFAGAL 62
Query: 68 RVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYK--TPY-TFKDNKSLEYA 124
R+ F LL+ G L++ ++P + Y+ TPY T + + ++YA
Sbjct: 63 RLIPFIANSENTYLLILGVSFLKV--------YNPRTYAVVYEAVTPYNTAQKVREVQYA 114
Query: 125 VFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQ 184
FV D P LL D F P LG S +++S
Sbjct: 115 HTKYRMYFVQGDTPVQRLLCSADFTNWQFAAFTFGVNPNDELG--------STPNVALSP 166
Query: 185 ADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRS 244
+ T ++ S P W+ Y G ++ K +R+
Sbjct: 167 SGTEVGKVIS--------------LTASSFPNWSNTETYLTGDRVIHTSKTWRATI---- 208
Query: 245 GDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIK-----DVSKDG 299
D G AT + W V N ++ S+ G++ G +K D S+
Sbjct: 209 -DNKGVEPSATTSE-----WEEVTNEAANVFTPSSVGSIVEIN-GGQVKITQYVDPSRVN 261
Query: 300 RSISVAPQSQTLFQAGVSVVSWFMS--AWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYL 357
+ V S A SW + A+ GYP V F RL+F+ +K ++
Sbjct: 262 GEVLVKLTSTVQAIAK----SWVLKSIAFSATAGYPKAVCFFKQRLVFANTKTSPNQMWF 317
Query: 358 SSF---GAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLL 414
S G F + + D + A + A + + I + G V + +
Sbjct: 318 SRIGDDGNFLETTQDAD--------AFSIASSSAQSDNILHLSQRGGVVALTGGAEFLIN 369
Query: 415 SISLSKGLSIDFRRVSGSGVYA-CPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEI 472
S S + GV A P VG+ L+FV G R++ +S E G E+
Sbjct: 370 SQGPLTPASAQIDEHTSYGVQANVKPCRVGNELLFVQRGGERLRAMSYRYEVDGLVSPEL 429
Query: 473 TQLADHLFNQR--ILQLVYQEEPHSIVWVVL 501
+Q+A H+ I +L +Q+ P+SIVW+V+
Sbjct: 430 SQIAPHIPENHAGIKELTFQQTPNSIVWIVM 460
>gi|293609614|ref|ZP_06691916.1| predicted protein [Acinetobacter sp. SH024]
gi|292828066|gb|EFF86429.1| predicted protein [Acinetobacter sp. SH024]
Length = 692
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 117/508 (23%), Positives = 195/508 (38%), Gaps = 68/508 (13%)
Query: 8 KHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSN 67
K++ S+GELSP LL +R D+ +A G K N +PL G P ++R + +
Sbjct: 7 KNNLSSGELSP-LLWTRTDIQQYANGAKKLLNALPLVEGGAKKRP-GTKFRS--IFAGAL 62
Query: 68 RVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKT--PY-TFKDNKSLEYA 124
R+ F LL+ G L++ ++P + Y+T PY T + + ++YA
Sbjct: 63 RLIPFIANSENTYLLILGVSFLKV--------YNPRTYAVVYETVTPYNTAQKVREVQYA 114
Query: 125 VFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQ 184
FV D P LL D F P LG S +++S
Sbjct: 115 HTKYRMYFVQGDTPVQRLLCSADFTNWQFAAFTFGVNPNDELG--------STPNVALSP 166
Query: 185 ADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRS 244
+ T ++ S P W+ Y G ++ K +R+
Sbjct: 167 SGTEVGKVIS--------------LTASSFPNWSNTETYLTGDRVIHSGKTWRATI---- 208
Query: 245 GDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISV 304
D G AT + W V N ++ S G++ + G +++ V
Sbjct: 209 -DNKGVEPTATTSE-----WEEVTNEAANVFTPSNVGSIIE--INGGQVKITQYVDPSRV 260
Query: 305 APQSQTLFQAGVSVV--SWFMS--AWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSF 360
+ + V + SW + A+ GYP V F RL+F+ +K ++ S
Sbjct: 261 NGEVLVKLTSAVQAIAKSWVLKSIAFSATAGYPKAVCFFKQRLVFANTKTSPNQMWFSRI 320
Query: 361 ---GAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSIS 417
G F + + D + A + A + + I + G V + + S
Sbjct: 321 GDDGNFLETTQDAD--------AFSIASSSAQSDNILHLSQRGGVVALTGGAEFLINSQG 372
Query: 418 LSKGLSIDFRRVSGSGVYA-CPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQL 475
S + GV A P VG+ L+FV G R++ +S E G E++Q+
Sbjct: 373 PLTPASAQIDEHTSYGVQANVKPCRVGNELLFVQRGGERLRAMSYRYEVDGLISPELSQI 432
Query: 476 ADHLFNQR--ILQLVYQEEPHSIVWVVL 501
A H+ I +L +Q+ P+SIVW+V+
Sbjct: 433 APHIPENHAGIKELTFQQTPNSIVWIVM 460
>gi|282848883|ref|ZP_06258273.1| hypothetical protein HMPREF1035_1392 [Veillonella parvula ATCC
17745]
gi|282581388|gb|EFB86781.1| hypothetical protein HMPREF1035_1392 [Veillonella parvula ATCC
17745]
Length = 772
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 108/577 (18%), Positives = 222/577 (38%), Gaps = 78/577 (13%)
Query: 10 SFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNRV 69
+F+ GE+SP + SR DL + + ++ N++ YG + Q + + R+
Sbjct: 11 AFTTGEVSPDV-SSRFDLEQYKSALLEAENVVIRPYGAVAKRQGSQYVGQVKYSDKPTRL 69
Query: 70 FSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALF-GKTYKTPYTFKDNKSLEYAVFGS 128
F F+ +L FGDK +++ W+ ++ G TP+T L + G
Sbjct: 70 FEFTTNTNNSFMLEFGDKYIRV--------WNYGVYTGIEVTTPFTSDILFDLNCSQSGD 121
Query: 129 TAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQADTS 188
+P L D D + + K P+ D + + V S ++ +S
Sbjct: 122 VMFICSGKYPIQTLSRYSDTD---WRLEAYKLTEQPY--DTINTDVNSTVTVTGDTIRSS 176
Query: 189 TARITSDM--------------------KIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAY 228
+DM + + +K RS G + N NY++ +Y
Sbjct: 177 KDLFNADMVGMVMQLGYFVAAVHTKNTGTVVEKKEK-RSFMGGFNKWNEYNNINYNVESY 235
Query: 229 IVADDKVYRSLT----TGRSGDRFGYSKGATYV--------KDNNITWITVLNLSSKTSR 276
D ++ T TG + + G T+ D N+T + ++K
Sbjct: 236 STDQDLAWKFTTHGTWTGTVKLQITTNNGTTWKDYRTYSSNNDYNVTDAGKIEPNAKLRI 295
Query: 277 ES--ASG------AVAPYYVWGDIK-DVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWG 327
+S SG ++ PY WG ++ D +++ + + + S W M +WG
Sbjct: 296 QSDIKSGECNVDLSILPYTTWGIVEFKEFVDSKTMKINILNGIVENEATS--KWKMGSWG 353
Query: 328 EQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTD 387
GYP TF+ +R + + + + +++S G + +F ++ G ++T V +
Sbjct: 354 RSNGYPKLCTFYQDRFVVAATNKNPNYIWMSRTGDYPNFGVEKVEGTITDDSSITLPVIN 413
Query: 388 FSASTIHWMHPFGEGVLVGCDTSLWLLSISLS-KGLSIDFRRVSGSGVYACPPVSVGDCL 446
I + P + +++ W++S + + + + + G +C P +G+
Sbjct: 414 RKMYEIRHLVPANDLIILTSGNE-WIVSGDKTITPTNCNLKTQTQRGALSCEPQFIGNRC 472
Query: 447 VFVCGVGRRIKYISGSTE------QGFRFNEITQLADHLFNQRILQLVYQEEPHSIVWVV 500
VFV G ++ + S E Q T++ +L + Y ++P SI++ +
Sbjct: 473 VFVQERGGTVRDMGYSYESDNYTGQDLTLFVKTRVRGYL----TITSAYAQDPDSIIYYI 528
Query: 501 LEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYV 537
+ + C + + W +H +++ Y+
Sbjct: 529 RNDGE------INCLTYIPEQKVYGW-SHFVTNGKYL 558
>gi|195541813|gb|ACF98016.1| hypothetical protein [uncultured bacterium 878]
Length = 926
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 113/293 (38%), Gaps = 39/293 (13%)
Query: 288 VWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSG 347
WG K ++ ++SV + F + +W + + + GYPS VTF+ RL + G
Sbjct: 356 TWGYAK-ITAYTSAVSVTADVLSNFGGTAASSAWRLGLYSQGGGYPSCVTFYEGRLFWGG 414
Query: 348 SKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSAS---------TIHWMHP 398
V D S+ Y + P+ + D + + + WM
Sbjct: 415 CPLAPTRV---------DGSMSSNYETFSPSSTASVVADDNAVAYPLDSGDVNNVLWMKD 465
Query: 399 FGEGVLVGCDTSLWLLSISLSKG----LSIDFRRVSGSGVY-ACPPVSVGDCLVFVCGVG 453
+G+LVG W++ + G ++ R + G Y PV G ++FV
Sbjct: 466 DEKGLLVGTKGGEWVVRANTLNGALTPTNVKATRATTYGSYEGSQPVRTGKDIIFVQRKR 525
Query: 454 RRIKYISGSTE-QGFRFNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLL 512
R+++ ++ + E GF ++T L+ H+ QL +Q EP VW+ D P L
Sbjct: 526 RKVRNLNYTYEIDGFNAGDLTILSGHIGRLEFGQLAFQSEPEGWVWMTR--GDGQLPVLT 583
Query: 513 GCRFSAEGEGDFAWHTHMISDKH--------YVLSAASFPNDNRGGTSLWMLV 557
R E W ++ V S S P+ N +W++V
Sbjct: 584 YDR----DEQKIGWSRQIMGGYQDAARRRPPIVRSVCSIPDPNDARDEVWLIV 632
>gi|78357587|ref|YP_389036.1| hypothetical protein Dde_2545 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219992|gb|ABB39341.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 700
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 98/231 (42%), Gaps = 19/231 (8%)
Query: 332 YPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSAS 391
+P V F+ RL F+G+ +++ S + ++ D A+T + +
Sbjct: 279 WPGCVQFYQQRLCFAGTDEKPQTIWCSQSANYESMNISSPLRDDD---AVTVTIAADRVN 335
Query: 392 TIHWMHPFGEGVLVGCDTSLWLLSISLSKGLS---IDFRRVSGSGVYACPPVSVGDCLVF 448
I WM P +LVG W LS S L+ RR + G P+ +G ++F
Sbjct: 336 RIRWMMP-ARRLLVGTAGGEWQLSGSGDAPLTPVDAQLRRDTMHGSAGLMPLVIGQSILF 394
Query: 449 VCGVGRRIKYISGSTE-QGFRFNEITQLADHLF-NQRILQLVYQEEPHSIVWVVLEPKDN 506
V GR ++ + E G+ ++T LA+HL +RI+ YQ+ P S+VW L
Sbjct: 395 VQRDGRTVREFRYALESDGYDAGDLTILAEHLMRGRRIVSWCYQQSPASVVWCAL----- 449
Query: 507 SFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLV 557
S L F E E WH H +V + + P D G +W+ V
Sbjct: 450 SDGTLAAMTFLREHE-VVGWHRH--DTDGFVEAVTAIPGDE--GDEVWLSV 495
>gi|257139843|ref|ZP_05588105.1| hypothetical protein BthaA_11681 [Burkholderia thailandensis E264]
Length = 489
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 16/184 (8%)
Query: 324 SAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDF---SLDGEYGCYDPTKA 380
S W +GYP+ V+ RL +GS G + V+ S G + DF + DGE YD
Sbjct: 84 SMWNSIDGYPAAVSLFKQRLYAAGSTGYPMRVWASGIGLYLDFTPGTKDGEAFGYDMASD 143
Query: 381 LTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGLSIDFRRVSGSGVYACP-- 438
+++ I GE V ++ + +++ V VY C
Sbjct: 144 QVNQTVHLASAKILAALTQGEEFTVTGGSAGAITPTNIN---------VDSQSVYGCARA 194
Query: 439 -PVSVGDCLVFVCGVGRRIKYIS-GSTEQGFRFNEITQLADHLFNQRILQLVYQEEPHSI 496
PV VG+ +V+V G++++ ++ +R +T+LA H+ I+ + +Q EP +
Sbjct: 195 RPVRVGNEIVYVQRAGKKVRAMTYDLNTDAYRSQNLTRLAAHVTESGIVDVAFQAEPTPV 254
Query: 497 VWVV 500
VW+V
Sbjct: 255 VWMV 258
>gi|332160974|ref|YP_004297551.1| hypothetical protein YE105_C1352 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665204|gb|ADZ41848.1| Hypothetical phage protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862130|emb|CBX72294.1| hypothetical protein YEW_AK02310 [Yersinia enterocolitica W22703]
Length = 657
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 100/504 (19%), Positives = 195/504 (38%), Gaps = 98/504 (19%)
Query: 8 KHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSN 67
K +F+AGE+SPRL+ R D++ +A G N + + +G ++ P + + +
Sbjct: 7 KTNFTAGEISPRLM-GRVDIARYANGAKTVENAVCVIHGGVMRRPGSRFAAKAKFGDQKA 65
Query: 68 RVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVFG 127
R+ + +L FG+ ++ ++ + +PYT SL Y
Sbjct: 66 RLIPYVFNRSQAYVLEFGNGYVRFY--QNGAQIGAGSTPYEIASPYTSAMLSSLNYVQGA 123
Query: 128 STAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQADT 187
T VH+D PP+ L D + P P+
Sbjct: 124 DTMFLVHQDVPPYRLQRKGQTDWV--------LEPAPF---------------------- 153
Query: 188 STARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDR 247
I KP D+ R P +W K S+ ++ + +L+ SG
Sbjct: 154 ----------IVKPFDEIRDT-----PEKWCKP---SVKEFV--GSAITLTLSDAESG-- 191
Query: 248 FGYSKGATYVKDNNITWITV----LNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSIS 303
G GA +V + +++ + +++ + TS A+G + R++
Sbjct: 192 -GALTGAGWVGADVGSYVRINSGLVHIQAVTSAAVATGVI----------------RTVL 234
Query: 304 VAPQSQTLFQAGVSVVSWFM--SAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFG 361
A QS S +W + W + GYP T + RL+ +GS ++++S G
Sbjct: 235 SAVQSS-------SPGAWTREDAVWSAEFGYPGAATLYQQRLVLAGSPKYPQTIWMSETG 287
Query: 362 AFYDFSL----DGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSIS 417
+ F L D + + V +T+ + GE + G S +I+
Sbjct: 288 IYLSFELGTDDDDAISFTVSSDQINPIVHLAQMNTLIALTSTGEFTITGGGES----AIT 343
Query: 418 LSKGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTEQ--GFRFNEITQL 475
+ +I + S G + PV VG ++F+ R++ ++ + + N+++ L
Sbjct: 344 PT---NISVKNPSPYGCNSIKPVRVGTEIMFMQRANRKLFAVAYDPDSFVAYSANDLSVL 400
Query: 476 ADHLFNQRILQLVYQEEPHSIVWV 499
++H+ + + YQ+EP + +W+
Sbjct: 401 SEHITLSGAVDMAYQQEPDAFIWM 424
>gi|220903983|ref|YP_002479295.1| hypothetical protein Ddes_0709 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868282|gb|ACL48617.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 689
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 116/247 (46%), Gaps = 22/247 (8%)
Query: 332 YPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSAS 391
YP V FH R++ + + + + Y+S G F +F DP + L + S
Sbjct: 278 YPGIVAFHQQRMVLAATPKNPQAFYMSRVGDFENFRKSRPLQDDDPVEYL---IASGSID 334
Query: 392 TIHWMHPFGEGVLVGCDTSLWLLS----ISLSKG-LSIDFRRVSGSGVYACPPVSVGDCL 446
+ W FG+ +L+G S + S S++ G +SI + GS A P+ +G+ +
Sbjct: 335 AVTWAASFGD-LLIGTSGSEYKASGGDGASITAGNISITAQSYWGSAGLA--PIIIGNSI 391
Query: 447 VFVCGVGRRIKYISGSTEQ-GFRFNEITQLADHLFN-QRILQLVYQEEPHSIVWVVLEPK 504
+ V G R++ + S E+ G+ N+++ +A HLF ILQ YQ+ P S +W V +
Sbjct: 392 LHVQRHGSRVRDLFYSLEKDGYAGNDLSIMAPHLFEGHTILQWAYQQTPGSTIWCV---R 448
Query: 505 DNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVALSAGEE 564
D+ LL + E + + W + + VLSAA+ + +G T + + G+
Sbjct: 449 DDGL--LLAFTYMKEHD-IWGWSRQITQGR--VLSAAAISGE-KGDTLMLVTERRIDGQP 502
Query: 565 RSFTVRL 571
R F RL
Sbjct: 503 RIFLERL 509
>gi|83720451|ref|YP_441475.1| hypothetical protein BTH_I0919 [Burkholderia thailandensis E264]
gi|83654276|gb|ABC38339.1| conserved hypothetical protein [Burkholderia thailandensis E264]
Length = 405
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 16/182 (8%)
Query: 326 WGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDF---SLDGEYGCYDPTKALT 382
W +GYP+ V+ RL +GS G + V+ S G + DF + DGE YD
Sbjct: 2 WNSIDGYPAAVSLFKQRLYAAGSTGYPMRVWASGIGLYLDFTPGTKDGEAFGYDMASDQV 61
Query: 383 TAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGLSIDFRRVSGSGVYACP---P 439
+++ I GE V ++ + +++ V VY C P
Sbjct: 62 NQTVHLASAKILAALTQGEEFTVTGGSAGAITPTNIN---------VDSQSVYGCARARP 112
Query: 440 VSVGDCLVFVCGVGRRIKYIS-GSTEQGFRFNEITQLADHLFNQRILQLVYQEEPHSIVW 498
V VG+ +V+V G++++ ++ +R +T+LA H+ I+ + +Q EP +VW
Sbjct: 113 VRVGNEIVYVQRAGKKVRAMTYDLNTDAYRSQNLTRLAAHVTESGIVDVAFQAEPTPVVW 172
Query: 499 VV 500
+V
Sbjct: 173 MV 174
>gi|309702804|emb|CBJ02135.1| hypothetical phage protein [Escherichia coli ETEC H10407]
Length = 807
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 110/494 (22%), Positives = 195/494 (39%), Gaps = 72/494 (14%)
Query: 21 LQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNRVFSFSIPDGGYA 80
+ R D++ + + K N I +YG + + P + + + R R+ F
Sbjct: 1 MYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGEAKYPTRKCRLIPFQFSTVQTY 60
Query: 81 LLVFGDKKLQI------VVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVFGSTAVFVH 134
L FG +++ V+ S+ + A+ PY D +++ VH
Sbjct: 61 ALEFGHNYMRVIKDGAYVLNSSNVIYELAM-------PYADTDLFRIKFTQSADVLTLVH 113
Query: 135 KDHPPHHLL-YIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQADTSTARIT 193
+PP L Y D +I ++ P+ + VK A A T T +T
Sbjct: 114 PAYPPKELRRYAHDNWQIV----DVTTKNGPFEDINVDETVKVYAS-----ASTGTITLT 164
Query: 194 SDMKIFKPLDKGRSIRLGCHP-----PEWAKNTNYSIGAYIVADDKVYRSLTTGRSGD-R 247
+ IF G+ L P P W + +I AD YR+ T+G++G R
Sbjct: 165 ASSAIFGAEQVGKLFYLE-QPAIDSVPVWETSKTTAINDVRRADSNYYRANTSGKTGTLR 223
Query: 248 FGYSKGATYV-------KDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGR 300
+++G ++ D I W L+ +R +A VS DG
Sbjct: 224 PSHTEGMSWDGWGGTGDSDTGIQW-EYLHSGFGIARITA---------------VSSDGL 267
Query: 301 S-----ISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSV 355
+ +S P SQ + A S W AW GYPS V ++ RL F+ S ++
Sbjct: 268 TATATVVSYIP-SQVVGSANGSY-KWARYAWNSVNGYPSTVVYYQQRLYFAASTAYPQTI 325
Query: 356 YLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM-HPFGEGVLVGCDT-SLWL 413
+ S G + DF G +P + + ++ ++ + H G LV + +
Sbjct: 326 WASRTGDYKDF------GKNNPIQDDDRIIYTYAGRQVNEIRHLIDVGNLVALTSGGEYT 379
Query: 414 LSISLSKGLS---IDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRF 469
+S +K L+ F +G PP++V + +F+ G ++ ++ S + G++
Sbjct: 380 ISGDQNKVLTPSAFSFSSQGNNGSSNVPPIAVANIALFIQEKGSVVRDLAYSFDVDGYQG 439
Query: 470 NEITQLADHLFNQR 483
++T LA+HLF +R
Sbjct: 440 TDLTILANHLFQKR 453
>gi|254251749|ref|ZP_04945067.1| hypothetical protein BDAG_00946 [Burkholderia dolosa AUO158]
gi|124894358|gb|EAY68238.1| hypothetical protein BDAG_00946 [Burkholderia dolosa AUO158]
Length = 545
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 10/179 (5%)
Query: 326 WGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSL---DGEYGCYDPTKALT 382
W +GYP V+ + RL +GS G V+ S+ G +YDF+ DG+ YD
Sbjct: 142 WNPTDGYPCAVSLYQQRLYAAGSSGYPERVWASATGLYYDFTPGTDDGDGFSYDVASDQV 201
Query: 383 TAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGLSIDFRRVSGSGVYACPPVSV 442
+ ++S I + GE + S+ +I+ R S G PV V
Sbjct: 202 NQIMHLASSRILTVLTQGEEFTIDGG------SVGSITPTNINVRSQSIYGTARPRPVRV 255
Query: 443 GDCLVFVCGVGRRIKYISGS-TEQGFRFNEITQLADHLFNQRILQLVYQEEPHSIVWVV 500
G+ L+F ++I+ ++ FR +T+LA H+ ++ + +Q EP +VW+V
Sbjct: 256 GNELIFPQRAAKKIRSMAYDFNTDSFRSQNLTRLAAHITESGVVDIAFQAEPTPVVWMV 314
>gi|330007163|ref|ZP_08305905.1| hypothetical protein HMPREF9538_03594 [Klebsiella sp. MS 92-3]
gi|328535510|gb|EGF61970.1| hypothetical protein HMPREF9538_03594 [Klebsiella sp. MS 92-3]
Length = 825
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 116/575 (20%), Positives = 210/575 (36%), Gaps = 92/575 (16%)
Query: 10 SFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNRV 69
S + GE+SP L R DL + + + RN I + G + + P + + R +R+
Sbjct: 9 SLAGGEISPSLY-GRIDLEKYQTSLRRCRNFIVRQSGGIENRPGFRFLGSAKYADRYSRL 67
Query: 70 FSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGK------TYKTPYTFKDNKSLEY 123
F L GD ++ WS TP+ L++
Sbjct: 68 IPFQFSVSQTYALELGDHYFRV--------WSNGALVTDGGSPVEVATPWPVSVISELKF 119
Query: 124 AVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSI- 182
H D+PP + + D + G + ++ +++
Sbjct: 120 TQSADVMTVCHNDYPPLEIRRYGEADWRTAAVTTTS---------GPFQDLNTDDSVTVY 170
Query: 183 SQADTSTARITSDMKIFKPLDKGRSIRLGCHPPE----WAKNTNYSIGAYIVADDKVYRS 238
+ T + +T+ IFK G+ + + W + + +G + YR
Sbjct: 171 ASGRTGSVTLTASSPIFKSQHVGKLFYMEQKAVDSVGRWETDKDIGVGDECRYQENFYRC 230
Query: 239 L---------------TTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAV 283
+ TTG S D +G N + W + S G
Sbjct: 231 VDGGSNGTTGTVAPTHTTGDSWDGWGLGG------RNGVLWRYL---------HSGFGVC 275
Query: 284 APYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVS-------WFMSAWGEQEGYPSHV 336
+ GD + D V P+ + VV W AW + +GYP V
Sbjct: 276 RITAIAGDGLTATAD-----VVPRQDGEIELPAQVVGSTFATYKWAHYAWNDTDGYPGTV 330
Query: 337 TFHNNRLLFSGSKGDELSVYLSSFGAFYDF-----SLDGEYGCYD-PTKALTTAVTDFSA 390
T++ RL+F GS+ +++ S G +++F +D + Y+ + L +
Sbjct: 331 TYYQQRLIFGGSRAFPQTIWCSRTGDYHNFYRSNPKVDDDAITYNYAGRQLNKILHLLDV 390
Query: 391 STIHWMHPFGEGVLVGCDTSLWLLSISLSKGLSIDFRRVSGSGVYACPPVSVGDCLVFVC 450
+ + GE + G +++ + G ++ + +GS A P++VG ++V
Sbjct: 391 GQLIVLTSGGEFKVTGDSNG----NLTGTGGFAMSGQSFNGSSDLA--PINVGSVALYVQ 444
Query: 451 GVGRRIKYISGSTEQ-GFRFNEITQLADHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSF 508
G I+ + S +Q ++ +++T LA HLFN I +P S+ W S
Sbjct: 445 QKGSIIRDLFYSFDQDSYQSSDLTLLASHLFNGYSIRDWALSVQPFSVAWCA-----RSD 499
Query: 509 PRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASF 543
LLG + E + +AWH H +++ YV S S
Sbjct: 500 GMLLGLTYLRE-QQVYAWHPHPMTNG-YVESICSI 532
>gi|212703338|ref|ZP_03311466.1| hypothetical protein DESPIG_01381 [Desulfovibrio piger ATCC 29098]
gi|212673248|gb|EEB33731.1| hypothetical protein DESPIG_01381 [Desulfovibrio piger ATCC 29098]
Length = 703
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 12/174 (6%)
Query: 333 PSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSAST 392
PS V FH R++ +G++ + YLS G F +F DP + L + S
Sbjct: 291 PSVVAFHQQRMVLAGTRDSPQAFYLSRSGDFENFRKSRPLQDDDPVEYL---IASGSIDA 347
Query: 393 IHWMHPFGEGVLVGCDTSLWLLSISLSK----GLSIDFRRVSGSGVYACPPVSVGDCLVF 448
I W FG+ +L+G S + S + S ++I + GS A P+ +G+ ++
Sbjct: 348 IAWAASFGD-LLLGTSGSEYKASGNGSAITPGNITITAQSYWGSAGLA--PIIIGNAILH 404
Query: 449 VCGVGRRIKYISGSTEQ-GFRFNEITQLADHLFN-QRILQLVYQEEPHSIVWVV 500
V G ++ + S E+ G+ N+++ LA HLF R+ Q YQ+ P S++W+V
Sbjct: 405 VQRHGAHVRDLFYSLEKDGYAGNDLSILAPHLFEGHRLRQWAYQQTPGSVLWIV 458
>gi|303327644|ref|ZP_07358084.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
gi|302862005|gb|EFL84939.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
Length = 681
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 115/520 (22%), Positives = 196/520 (37%), Gaps = 119/520 (22%)
Query: 10 SFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMP----LMQEYRDCRLDPR 65
+F+ GE++P L +R DL +A + N +P +G P L C L P
Sbjct: 7 NFTGGEVTP-TLSARYDLGRYANSLKIMENFLPNLHGDAYRRPGTYFLENLGEGCVLLP- 64
Query: 66 SNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAV 125
FSF+ G L FG+K L+IV V + + ++PY D + YA
Sbjct: 65 ----FSFNAEAGQNFALAFGEKSLRIVNVNGY------VVAEAMESPYALADVPEISYAQ 114
Query: 126 FGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKF---------LPPPWLGDG------- 169
G HKD+ H ++ +++ + W G G
Sbjct: 115 VGDVVYLAHKDYALHKVVRTGSAPAYAWSIGTVALNTSLAAPAAPTAAWQGGGGSYTLRY 174
Query: 170 MISGVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYI 229
+S V ++ K S+ A STA G +P +W + + +
Sbjct: 175 KVSAVDADGKESLPSAVGSTAS-------------------GKYPTDWTEGNHCVLSWQA 215
Query: 230 V---ADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPY 286
V A+ +YR + G G G ++G ++ N A A P
Sbjct: 216 VEGAAEYNIYRE-SAGYYG-FIGIAQGTSFDDQNY----------------EADIADTPK 257
Query: 287 YVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFS 346
W D + G +++ Q L S S++MS G+ E F +R L
Sbjct: 258 EDWDPFADGNNPG-TVTFHQQRMVLAGTRNSPQSFYMSRTGDFE------NFRKSRPL-- 308
Query: 347 GSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVG 406
D + L+S ++DG I W FG+ +L+G
Sbjct: 309 -QDDDPVEYQLAS------GTVDG----------------------IVWAASFGD-LLLG 338
Query: 407 CDTSLWLLS----ISLSKGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGS 462
++ + + +K +I + GS A P+ +G+ ++ G R++ + S
Sbjct: 339 TASAEYKATGDNGAITAKNCTITAQSYWGSAKIA--PIIIGNSVMHCQRHGSRVRDLYYS 396
Query: 463 TEQ-GFRFNEITQLADHLFN-QRILQLVYQEEPHSIVWVV 500
E+ G+ N+++ LA HLF+ I Q +Q+ P S++W+V
Sbjct: 397 LEKDGYAGNDLSVLAPHLFDGHTIRQWAFQQTPGSVLWLV 436
>gi|225157020|ref|ZP_03724959.1| hypothetical protein ObacDRAFT_8085 [Opitutaceae bacterium TAV2]
gi|224802748|gb|EEG20999.1| hypothetical protein ObacDRAFT_8085 [Opitutaceae bacterium TAV2]
Length = 773
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 115/547 (21%), Positives = 203/547 (37%), Gaps = 80/547 (14%)
Query: 9 HSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNR 68
++F+AGE +P+L R DL + + N+ + YG + +R
Sbjct: 7 NNFTAGEWTPKL-DGRSDLQKYDAACRRLENMRVMPYGGARFRSAFGYVAKTKSAATPSR 65
Query: 69 VFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVFGS 128
+ F +L + L++ S +PAL + +PY +++Y
Sbjct: 66 LMPFQFSTEQKFMLEWAHLALRVY----SAGAAPALL-QEIASPYPAAAVFAIQYRQIND 120
Query: 129 TAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQADTS 188
VH D+P L D D + + + + PP L + + + KLS+S D
Sbjct: 121 VVYLVHPDYPVQRLARHADAD---WRLEAVDWAFPPMLDENV-----TETKLSLSAVDGV 172
Query: 189 TARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSI-----GAYIVADDKVYRSLTTGR 243
+T+ +F+P G L H E A +T+ S+ G + A V T
Sbjct: 173 NVTMTASAALFQPGHVGSYWELR-HLKE-AASTSVSLATTSGGPFHSAAISVQGDWT-AN 229
Query: 244 SGDRFGYSKGATYVKDNNITWITVLNLSSKTSRE-SASG--------------------- 281
S +R+ + D TW TV ++++ R SASG
Sbjct: 230 STERWYGTLSIERSLDGGTTWETVRKFTAESDRNISASGHQEELAQFRLKYQPTGDPFGA 289
Query: 282 ----AVAP--------------YYVWGDIKDVS-KDGRSISVAPQSQTLFQAGVSVVSWF 322
AP YV +K + D + V + A + W
Sbjct: 290 GVWVGKAPTNYVKARAMLETTDAYVTALVKVTAYTDSTHVKVTVIDKAATVAATDI--WC 347
Query: 323 MSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALT 382
SAW G+P + + RL+F G++ +++ S F +F +YG D
Sbjct: 348 ESAWSPYRGFPRTIGLYEQRLIFGGTRHQPNTMWGSKTDDFENF----KYGEDDDAAVAY 403
Query: 383 TAVTDFSAS---TIHWMHPFGEGVLVGCDTSLWLLSISLSKGLS---IDFRRVSGSGVYA 436
T F+AS + W+ + + + + L+ I R S +G
Sbjct: 404 T----FAASEQNNVQWVESLKRIQAATTAREFTVAAGNTDEPLTPSNIVVRSESANGAAH 459
Query: 437 CPPVSVGDCLVFVCGVGRRIKYISGSTEQ-GFRFNEITQLADHLFNQRILQLVYQEEPHS 495
PV V D +++V R++ ++ S E+ G+ ++T LA + + QL + +P
Sbjct: 460 LQPVLVNDAILYVERQSRKVMEMAYSIEKDGYASVDLTLLAAPVTESGVKQLAFARQPDP 519
Query: 496 IVWVVLE 502
++ V E
Sbjct: 520 LLLAVTE 526
>gi|212703239|ref|ZP_03311367.1| hypothetical protein DESPIG_01281 [Desulfovibrio piger ATCC 29098]
gi|212673505|gb|EEB33988.1| hypothetical protein DESPIG_01281 [Desulfovibrio piger ATCC 29098]
Length = 694
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 102/241 (42%), Gaps = 28/241 (11%)
Query: 328 EQEG-YPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTK---ALTT 383
E EG YPS V FH RL F+ S ++++LS G F + P K A+
Sbjct: 270 EGEGNYPSQVFFHQQRLGFAASNSRPITIWLSRSGEFESMAKS------TPPKDDDAIEV 323
Query: 384 AVTDFSASTIHWMHPFGEGVLVGCDTSLWLLS----ISLSKGLSIDFRRVSGSGVYACPP 439
+ AS I W+ P + G + S W L ++L+ + + + G A
Sbjct: 324 TLAATQASRIVWLQPDRSALAFGTEGSEWTLEPSEGVALTPATASFQLQTTNGGSDAVAA 383
Query: 440 VSVGDCLVFVC-GVGRRIKYISGSTEQGFRFNEITQLADHLFNQ-RILQLVYQEEPHSIV 497
+SVG +++V G G ++ + + ++ LA H+ ++ +Q+EP++++
Sbjct: 384 LSVGGSVLYVQRGAGAIREFAYNYSADKYLGQDLNILARHMLRDVDVVAWSWQQEPYAVL 443
Query: 498 WVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMIS-DKHYVLSAASFPNDNRGGTSLWML 556
W VL S L G + E E WH H + D V P+D +W L
Sbjct: 444 WSVL-----SDGTLAGLTYMKEQE-IVGWHRHTTAGDFVDVAGIPGTPDDQ-----VWFL 492
Query: 557 V 557
V
Sbjct: 493 V 493
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Query: 7 TKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRS 66
T++ + GE+SP LL+ R D ++ G + RN +P+ G + P + D
Sbjct: 6 TQNVLNGGEISP-LLRGRVDQPRYSTGAREMRNFVPMPQGGVTRRPGTRYLGTALGDGGR 64
Query: 67 NRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVF 126
F FS G +L FGD+ +++ + K +++P+ D +++ YA
Sbjct: 65 LVPFVFSATQG--RMLEFGDRAMRVWLPDGRVVADEEGAPKIFESPFAAADLRAVRYAQS 122
Query: 127 GSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLP 162
F H + P L D D + + E+ F+P
Sbjct: 123 ADVIYFAHPGYAPRKLARHADDD---WRWSELTFMP 155
>gi|167041089|gb|ABZ05850.1| hypothetical protein ALOHA_HF400048F7ctg1g17 [uncultured marine
microorganism HF4000_48F7]
Length = 999
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 119/277 (42%), Gaps = 43/277 (15%)
Query: 314 AGV-SVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFS----L 368
AGV + W + ++ GYP V + RL+F+G+ + +++ S F++FS L
Sbjct: 428 AGVGATTEWQLGSFSGTTGYPRTVQLYQQRLVFAGTAEESQTIFFSKTADFFNFSATEPL 487
Query: 369 DGEYGCYDPT------------KALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSI 416
+ G D + A++ ++ + I W+ + + +G ++ L
Sbjct: 488 GQQTGQRDSSGRSIVGEQIFEDAAISLTISSDTVDQIEWISE-DQRLTIGTSGGIYQLYG 546
Query: 417 SLSKGLSIDFR-RVSGSGVYACPPVS----VGDCLVFVCGVGRRIKYIS-GSTEQGFRFN 470
S F ++ +AC P + VG+ L++V GR+++ ++ + +
Sbjct: 547 STDDLTLTPFNFSITKVSAWACDPTALPAKVGNNLLYVQNNGRKLRELAFDKVQDQYSAA 606
Query: 471 EITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHM 530
++T ++ + ++ YQ++P+S++W + RL G + + AWH H
Sbjct: 607 DLTLRSEDISESGLIATAYQDQPYSVLWCLRNDG-----RLAGLTY-VDLLQMRAWHRHT 660
Query: 531 ISDKHY---------VLSAASFPNDNRGG-TSLWMLV 557
I HY V S AS P RG L+M+V
Sbjct: 661 IGGAHYDDTHGSQAKVESIASIP---RGTHDQLYMIV 694
>gi|220918520|ref|YP_002493824.1| hypothetical protein A2cp1_3428 [Anaeromyxobacter dehalogenans
2CP-1]
gi|219956374|gb|ACL66758.1| hypothetical protein A2cp1_3428 [Anaeromyxobacter dehalogenans
2CP-1]
Length = 825
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 139/576 (24%), Positives = 211/576 (36%), Gaps = 117/576 (20%)
Query: 8 KHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVS---MPLMQEYRD----- 59
+ SF+AGEL PRL R DL+ + G+ ++RN G ++ P ++E +D
Sbjct: 8 QGSFAAGELGPRL-HGRHDLAKYQVGLRRARNFFLSPEGAALNRPGTPFVREAKDSAAGV 66
Query: 60 ---CRLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYK--TPYT 114
RL P F FS G L FG ++ V +T P + Y+ TPY
Sbjct: 67 DRGARLIP-----FIFSEDLGQAYELEFGQGYVRFHV-GGATIADPLNSAQPYELATPYL 120
Query: 115 FKDNKSLEYAVFGSTAVFVHKDHPPHHL--LYIQDGDKISFTFDEIKFLPPP----WLGD 168
D L+YA G K + P L L + + +FD +P P +LG
Sbjct: 121 AADLPRLKYAQQGDVVTLTCKGYDPRELRRLAHDSWELVPLSFD----VPAPNGVVYLGV 176
Query: 169 GMISGVKSNAKLSISQADTSTARITSDMKIFK----PLDKGRSIRLGCHPPEWAKNTNYS 224
+ V ++A Q I D + PL + R I +G W Y
Sbjct: 177 EALENV-ADATHPARQWAWQVTEIWEDESGLQWETSPL-RVRKIAVGAGA-TWHTGFTYP 233
Query: 225 IGAYIVADDKVYRSLTTGRSGD-----RFGYSKGATY--------------VKDNNITWI 265
+GA + + ++S+ G G ATY V ++N
Sbjct: 234 LGACVSYAGQFWQSVIADNRGHVPEAVMVGDPPAATYPYWTPVGAVPDPFAVYESNAPTD 293
Query: 266 TVLNLSSKTSRESASGA-----------------------------VAPYYVWGDIKDVS 296
VL +T + ASGA VA + GD D+S
Sbjct: 294 VVL-FPDRTIKLWASGAWTGVDGSRLVGRRVYRGRGTVFGYVGEFEVAEFRDTGDTPDLS 352
Query: 297 KDGRSISVAPQSQ---TLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDEL 353
PQ + T+F VV EQ PS VTFH R G+
Sbjct: 353 YS------PPQGRNPFTVFGPAGEVVRL------EQ---PSVVTFHAERRSLLGTAQRPA 397
Query: 354 SVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWL 413
+LS G +Y+F D A + + W +L+G + +W
Sbjct: 398 HAFLSRTGDYYNFDRHTPALVDD---AFELELAGRLREEVRWAV-GAAALLIGTQSGVWA 453
Query: 414 LSIS----LSKGLSIDFRRVSGSGVYACP---PVSVGDCLVFVCGVGRRIK-YISGSTEQ 465
+ L G + + S Y P P +VGD +++V G ++ + Q
Sbjct: 454 IRPPSGEVLGPGKATAVPQSSAGSSYLDPLVVPSAVGDAVLYVRTKGSGVRDLVYDDGRQ 513
Query: 466 GFRFNEITQLADHLFNQ-RILQLVYQEEPHSIVWVV 500
GF ++++ LA HLF I +QE+P S+ W+V
Sbjct: 514 GFVGSDLSLLAKHLFTGYSIKAWTFQEDPWSVAWLV 549
>gi|320175038|gb|EFW50151.1| 12 [Shigella dysenteriae CDC 74-1112]
Length = 799
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 110/504 (21%), Positives = 204/504 (40%), Gaps = 71/504 (14%)
Query: 27 LSLHAQGVAKSRNLIPLRYGPLVSMPLMQ-------EYRDCRLDP-RSNRVFSFSIPDGG 78
++ + + K N I +YG + + P + R CRL P + + V ++++ G
Sbjct: 1 MAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFSTVQTYALEFGH 60
Query: 79 YALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVFGSTAVFVHKDHP 138
+ V D L V+ S+ + A TPYT D +++ VH +P
Sbjct: 61 QYMRVIKDGAL--VLNSSNVIYEIA-------TPYTEADLFRIKFTQSADVLTLVHPAYP 111
Query: 139 PHHLL-YIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSI-SQADTSTARITSDM 196
P L Y D ++ + +G + + +++ + A T T +T+
Sbjct: 112 PKELRRYAHDNWQLVDVVTK----------NGPFEDINIDESVTVYASASTGTITLTASA 161
Query: 197 KIFKPLDKGRSIRLGCHP-----PEWAKNTNYSIGAYIVADDKVYRSLTTGRSGD-RFGY 250
IF G+ L P P W + + SIG AD YR++T G++G R +
Sbjct: 162 SIFGAEQVGKLFYLE-QPAVDSVPVWETSKSTSIGDIRRADSNYYRAVTAGKTGTLRPSH 220
Query: 251 SKGATYVKD-------NNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSIS 303
++G ++ I W L+ +R +A+ IS
Sbjct: 221 TEGTSWDGWGGSGDDDTGIEW-EYLHSGFGIARITAANGTT------------ATAEVIS 267
Query: 304 VAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAF 363
P SQ + + S W W GYP V ++ RL F+ S +++ S G +
Sbjct: 268 YIP-SQVVGEDNASY-KWAKYTWNSVNGYPGTVVYYQQRLYFAASTAFPQTIWASRTGDY 325
Query: 364 YDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM-HPFGEGVLVGCDT-SLWLLSISLSKG 421
DF G +PT+ + ++ ++ + H G LV + ++++ +K
Sbjct: 326 KDF------GKSNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEYVITGDQNKV 379
Query: 422 L---SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLAD 477
L S F +G PP++V + +FV G ++ ++ S + G++ N++T LA+
Sbjct: 380 LTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTILAN 439
Query: 478 HLFNQR-ILQLVYQEEPHSIVWVV 500
HLF + I+ + P+S + +
Sbjct: 440 HLFQKHSIVDWCFSIVPYSSAFCI 463
>gi|118590938|ref|ZP_01548338.1| hypothetical protein SIAM614_19796 [Stappia aggregata IAM 12614]
gi|118436460|gb|EAV43101.1| hypothetical protein SIAM614_19796 [Stappia aggregata IAM 12614]
Length = 810
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 13/185 (7%)
Query: 321 WFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKA 380
W + AW G+P + +H NRL F+G+ + ++ S F +FS+ D A
Sbjct: 386 WRLGAWSGTTGWPETIGWHKNRLAFAGTSEEPQKIWESQTEDFTNFSVSHVLKASD---A 442
Query: 381 LTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKG----LSIDFRRVSGSGVYA 436
+T + + I W+ + ++VG ++ + + + ++D + + G
Sbjct: 443 VTAGILSGQVNRIQWLVDDND-LIVGTTRAVRAVGKATDQDPYGPENVDQKPETNFGAND 501
Query: 437 CPPVSVGDCLVFVCGVG---RRIKYISGSTEQGFRFNEITQLADHLFNQRILQLVYQEEP 493
P+ VG L++ G R + Y GS G ++++ HLF I YQ+ P
Sbjct: 502 VSPIKVGSVLIYYGPYGTDMREMAYDFGS--DGRVSQAVSEVQSHLFQSGIAGACYQQYP 559
Query: 494 HSIVW 498
S++W
Sbjct: 560 DSVIW 564
>gi|85059168|ref|YP_454870.1| hypothetical protein SG1190 [Sodalis glossinidius str. 'morsitans']
gi|84779688|dbj|BAE74465.1| hypothetical phage protein [Sodalis glossinidius str. 'morsitans']
Length = 662
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 15/186 (8%)
Query: 324 SAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSL----DGEYGCYDPTK 379
S W + GYP VT + RL+ +GS +++ S GA+ F L D +
Sbjct: 255 SVWTDNLGYPGAVTLYQQRLVLAGSPKYPQTIWWSETGAYLSFELGTKDDAAISFTLSSD 314
Query: 380 ALTTAVTDFSASTIHWMHPFGEGVLV-GCDTSLWLLSISLSKGLSIDFRRVSGSGVYACP 438
L V +T+ + GE + G D ++ +IS+ + S G
Sbjct: 315 QLNPIVHLAQMNTLIALTYGGEFTITSGNDAAITPTNISV--------KNPSPYGCNRIR 366
Query: 439 PVSVGDCLVFVCGVGRRIKYISGSTEQ--GFRFNEITQLADHLFNQRILQLVYQEEPHSI 496
P+ VG ++F+ GR++ ++ + + N++T LA+H+ + + YQ++P +
Sbjct: 367 PLRVGTEILFIQRAGRKLYAVAYDPDSFVSYAANDLTVLAEHITAGGVRDMAYQQQPDGL 426
Query: 497 VWVVLE 502
+W+V E
Sbjct: 427 IWLVRE 432
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 80/197 (40%), Gaps = 21/197 (10%)
Query: 8 KHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSN 67
K +F+AGE+SPRL+ R D+ +A G +N + + G ++ P + + R
Sbjct: 7 KTNFTAGEVSPRLM-GRVDIMRYANGAKAIQNGVVVVQGGVMRRPGTRFAAAAKYSDRPA 65
Query: 68 RVFSFSIPDGGYALLVFGDKKLQI------VVVRSSTKWSPALFGKTYKTPYTFKDNKSL 121
R+ + +L FGD L++ VV ++T + A +PY+ S+
Sbjct: 66 RLIPYVFNRSQAYVLEFGDGYLRVYQKGKPVVNANNTPYEIA-------SPYSADRLPSV 118
Query: 122 EYAVFGSTAVFVHKDHPPHHLL-------YIQDGDKISFTFDEIKFLPPPWLGDGMISGV 174
Y T VH P+ L ++ I FDEI+ P W V
Sbjct: 119 NYVQGADTMFLVHPAVKPYRLQRRGQTDWVLEPAPFIVEPFDEIRETPKKWCRPSAKEFV 178
Query: 175 KSNAKLSISQADTSTAR 191
S L++S AD R
Sbjct: 179 GSEVTLTLSDADPGENR 195
>gi|295096862|emb|CBK85952.1| hypothetical protein ENC_24250 [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 662
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 23/188 (12%)
Query: 324 SAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTT 383
S W + GYP VT + RL+ +GS +++ S G + F E G D T
Sbjct: 255 SVWTNEFGYPGAVTLYQQRLVLAGSPKYPQTIWWSETGVYLSF----EIGTEDDDAISFT 310
Query: 384 AVTDFSASTIHW--MHPF------GEGVLV-GCDTSLWLLSISLSKGLSIDFRRVSGSGV 434
+D +H M+ GE + G D ++ +IS+ + S G
Sbjct: 311 LSSDQLNPIVHLAQMNTLIALTYGGEFTITSGNDAAITPTNISV--------KNPSPYGC 362
Query: 435 YACPPVSVGDCLVFVCGVGRRIKYISGSTEQ--GFRFNEITQLADHLFNQRILQLVYQEE 492
PV VG ++FV GR++ ++ + + N++T LA+H+ +L + YQ++
Sbjct: 363 NGIRPVRVGTEIMFVQRAGRKLYAVAYDPDSFVSYSANDMTVLAEHITAGGVLDMAYQQQ 422
Query: 493 PHSIVWVV 500
P + +W+V
Sbjct: 423 PDAFIWMV 430
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 21/192 (10%)
Query: 8 KHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSN 67
K +F+AGE+SPRL+ R D++ +A G N + + G +V P + + + +
Sbjct: 7 KTNFTAGEVSPRLM-GRVDIARYANGAKIIENAVVVVQGGVVRRPGTRFAAATKHGDKKS 65
Query: 68 RVFSFSIPDGGYALLVFGDKKLQI------VVVRSSTKWSPALFGKTYKTPYTFKDNKSL 121
R+ + +L FGD ++I +V +T + A +PYT ++
Sbjct: 66 RLIPYVFNRSQAYMLEFGDGYMRIFQNGKQLVNEDNTPYEIA-------SPYTADMLPAV 118
Query: 122 EYAVFGSTAVFVHKDHPPHHLL-------YIQDGDKISFTFDEIKFLPPPWLGDGMISGV 174
Y T VH+ PH L ++ I FDE++ P W + V
Sbjct: 119 NYVQGADTMFLVHQSVKPHRLQRRGQTDWVLEPAPFIVEPFDEVRDTPQKWCKPSVKEFV 178
Query: 175 KSNAKLSISQAD 186
S L++S AD
Sbjct: 179 GSEITLTLSDAD 190
>gi|262043403|ref|ZP_06016528.1| hypothetical protein HMPREF0484_3546 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039229|gb|EEW40375.1| hypothetical protein HMPREF0484_3546 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 664
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 15/184 (8%)
Query: 324 SAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSL----DGEYGCYDPTK 379
S W ++ GYP VT + RL+ +GS +++ S G + F L D +
Sbjct: 257 SVWTDEFGYPGAVTLYQQRLVLAGSPRYPQTIWWSESGVYLSFELGTDDDDAISFTLSSD 316
Query: 380 ALTTAVTDFSASTIHWMHPFGE-GVLVGCDTSLWLLSISLSKGLSIDFRRVSGSGVYACP 438
L V +T+ + GE + G D ++ +IS+ + S G
Sbjct: 317 QLNPIVHLAQMNTLIALTYGGEFTITAGNDAAITPTNISV--------KNPSPYGCNGIR 368
Query: 439 PVSVGDCLVFVCGVGRRIKYISGSTEQ--GFRFNEITQLADHLFNQRILQLVYQEEPHSI 496
PV VG ++FV GR++ ++ + + N++T LA+H+ ++ + YQ++P +
Sbjct: 369 PVRVGTEIMFVQRSGRKLYAVAYDPDSYVAYSANDMTVLAEHITEGGVIDMAYQQQPDAF 428
Query: 497 VWVV 500
W+V
Sbjct: 429 TWLV 432
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 21/189 (11%)
Query: 8 KHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSN 67
K +F+AGE+SPRL+ R D+ +A G N + + G ++ P Q + + +
Sbjct: 7 KTNFTAGEISPRLM-GRVDIDRYANGAKTLENSVVVVQGGVMRRPGSQFVAATKYGDKKS 65
Query: 68 RVFSFSIPDGGYALLVFGDKKLQI------VVVRSSTKWSPALFGKTYKTPYTFKDNKSL 121
R+ + +L FGD L+I +V +T + A +PYT S+
Sbjct: 66 RLIPYVFNRTQAYILEFGDGYLRIYQDGKQLVNDDNTPYEIA-------SPYTSDMLPSV 118
Query: 122 EYAVFGSTAVFVHKDHPPHHLL-------YIQDGDKISFTFDEIKFLPPPWLGDGMISGV 174
Y T VH+D P+ L ++ I FDE++ P W + V
Sbjct: 119 NYVQGADTMFLVHQDVKPYRLQRRGQTDWVLEPAPFIVEPFDEVRDTPQKWCKPSVKEFV 178
Query: 175 KSNAKLSIS 183
S L++S
Sbjct: 179 GSEITLTLS 187
>gi|303328570|ref|ZP_07359005.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
gi|302861336|gb|EFL84275.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
Length = 696
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 101/237 (42%), Gaps = 19/237 (8%)
Query: 332 YPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSAS 391
+PS V FH RL ++ + ++++LS G DF + A+ + A+
Sbjct: 277 WPSQVFFHQQRLGWAATANRPITIWLSRPG---DFEIMAASTPPKDDDAIEATLAATQAN 333
Query: 392 TIHWMHPFGEGVLVGCDTSLWLLSISLSKGLS---IDFR-RVSGSGVYACPPVSVGDCLV 447
I W+ P + + G + S W LS L+ + F + + G A VSVG ++
Sbjct: 334 RIVWLQPDRQSLTFGTEGSEWTLSAGEGVALTPSNVSFEMQTANGGDNATQAVSVGGGVL 393
Query: 448 FVCGVGRRIKYIS-GSTEQGFRFNEITQLADHLFNQRILQL-VYQEEPHSIVWVVLEPKD 505
++ G+ ++ + + + ++T LA H+ ++ +Q+EP++++W L
Sbjct: 394 YLQRGGKAVRQFAYNYSADKYLGQDVTILARHILRDAVVTAWAFQQEPYAVLWCAL---- 449
Query: 506 NSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVALSAG 562
S L G + E + WH H + ++A D++ W LV G
Sbjct: 450 -SDGTLAGLTYMPE-QDVMGWHRHDTDGRFEDVAAMPGTPDDQ----TWFLVRRGCG 500
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 8 KHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPL-----MQEYRDCRL 62
++ + GE++P L++ R D + G + RN +P+ G + P M RL
Sbjct: 7 QNVLNGGEITP-LMRGRVDQPRYGTGAREMRNFVPMPQGGVTRRPGTRFLGMAHGDAARL 65
Query: 63 DPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLE 122
P F FS G +L FGDK L++ + K +++PY D L
Sbjct: 66 IP-----FVFSATQG--RMLEFGDKTLRVWLPDGRLVADENGEPKVFESPYAVGDLHELR 118
Query: 123 YAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLP 162
+A H+ + P L D D + + E+ F+P
Sbjct: 119 FAQSADVVYLAHQGYAPRRLSRHADDD---WRWSELAFVP 155
>gi|262043657|ref|ZP_06016766.1| hypothetical protein HMPREF0484_3785 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259038995|gb|EEW40157.1| hypothetical protein HMPREF0484_3785 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 758
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 133/610 (21%), Positives = 220/610 (36%), Gaps = 110/610 (18%)
Query: 8 KHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSN 67
K SF+AG LSP ++ + D A V +N IPL GP Q + S+
Sbjct: 8 KRSFNAGILSP-VMYGQVDFDKWASAVKYMKNFIPLPQGPARRRGGTQYAGSVK--NSSD 64
Query: 68 RV----FSFSIPDG-------GYALLVFGDKKL---QIVVVRSSTKWSPALFGKTYKTPY 113
RV F FS + GY F +L + ++ ST W + K
Sbjct: 65 RVWLASFQFSTTEAFILEFGPGYIRFWFNHAQLLDDENNILEVSTPWGAGDLTRNGKFGL 124
Query: 114 TFKDNKSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLG-DGMIS 172
+ + + + Y + ++P + L +++ E F P+ + S
Sbjct: 125 SLQQSADVIYITC------TNGNYPVYKLTR---NTNTNWSLAEASFSGGPFADINSDKS 175
Query: 173 GVKSNAKLSISQAD-----------TSTARITSDMKIFKPLDKGRSIRLGC--------- 212
V + I D TS IT++ IF+ L G +
Sbjct: 176 SVVYTDQFRIWSEDGNDLPDGTPTTTSLCNITANTDIFQALHVGCLFYIEASTDAVDDDT 235
Query: 213 ----HPPEWAKNTN--YSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWIT 266
+ P WA T +S G + +D K Y + ++G+ TW
Sbjct: 236 GHSGYIPAWAAGTTETFSTGVFCRSDGKYYEDMDGTKTGN-------------TQPTW-- 280
Query: 267 VLNLSSKTSRESASGAVAPYYV----WGDIK------DVSKDGRSISVAPQSQTLFQAGV 316
++ R+ + G + + WG I+ S G+ ++ P S +
Sbjct: 281 ----TAGAHRDGSGGDASLWRYSGGGWGIIEITAVNSATSATGKIVTELPPS--VRNTVG 334
Query: 317 SVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYD 376
+ W + YP F RL+F+G + ++ S G +FS +
Sbjct: 335 KTYKYAFGDWSDVLRYPQFAAFFRGRLVFAGRQ----KIWSSVAGDLQNFSPMTNGYEAE 390
Query: 377 PTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLW------LLSISLSKGLSIDFRRVS 430
++ + D + T+ W+ + +G + L S+ + ++
Sbjct: 391 SDDSINDRIDD-TQDTMQWLVASAGKIFIGTAGYEFSYGEQSLTSVFGAGNTKVELNSTI 449
Query: 431 GSGVYACPPVSVGDCLVFVCGVGRRI---KYISGSTEQGFRFNEITQLADHLFNQRILQL 487
GS + D + FV GR++ Y SGS F LA HLF I+ L
Sbjct: 450 GSNEVQAE--RLFDRVAFVQRAGRKVMIAAYDSGS--DSFSATNSCILAPHLFTSEIIAL 505
Query: 488 VYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDN 547
YQ+EP+ I+WV+LE +LLG + AE + WH H V S P+ +
Sbjct: 506 AYQQEPNRILWVLLEEG-----KLLGLTYDAE-QNITGWHEHATGGA--VESIKVIPDID 557
Query: 548 RGGTSLWMLV 557
G LWM+V
Sbjct: 558 GGRDELWMVV 567
>gi|290968641|ref|ZP_06560179.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str.
28L]
gi|290781294|gb|EFD93884.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str.
28L]
Length = 1039
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
Query: 316 VSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCY 375
V V ++ S+W ++ GYP F +RL+F+G+K + S++ S G + +FS++ G
Sbjct: 570 VPVDAFAFSSWNDRNGYPKLSCFFQDRLVFAGTKKEPYSLWFSRTGDYNNFSVEKAEGTV 629
Query: 376 DPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGLSIDFRRV-SGSGV 434
A+ + + I + P + ++V + W++S + + +V + G
Sbjct: 630 TEDSAIKLDLIVRNLYEIRHLVPSND-LIVLTSGNEWIISGDTAITPTKCTPKVQTMRGA 688
Query: 435 YACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLADHLFNQ-RILQLVYQEE 492
C P +G+ L++V G I+ S + + +E+ A HL + +++ Y +
Sbjct: 689 SNCKPWHIGNRLIYVQRDGGTIRDFGYSYDSDNYNGDELNLFASHLTKRHQMVSSAYCQN 748
Query: 493 PHSIVWVVLE 502
P+S ++ V E
Sbjct: 749 PYSTLYFVRE 758
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 79/187 (42%), Gaps = 18/187 (9%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M N T++SF+ GE+SP + + R DL + + ++ N + YG + +
Sbjct: 1 MQNVFITQNSFTTGEISPEVAE-RTDLEKYKSALLQAENAVVSPYGSVSRRTGSKYIGAI 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
+ + + F LL G K +++ W + TP+ + K
Sbjct: 60 KYADKEAVLVPFMDSSDRSYLLEVGYKYIRV--------WKDETMEQEIDTPFEYP--KE 109
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL 180
L + G TA +P + LL+ + + F +P P+ D +IS +++ + +
Sbjct: 110 LNFTQSGDTAFICSGRYPVYELLHGRYWELRKFD------IPKPYF-DDIISAIENVSDV 162
Query: 181 SISQADT 187
+ +++DT
Sbjct: 163 NYTESDT 169
>gi|298485990|ref|ZP_07004064.1| predicted phage protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298159467|gb|EFI00514.1| predicted phage protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 716
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 88/182 (48%), Gaps = 12/182 (6%)
Query: 324 SAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTT 383
S W + +GYPS T + RL+ +GS +++ S G + +F E G D A++
Sbjct: 311 SVWNDFDGYPSTGTLYEQRLVAAGSPNYPQTIWESRTGEYLNF----ELGTKD-DDAMSF 365
Query: 384 AVTDFSASTIHWMHPFGEGVLVGCD-TSLWLLSISLSKGLSIDFRRVSGSGVYACP---P 439
V+ + I MH LV + ++ + K ++ ++ VY C P
Sbjct: 366 NVSSDQINPI--MHVGQVKALVTLTYGGEFTVTGGVEKPITPTNIQIKNQSVYGCNGVRP 423
Query: 440 VSVGDCLVFVCGVGRRIKYISGSTEQ-GFRFNEITQLADHLFNQRILQLVYQEEPHSIVW 498
+ +G+ L FV GR+++ ++ + + +++ L++H ++ + +Q+EP SI++
Sbjct: 424 IRIGNELYFVQRAGRKLRAMAYKYDSDSYGSPDMSVLSEHATKSGVVDMAFQQEPESILF 483
Query: 499 VV 500
+V
Sbjct: 484 MV 485
>gi|291334457|gb|ADD94111.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1161]
Length = 206
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 423 SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLADHLFN 481
+I ++ S +G ++VG+ +F+ R+++ ++ + + G+ ++T LA+H+
Sbjct: 30 NILIKKQSNNGAANVDALAVGNATLFLQRARRKLRELAYNFDVDGYVAPDLTILAEHISE 89
Query: 482 QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAA 541
QL YQ+EP+ ++W V +L+G + E + AWH H+ S A
Sbjct: 90 GGFKQLSYQQEPNQVIWGVRND-----GQLVGLTYQRE-QQVVAWHRHIFGGSAVCESVA 143
Query: 542 SFPNDN 547
+ P D+
Sbjct: 144 TIPTDD 149
>gi|291334666|gb|ADD94313.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C695]
Length = 189
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 423 SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLADHLFN 481
+I ++ S +G ++VG+ +F+ R+++ ++ + + G+ ++T LA+H+
Sbjct: 31 NILIKKQSNNGAANVDALAVGNATLFLQRARRKLRELAYNFDVDGYVAPDLTILAEHISE 90
Query: 482 QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAA 541
QL YQ+EP+ ++W V +L+G + E + AWH H+ S A
Sbjct: 91 GGFKQLSYQQEPNQVIWGVRNDG-----QLVGLTYQRE-QQVVAWHRHIFGGSAVCESVA 144
Query: 542 SFPNDN 547
+ P D+
Sbjct: 145 TIPTDD 150
>gi|54302254|ref|YP_132247.1| hypothetical protein PBPRB0574 [Photobacterium profundum SS9]
gi|46915675|emb|CAG22447.1| hypothetical protein PBPRB0574 [Photobacterium profundum SS9]
Length = 919
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 10/192 (5%)
Query: 317 SVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYD 376
S W + W GYP T+ RL + + +V+LS +F DFS D
Sbjct: 408 STYKWAIEIWRNSTGYPRCGTYFQQRLSMANTISHPQTVWLSRTDSFNDFSKTRPILADD 467
Query: 377 PTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGLSID----FRRVSGS 432
++ + + I + P +L+ LW L+ S + + +
Sbjct: 468 ---SMRYDINSLQVNEIFNIVPL-NSLLLFTSGGLWSLAQDQQGAFSAESPPSVKMQNYE 523
Query: 433 GVYACPPVSVGDCLVFVCGVGRRIKYISGS-TEQGFRFNEITQLADHLF-NQRILQLVYQ 490
G P+ G ++V R ++ I S + F ++T A HLF ++R+++ Y
Sbjct: 524 GANKLRPIVAGSTAIYVQQGDRIVRDIQFSWSSDSFEGVDLTVRASHLFKHKRVVEWAYA 583
Query: 491 EEPHSIVWVVLE 502
+ P ++WV+ +
Sbjct: 584 KNPDKLIWVIFD 595
>gi|146276492|ref|YP_001166651.1| hypothetical protein Rsph17025_0440 [Rhodobacter sphaeroides ATCC
17025]
gi|145554733|gb|ABP69346.1| hypothetical protein Rsph17025_0440 [Rhodobacter sphaeroides ATCC
17025]
Length = 754
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 15/195 (7%)
Query: 315 GVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDG--EY 372
GV W AW ++ GYPS V + RL + + + +V+ S+ G F DF LDG +
Sbjct: 308 GVPTYRWSEGAWSKRYGYPSTVEIYEQRLAAAATPSEPRTVWFSAVGDFQDF-LDGTEDD 366
Query: 373 GCYDPTKALTTAVTDF-----SASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGLSIDFR 427
+ T A +T+V A+ +H + GE +T ++ + F
Sbjct: 367 QSFAYTVAGSTSVNRIINLQRGAAGLH-IFALGEEYSTRSETRSSVIGPK-----NAVFG 420
Query: 428 RVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEI-TQLADHLFNQRILQ 486
SG G P++ +F+ +R+ + S +Q + + ++ A H+ Q
Sbjct: 421 LDSGVGSSTAKPITPSGNPIFISRDRKRVLEMVYSLDQDRPVSRVLSRTAQHVGGAGFEQ 480
Query: 487 LVYQEEPHSIVWVVL 501
+V+Q P W+ L
Sbjct: 481 IVWQAAPEPTAWLRL 495
>gi|226940469|ref|YP_002795543.1| hypothetical protein LHK_01546 [Laribacter hongkongensis HLHK9]
gi|226715396|gb|ACO74534.1| hypothetical protein LHK_01546 [Laribacter hongkongensis HLHK9]
Length = 874
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 114/271 (42%), Gaps = 22/271 (8%)
Query: 268 LNLSSKTSRESASGAVAPYYVWGDIKDVSK-DGRSISVAPQSQTLFQAGVSVVSWFMSAW 326
+ L+ S + A+ P + G I V+ +G S AP + G S ++
Sbjct: 399 VQLAVTDSGGGSGAALEPVIIDGAITAVNVINGGSGYFAPVVSVSYAGGGSGATFGQPVV 458
Query: 327 GEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTK---ALTT 383
YP V++ R F+G+ +++++ G + G P + +
Sbjct: 459 KSSGDYPGAVSYFEQRRCFAGTTRKPQNIWMTKSGT------ESNMGYSLPVRDDDRIAF 512
Query: 384 AVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGL---SIDFRRVSGSGVYACPPV 440
V+ A+TI + P + +L+ ++ W ++ S + SI R S G PV
Sbjct: 513 RVSAREANTIRHIVPLAQ-LLLLTSSAEWRVTSVNSDAITPRSISVRPQSYIGASNVQPV 571
Query: 441 SVGDCLVFVCGVGRRIKYISGSTEQ-GFRFNEITQLADHLFNQ-RILQLVYQEEPHSIVW 498
+ + L++ G ++ ++ + + GF +++ A HLF+ I+ + + + P +VW
Sbjct: 572 IINNTLIYASARGGHVRELAYNWQAGGFVTGDLSIRAPHLFDDFEIVDMAFGKSPQPVVW 631
Query: 499 VVLEPKDNSFPRLLGCRFSAEGEGDFAWHTH 529
V +S L+G + E + AWH H
Sbjct: 632 FV-----SSSGCLIGLTYVPEQQVG-AWHWH 656
>gi|296532340|ref|ZP_06895077.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296267336|gb|EFH13224.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 626
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 10/175 (5%)
Query: 321 WFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKA 380
W +A+ G+P FH +RL+ GS+ ++LS G ++F L G +A
Sbjct: 222 WDEAAFSAVRGWPVTACFHQDRLVLGGSRDLPNRLWLSRSGDLFNFDL----GSGLDDQA 277
Query: 381 LTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGLSIDFRRVSGSG---VYAC 437
+ + + I + G + V + W+++ SI R + G
Sbjct: 278 IEFGLLSDQVNAIRAVFS-GRHLQVFTSGAEWMVTGEPMTPASIQLHRQTRIGSPVARII 336
Query: 438 PPVSVGDCLVFVCGVGRRI-KYISGSTEQGFRFNEITQLADHLFNQRILQLVYQE 491
PPV V +FV G+ + +Y +Q ++ N++ +A HL Q + + Y +
Sbjct: 337 PPVDVDGSTIFVARSGQAVHEYAYTDVQQAYQANDLALVARHLV-QTPVSMAYDQ 390
>gi|323699364|ref|ZP_08111276.1| hypothetical protein DND132_1955 [Desulfovibrio sp. ND132]
gi|323459296|gb|EGB15161.1| hypothetical protein DND132_1955 [Desulfovibrio desulfuricans
ND132]
Length = 698
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 380 ALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGLS---IDFRRVSGSGVYA 436
A+ ++ A+ I ++ P + +G W LS S S L+ + + G
Sbjct: 330 AIEVTLSGRQANAIEFIVPR-RALWIGTAGGEWTLSASSSDPLTPSNVKAAQEGTGGASG 388
Query: 437 CPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLADHLFNQRILQLVYQEEPHS 495
P +VG ++V GR+I+ +S E + ++T L++H+ + QL Y +EP S
Sbjct: 389 VRPEAVGFAALYVQRAGRKIREMSYRYESDAYVSKDLTLLSEHITEGGLTQLAYVQEPDS 448
Query: 496 IVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWM 555
I++ V + + L+ + + E A + +++D V AAS ND LW+
Sbjct: 449 ILYGV---RGDGI--LVALTYVPDQE--VAAWSRIVTDG-VVERAASVYNDAEKRDELWI 500
Query: 556 LVALSA-GEERSFTVRLN 572
V + GE R + L
Sbjct: 501 TVLRTVNGETRRYVEYLE 518
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 324 SAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSL 368
AWGE + YPS V F+ RL+ + ++ +++LS G F DF L
Sbjct: 164 EAWGEND-YPSAVCFYEQRLVLAATRSRPATLWLSRTGEFSDFRL 207
>gi|325971691|ref|YP_004247882.1| hypothetical protein SpiBuddy_1864 [Spirochaeta sp. Buddy]
gi|324026929|gb|ADY13688.1| hypothetical protein SpiBuddy_1864 [Spirochaeta sp. Buddy]
Length = 551
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 12/144 (8%)
Query: 14 GELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNRVFSFS 73
GE+SP+L R DL ++ QG ++ + G + P ++ R F+
Sbjct: 11 GEISPKL-GGRLDLEMNTQGCEILKDFRNMLQGGITRRPPLKHVAQTV----RGRTIPFT 65
Query: 74 IPDGGYALLVFGDKKLQI----VVVRSSTKWSPALFGKTY-KTPYTFKDNKSLEYAVFGS 128
+ G L+ +KKL++ V+ + + P+ G Y T Y D S++YA +
Sbjct: 66 LSSGESFLVELSNKKLRVWRKGVLGFYTVTFLPS--GNDYLPTDYLEADVWSIQYAQYYD 123
Query: 129 TAVFVHKDHPPHHLLYIQDGDKIS 152
VHKD+ PH ++Y + + S
Sbjct: 124 RLYLVHKDYQPHVVVYAAEAFQFS 147
>gi|144898783|emb|CAM75647.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense
MSR-1]
Length = 635
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 11/165 (6%)
Query: 321 WFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKA 380
W A G+P V FH +RL+ GS+ ++LS ++F L G +A
Sbjct: 230 WEEQALSAVRGWPVSVCFHQDRLVIGGSRDQPNRLWLSKSSDLFNFDL----GEALDDEA 285
Query: 381 LTTAVTDFSASTIHWMHPF-GEGVLVGCDTSLWLLSISLSKGLSIDFRRVSGSGV---YA 436
+ A+ + I H F G + V + W++S SI R + G
Sbjct: 286 IEFALLSDQVNAIR--HVFSGRHLQVFTSGAEWMVSGQPLTPSSIQLTRQTRVGSPIDRT 343
Query: 437 CPPVSVGDCLVFVCGVGRRIK-YISGSTEQGFRFNEITQLADHLF 480
PP V +FV G+ ++ ++ EQ ++ ++ LA H+
Sbjct: 344 VPPRDVDGATLFVSRNGKDLREFLFADVEQAYQSGDLAMLAKHVM 388
>gi|209966375|ref|YP_002299290.1| hypothetical protein RC1_3113 [Rhodospirillum centenum SW]
gi|209959841|gb|ACJ00478.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 638
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 60/150 (40%), Gaps = 14/150 (9%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M K +F+ GELSP LL R DL + G RN++ L G + P
Sbjct: 1 MTRLRSVKAAFTGGELSPDLL-GRGDLRSYETGALALRNVLILPTGGVTRRPGTAYLATL 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
P R+ +F+ LL F D++L++ ++ +TP+T
Sbjct: 60 ---PGPGRLAAFAFDTEQAYLLAFTDRRLEVFRDGATE--------AVLETPWTAGQLAQ 108
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDK 150
L + + H D PP + ++ GD+
Sbjct: 109 LAWTQSADVLLVCHPDVPPRRI--VRSGDR 136
>gi|291334718|gb|ADD94364.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C890]
Length = 135
Score = 41.6 bits (96), Expect = 0.36, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 466 GFRFNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFA 525
G+ ++T LA+H+ QL YQ+EP+ ++W V + +L+G + E + A
Sbjct: 21 GYVAPDLTILAEHISEGGFKQLSYQQEPNQVIWGV-----RNDGQLVGLTYQRE-QQVVA 74
Query: 526 WHTHMISDKHYVLSAASFPNDN 547
WH H+ S A+ P D+
Sbjct: 75 WHRHIFGGSAVCESVATIPTDD 96
>gi|83313369|ref|YP_423633.1| hypothetical protein amb4270 [Magnetospirillum magneticum AMB-1]
gi|82948210|dbj|BAE53074.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
Length = 634
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 18/172 (10%)
Query: 326 WGEQ-----EGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDF----SLDGEYGCYD 376
W EQ G+P V FH RL GS+G ++LS ++F LD E +
Sbjct: 229 WEEQSFSPLRGWPVSVCFHQGRLAIGGSRGLPNRLWLSKSMDLFNFDLGTGLDDEAIEFS 288
Query: 377 PTKALTTAVTD-FSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGLSIDFRRVSGSGVY 435
A+ FS + E ++VG + L I L++ RV
Sbjct: 289 LLSTQVDAIRAVFSGRHLQVFTSGAEWMVVG--SPLTPTKIQLNRQT-----RVGSPVDR 341
Query: 436 ACPPVSVGDCLVFVCGVGRRIK-YISGSTEQGFRFNEITQLADHLFNQRILQ 486
+ PP V FV GR ++ ++ +Q ++ N+++ +A H+ N + Q
Sbjct: 342 SVPPRDVDGATHFVSRSGRDLREFLFADVDQAYQANDLSMVAKHVMNTPVDQ 393
>gi|291334514|gb|ADD94167.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1201]
gi|291336446|gb|ADD96001.1| hypothetical protein [uncultured organism MedDCM-OCT-S04-C1073]
Length = 153
Score = 41.2 bits (95), Expect = 0.42, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 466 GFRFNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFA 525
G+ ++T LA+H+ QL YQ+EP+ ++W V +L+G + E + A
Sbjct: 21 GYVAPDLTILAEHISEGGFKQLSYQQEPNQVIWGVRNDG-----QLVGLTYQRE-QQVVA 74
Query: 526 WHTHMISDKHYVLSAASFPNDN 547
WH H+ S A+ P D+
Sbjct: 75 WHRHIFGGSAVCESVATIPTDD 96
>gi|167032763|ref|YP_001667994.1| hypothetical protein PputGB1_1755 [Pseudomonas putida GB-1]
gi|166859251|gb|ABY97658.1| conserved hypothetical protein [Pseudomonas putida GB-1]
Length = 774
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 16/174 (9%)
Query: 8 KHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSN 67
+ SFSAGE++P +R DL+ + + RN + L G + + + +
Sbjct: 6 QPSFSAGEVAPATY-ARVDLARYYTALKTCRNFVVLPEGGAQNRSGTRFITEVKDSAART 64
Query: 68 RVFSFSIPDGGYALLVFGDKKLQIV-----VVRSSTKWSPALFGKTYKTPYTFKDNKSLE 122
R+ F +L FG+ ++ + VV T + A +PYT L+
Sbjct: 65 RLIPFQFSTEQTYILEFGNLYIRFISMGGQVVSGVTPYEIA-------SPYTTAQLPDLK 117
Query: 123 YAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKS 176
+ VH DHPP L + ++T I F P G+++ ++
Sbjct: 118 FTQSADVMTIVHPDHPPRELSRLA---PTNWTLTAITFEPGIAAPTGLVATART 168
>gi|317152064|ref|YP_004120112.1| hypothetical protein Daes_0341 [Desulfovibrio aespoeensis Aspo-2]
gi|316942315|gb|ADU61366.1| hypothetical protein Daes_0341 [Desulfovibrio aespoeensis Aspo-2]
Length = 698
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 5/125 (4%)
Query: 380 ALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGL---SIDFRRVSGSGVYA 436
A+ ++ A+ I ++ G+ + VG W L SL + SI + G A
Sbjct: 330 AIEVTLSGRQANAIEFLVARGK-LWVGTAGGEWTLGGSLGDPVTPESIKASQEGSCGASA 388
Query: 437 CPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLADHLFNQRILQLVYQEEPHS 495
P +VG +++ GR+I+ ++ E + ++T L++H+ + Q+ Y +EP S
Sbjct: 389 TRPEAVGFATLYIQRAGRKIREMAYRYESDAYVSRDLTILSEHITKPGLTQMAYVQEPDS 448
Query: 496 IVWVV 500
I++ V
Sbjct: 449 ILYCV 453
>gi|288959323|ref|YP_003449664.1| hypothetical protein AZL_024820 [Azospirillum sp. B510]
gi|288911631|dbj|BAI73120.1| hypothetical protein AZL_024820 [Azospirillum sp. B510]
Length = 632
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 56/141 (39%), Gaps = 12/141 (8%)
Query: 8 KHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSN 67
K +F+AGE+S RLL R DL + G RNL P + L P
Sbjct: 9 KTNFTAGEVSRRLL-GRGDLKAYDNGALALRNLF---IDPTGGVTRRSGLAFTALAPGDG 64
Query: 68 RVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVFG 127
R+ +F LLVF D++ I V + ++ + + P+T + +
Sbjct: 65 RLVAFERNSEQTYLLVFTDRR--IDVFQGGSRLA------SVAAPWTLTQLAQITWTQSA 116
Query: 128 STAVFVHKDHPPHHLLYIQDG 148
T + H D PP L DG
Sbjct: 117 DTLLVCHPDLPPRKLTRGDDG 137
>gi|41179374|ref|NP_958682.1| Bbp13 [Bordetella phage BPP-1]
gi|45569506|ref|NP_996575.1| hypothetical protein BMP-1p12 [Bordetella phage BMP-1]
gi|45580757|ref|NP_996623.1| hypothetical protein BIP-1p12 [Bordetella phage BIP-1]
gi|40950113|gb|AAR97679.1| Bbp13 [Bordetella phage BPP-1]
Length = 681
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 87/202 (43%), Gaps = 13/202 (6%)
Query: 332 YPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSAS 391
YP+ V++ R F+G+ +++++ G + ++ D + + V A+
Sbjct: 271 YPAAVSYFEQRRCFAGTTNKPQNIWMTRSGT--ESAMSYSLPVRDDDR-VAFRVAAREAN 327
Query: 392 TIHWMHPFGEGVLVGCDTSLWLLSIS--LSKGLSIDFRRVSGSGVYACPPVSVGDCLVFV 449
I + P E +L+ + S++ +I R S G PV V + ++
Sbjct: 328 AIRHIVPLTELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGATDVQPVVVNNTTIYG 387
Query: 450 CGVGRRIKYISGS-TEQGFRFNEITQLADHLF-NQRILQLVYQEEPHSIVWVVLEPKDNS 507
G ++ ++ + GF +++ A HLF N IL + Y + P IVW + +S
Sbjct: 388 AARGGHVRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFI-----SS 442
Query: 508 FPRLLGCRFSAEGEGDFAWHTH 529
+LLG + E + AWH H
Sbjct: 443 SGKLLGLTYVPEQQIG-AWHQH 463
>gi|291336965|gb|ADD96491.1| hypothetical protein [uncultured organism MedDCM-OCT-S11-C1587]
Length = 474
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 314 AGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFS 367
G + + +W +GYP TFH RL F G K +++ S F+DF+
Sbjct: 243 GGTFIDGGYEDSWSGSKGYPRTATFHEGRLYFGGVKSRPNTIFASRVARFFDFN 296
>gi|291336926|gb|ADD96454.1| hypothetical protein [uncultured organism MedDCM-OCT-S09-C787]
Length = 158
Score = 38.1 bits (87), Expect = 3.8, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 423 SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLADHLFN 481
+I ++ S +G ++VG+ +F+ R+++ ++ + + G+ ++T LA+H+
Sbjct: 60 NILIKKQSNNGAANVDALAVGNATLFLQRARRKLRELAYNFDVDGYVAPDLTILAEHISE 119
Query: 482 QRILQLVYQEEPHSIVWVV 500
QL YQ+EP+ ++W V
Sbjct: 120 GGFKQLSYQQEPNQVIWGV 138
>gi|187476936|ref|YP_784960.1| phage protein [Bordetella avium 197N]
gi|115421522|emb|CAJ48031.1| phage protein [Bordetella avium 197N]
Length = 681
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 13/202 (6%)
Query: 332 YPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSAS 391
YP+ V++ R F+G+ +++++ G S D + V A+
Sbjct: 271 YPAAVSYFEQRRCFAGTINKPQNIWMTRSGTESAMSYSLPVRSDD---RVAFRVAAREAN 327
Query: 392 TIHWMHPFGEGVLVGCDTSLWLLSIS--LSKGLSIDFRRVSGSGVYACPPVSVGDCLVFV 449
I + P E +L+ + S++ +I R S G PV V + ++
Sbjct: 328 AIRHIVPLTELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGATDVQPVVVNNTAIYG 387
Query: 450 CGVGRRIKYISGS-TEQGFRFNEITQLADHLF-NQRILQLVYQEEPHSIVWVVLEPKDNS 507
G ++ ++ + GF +++ HLF N IL + Y + P IVW + +S
Sbjct: 388 AARGGHVRELAYNWQANGFVTGDLSLRCAHLFDNLNILDMAYAKAPQPIVWFI-----SS 442
Query: 508 FPRLLGCRFSAEGEGDFAWHTH 529
+LLG + E + AWH H
Sbjct: 443 SGKLLGLTYVPEQQIG-AWHQH 463
Searching..................................................done
Results from round 2
>gi|254781208|ref|YP_003065621.1| hypothetical protein CLIBASIA_05575 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040885|gb|ACT57681.1| hypothetical protein CLIBASIA_05575 [Candidatus Liberibacter
asiaticus str. psy62]
gi|317120673|gb|ADV02496.1| hypothetical protein SC1_gp080 [Liberibacter phage SC1]
gi|317120817|gb|ADV02638.1| hypothetical protein SC1_gp080 [Candidatus Liberibacter asiaticus]
Length = 578
Score = 687 bits (1772), Expect = 0.0, Method: Composition-based stats.
Identities = 578/578 (100%), Positives = 578/578 (100%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC
Sbjct: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS
Sbjct: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL 180
LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL
Sbjct: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL 180
Query: 181 SISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLT 240
SISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLT
Sbjct: 181 SISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLT 240
Query: 241 TGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGR 300
TGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGR
Sbjct: 241 TGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGR 300
Query: 301 SISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSF 360
SISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSF
Sbjct: 301 SISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSF 360
Query: 361 GAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSK 420
GAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSK
Sbjct: 361 GAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSK 420
Query: 421 GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQLADHLF 480
GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQLADHLF
Sbjct: 421 GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQLADHLF 480
Query: 481 NQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSA 540
NQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSA
Sbjct: 481 NQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSA 540
Query: 541 ASFPNDNRGGTSLWMLVALSAGEERSFTVRLNLLDDFK 578
ASFPNDNRGGTSLWMLVALSAGEERSFTVRLNLLDDFK
Sbjct: 541 ASFPNDNRGGTSLWMLVALSAGEERSFTVRLNLLDDFK 578
>gi|212710810|ref|ZP_03318938.1| hypothetical protein PROVALCAL_01878 [Providencia alcalifaciens DSM
30120]
gi|212686507|gb|EEB46035.1| hypothetical protein PROVALCAL_01878 [Providencia alcalifaciens DSM
30120]
Length = 818
Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats.
Identities = 117/585 (20%), Positives = 221/585 (37%), Gaps = 53/585 (9%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDP 64
+ + SFS GE++P L R DL+ ++ + K N + +YG + + P + +
Sbjct: 4 SIIQPSFSGGEIAPSLY-GRIDLAKYSTALRKCENFLVRQYGGIENRPGTKFIAAAKYPN 62
Query: 65 RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPA---LFGKTYKTPYTFKDNKSL 121
+ R+ F L GDK ++++ ++ TPY D +L
Sbjct: 63 KKCRLIPFQFSTVQTYALEMGDKYMRVIKDGGQVLYADGEHKGEIFELTTPYKEADLFNL 122
Query: 122 EYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLS 181
++ VH D+PP L D + ++ P+ + K
Sbjct: 123 KFTQSADVMTIVHADYPPMELQRYDHDD---WKLVPVETRNGPFEDINVDKERKVYV--- 176
Query: 182 ISQADTSTARITSDMKIFKPLDKGRSIRLGCHP----PEWAKNTNYSIGAYIVADDKVYR 237
A T +T+ IF G+ I + P W + A YR
Sbjct: 177 --SASTGEVTLTATHNIFGAELVGKQIYIEQQAVDAVPVWETDKTTIKNDQRRAGSNYYR 234
Query: 238 SLTTGRSGD-RFGYSKGATYVKDN---NITWITVLNLSSKTSRESASGAVAPYYVWGDIK 293
+ T+G+SG R +++G ++ I W + S G V V D
Sbjct: 235 ANTSGKSGTLRPSHTEGMSWDGWGGDTGIQWEYL---------HSGFGIVKINSVSTDG- 284
Query: 294 DVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDEL 353
++ G+ IS P + + W S W + +GYPS V ++ RL F+GS+
Sbjct: 285 -LTATGKVISYIPSNAV--GESNATYKWARSVWNDVDGYPSTVMYYQQRLFFAGSRAYPQ 341
Query: 354 SVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWL 413
+++ S G + DF + D + + I + G V + +
Sbjct: 342 TIWASRSGDYKDFGKNNPIQDDDR---IIYTYAGRQVNEIRHLIDVGSLVAL-TSGGEYQ 397
Query: 414 LSISLSK---GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRF 469
++ +K S F +G PP++V + +++ G ++ ++ S + G++
Sbjct: 398 ITGDQNKVLTPSSFSFSSQGANGCSDVPPIAVANIALYIQEKGSAVRDLAYSFDVDGYQG 457
Query: 470 NEITQLADHLF-NQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHT 528
++T +A+HLF +I+ + P+SI W + + +LL + E + FAW
Sbjct: 458 TDLTIMANHLFQRHQIIDWAFTIVPYSIAWCIRDDG-----KLLSLTYLRE-QQVFAWAP 511
Query: 529 HMISDKHYVLSAASFPNDNRGGTSLWMLVALSAGE-ERSFTVRLN 572
+ S S +++ +V G+ + RL+
Sbjct: 512 QDTDGQF--ESTCSI--SEGNEDAVYFIVCRKVGDGTVRYIERLS 552
>gi|268589382|ref|ZP_06123603.1| hypothetical protein PROVRETT_05514 [Providencia rettgeri DSM 1131]
gi|291315409|gb|EFE55862.1| hypothetical protein PROVRETT_05514 [Providencia rettgeri DSM 1131]
Length = 818
Score = 549 bits (1413), Expect = e-154, Method: Composition-based stats.
Identities = 115/586 (19%), Positives = 224/586 (38%), Gaps = 55/586 (9%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDP 64
+ + SFS GE++P L R DL+ ++ + K N I +YG + + P + +
Sbjct: 4 SIIQPSFSGGEIAPSLY-GRIDLAKYSTALRKCSNFIVRQYGGIENRPGTKFIAAAKYPN 62
Query: 65 RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALF---GKTYKTPYTFKDNKSL 121
+ R+ F L GDK ++++ ++ + TPY D +L
Sbjct: 63 KKCRLIPFQFSTVQTYALEMGDKYMRVIKDGGQVLYADGEYKGEIFELATPYKEADLFNL 122
Query: 122 EYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLS 181
++ VH D+PP L D + ++ P+ + ++ +
Sbjct: 123 KFTQSADVMTIVHADYPPMELQRYDHDD---WKLVPVETRNGPF------EDINTDKERK 173
Query: 182 IS-QADTSTARITSDMKIFKPLDKGRSIRLGCHP----PEWAKNTNYSIGAYIVADDKVY 236
+ A T +++ IF G+ I + P W + +I A Y
Sbjct: 174 LYVSASTGDVTLSATHNIFGAELVGKQIYIEQQAIDAVPVWETDKTTNINDQRRAGANYY 233
Query: 237 RSLTTGRSGD-RFGYSKGATYVKDN---NITWITVLNLSSKTSRESASGAVAPYYVWGDI 292
R+ T G+SG R +++G ++ I W + S G V V D
Sbjct: 234 RANTAGKSGTLRPSHTEGMSWDGWGGDAGIQWEYL---------HSGFGIVKINSVSTDG 284
Query: 293 KDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDE 352
++ G+ + P + + W S W + +GYPS V ++ RL F+GS+
Sbjct: 285 --LTATGKVVLYIPSNAV--GEENATYKWARSVWNDVDGYPSTVMYYQQRLFFAGSRAYP 340
Query: 353 LSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLW 412
+++ S G + DF + D + + I + G V + +
Sbjct: 341 QTIWASRSGDYKDFGKNNPIQDDDR---IIYTYAGRQVNEIRHLIDVGSLVAL-TSGGEY 396
Query: 413 LLSISLSK---GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFR 468
++ +K S F +G PP++V + +++ G ++ ++ S + G++
Sbjct: 397 QITGDQNKVLTPSSFSFSSQGANGCSDVPPIAVANIALYIQEKGSAVRDLAYSFDVDGYQ 456
Query: 469 FNEITQLADHLF-NQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWH 527
++T +A+HLF +I+ + P+SI W + + +LL + E + FAW
Sbjct: 457 GTDLTIMANHLFQRHQIIDWAFSIVPYSIAWCIRDDG-----KLLSLTYLRE-QQVFAWA 510
Query: 528 THMISDKHYVLSAASFPNDNRGGTSLWMLV-ALSAGEERSFTVRLN 572
+ S S +++ +V G + RL+
Sbjct: 511 PQETDGQF--ESTCSV--SEGNEDAVYFIVCRKVGGGTVRYIERLS 552
>gi|227355852|ref|ZP_03840245.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
gi|227164171|gb|EEI49068.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
Length = 820
Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats.
Identities = 123/584 (21%), Positives = 222/584 (38%), Gaps = 53/584 (9%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDP 64
+ + SFS GE++P L R DL+ ++ + K N I +YG + + P + + +
Sbjct: 4 SLIQPSFSGGEIAPSLY-GRVDLAKYSTALRKCHNFIVRQYGGVENRPGTRFIAETKYQN 62
Query: 65 RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPA---LFGKTYKTPYTFKDNKSL 121
+ +R+ F L FGD+ +++ ++ TPY D L
Sbjct: 63 KKSRLIPFQFSTVQTYALEFGDRYIRVFKDGGQVLYADGEHKGEVFELATPYKEADLFDL 122
Query: 122 EYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLS 181
+Y VH D+PP L D + ++ P+ +K A
Sbjct: 123 KYTQSADVMTIVHTDYPPMELQRYDHDD---WKLVSVETKNGPFEDINTDKAMKVYA--- 176
Query: 182 ISQADTSTARITSDMKIFKPLDKGRSIRLGCHP----PEWAKNTNYSIGAYIVADDKVYR 237
A T +TS IF G+ L P W + ++ AD YR
Sbjct: 177 --SASTGQITLTSTHDIFGSEQIGKQFYLEQRDIDAVPVWETDKTTNLNDQRRADSNYYR 234
Query: 238 SLTTGRSGD-RFGYSKGATYVKDN---NITWITVLNLSSKTSRESASGAVAPYYVWGDIK 293
+ + G++G R +++G ++ I W + S G V V D K
Sbjct: 235 ANSGGKTGTLRPSHTEGMSWDGWGGDTGIQWEYL---------HSGFGIVKIETVSEDGK 285
Query: 294 DVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDEL 353
+ G+ +S P + + W + W + +GYPS V ++ RL F+GS+
Sbjct: 286 --TATGKVLSYIPSNAV--GEDNASHKWARAVWNDVDGYPSTVVYYQQRLFFAGSRAYPQ 341
Query: 354 SVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWL 413
+++ S G + DF + D + + I + G V + +
Sbjct: 342 TIWASRSGDYKDFGRNNPIQDDDR---IIYTYAGRQVNEIRHLIDVGSLVAL-TSGGEYQ 397
Query: 414 LSISLSK---GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRF 469
++ +K S +G PP+SV + +++ G ++ +S S + G++
Sbjct: 398 ITGDQNKVLTPSSFSMSSQGANGSSDLPPISVANIALYIQEKGSAVRDLSYSFDVDGYQG 457
Query: 470 NEITQLADHLF-NQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHT 528
++T LA+HLF RI+ + P+SI W + + +L + E + FAW
Sbjct: 458 TDLTMLANHLFQRHRIVDWSFTTVPYSIAWCIRDDG-----LMLALTYLRE-QQVFAWAP 511
Query: 529 HMISDKHYVLSAASFPNDNRGGTSLWMLVALSA-GEERSFTVRL 571
K S S S + +V + G++ + RL
Sbjct: 512 QSTEGKF--ESTCSI--SEGNEDSAYFIVQRTVNGKQVRYVERL 551
>gi|30387391|ref|NP_848220.1| hypothetical protein epsilon15p12 [Enterobacteria phage epsilon15]
gi|30266046|gb|AAO06075.1| 12 [Salmonella phage epsilon15]
Length = 825
Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats.
Identities = 114/579 (19%), Positives = 216/579 (37%), Gaps = 41/579 (7%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDP 64
+W + SF+ GE+ P L R D+S + + K N I +YG + + P + +
Sbjct: 4 SWIQPSFAGGEIGPSLY-GRIDMSKYQVALRKCDNFIVRQYGGVENRPGTRFVGPAKYPD 62
Query: 65 RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYA 124
R R+ F L FG +++ + + + + PY D +++
Sbjct: 63 RKCRLIPFQFSTVQTYALEFGHNYMRV-IKDGAYVLTTSNVIYELAMPYADTDLFRIKFT 121
Query: 125 VFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQ 184
VH +PP L ++ ++ P+ + VK A
Sbjct: 122 QSADVLTLVHPAYPPKELRRYAHD---NWQIVDVTTKNGPFEDINVDETVKVYA-----S 173
Query: 185 ADTSTARITSDMKIFKPLDKGRSIRLGC----HPPEWAKNTNYSIGAYIVADDKVYRSLT 240
A T T +T+ IF G+ L P W + +I AD YR+ T
Sbjct: 174 ASTGTITLTASSAIFGAEQVGKLFYLEQPAVDSVPVWETSKTTAINDVRRADSNYYRANT 233
Query: 241 TGRSGD-RFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDG 299
+G++G R +++G ++ S G V GD ++
Sbjct: 234 SGKTGTLRPSHTEGMSWDGWGGTGSDDTGIQWE--YLHSGFGIAKITAVAGDG--LTATA 289
Query: 300 RSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSS 359
+S P + + + W AW GYPS V ++ RL F+ S +++ S
Sbjct: 290 DVVSFIPSQ--VVGSANASYKWAKYAWNSVNGYPSTVVYYQQRLYFAASTAYPQTIWASR 347
Query: 360 FGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLS 419
G + DF + D + + I + G V + + +S +
Sbjct: 348 TGDYKDFGKNNPIQDDDR---IIYTYAGRQVNEIRHLIDVGNLVAL-TSGGEYTISGDQN 403
Query: 420 KGLS---IDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQL 475
K L+ F +G PP++V + +F+ G ++ ++ S + G++ ++T L
Sbjct: 404 KVLTPSAFSFSSQGNNGSSNVPPIAVANIALFIQEKGSVVRDLAYSFDVDGYQGTDLTIL 463
Query: 476 ADHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDK 534
A+HLF I+ + P+S + + + +LL + + + FAW + K
Sbjct: 464 ANHLFQKHSIVDWSFCIVPYSSAFCIRDDG-----KLLVLTYLRD-QQVFAWAPQSSAGK 517
Query: 535 HYVLSAASFPNDNRGGTSLWMLVALS-AGEERSFTVRLN 572
+ S S +++ +V + G+ + RL+
Sbjct: 518 Y--ESTCSI--SEGSEDAVYFVVNRTINGQTVRYIERLS 552
>gi|215487813|ref|YP_002330244.1| hypothetical protein E2348C_2746 [Escherichia coli O127:H6 str.
E2348/69]
gi|215265885|emb|CAS10294.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
Length = 825
Score = 538 bits (1386), Expect = e-151, Method: Composition-based stats.
Identities = 115/579 (19%), Positives = 213/579 (36%), Gaps = 41/579 (7%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDP 64
+W + SF+ GE+ P L R D+S + + K N I +YG + + P + +
Sbjct: 4 SWIQPSFAGGEIGPSLY-GRIDMSKYQVALRKCDNFIVRQYGGVENRPGTRFVGPAKYPD 62
Query: 65 RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYA 124
R R+ F L FG +++ + + + PY D +++
Sbjct: 63 RKCRLIPFQFSTVQTYALEFGHNYMRV-IKDGEYVLTTSNVIYELAMPYADTDLFRIKFT 121
Query: 125 VFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQ 184
VH +PP L ++ ++ P+ + VK A
Sbjct: 122 QSADVLTLVHPAYPPKELRRYAHD---NWQIVDVTTKNGPFEDINVDDTVKVYA-----S 173
Query: 185 ADTSTARITSDMKIFKPLDKGRSIRLGC----HPPEWAKNTNYSIGAYIVADDKVYRSLT 240
A T T +T+ IF G+ L P W + +I AD YR+ T
Sbjct: 174 ASTGTITLTASSAIFGAEQVGKLFYLEQPAVDSVPVWETSKTTAINDVRRADSNYYRANT 233
Query: 241 TGRSGD-RFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDG 299
G++G R +++G ++ S G V GD ++
Sbjct: 234 AGKTGTLRPSHTEGMSWDGWGGTGSDDTGIQWE--YLHSGFGIAKITAVSGDG--LTATA 289
Query: 300 RSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSS 359
+S P + + + W AW GYPS V ++ RL F+ S +++ S
Sbjct: 290 DVVSFIPSQ--VVGSANASYKWAKYAWNSVNGYPSTVVYYQQRLYFAASTAYPQTIWASR 347
Query: 360 FGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLS 419
G + DF + D + + I + G V + + +S +
Sbjct: 348 TGDYKDFGKNNPIQDDDR---IIYTYAGRQVNEIRHLIDVGNLVAL-TSGGEYTISGDQN 403
Query: 420 KGLS---IDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQL 475
K L+ F +G PP++V + +F+ G ++ ++ S + G++ ++T L
Sbjct: 404 KVLTPSAFSFSSQGNNGSSNVPPIAVANIALFIQEKGSVVRDLAYSFDVDGYQGTDLTIL 463
Query: 476 ADHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDK 534
A+HLF I+ + P+S + + + +LL + + + FAW S K
Sbjct: 464 ANHLFQKHSIVDWSFCIVPYSSAFCIRDDG-----KLLVLTYLRD-QQVFAWAPQSSSGK 517
Query: 535 HYVLSAASFPNDNRGGTSLWMLVAL-SAGEERSFTVRLN 572
+ S S +++ +V G+ + RL+
Sbjct: 518 Y--ESTCSI--SEGSEDAVYFVVNRNINGQTVRYIERLS 552
>gi|315122895|ref|YP_004063384.1| hypothetical protein CKC_05755 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496297|gb|ADR52896.1| hypothetical protein CKC_05755 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 588
Score = 537 bits (1382), Expect = e-150, Method: Composition-based stats.
Identities = 224/583 (38%), Positives = 339/583 (58%), Gaps = 25/583 (4%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M +TK SF+ GE+SP+++QSR DL LH+QG+++ N+IPL+ G LV P + Y
Sbjct: 1 MPKGAYTKRSFAGGEVSPQIMQSRSDLELHSQGLSQCFNMIPLQDGSLVRRPPLYRYEHI 60
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
L P+++R+ SF++ L +FG+KK+ V V T P F + Y TPY+F++ +
Sbjct: 61 DLPPKASRILSFALGGDDAVLFIFGEKKMVYVEV---TGIKPPQFIRFYDTPYSFREAEQ 117
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL 180
L+ A G+ V VH H P+ + + + G F+++ F PPPWLG + G K +AKL
Sbjct: 118 LDVARMGTLIVLVHPKHSPYKIEFTEAG----VIFEKMVFAPPPWLGLREVGGKKHDAKL 173
Query: 181 SISQADT--STARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRS 238
++ + T +TS + IFK D GR +RLG P +W NT Y A++ KVYR
Sbjct: 174 RVTLSATRKGKITVTSTLPIFKTKDVGRMLRLGWLPKDWTANTLYPENAFMQMYGKVYRC 233
Query: 239 LTTGRSGDRFGYSKGATYVKDNNITWITV-------LNLSSKTSRESASGAVAPYYVWGD 291
+T G SG F ++ TY++D +TW + ++ K++ + PYYVWG+
Sbjct: 234 ITEGISGKEFEDNRRDTYIRDGGVTWKVIASSQALSVDKDGKSTLGTGGQYRTPYYVWGE 293
Query: 292 IKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGD 351
I + + +++ V S + W MSAWGE+EGYPSHV+F+NNRL FSGSK D
Sbjct: 294 IVNCT-GAKTVEVMLHEGFCVTDSNSTLYWNMSAWGEREGYPSHVSFYNNRLCFSGSKFD 352
Query: 352 ELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSL 411
+VY S + F DFS D G D K+L+ A+TD + S I W P +G+++G DTSL
Sbjct: 353 PQAVYFSGYNTFTDFSPDTIEGNVDYRKSLSVAITDDTMSAIRWFRPMEKGLVIGTDTSL 412
Query: 412 WLLSISLSKGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNE 471
W++ + +G ++ RR++G GVY PP+S+GD L+FV G GRRI+ I G++EQGF+F E
Sbjct: 413 WIVILDFERGFNLVSRRLAGIGVYEAPPLSIGDELIFVQGAGRRIQIIGGASEQGFQFLE 472
Query: 472 ITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMI 531
+TQ DHL + RI QL YQE+P+S++WV+ N+ LLGC A + +WH H +
Sbjct: 473 LTQNVDHLLDYRIRQLAYQEDPYSLLWVL-----NNKGELLGCSLHANSKEKGSWHVHKL 527
Query: 532 SDKHY-VLSAASFPNDNRGGTSLWMLVAL--SAGEERSFTVRL 571
+ ++S +S ++G T++W+L+ G RL
Sbjct: 528 GGRGVKIMSLSSCLCLDQGETTVWLLLRRMNEDGVSSIGLERL 570
>gi|89152436|ref|YP_512269.1| hypothetical protein PhiV10p15 [Escherichia phage phiV10]
gi|74055459|gb|AAZ95908.1| hypothetical protein PhiV10p15 [Escherichia phage phiV10]
Length = 823
Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats.
Identities = 118/587 (20%), Positives = 219/587 (37%), Gaps = 57/587 (9%)
Query: 4 TTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLD 63
+W + SF+ GE+ P L R D++ + + K N I +YG + + P + +
Sbjct: 3 ISWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYP 61
Query: 64 PRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEY 123
R R+ F L FG + +++ + + + + TPYT D +++
Sbjct: 62 NRKCRLIPFQFSTVQTYALEFGHQYMRV-IKDGALVLNSSNVIYEIATPYTEADLFRIKF 120
Query: 124 AVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSIS 183
VH +PP L ++ ++ P+ + + A
Sbjct: 121 TQSADVLTLVHPAYPPKELRRYAHD---NWQLVDVVTKNGPFEDINIDESLTVYA----- 172
Query: 184 QADTSTARITSDMKIFKPLDKGRSIRLGC----HPPEWAKNTNYSIGAYIVADDKVYRSL 239
A T T +T+ IF G+ L P W + + SIG AD YR++
Sbjct: 173 SASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAV 232
Query: 240 TTGRSGD-RFGYSKGA-------TYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGD 291
T G++G R +++G + D I W + S G V G
Sbjct: 233 TAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYL---------HSGFGIARITAVNG- 282
Query: 292 IKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGD 351
+ IS P + + W AW GYP V ++ RL F+ S
Sbjct: 283 ---TTATAEVISYIPSQ--VVGEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAF 337
Query: 352 ELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSL 411
+++ S G + DF D + + I + G V +
Sbjct: 338 PQTIWASRTGDYKDFGKSNPTQDDDR---IIYTYAGRQVNEIRHLIDVGSLVAL-TSGGE 393
Query: 412 WLLSISLSK---GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGF 467
++++ +K S F +G PP++V + +FV G ++ ++ S + G+
Sbjct: 394 YVITGDQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGY 453
Query: 468 RFNEITQLADHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAW 526
+ N++T LA+HLF I+ + P+S + + + +LL + + + FAW
Sbjct: 454 QGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDG-----KLLVMTYLRD-QQVFAW 507
Query: 527 HTHMISDKHYVLSAASFPNDNRGGTSLWMLVALSA-GEERSFTVRLN 572
+ K+ S S +++ +V + G+ + RL+
Sbjct: 508 APQSSTGKY--ESTCSI--SEGNEDAVYFVVNRTVNGQTVRYIERLS 550
>gi|294493191|gb|ADE91947.1| conserved hypothetical protein [Escherichia coli IHE3034]
Length = 823
Score = 529 bits (1361), Expect = e-148, Method: Composition-based stats.
Identities = 118/587 (20%), Positives = 219/587 (37%), Gaps = 57/587 (9%)
Query: 4 TTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLD 63
+W + SF+ GE+ P L R D++ + + K N I +YG + + P + +
Sbjct: 3 ISWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYP 61
Query: 64 PRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEY 123
R R+ F L FG + +++ + + + + TPYT D +++
Sbjct: 62 NRKCRLIPFQFSTVQTYALEFGHQYMRV-IKDGALVLNSSNVIYEIATPYTEADLFRIKF 120
Query: 124 AVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSIS 183
VH +PP L ++ ++ P+ + V A
Sbjct: 121 TQSADVLTLVHPAYPPKELRRYAHD---NWQLVDVVTKNGPFEDINIDESVTVYA----- 172
Query: 184 QADTSTARITSDMKIFKPLDKGRSIRLGC----HPPEWAKNTNYSIGAYIVADDKVYRSL 239
A T T +T+ IF G+ L P W + + SIG AD YR++
Sbjct: 173 SASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAV 232
Query: 240 TTGRSGD-RFGYSKGA-------TYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGD 291
T G++G R +++G + D I W + S G V G
Sbjct: 233 TAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYL---------HSGFGIARITAVNG- 282
Query: 292 IKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGD 351
+ IS P + + W AW GYP V ++ RL F+ S
Sbjct: 283 ---TTATAEVISYIPSQ--VVGEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAF 337
Query: 352 ELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSL 411
+++ S G + DF D + + I + G V +
Sbjct: 338 PQTIWASRTGDYKDFGKSNPTQDDDR---IIYTYAGRQVNEIRHLIDVGSLVAL-TSGGE 393
Query: 412 WLLSISLSK---GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGF 467
++++ +K S F +G PP++V + +FV G ++ ++ S + G+
Sbjct: 394 YVITGDQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGY 453
Query: 468 RFNEITQLADHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAW 526
+ N++T LA+HLF I+ + P+S + + + +LL + + + FAW
Sbjct: 454 QGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDG-----KLLVMTYLRD-QQVFAW 507
Query: 527 HTHMISDKHYVLSAASFPNDNRGGTSLWMLVALSA-GEERSFTVRLN 572
+ K+ S S +++ ++ + G+ + RL+
Sbjct: 508 APQSSTGKY--ESTCSI--SEGNEDAVYFVINRTVNGQTVRYIERLS 550
>gi|327252176|gb|EGE63848.1| phage protein [Escherichia coli STEC_7v]
Length = 823
Score = 529 bits (1361), Expect = e-148, Method: Composition-based stats.
Identities = 118/587 (20%), Positives = 218/587 (37%), Gaps = 57/587 (9%)
Query: 4 TTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLD 63
+W + SF+ GE+ P L R D++ + + K N I +YG + + P + +
Sbjct: 3 ISWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYP 61
Query: 64 PRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEY 123
R R+ F L FG + +++ + + + + TPYT D +++
Sbjct: 62 NRKCRLIPFQFSTVQTYALEFGHQYMRV-IKDGALVLNSSNVIYEIATPYTEADLFRIKF 120
Query: 124 AVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSIS 183
VH +PP L ++ ++ P+ + V A
Sbjct: 121 TQSADVLTLVHPAYPPKELRRYAHD---NWQLVDVVTKNGPFEDINIDESVTVYA----- 172
Query: 184 QADTSTARITSDMKIFKPLDKGRSIRLGC----HPPEWAKNTNYSIGAYIVADDKVYRSL 239
A T T +T+ IF G+ L P W + + SIG AD YR++
Sbjct: 173 SASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAV 232
Query: 240 TTGRSGD-RFGYSKGA-------TYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGD 291
T G++G R +++G + D I W + S G G
Sbjct: 233 TAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYL---------HSGFGIARISAANG- 282
Query: 292 IKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGD 351
+ IS P + + W AW GYP V ++ RL F+ S
Sbjct: 283 ---TTATAEVISYIPSQ--VVGEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAF 337
Query: 352 ELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSL 411
+++ S G + DF D + + I + G V +
Sbjct: 338 PQTIWASRTGDYKDFGKSNPTQDDDR---IIYTYAGRQVNEIRHLIDVGSLVAL-TSGGE 393
Query: 412 WLLSISLSK---GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGF 467
++++ +K S F +G PP++V + +FV G ++ ++ S + G+
Sbjct: 394 YVITGDQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGY 453
Query: 468 RFNEITQLADHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAW 526
+ N++T LA+HLF I+ + P+S + + + +LL + + + FAW
Sbjct: 454 QGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDG-----KLLVMTYLRD-QQVFAW 507
Query: 527 HTHMISDKHYVLSAASFPNDNRGGTSLWMLVALSA-GEERSFTVRLN 572
+ K+ S S +++ +V + G+ + RL+
Sbjct: 508 APQSSTGKY--ESTCSI--SEGNEDAVYFVVNRTVNGQTVRYIERLS 550
>gi|300898435|ref|ZP_07116776.1| conserved domain protein [Escherichia coli MS 198-1]
gi|300357902|gb|EFJ73772.1| conserved domain protein [Escherichia coli MS 198-1]
Length = 823
Score = 528 bits (1360), Expect = e-148, Method: Composition-based stats.
Identities = 118/587 (20%), Positives = 219/587 (37%), Gaps = 57/587 (9%)
Query: 4 TTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLD 63
+W + SF+ GE+ P L R D++ + + K N I +YG + + P + +
Sbjct: 3 ISWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYP 61
Query: 64 PRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEY 123
R R+ F L FG + +++ + + + + TPYT D +++
Sbjct: 62 NRKCRLIPFQFSTVQTYALEFGHQYMRV-IKDGALVLNSSNVIYEIATPYTEADLFRIKF 120
Query: 124 AVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSIS 183
VH +PP L ++ ++ P+ + V A
Sbjct: 121 TQSADVLTLVHPAYPPKELRRYAHD---NWQLVDVVTKNGPFEDINIDESVTVYA----- 172
Query: 184 QADTSTARITSDMKIFKPLDKGRSIRLGC----HPPEWAKNTNYSIGAYIVADDKVYRSL 239
A T T +T+ IF G+ L P W + + SIG AD YR++
Sbjct: 173 SASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAV 232
Query: 240 TTGRSGD-RFGYSKGA-------TYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGD 291
T G++G R +++G + D I W + S G V G
Sbjct: 233 TAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYL---------HSGFGIARITAVNG- 282
Query: 292 IKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGD 351
+ IS P + + W AW GYP V ++ RL F+ S
Sbjct: 283 ---TTATAEVISYIPSQ--VVGEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAF 337
Query: 352 ELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSL 411
+++ S G + DF D + + I + G V +
Sbjct: 338 PQTIWASRTGDYKDFGKSNPTQDDDR---IIYTYAGRQVNEIRHLIDVGSLVAL-TSGGE 393
Query: 412 WLLSISLSK---GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGF 467
++++ +K S F +G PP++V + +FV G ++ ++ S + G+
Sbjct: 394 YVITGDQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGY 453
Query: 468 RFNEITQLADHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAW 526
+ +++T LA+HLF I+ + P+S + + + +LL + + + FAW
Sbjct: 454 QGSDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDG-----KLLVMTYLRD-QQVFAW 507
Query: 527 HTHMISDKHYVLSAASFPNDNRGGTSLWMLVALSA-GEERSFTVRLN 572
+ K+ S S +++ +V + G+ + RL+
Sbjct: 508 APQSSTGKY--ESTCSI--SEGNEDAVYFVVNRTVNGQTVRYIERLS 550
>gi|301046400|ref|ZP_07193560.1| conserved domain protein [Escherichia coli MS 185-1]
gi|300301626|gb|EFJ58011.1| conserved domain protein [Escherichia coli MS 185-1]
Length = 821
Score = 528 bits (1359), Expect = e-147, Method: Composition-based stats.
Identities = 118/587 (20%), Positives = 219/587 (37%), Gaps = 57/587 (9%)
Query: 4 TTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLD 63
+W + SF+ GE+ P L R D++ + + K N I +YG + + P + +
Sbjct: 3 ISWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYP 61
Query: 64 PRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEY 123
R R+ F L FG + +++ + + + + TPYT D +++
Sbjct: 62 NRKCRLIPFQFSTVQTYALEFGHQYMRV-IKDGALVLNSSNVIYEIATPYTEADLFRIKF 120
Query: 124 AVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSIS 183
VH +PP L ++ ++ P+ + V A
Sbjct: 121 TQSADVLTLVHPAYPPKELRRYAHD---NWQLVDVVTKNGPFEDINIDESVTVYA----- 172
Query: 184 QADTSTARITSDMKIFKPLDKGRSIRLGC----HPPEWAKNTNYSIGAYIVADDKVYRSL 239
A T T +T+ IF G+ L P W + + SIG AD YR++
Sbjct: 173 SASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAV 232
Query: 240 TTGRSGD-RFGYSKGA-------TYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGD 291
T G++G R +++G + D I W + S G G
Sbjct: 233 TAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYL---------HSGFGIARISAANG- 282
Query: 292 IKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGD 351
+ IS P + + W AW GYP V ++ RL F+ S
Sbjct: 283 ---TTATAEVISYIPSQ--VVGEDNASYKWAKYAWNSINGYPGTVVYYQQRLYFAASTAF 337
Query: 352 ELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSL 411
+++ S G + DF D + + I + G V +
Sbjct: 338 PQTIWASRTGDYKDFGKSNPTQDDDR---IIYTYAGRQVNEIRHLIDVGSLVAL-TSGGE 393
Query: 412 WLLSISLSKGLS---IDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGF 467
++++ +K L+ F +G PP++V + +FV G ++ ++ S + G+
Sbjct: 394 YVITGDQNKALTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGY 453
Query: 468 RFNEITQLADHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAW 526
+ N++T LA+HLF I+ + P+S + + + +LL + + + FAW
Sbjct: 454 QGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDG-----KLLVMTYLRD-QQVFAW 507
Query: 527 HTHMISDKHYVLSAASFPNDNRGGTSLWMLVALSA-GEERSFTVRLN 572
+ K+ S S +++ +V + G+ + RL+
Sbjct: 508 APQSSTGKY--ESTCSI--SEGNEDAVYFVVNRTVNGQTVRYIERLS 550
>gi|323156125|gb|EFZ42284.1| phage protein [Escherichia coli EPECa14]
Length = 823
Score = 527 bits (1356), Expect = e-147, Method: Composition-based stats.
Identities = 118/587 (20%), Positives = 218/587 (37%), Gaps = 57/587 (9%)
Query: 4 TTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLD 63
+W SF+ GE+ P L R D++ + + K N I +YG + + P + +
Sbjct: 3 ISWIHPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYP 61
Query: 64 PRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEY 123
R R+ F L FG + +++ + + + + TPYT D +++
Sbjct: 62 NRKCRLIPFQFSTVQTYALEFGHQYMRV-IKDGALVLNSSNVIYEIATPYTEADLFRIKF 120
Query: 124 AVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSIS 183
VH +PP L ++ ++ P+ + V A
Sbjct: 121 TQSADVLTLVHPAYPPKELRRYAHD---NWQLVDVVTKNGPFEDINIDESVTVYA----- 172
Query: 184 QADTSTARITSDMKIFKPLDKGRSIRLGC----HPPEWAKNTNYSIGAYIVADDKVYRSL 239
A T T +T++ IF G+ L P W + + SIG AD YR++
Sbjct: 173 SASTGTITLTANASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAV 232
Query: 240 TTGRSGD-RFGYSKGA-------TYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGD 291
T G++G R +++G + D I W + S G G
Sbjct: 233 TAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYL---------HSGFGIARISAANG- 282
Query: 292 IKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGD 351
+ IS P + + W AW GYP V ++ RL F+ S
Sbjct: 283 ---TTATAEVISYIPSQ--VVGEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAF 337
Query: 352 ELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSL 411
+++ S G + DF D + + I + G V +
Sbjct: 338 PQTIWASRTGDYKDFGKSNPTQDDDR---IIYTYAGRQVNEIRHLIDVGSLVAL-TSGGE 393
Query: 412 WLLSISLSK---GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGF 467
++++ +K S F +G PP++V + +FV G ++ ++ S + G+
Sbjct: 394 YVITGDQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGY 453
Query: 468 RFNEITQLADHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAW 526
+ N++T LA+HLF I+ + P+S + + + +LL + + + FAW
Sbjct: 454 QGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDG-----KLLVMTYLRD-QQVFAW 507
Query: 527 HTHMISDKHYVLSAASFPNDNRGGTSLWMLVALSA-GEERSFTVRLN 572
+ K+ S S +++ +V + G+ + RL+
Sbjct: 508 APQSSTGKY--ESTCSI--SEGNEDAVYFVVNRTVNGQTVRYIERLS 550
>gi|332344346|gb|AEE57680.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 823
Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats.
Identities = 118/587 (20%), Positives = 218/587 (37%), Gaps = 57/587 (9%)
Query: 4 TTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLD 63
+W + SF+ GE+ P L R D++ + + K N I +YG + + P + +
Sbjct: 3 ISWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYP 61
Query: 64 PRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEY 123
R R+ F L FG + +++ + + + + TPYT D +++
Sbjct: 62 NRKCRLIPFQFSTVQTYALEFGHQYMRV-IKDGALVLNSSNVIYEIATPYTEADLFRIKF 120
Query: 124 AVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSIS 183
VH +PP L ++ ++ P+ + V A
Sbjct: 121 TQSADVLTLVHPAYPPKELRRYAHD---NWQLVDVVTKNGPFEDINIDESVTVYA----- 172
Query: 184 QADTSTARITSDMKIFKPLDKGRSIRLGC----HPPEWAKNTNYSIGAYIVADDKVYRSL 239
A T T +T+ IF G+ L P W + + SIG AD YR++
Sbjct: 173 SASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAV 232
Query: 240 TTGRSGD-RFGYSKGA-------TYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGD 291
T G++G R +++G + D I W + S G G
Sbjct: 233 TAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYL---------HSGFGIARISAANG- 282
Query: 292 IKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGD 351
+ IS P + + W AW GYP V ++ RL F+ S
Sbjct: 283 ---TTATAEVISYIPSQ--VVGEDNASYKWAKYAWDSINGYPGTVVYYQQRLYFAASTAF 337
Query: 352 ELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSL 411
+++ S G + DF D + + I + G V +
Sbjct: 338 PQTIWASRTGDYKDFGKSNPTQDDDR---IIYTYAGRQVNEIRHLIDVGSLVAL-TSGGE 393
Query: 412 WLLSISLSK---GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGF 467
++++ +K S F +G PP++V + +FV G ++ ++ S + G+
Sbjct: 394 YVITGDQNKVLAPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGY 453
Query: 468 RFNEITQLADHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAW 526
+ N++T LA+HLF I+ + P+S + + + +LL + + + FAW
Sbjct: 454 QGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDG-----KLLVMTYLRD-QQVFAW 507
Query: 527 HTHMISDKHYVLSAASFPNDNRGGTSLWMLVALSA-GEERSFTVRLN 572
+ K+ S S +++ +V + G+ + RL+
Sbjct: 508 APQSSTGKY--ESTCSI--SEGNEDAVYFVVNRTVNGQTVRYIERLS 550
>gi|315121933|ref|YP_004062422.1| hypothetical protein CKC_00915 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495335|gb|ADR51934.1| hypothetical protein CKC_00915 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 588
Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats.
Identities = 225/583 (38%), Positives = 337/583 (57%), Gaps = 25/583 (4%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M +TK SF+ GE+SP+++QSR DL LH+QG+++ N+IPL G LV P + Y
Sbjct: 1 MPKGAYTKRSFAGGEVSPQIIQSRSDLELHSQGLSQCFNMIPLSDGSLVRRPPLHRYEHI 60
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
L P+++R+ SF++ L +FG+KK+ V V T P F + Y TPY+F++ +
Sbjct: 61 DLPPKASRILSFALGGDEAVLFIFGEKKMVYVEV---TGIKPPQFIRFYGTPYSFREAEQ 117
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL 180
L+ A G+ V VH H P+ + + + G F+++ F PPPWLG + G K +AKL
Sbjct: 118 LDVARMGTLIVLVHPKHSPYKIEFTEAG----VIFEKMVFAPPPWLGRREVGGKKHDAKL 173
Query: 181 SISQADT--STARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRS 238
++ + T +TS + IFKP D GR + LG P +W NT Y A++ KVYR
Sbjct: 174 RVTLSATRKGKITVTSTLPIFKPKDVGRMLCLGWLPKDWTANTLYPENAFMQMYGKVYRC 233
Query: 239 LTTGRSGDRFGYSKGATYVKDNNITWITV-------LNLSSKTSRESASGAVAPYYVWGD 291
+T G SG F ++ TY++D +TW + ++ K++ + PYYVWG+
Sbjct: 234 ITEGISGKEFEDNRRDTYIRDGGVTWKVIASSQALSVDKDGKSTLGTGGQYRTPYYVWGE 293
Query: 292 IKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGD 351
I + + +++ V S + W MSAWGE+EGYPSHV+F+NNRL FSGSK D
Sbjct: 294 IVNCT-GAKTVEVMLHEGFCVTDSNSTLYWNMSAWGEREGYPSHVSFYNNRLCFSGSKFD 352
Query: 352 ELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSL 411
+VY S + F DFS D G D K+L+ A+TD + S I W P +G+++G DTSL
Sbjct: 353 PQAVYFSGYNTFTDFSPDTIEGNVDYRKSLSVAITDDTMSAIRWFRPMEKGLVIGTDTSL 412
Query: 412 WLLSISLSKGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNE 471
W++ + +G ++ RR++G GVY PP+S+GD L+FV G GRRI+ I G++EQGF+F E
Sbjct: 413 WIVILDFERGFNLVSRRLAGIGVYEAPPLSIGDELIFVQGAGRRIQIIGGASEQGFQFLE 472
Query: 472 ITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMI 531
+TQ DHL + RI QL YQE+P+S++WV+ N+ LL C A + +WHTH
Sbjct: 473 LTQNVDHLLDYRIRQLAYQEDPYSLLWVL-----NNKGELLSCSLHANSKEKGSWHTHKS 527
Query: 532 SDK-HYVLSAASFPNDNRGGTSLWMLVALS--AGEERSFTVRL 571
++S +S ++G T++W LV+ + G RL
Sbjct: 528 GGGWVKIMSLSSCLCLDQGETTIWFLVSRTNEDGVSSIGLERL 570
>gi|331648168|ref|ZP_08349258.1| conserved hypothetical protein [Escherichia coli M605]
gi|331043028|gb|EGI15168.1| conserved hypothetical protein [Escherichia coli M605]
Length = 823
Score = 524 bits (1348), Expect = e-146, Method: Composition-based stats.
Identities = 117/587 (19%), Positives = 217/587 (36%), Gaps = 57/587 (9%)
Query: 4 TTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLD 63
+W + SF+ GE+ P L R D++ + + K N I +YG + + P + +
Sbjct: 3 ISWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYP 61
Query: 64 PRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEY 123
R R+ F L FG + +++ + + + + TPYT D +++
Sbjct: 62 NRKCRLIPFQFSTVQTYALEFGHQYMRV-IKDGALVLNSSNVIYEIATPYTEADLFRIKF 120
Query: 124 AVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSIS 183
VH +PP L ++ ++ P+ + V A
Sbjct: 121 TQSADVLTLVHPAYPPKELRRYAHD---NWQLVDVVTKNGPFEDINIDESVTVYA----- 172
Query: 184 QADTSTARITSDMKIFKPLDKGRSIRLGC----HPPEWAKNTNYSIGAYIVADDKVYRSL 239
A T T +T+ IF G+ L P W + + SIG AD YR++
Sbjct: 173 SASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAV 232
Query: 240 TTGRSGD-RFGYSKGA-------TYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGD 291
T G++G R +++G + D I W + S G
Sbjct: 233 TAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYL---------HSGFGIARITAA--- 280
Query: 292 IKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGD 351
+ IS P + + W AW GYP V ++ RL F+ S
Sbjct: 281 -NGTTATAEVISYIPSQ--VVGEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAF 337
Query: 352 ELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSL 411
+++ S G + DF D + + I + G V +
Sbjct: 338 PQTIWASRTGDYKDFGKSNPTQDDDR---IIYTYAGRQVNEIRHLIDVGSLVAL-TSGGE 393
Query: 412 WLLSISLSK---GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGF 467
++++ +K S F +G PP++V + +FV G ++ ++ S + G+
Sbjct: 394 YVITGDQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGY 453
Query: 468 RFNEITQLADHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAW 526
+ N++T LA+HLF I+ + P+S + + + +LL + + + FAW
Sbjct: 454 QGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDG-----KLLVMTYLRD-QQVFAW 507
Query: 527 HTHMISDKHYVLSAASFPNDNRGGTSLWMLVALSA-GEERSFTVRLN 572
+ K+ S S +++ +V + G+ + RL+
Sbjct: 508 APQSSTGKY--ESTCSI--SEGNEDAVYFVVNRTVNGQTVRYIERLS 550
>gi|298381710|ref|ZP_06991309.1| conserved hypothetical protein [Escherichia coli FVEC1302]
gi|298279152|gb|EFI20666.1| conserved hypothetical protein [Escherichia coli FVEC1302]
Length = 823
Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats.
Identities = 117/587 (19%), Positives = 217/587 (36%), Gaps = 57/587 (9%)
Query: 4 TTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLD 63
+W + SF+ GE+ P L R D++ + + K N I +YG + + P + +
Sbjct: 3 ISWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYP 61
Query: 64 PRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEY 123
R R+ F L FG + +++ + + + + TPYT D +++
Sbjct: 62 NRKCRLIPFQFSTVQTYALEFGHQYMRV-IKDGALVLNSSNVIYEIATPYTEADLFRIKF 120
Query: 124 AVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSIS 183
VH +PP L ++ ++ P+ + V A
Sbjct: 121 TQSADVLTLVHPAYPPKELRRYAHD---NWQLVDVVTKNGPFEDINIDESVTVYA----- 172
Query: 184 QADTSTARITSDMKIFKPLDKGRSIRLGC----HPPEWAKNTNYSIGAYIVADDKVYRSL 239
A T T +T+ IF G+ L P W + + SIG AD YR++
Sbjct: 173 SASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAV 232
Query: 240 TTGRSGD-RFGYSKGA-------TYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGD 291
T G++G R +++G + D I W + S G
Sbjct: 233 TAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYL---------HSGFGIARITAA--- 280
Query: 292 IKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGD 351
+ IS P + + W AW GYP V ++ RL F+ S
Sbjct: 281 -NGTTATAEVISYIPSQ--VVGEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAF 337
Query: 352 ELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSL 411
+++ S G + DF D + + I + G V +
Sbjct: 338 PQTIWASRTGDYKDFGKSNPTQDDDR---IIYTYAGRQVNEIRHLIDVGSLVAL-TSGGE 393
Query: 412 WLLSISLSK---GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGF 467
++++ +K S F +G PP++V + +FV G ++ ++ S + G+
Sbjct: 394 YVITGDQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGY 453
Query: 468 RFNEITQLADHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAW 526
+ N++T LA+HLF I+ + P+S + + + +LL + + + FAW
Sbjct: 454 QGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDG-----KLLVMTYLRD-QQVFAW 507
Query: 527 HTHMISDKHYVLSAASFPNDNRGGTSLWMLVALSA-GEERSFTVRLN 572
+ K+ S S +++ +V + G+ + RL+
Sbjct: 508 APQSSTGKY--ESTCSI--SEGNEDAVYFVVNRTVNGQTVRYIERLS 550
>gi|117624704|ref|YP_853617.1| hypothetical protein APECO1_4049 [Escherichia coli APEC O1]
gi|115513828|gb|ABJ01903.1| conserved hypothetical protein [Escherichia coli APEC O1]
Length = 823
Score = 523 bits (1346), Expect = e-146, Method: Composition-based stats.
Identities = 114/580 (19%), Positives = 214/580 (36%), Gaps = 43/580 (7%)
Query: 4 TTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLD 63
+W + SF+ GE+ P L R D++ + + K N I +YG + + P + +
Sbjct: 3 ISWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYP 61
Query: 64 PRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEY 123
R R+ F L FG + +++ + + + + TPYT D +++
Sbjct: 62 NRKCRLIPFQFSTVQTYALEFGHQYMRV-IKDGALVLNSSNVIYEIATPYTEADLFRIKF 120
Query: 124 AVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSIS 183
VH +PP L ++ ++ P+ + V A
Sbjct: 121 TQSADVLTLVHPAYPPKELRRYAHD---NWQLVDVVTKNGPFEDINIDESVTVYA----- 172
Query: 184 QADTSTARITSDMKIFKPLDKGRSIRLGC----HPPEWAKNTNYSIGAYIVADDKVYRSL 239
A T T +T+ IF G+ L P W + + SIG AD YR++
Sbjct: 173 SASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAV 232
Query: 240 TTGRSGD-RFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKD 298
T G++G R +++G ++ S G +
Sbjct: 233 TAGKTGTLRPSHTEGTSWDGWGGSG--DDDIGIEWEYLHSGFGIARITAA----NGTTAT 286
Query: 299 GRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLS 358
IS P + + W AW GYP V ++ RL F+ S +++ S
Sbjct: 287 AEVISYIPSQ--VVGEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAFPQTIWAS 344
Query: 359 SFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISL 418
G + DF D + + I + G V + ++++
Sbjct: 345 RTGDYKDFGKSNPTQDDDR---IIYTYAGRQVNEIRHLIDVGSLVAL-TSGGEYVITGDQ 400
Query: 419 SK---GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQ 474
+K S F +G PP++V + +FV G ++ ++ S + G++ N++T
Sbjct: 401 NKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTI 460
Query: 475 LADHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISD 533
LA+HLF I+ + P+S + + + +LL + + + FAW +
Sbjct: 461 LANHLFQKHSIVDWCFSIVPYSSAFCIRDDG-----KLLVMTYLRD-QQVFAWAPQSSTG 514
Query: 534 KHYVLSAASFPNDNRGGTSLWMLVALSA-GEERSFTVRLN 572
K+ S S +++ +V + G+ + RL+
Sbjct: 515 KY--ESTCSI--SEGNEDAVYFVVNRTVNGQTVRYIERLS 550
>gi|324008552|gb|EGB77771.1| conserved domain protein [Escherichia coli MS 57-2]
Length = 823
Score = 523 bits (1346), Expect = e-146, Method: Composition-based stats.
Identities = 117/587 (19%), Positives = 217/587 (36%), Gaps = 57/587 (9%)
Query: 4 TTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLD 63
+W + SF+ GE+ P L R D++ + + K N I +YG + + P + +
Sbjct: 3 ISWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYP 61
Query: 64 PRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEY 123
R R+ F L FG + +++ + + + + TPYT D +++
Sbjct: 62 NRKCRLIPFQFSTVQTYALEFGHQYMRV-IKDGALVLNSSNVIYEIATPYTEADLFRIKF 120
Query: 124 AVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSIS 183
VH +PP L ++ ++ P+ + V A
Sbjct: 121 TQSADVLTLVHPAYPPKELRRYAHD---NWQLVDVVTKNGPFEDINIDESVTVYA----- 172
Query: 184 QADTSTARITSDMKIFKPLDKGRSIRLGC----HPPEWAKNTNYSIGAYIVADDKVYRSL 239
A T T +T+ IF G+ L P W + + SIG AD YR++
Sbjct: 173 SASTGTITLTASASIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAV 232
Query: 240 TTGRSGD-RFGYSKGA-------TYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGD 291
T G++G R +++G + D I W + S G
Sbjct: 233 TAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYL---------HSGFGIARITAA--- 280
Query: 292 IKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGD 351
+ IS P + + W AW GYP V ++ RL F+ S
Sbjct: 281 -NGTTATAEVISYIPSQ--VVGEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAF 337
Query: 352 ELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSL 411
+++ S G + DF D + + I + G V +
Sbjct: 338 PQTIWASRTGDYKDFGKSNPTQDDDR---IIYTYAGRQVNEIRHLIDVGSLVAL-TSGGE 393
Query: 412 WLLSISLSK---GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGF 467
++++ +K S F +G PP++V + +FV G ++ ++ S + G+
Sbjct: 394 YVITGDQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGY 453
Query: 468 RFNEITQLADHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAW 526
+ N++T LA+HLF I+ + P+S + + + +LL + + + FAW
Sbjct: 454 QGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDG-----KLLVMTYLRD-QQVFAW 507
Query: 527 HTHMISDKHYVLSAASFPNDNRGGTSLWMLVALSA-GEERSFTVRLN 572
+ K+ S S +++ +V + G+ + RL+
Sbjct: 508 APQSSTGKY--ESTCSI--SEGNEDAVYFVVNRTVNGQTVRYIERLS 550
>gi|218700982|ref|YP_002408611.1| hypothetical protein ECIAI39_2672 [Escherichia coli IAI39]
gi|218370968|emb|CAR18795.1| conserved hypothetical protein from phage origin [Escherichia coli
IAI39]
gi|323948677|gb|EGB44582.1| hypothetical protein ERKG_04900 [Escherichia coli H252]
Length = 823
Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats.
Identities = 117/587 (19%), Positives = 218/587 (37%), Gaps = 57/587 (9%)
Query: 4 TTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLD 63
+W + SF+ GE+ P L R D++ + + K N I +YG + + P + +
Sbjct: 3 ISWIQPSFAGGEIGPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYP 61
Query: 64 PRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEY 123
R R+ F L FG + +++ + + + + TPYT D +++
Sbjct: 62 NRKCRLIPFQFSTVQTYALEFGHQYMRV-IKDGALVLNSSNVIYEIATPYTEADLFRIKF 120
Query: 124 AVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSIS 183
VH +PP L ++ ++ P+ + V A
Sbjct: 121 TQSADVLTLVHPAYPPKELRRYAHD---NWQLVDVVTKNGPFEDINIDESVTVYA----- 172
Query: 184 QADTSTARITSDMKIFKPLDKGRSIRLGC----HPPEWAKNTNYSIGAYIVADDKVYRSL 239
A T T +T+ + IF G+ L P W + + SIG AD YR++
Sbjct: 173 SASTGTITLTASVSIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAV 232
Query: 240 TTGRSGD-RFGYSKGA-------TYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGD 291
T G++G R +++G + D I W + S G
Sbjct: 233 TAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYL---------HSGFGIARITAA--- 280
Query: 292 IKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGD 351
+ IS P + + W AW GYP V ++ RL F+ S
Sbjct: 281 -NGTTATAEVISYIPSQ--VVGEDNASYKWAKYAWNSVNGYPGTVVYYQQRLYFAASTAF 337
Query: 352 ELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSL 411
+++ S G + DF D + + I + G V +
Sbjct: 338 PQTIWASRTGDYKDFGKSNPTQDDDR---IIYTYAGRQVNEIRHLIDVGSLVAL-TSGGE 393
Query: 412 WLLSISLSK---GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGF 467
++++ +K S F +G PP++V + +FV G ++ ++ S + G+
Sbjct: 394 YVITGDQNKVLTPSSFAFSSQGSNGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGY 453
Query: 468 RFNEITQLADHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAW 526
+ N++T LA+HLF I+ + P+S + + + +LL + + + FAW
Sbjct: 454 QGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDG-----KLLVMTYLRD-QQVFAW 507
Query: 527 HTHMISDKHYVLSAASFPNDNRGGTSLWMLVALSA-GEERSFTVRLN 572
+ K+ S S +++ +V + G+ + RL+
Sbjct: 508 APQSSTGKY--ESTCSI--SEGNEDAVYFVVNRTVNGQTVRYIERLS 550
>gi|309702804|emb|CBJ02135.1| hypothetical phage protein [Escherichia coli ETEC H10407]
Length = 807
Score = 517 bits (1332), Expect = e-144, Method: Composition-based stats.
Identities = 106/563 (18%), Positives = 208/563 (36%), Gaps = 40/563 (7%)
Query: 21 LQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNRVFSFSIPDGGYA 80
+ R D++ + + K N I +YG + + P + + + R R+ F
Sbjct: 1 MYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGEAKYPTRKCRLIPFQFSTVQTY 60
Query: 81 LLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVFGSTAVFVHKDHPPH 140
L FG +++ + + + + PY D +++ VH +PP
Sbjct: 61 ALEFGHNYMRV-IKDGAYVLNSSNVIYELAMPYADTDLFRIKFTQSADVLTLVHPAYPPK 119
Query: 141 HLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQADTSTARITSDMKIFK 200
L ++ ++ P+ + VK A A T T +T+ IF
Sbjct: 120 ELRRYAHD---NWQIVDVTTKNGPFEDINVDETVKVYA-----SASTGTITLTASSAIFG 171
Query: 201 PLDKGRSIRLGC----HPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGD-RFGYSKGAT 255
G+ L P W + +I AD YR+ T+G++G R +++G +
Sbjct: 172 AEQVGKLFYLEQPAIDSVPVWETSKTTAINDVRRADSNYYRANTSGKTGTLRPSHTEGMS 231
Query: 256 YVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAG 315
+ S G V D ++ +S P + +
Sbjct: 232 WDGWGGTGDSDTGIQWE--YLHSGFGIARITAVSSDG--LTATATVVSYIPSQ--VVGSA 285
Query: 316 VSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCY 375
W AW GYPS V ++ RL F+ S +++ S G + DF +
Sbjct: 286 NGSYKWARYAWNSVNGYPSTVVYYQQRLYFAASTAYPQTIWASRTGDYKDFGKNNPIQDD 345
Query: 376 DPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGLS---IDFRRVSGS 432
D + + I + G V + + +S +K L+ F +
Sbjct: 346 DR---IIYTYAGRQVNEIRHLIDVGNLVAL-TSGGEYTISGDQNKVLTPSAFSFSSQGNN 401
Query: 433 GVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLADHLFNQR-ILQLVYQ 490
G PP++V + +F+ G ++ ++ S + G++ ++T LA+HLF +R I+ +
Sbjct: 402 GSSNVPPIAVANIALFIQEKGSVVRDLAYSFDVDGYQGTDLTILANHLFQKRSIVDWSFC 461
Query: 491 EEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGG 550
P+S + + + +LL + + + FAW + K+ S S
Sbjct: 462 IVPYSSAFCIRDDG-----KLLVLTYLRD-QQVFAWAPQSSTGKY--ESTCSI--SEGSE 511
Query: 551 TSLWMLVALS-AGEERSFTVRLN 572
+++ +V + G+ + + RL+
Sbjct: 512 DAVYFVVNRTINGQTKRYIERLS 534
>gi|262043557|ref|ZP_06016670.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039091|gb|EEW40249.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 511
Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats.
Identities = 113/534 (21%), Positives = 203/534 (38%), Gaps = 36/534 (6%)
Query: 4 TTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLD 63
+W + SFS GE++P L R D++ + + K N I +YG + + P Q +
Sbjct: 3 VSWIQPSFSGGEIAPSLY-GRIDMAKYQVALRKCDNFIVRQYGGVENRPGTQFIAAAKYP 61
Query: 64 PRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEY 123
R R+ F L FG +++ + + TPYT D L++
Sbjct: 62 DRKCRLIPFQFSTVQTYALEFGHNYMRV-IKDGGLVLTTGDVIYELATPYTENDVFGLKF 120
Query: 124 AVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSIS 183
VH +PP L ++ +++ P+ + +
Sbjct: 121 TQSADVMTIVHPSYPPKELRRYAHD---NWQIVDVQTTNGPFEDINVDESKTV-----WA 172
Query: 184 QADTSTARITSDMKIFKPLDKGRSIRLGC----HPPEWAKNTNYSIGAYIVADDKVYRSL 239
A T T +TS IF G+ L P W + + SI AD YR+
Sbjct: 173 SAPTGTITLTSSSAIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIEDIRRADSNYYRAN 232
Query: 240 TTGRSGD-RFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKD 298
T G++G R +++G + S G V V GD ++
Sbjct: 233 TAGKTGTLRPSHTEGMAWDGWGGT--GDDDTGVQWEYLHSGFGIVRITAVAGDG--LTAT 288
Query: 299 GRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLS 358
+S P++ + A + W AW GYP+ V ++ RL F+ S +++ S
Sbjct: 289 ADVVSRIPEN--VVGADKASYKWARYAWNSVNGYPATVVYYQQRLYFAASPAYPQTIWAS 346
Query: 359 SFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISL 418
G + DF D + + I + G ++V ++++
Sbjct: 347 RTGDYKDFGKSNPTQDDDR---IVYTYAGRQVNEIRHLIDVG-SLVVLTSGGEFVVTGDQ 402
Query: 419 SKGLS---IDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQ 474
+K L+ +G PP++V + +F+ G ++ ++ S + GF+ N++T
Sbjct: 403 NKVLTPSAFSLSSQGSNGCSDVPPIAVSNIALFIQEKGSVVRDLAYSFDVDGFQGNDLTI 462
Query: 475 LADHLFNQR-ILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWH 527
LA+HLF +R I+ + P S + V + +LL + + + FAW
Sbjct: 463 LANHLFQKRSIVDWAFCIVPFSSAFCVRDDG-----KLLVLTYLRD-QQVFAWS 510
>gi|304398395|ref|ZP_07380269.1| conserved hypothetical protein [Pantoea sp. aB]
gi|304354261|gb|EFM18634.1| conserved hypothetical protein [Pantoea sp. aB]
Length = 824
Score = 508 bits (1307), Expect = e-141, Method: Composition-based stats.
Identities = 111/579 (19%), Positives = 203/579 (35%), Gaps = 41/579 (7%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDP 64
+ + SF+ GE+SP + R DL+ ++ + + RN I +YG L + P + + +
Sbjct: 4 SLIQPSFAGGEISPNVY-GRVDLAKYSIALRRCRNFIVRQYGGLENRPGTRFIAEAKYPD 62
Query: 65 RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYA 124
R R+ F L FG +++ TPY D L+
Sbjct: 63 RKCRLIPFQFSTVQTYALEFGHNYMRVY-KDGGQVLDGNNQVYELATPYQEADLFELKIT 121
Query: 125 VFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQ 184
HK + P L S+ E+ P+ + VK A
Sbjct: 122 QSADVMTICHKAYAPRELRRFGHA---SWELVEVVTKNGPFEDINIDPSVKVYA-----S 173
Query: 185 ADTSTARITSDMKIFKPLDKGRSIRLGC----HPPEWAKNTNYSIGAYIVADDKVYRSLT 240
+ + ++ IF G+ L P W + ++G A D Y +LT
Sbjct: 174 SYQGNITLNANASIFGSEQVGKLFYLEQVNVDSTPVWETDKAVAVGMTRRAGDNYYVALT 233
Query: 241 TGRSGD-RFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDG 299
G++G R +++GA + + + G I
Sbjct: 234 AGKTGTLRPSHTEGAAWDGWGSNGDNDTGIQWEYQHSGFGIARITSVSSDGYI----AAA 289
Query: 300 RSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSS 359
+ P + W AW + GYP VT++ RL+F+ S +++ S
Sbjct: 290 VVQTYMPNDAV--GPTKASYKWAKFAWNQVNGYPGTVTYYQQRLIFAASIKYPQTIWCSK 347
Query: 360 FGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLS 419
G + DF D + + I + G V + + + +
Sbjct: 348 TGDYKDFGKTSPIADDDR---IVYTYAGKQVNEIRHLIDVGSLVAL-TSGGQFQIVGDQN 403
Query: 420 K---GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQL 475
K + F G + P++V + +F+ G ++ ++ S + G++ +++T L
Sbjct: 404 KTLTPTAFSFSSQGADGASSVAPITVSNIALFIQEKGSVVRDLAYSFDVDGYQGSDLTVL 463
Query: 476 ADHLFNQ-RILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDK 534
A+HLFN R++ + P+S W V S LL + E + FAW +
Sbjct: 464 ANHLFNGYRLVDWTFSVVPYSAGWAVR-----SDGMLLCLTYLRE-QQVFAWAPQP--GE 515
Query: 535 HYVLSAASFPNDNRGGTSLWMLVALSA-GEERSFTVRLN 572
S S +++ V + G + + RL+
Sbjct: 516 GKFESTCSI--SEGTEDAVYFSVQRTVNGASKRYIERLS 552
>gi|330007163|ref|ZP_08305905.1| hypothetical protein HMPREF9538_03594 [Klebsiella sp. MS 92-3]
gi|328535510|gb|EGF61970.1| hypothetical protein HMPREF9538_03594 [Klebsiella sp. MS 92-3]
Length = 825
Score = 504 bits (1296), Expect = e-140, Method: Composition-based stats.
Identities = 113/585 (19%), Positives = 210/585 (35%), Gaps = 45/585 (7%)
Query: 5 TWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDP 64
+ + S + GE+SP L R DL + + + RN I + G + + P + +
Sbjct: 4 SLVQPSLAGGEISPSLY-GRIDLEKYQTSLRRCRNFIVRQSGGIENRPGFRFLGSAKYAD 62
Query: 65 RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYA 124
R +R+ F L GD ++ + TP+ L++
Sbjct: 63 RYSRLIPFQFSVSQTYALELGDHYFRVWSN--GALVTDGGSPVEVATPWPVSVISELKFT 120
Query: 125 VFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQ 184
H D+PP + + D + + P+ V A
Sbjct: 121 QSADVMTVCHNDYPPLEIRRYGEAD---WRTAAVTTTSGPFQDLNTDDSVTVYA-----S 172
Query: 185 ADTSTARITSDMKIFKPLDKGRSIRLGCHPPE----WAKNTNYSIGAYIVADDKVYRSLT 240
T + +T+ IFK G+ + + W + + +G + YR +
Sbjct: 173 GRTGSVTLTASSPIFKSQHVGKLFYMEQKAVDSVGRWETDKDIGVGDECRYQENFYRCVD 232
Query: 241 TGRSGDR----FGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVS 296
G +G ++ G ++ VL S G + GD +
Sbjct: 233 GGSNGTTGTVAPTHTTGDSWDGWGLGGRNGVL----WRYLHSGFGVCRITAIAGDGLTAT 288
Query: 297 KD--GRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELS 354
D R + + + W AW + +GYP VT++ RL+F GS+ +
Sbjct: 289 ADVVPRQDGEIELPAQVVGSTFATYKWAHYAWNDTDGYPGTVTYYQQRLIFGGSRAFPQT 348
Query: 355 VYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLL 414
++ S G +++F D A+T + I + G+ ++V + +
Sbjct: 349 IWCSRTGDYHNFYRSNPKVDDD---AITYNYAGRQLNKILHLLDVGQ-LIVLTSGGEFKV 404
Query: 415 SISLSKGLS----IDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRF 469
+ + L+ S +G P++VG ++V G I+ + S + ++
Sbjct: 405 TGDSNGNLTGTGGFAMSGQSFNGSSDLAPINVGSVALYVQQKGSIIRDLFYSFDQDSYQS 464
Query: 470 NEITQLADHLFNQ-RILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHT 528
+++T LA HLFN I +P S+ W S LLG + E + +AWH
Sbjct: 465 SDLTLLASHLFNGYSIRDWALSVQPFSVAWCAR-----SDGMLLGLTYLRE-QQVYAWHP 518
Query: 529 HMISDKHYVLSAASFPNDNRGGTSLWMLVALSA-GEERSFTVRLN 572
H +++ YV S S +++ L+ + G + RLN
Sbjct: 519 HPMTNG-YVESICSI--SEGQEDAVYALIRRTVNGSTVRYIERLN 560
>gi|320175038|gb|EFW50151.1| 12 [Shigella dysenteriae CDC 74-1112]
Length = 799
Score = 488 bits (1256), Expect = e-135, Method: Composition-based stats.
Identities = 107/564 (18%), Positives = 203/564 (35%), Gaps = 56/564 (9%)
Query: 27 LSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNRVFSFSIPDGGYALLVFGD 86
++ + + K N I +YG + + P + + R R+ F L FG
Sbjct: 1 MAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPNRKCRLIPFQFSTVQTYALEFGH 60
Query: 87 KKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVFGSTAVFVHKDHPPHHLLYIQ 146
+ +++ + + + + TPYT D +++ VH +PP L
Sbjct: 61 QYMRV-IKDGALVLNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYA 119
Query: 147 DGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKGR 206
++ ++ P+ + V A A T T +T+ IF G+
Sbjct: 120 HD---NWQLVDVVTKNGPFEDINIDESVTVYA-----SASTGTITLTASASIFGAEQVGK 171
Query: 207 SIRLGC----HPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGD-RFGYSKGA------- 254
L P W + + SIG AD YR++T G++G R +++G
Sbjct: 172 LFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAVTAGKTGTLRPSHTEGTSWDGWGG 231
Query: 255 TYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQA 314
+ D I W + S G + IS P +
Sbjct: 232 SGDDDTGIEWEYL---------HSGFGIARITAA----NGTTATAEVISYIPSQ--VVGE 276
Query: 315 GVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGC 374
+ W W GYP V ++ RL F+ S +++ S G + DF
Sbjct: 277 DNASYKWAKYTWNSVNGYPGTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQD 336
Query: 375 YDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSK---GLSIDFRRVSG 431
D + + I + G V + ++++ +K S F
Sbjct: 337 DDR---IIYTYAGRQVNEIRHLIDVGSLVAL-TSGGEYVITGDQNKVLTPSSFAFSSQGS 392
Query: 432 SGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLADHLFN-QRILQLVY 489
+G PP++V + +FV G ++ ++ S + G++ N++T LA+HLF I+ +
Sbjct: 393 NGSSNVPPIAVANIALFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCF 452
Query: 490 QEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRG 549
P+S + + + +LL + + + FAW + K+ S S
Sbjct: 453 SIVPYSSAFCIRDDG-----KLLVMTYLRD-QQVFAWAPQSSTGKY--ESTCSI--SEGN 502
Query: 550 GTSLWMLVALSA-GEERSFTVRLN 572
+++ +V + G+ + RL+
Sbjct: 503 EDAVYFVVNRTVNGQTVRYIERLS 526
>gi|48697202|ref|YP_024932.1| hypothetical protein BcepC6B_gp12 [Burkholderia phage BcepC6B]
gi|47779008|gb|AAT38371.1| gp12 [Burkholderia phage BcepC6B]
Length = 768
Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats.
Identities = 129/616 (20%), Positives = 222/616 (36%), Gaps = 67/616 (10%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M + SF AGELSP LL +R DL+ + G N I GP + +
Sbjct: 1 MPKAAPQQVSFDAGELSP-LLGARVDLAKYPNGCQVMENFIATVQGPAIRRGGKRFVAAT 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDN-- 118
+ + + + F + DG +L FGD ++ V R A TPY D
Sbjct: 60 KDSTKQSWLLPFIVADGIAYMLEFGDHYIRFFVNRGQLV--NAGAPVEIATPYALADLTT 117
Query: 119 ----KSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGV 174
++ T H +P LL +F+ + F+ P+ + V
Sbjct: 118 EDGTFAIRATQSADTMYLFHGGYPTQKLLRTS---ATTFSLQPVTFVGGPF------AAV 168
Query: 175 KSNAKLSI-SQADTSTARITSDMKIFKPLDKGRSIRLGCHPPE----WAKNTNYSIGAYI 229
S+ + + + A T + + +F+P D G L W +
Sbjct: 169 NSDNNVRVHASAGTGAVTLVASASVFRPSDVGTLFYLEQEDNSFVKPWVVHQKIGPSELR 228
Query: 230 VADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPY--- 286
D+VY G + + ++ T+ + W S T + GA Y
Sbjct: 229 RVGDRVYLCTAVGTATPQVTGTETPTHT--SGSRWDGTGQDESATDEYGSIGAEWEYQHS 286
Query: 287 -----YVWGDIKDVSKDGRSISVAPQSQTLFQAG----VSVVSWFMSAWGEQEGYPSHVT 337
+ G D G + P + W S + +G+P T
Sbjct: 287 GYGTVLITGYTNDQVVTGTVATNDPADPGMLPNTVVTLTGTYKWARSLFNSTDGFPQMGT 346
Query: 338 FHNNRLLFSGSKGDELSVYLSSFGAFYDF-SLDGEYGCYDPTKALTTAVTDFSASTIHWM 396
F NRL + +S F F + D + D A+ + + + WM
Sbjct: 347 FWRNRLCLMRDRWLA----MSVSADFETFKTKDADQQTDD--SAIVQQLNARQLNKLAWM 400
Query: 397 HPFGEGVLVGCDTSLWLLSISLS----KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGV 452
+ +L+G W++ + + +++ R + G PV VG ++FV
Sbjct: 401 VE-SDSLLIGMTGDEWVIGPANASQPVSAANLNAARRTSYGSKRIQPVQVGGTIMFVQKA 459
Query: 453 GRRIKYISGST-EQGFRFNEITQLADHLFN------QRILQLVYQEEPHSIVWVVLEPKD 505
GR+++ + ++T++ADH+ I+ L +Q+EPHS+VW
Sbjct: 460 GRKLRDFKYDFSSDNYVSTDVTKIADHITRGRAGTNSGIMSLCFQQEPHSVVWAAR---- 515
Query: 506 NSFPRLLGCRFSAE--GEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVALSA-G 562
+ +L+GC + E + WH H ++ +V AS P + LW++V G
Sbjct: 516 -ADGQLIGCTYDEEAGRSDVYGWHRHPDANG-FVECVASMPAPDGASDDLWVIVRRQVNG 573
Query: 563 EERSFTVRLN--LLDD 576
+ + LN L DD
Sbjct: 574 QTVRYVEYLNPALQDD 589
>gi|221213947|ref|ZP_03586920.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221166124|gb|EED98597.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
Length = 766
Score = 484 bits (1246), Expect = e-134, Method: Composition-based stats.
Identities = 129/613 (21%), Positives = 218/613 (35%), Gaps = 63/613 (10%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M + SF AGELSP LL +R DL+ +A G N I GP V +
Sbjct: 1 MPKAAAQQVSFDAGELSP-LLGARVDLAKYANGCLLLENFIATVQGPAVRRGGKRYVSAI 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDN-- 118
+ + + F + DG +L FGD+ ++ V R A TPY D
Sbjct: 60 KDSGKQAWLLPFIVSDGIAYMLEFGDQYIRFYVNRGQLVNDSA--PVEIATPYALADLVT 117
Query: 119 ----KSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGV 174
++ T H +P L +F + F+ P+ + +
Sbjct: 118 EDGTFAIRATQSADTMYLFHGAYPTQKLSRTS---ATTFELQPVTFVGGPFATVNDNNSI 174
Query: 175 KSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPE----WAKNTNYSIGAYIV 230
+ A + +T++ +F+ D G + P WA + +
Sbjct: 175 RVQA-----SGQSGDVTLTANADVFRASDVGTLFYVEQEQPTGIVPWAVHAESHVNDIRR 229
Query: 231 ADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESAS-------GAV 283
D+ YR G + + + + + W + S
Sbjct: 230 VGDRTYRCTQIGLNAPQVTGQETPIHTE--GRRWDGDGRDPDGDTYGSIGVEWEYQHSGY 287
Query: 284 APYYVWGDIKDVSKDGRSISVAPQSQTLFQAGV---SVVSWFMSAWGEQEGYPSHVTFHN 340
A + G + + P + V W S + +G+P TF +
Sbjct: 288 ATVLITGFVNARQVSATVTTNNPNDPCMIPKPVVDSGTYKWARSLFNSTDGFPQMGTFWS 347
Query: 341 NRLLFSGSKGDELSVYLSSFGAFYDF-SLDGEYGCYDPTKALTTAVTDFSASTIHWMHPF 399
NRL + + +S F +F + D + D A+ + + + WM
Sbjct: 348 NRLCVMRDRW----IAMSVSADFENFKTKDADQQTDD--SAIVQQLNARRLNKLAWMVE- 400
Query: 400 GEGVLVGCDTSLWLLSISLS----KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRR 455
+ +LVG W++ S + ++ RR + G PV VG ++FV GR+
Sbjct: 401 SDSLLVGMTGDEWVIGKSNASLALSATNMSARRRTSYGSKRLQPVEVGGTILFVQKAGRK 460
Query: 456 IKYISGST-EQGFRFNEITQLADHLFN------QRILQLVYQEEPHSIVWVVLEPKDNSF 508
++ + ++T++ADH+ I+ L YQ+EPHSIVW +
Sbjct: 461 LRDFKYDFSSDNYVSTDVTKIADHVTRGRSGTNSGIMSLCYQQEPHSIVWAAR-----AD 515
Query: 509 PRLLGCRFSAE--GEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVAL-SAGEER 565
+L+GC + E + WH H + +V AS P + LWM+V G+
Sbjct: 516 GQLIGCTYDEEAGRSDVYGWHRHPDVNG-FVECVASMPAPDGASDDLWMIVRRQINGQSV 574
Query: 566 SFTVRLN--LLDD 576
+ LN L DD
Sbjct: 575 RYVEYLNQSLQDD 587
>gi|221201505|ref|ZP_03574544.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
gi|221207939|ref|ZP_03580945.1| hypothetical protein BURMUCGD2_2474 [Burkholderia multivorans CGD2]
gi|221172124|gb|EEE04565.1| hypothetical protein BURMUCGD2_2474 [Burkholderia multivorans CGD2]
gi|221178773|gb|EEE11181.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
Length = 767
Score = 482 bits (1239), Expect = e-134, Method: Composition-based stats.
Identities = 131/612 (21%), Positives = 217/612 (35%), Gaps = 60/612 (9%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M + SF AGELSP LL +R D++ + G N I GP V +
Sbjct: 1 MPKAAAQQVSFDAGELSP-LLGARVDIAKYPNGCKVMENFIATVQGPAVRRGGKRFVAAV 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDN-- 118
+ + + F + DG +L FGD ++ V R + TPY D
Sbjct: 60 KDSSKQAWLLPFIVSDGIAYMLEFGDHYIRFYVDRGQLVNAGG--PVEIATPYALADLVT 117
Query: 119 ----KSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGV 174
++ T H +PP LL +F+ ++ F+ P+ GV
Sbjct: 118 EDGTFAIRATQSADTMYLFHGAYPPQKLLRTS---ATTFSLQQVTFVSGPFQTINSDEGV 174
Query: 175 KSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHP-----PEWAKNTNYSIGAYI 229
A T +T+ +F D G L + P T G
Sbjct: 175 TVKA-----SGQTGAVTLTATAPVFSQADVGALFYLEQNDNTSVLPWSVHGTILETGLVR 229
Query: 230 VADDKVYRSLTTGRSGDRFGYSKGATYVK----DNNITW-ITVLNLSSKTSRESASGAVA 284
D+ Y S G + + S+ T+ + D ++T + E A
Sbjct: 230 RVGDRTYVSTAIGPTAPQVTGSETPTHTRGRRYDGDLTDLANDNYGTIGIEWEYQHSGYA 289
Query: 285 PYYVWGDIKDVSKDGRSISVAPQSQTLFQAG---VSVVSWFMSAWGEQEGYPSHVTFHNN 341
+ G + P + W + + +GYP TF N
Sbjct: 290 TVLITSVSDSQHATGTVTTNNPTDPCIIPQSIVDTGTYKWAHALFNAADGYPQMGTFWRN 349
Query: 342 RLLFSGSKGDELSVYLSSFGAFYDF-SLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFG 400
RL + S F +F S D + D A+ + + + WM
Sbjct: 350 RLWMMRDRWLV----GSVSADFENFASKDADQQTDD--SAIVQQLNARQLNKLAWMVE-S 402
Query: 401 EGVLVGCDTSLWLLSISLS----KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRI 456
+ +++G W++ + + +++ R + G PV VG ++FV GR++
Sbjct: 403 DSLIIGMTGDEWVIGPANASQPVSATNLNAARRTSYGSKRIQPVQVGGTIMFVQKAGRKL 462
Query: 457 KYISGST-EQGFRFNEITQLADHLFNQ------RILQLVYQEEPHSIVWVVLEPKDNSFP 509
+ F ++T+LADH+ I+ L +Q+EPHSIVW +
Sbjct: 463 RDFKYDFSSDNFVSTDVTKLADHITRGRSGTNNGIMSLCFQQEPHSIVWAAR-----ADG 517
Query: 510 RLLGCRFSAE--GEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVAL-SAGEERS 566
+L+GC + E + WH H ++ +V AS P + LW++V G+
Sbjct: 518 QLIGCTYDEEAGRSDVYGWHRHPDANG-FVECVASMPAPDGASDDLWLIVRRQINGQTVR 576
Query: 567 FTVRLN--LLDD 576
+ LN L DD
Sbjct: 577 YVEYLNPALQDD 588
>gi|317120716|gb|ADV02538.1| hypothetical protein SC2_gp080 [Liberibacter phage SC2]
gi|317120777|gb|ADV02598.1| hypothetical protein SC2_gp080 [Candidatus Liberibacter asiaticus]
Length = 590
Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats.
Identities = 160/591 (27%), Positives = 258/591 (43%), Gaps = 43/591 (7%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M K+SF++GE+SP + QS +L ++ +A N IPLR G L+ P + Y
Sbjct: 1 MTKAIHFKNSFASGEVSPFVHQSGSNLKIYQSCLAHCHNYIPLRTGALMRRPGTRIYHVF 60
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
+ R+FSF ++V G KL I R T + PY +D
Sbjct: 61 DDVDKPQRLFSFVKDAYTAYIIVLGYLKLHIFERRMGGCSK----VTTIEVPYKKEDVDE 116
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL 180
+E A T VH HPP L + F E+ F P L + I K + L
Sbjct: 117 IEVAQNIDTLWMVHPKHPPCQLELKGKD----WEFKEVLFKHVPPLKEQFIDDKKVSINL 172
Query: 181 SISQADTSTAR-----ITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKV 235
+T T + + +D ++FK +D GR + LG P W +T Y +Y+V +D++
Sbjct: 173 KTPFENTETGKTGMVSVEADGEMFKEMDIGRELNLGFRPQRWIPDTWYLDNSYVVHNDRL 232
Query: 236 YRSLTTGRS-GDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVW-GDIK 293
+ + G+S + +S KD + W V ES G +W +
Sbjct: 233 LKCINKGKSQSTEWTFSDKEHQQKDGSCLWEKV---------ESTKGNARNLLIWVTGVI 283
Query: 294 DVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDEL 353
K + + + + Q + W + WG++EGYPS +TF NRL+ SG K +
Sbjct: 284 KRFKTAKCVLLELKGAFPLQNDLPTKHWLLGEWGQKEGYPSCITFFGNRLVLSGGKHNPQ 343
Query: 354 SVYLSSFGAFYDFSLDGEY-GCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLW 412
+V+ S F DF+ E G D T + + + I W+ G+LVG +++LW
Sbjct: 344 TVHFSKLDDFTDFNQISEQGGNTDLTSSFSVLLGSDVRQGIQWLSHTDSGLLVGTESALW 403
Query: 413 LLSISLS----KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYI-----SGST 463
L++ + ++ R + G A P+ VG VF+ GR + + + +T
Sbjct: 404 LITQTSQNEVVSKATVAIRSIGNFGSIAVSPILVGSHCVFIKDTGRDLISLVGNRSADNT 463
Query: 464 EQGFRFNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGD 523
+ +RF ++ A+H+ + + + V Q+ P+SI+WVVL RL+GC F + E
Sbjct: 464 KTEYRFRDLNLFAEHILTKGVWEAVLQQSPYSIIWVVLRDG-----RLVGCTFDPDNE-V 517
Query: 524 FAWHTHMISD-KHYVLSAASFPNDNRGGTSLWMLVAL--SAGEERSFTVRL 571
AWHTH + + S S + G LW+LV G + +L
Sbjct: 518 CAWHTHDLGGFYTQIHSLTSCASFLDGQDDLWLLVERLDDTGRKTRSLEKL 568
>gi|120601703|ref|YP_966103.1| hypothetical protein Dvul_0653 [Desulfovibrio vulgaris DP4]
gi|120561932|gb|ABM27676.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4]
Length = 699
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 126/578 (21%), Positives = 207/578 (35%), Gaps = 77/578 (13%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M T ++SF+AGELSP L+ +R D + + G A N++ +G P ++
Sbjct: 1 MARATIVRNSFNAGELSP-LMAARVDQARYPNGCASLCNMLLHPHGGAWRRPGLRFMGLA 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
R+ F + +L FG + L+I +TP+ + +
Sbjct: 60 ADPAGPVRLIPFVFSEAQAYVLEFGPRSLRIWHGGGLVLGGDGE-PFRLETPWAGEQLTA 118
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL 180
L + V PP L D + ++ FLP +G+ VK
Sbjct: 119 LRWCQSADMLYLVSHAGPPRRLERHGHAD---WRLVDVSFLPGVSPPEGLHCTVKPAGSR 175
Query: 181 SISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLT 240
+ + T+ R + + + P + P ++ + ++ V D YR
Sbjct: 176 TWTYVVTAVHRESGEESLPTPPLQVT------GPDALSQTASVTLAWTPVQDAGEYRVYR 229
Query: 241 TGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGR 300
G +G+ A GA Y G D
Sbjct: 230 AGGGASVYGFLGSA--------------------------GAGETYTDTGRTPDFDAG-- 261
Query: 301 SISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSF 360
P+++ F +PS F RL F+G++ +++ S
Sbjct: 262 ----PPEARNPFSGEGD--------------WPSCAVFWQQRLCFAGTRNGPQTIWASRS 303
Query: 361 GAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSK 420
GA+ +FS+ D A+T + + S + W+ P +LVG W LS +
Sbjct: 304 GAYGNFSVSRPLRDDD---AVTVTIAADTVSAVRWLMP-ARRLLVGTGGGEWTLSGQGEQ 359
Query: 421 ---GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLA 476
LS R S G P+SVGD ++ + GR ++ S + G+ ++T LA
Sbjct: 360 PFSPLSCSLERQSSRGSGDVQPLSVGDAVLALQRGGRVVREFRYSLDVDGYAGTDLTILA 419
Query: 477 DHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKH 535
+HL +RI+ +Q+ P VW V E L+ E E WH H+
Sbjct: 420 EHLTRGRRIIDWAWQQSPSGTVWCVTEDGG-----LIAMTRIPEHE-VAGWHRHVTDGA- 472
Query: 536 YVLSAASFPNDNRGGTSLWMLVAL-SAGEERSFTVRLN 572
VLS + P G LW+ V G R RL+
Sbjct: 473 -VLSVCTIPG--TAGDELWVAVRREGGGMVRCCIERLD 507
>gi|218886166|ref|YP_002435487.1| hypothetical protein DvMF_1065 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757120|gb|ACL08019.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 692
Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats.
Identities = 125/579 (21%), Positives = 206/579 (35%), Gaps = 75/579 (12%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M TT ++SF+AGELSP L+ +R D + +A G RN++ +GP P ++ C
Sbjct: 1 MARTTLIQNSFNAGELSP-LMAARGDQARYASGCRVLRNMLLHPHGPAFRRPGLRFMGAC 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
+ R+ F +G +L F ++L++ R PY + +
Sbjct: 60 VDETVPPRLVPFVFNEGQAYVLEFAPERLRVW-WRGGLVLGEGGAPLVVPAPYAAEHLPT 118
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL 180
L + V P L D + + F P G+ S +
Sbjct: 119 LRWCQSADVLYLVTPHAAPRKLERHGHAD---WRLVAVNFGPRVATPTGLRSTGAPSGTR 175
Query: 181 SISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLT 240
T+ + T + + L A+ + ++ V YR
Sbjct: 176 QHRYVITAVSVDTGEESLPTAE-------LAVTAGTPAEGSAVNLAWTAVEGASEYRVYK 228
Query: 241 TGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGR 300
G +G A + Y G D ++
Sbjct: 229 AGGGASVYGLLGTAATGE--------------------------TYADTGRTPDFAEG-- 260
Query: 301 SISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSF 360
P+ + F+ + YPS V F RL F+GS+ +++ S
Sbjct: 261 ----PPEHRNPFEG--------------TDDYPSSVQFWQQRLCFAGSRSHPQTIWASRT 302
Query: 361 GAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSK 420
G + + + D A+T + + S + WM P +LVG W LS S+
Sbjct: 303 GCYENMDVSRPLQTDD---AVTVTIASETVSAVRWMMP-ARKLLVGTGGGEWTLSGQGSE 358
Query: 421 ---GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLA 476
LS S G PP++VGD ++ V GR ++ S + G+ + T LA
Sbjct: 359 PFSPLSCLLEFQSARGSAELPPLAVGDGVLAVQRGGRAVRDFRYSLDVDGYSGADQTILA 418
Query: 477 DHLFNQR-ILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKH 535
+H+ R I+ YQ+ PHS+VW ++ + G AE + WH H
Sbjct: 419 EHMLRGRNIVDWAYQQSPHSVVWCAMDDG-----TMAGLTLIAEHQ-VAGWHRHDTGGAV 472
Query: 536 YVLSAASFPNDN-RGGTSLWMLVALS-AGEERSFTVRLN 572
L P + GG LW++V G +R + RL+
Sbjct: 473 EALCVVPGPPSDPAGGDELWLVVRRDVDGVQRRYIERLD 511
>gi|282848883|ref|ZP_06258273.1| hypothetical protein HMPREF1035_1392 [Veillonella parvula ATCC
17745]
gi|282581388|gb|EFB86781.1| hypothetical protein HMPREF1035_1392 [Veillonella parvula ATCC
17745]
Length = 772
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 107/610 (17%), Positives = 225/610 (36%), Gaps = 70/610 (11%)
Query: 6 WTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPR 65
++ +F+ GE+SP + SR DL + + ++ N++ YG + Q + +
Sbjct: 7 ISQLAFTTGEVSPDV-SSRFDLEQYKSALLEAENVVIRPYGAVAKRQGSQYVGQVKYSDK 65
Query: 66 SNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAV 125
R+F F+ +L FGDK +++ T G TP+T L +
Sbjct: 66 PTRLFEFTTNTNNSFMLEFGDKYIRVWNYGVYT-------GIEVTTPFTSDILFDLNCSQ 118
Query: 126 FGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQA 185
G +P L D D + + K P+ + V S ++
Sbjct: 119 SGDVMFICSGKYPIQTLSRYSDTD---WRLEAYKLTEQPYDTIN--TDVNSTVTVTGDTI 173
Query: 186 DTSTARITSDM-------------------KIFKPLDKGRSIRLGCHPPEWAKNTNYSIG 226
+S +DM + RS G + N NY++
Sbjct: 174 RSSKDLFNADMVGMVMQLGYFVAAVHTKNTGTVVEKKEKRSFMGGFNKWNEYNNINYNVE 233
Query: 227 AYIVADDKVYRSLT----TGRSGDRFGYSKGATYVK--------DNNITWITVLNLSSKT 274
+Y D ++ T TG + + G T+ D N+T + ++K
Sbjct: 234 SYSTDQDLAWKFTTHGTWTGTVKLQITTNNGTTWKDYRTYSSNNDYNVTDAGKIEPNAKL 293
Query: 275 SRES--------ASGAVAPYYVWGDIK-DVSKDGRSISVAPQSQTLFQAGVSVVSWFMSA 325
+S ++ PY WG ++ D +++ + + + S W M +
Sbjct: 294 RIQSDIKSGECNVDLSILPYTTWGIVEFKEFVDSKTMKINILNGIVENEATS--KWKMGS 351
Query: 326 WGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAV 385
WG GYP TF+ +R + + + + +++S G + +F ++ G ++T V
Sbjct: 352 WGRSNGYPKLCTFYQDRFVVAATNKNPNYIWMSRTGDYPNFGVEKVEGTITDDSSITLPV 411
Query: 386 TDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLS-KGLSIDFRRVSGSGVYACPPVSVGD 444
+ I + P + +++ + W++S + + + + + G +C P +G+
Sbjct: 412 INRKMYEIRHLVPAND-LIILTSGNEWIVSGDKTITPTNCNLKTQTQRGALSCEPQFIGN 470
Query: 445 CLVFVCGVGRRIKYISGSTE-QGFRFNEITQLAD-HLFNQRILQLVYQEEPHSIVWVVLE 502
VFV G ++ + S E + ++T + + Y ++P SI++ +
Sbjct: 471 RCVFVQERGGTVRDMGYSYESDNYTGQDLTLFVKTRVRGYLTITSAYAQDPDSIIYYIRN 530
Query: 503 PKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVALS-A 561
+ + C + + W H +++ Y+ + SL+ L+ +
Sbjct: 531 DGE------INCLTYIPEQKVYGWS-HFVTNGKYLYCESV---SEGEQDSLYTLIERTLQ 580
Query: 562 GEERSFTVRL 571
G++ R+
Sbjct: 581 GKKVKCIERM 590
>gi|262043657|ref|ZP_06016766.1| hypothetical protein HMPREF0484_3785 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259038995|gb|EEW40157.1| hypothetical protein HMPREF0484_3785 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 758
Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats.
Identities = 118/614 (19%), Positives = 199/614 (32%), Gaps = 75/614 (12%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M K SF+AG LSP ++ + D A V +N IPL GP Q
Sbjct: 1 MSKIRPIKRSFNAGILSP-VMYGQVDFDKWASAVKYMKNFIPLPQGPARRRGGTQYAGSV 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDN-- 118
+ + SF +L FG ++ + TP+ D
Sbjct: 60 KNSSDRVWLASFQFSTTEAFILEFGPGYIRFWFNHAQL-LDDENNILEVSTPWGAGDLTR 118
Query: 119 ---KSLEYAVFGSTAVFVH--KDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLG-DGMIS 172
L ++P + L +++ E F P+ + S
Sbjct: 119 NGKFGLSLQQSADVIYITCTNGNYPVYKLTR---NTNTNWSLAEASFSGGPFADINSDKS 175
Query: 173 GVKSNAKLSISQAD-----------TSTARITSDMKIFKPLDKGRSIRLGC--------- 212
V + I D TS IT++ IF+ L G +
Sbjct: 176 SVVYTDQFRIWSEDGNDLPDGTPTTTSLCNITANTDIFQALHVGCLFYIEASTDAVDDDT 235
Query: 213 ----HPPEWAKNT--NYSIGAYIVADDKVYRSLTTGRSG-DRFGYSKGATYVKDNNITWI 265
+ P WA T +S G + +D K Y + ++G + ++ GA
Sbjct: 236 GHSGYIPAWAAGTTETFSTGVFCRSDGKYYEDMDGTKTGNTQPTWTAGAHRDGSGG---- 291
Query: 266 TVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSA 325
+ + G + S G+ ++ P S + +
Sbjct: 292 ------DASLWRYSGGGWGIIEITAVNSATSATGKIVTELPPS--VRNTVGKTYKYAFGD 343
Query: 326 WGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAV 385
W + YP F RL+F+G ++ S G +FS + ++ +
Sbjct: 344 WSDVLRYPQFAAFFRGRLVFAGR----QKIWSSVAGDLQNFSPMTNGYEAESDDSINDRI 399
Query: 386 TDFSASTIHWMHPFGEGVLVGCDTSLW------LLSISLSKGLSIDFRRVSGSGVYACPP 439
D + T+ W+ + +G + L S+ + ++ G
Sbjct: 400 -DDTQDTMQWLVASAGKIFIGTAGYEFSYGEQSLTSVFGAGNTKVELNSTI--GSNEVQA 456
Query: 440 VSVGDCLVFVCGVGRRIKYISG-STEQGFRFNEITQLADHLFNQRILQLVYQEEPHSIVW 498
+ D + FV GR++ + S F LA HLF I+ L YQ+EP+ I+W
Sbjct: 457 ERLFDRVAFVQRAGRKVMIAAYDSGSDSFSATNSCILAPHLFTSEIIALAYQQEPNRILW 516
Query: 499 VVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVA 558
V+LE + AE + WH H V S P+ + G LWM+V
Sbjct: 517 VLLEEGKLLGL-----TYDAE-QNITGWHEHATGGA--VESIKVIPDIDGGRDELWMVVK 568
Query: 559 LS-AGEERSFTVRL 571
+ G + +
Sbjct: 569 RTINGATVRYLEYM 582
>gi|294648405|ref|ZP_06725904.1| phage protein [Acinetobacter haemolyticus ATCC 19194]
gi|292825710|gb|EFF84414.1| phage protein [Acinetobacter haemolyticus ATCC 19194]
Length = 706
Score = 405 bits (1040), Expect = e-110, Method: Composition-based stats.
Identities = 123/583 (21%), Positives = 203/583 (34%), Gaps = 56/583 (9%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M K++F++GELSP + R DL + G + N +P+ G L
Sbjct: 1 MAKINLIKNNFTSGELSPHIWM-RTDLQQYRNGTKEMLNFLPIIEGGLKRRGGT---EAL 56
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
+ + R+ F I LL+F ++ ++ + + K+ TPYT +D K
Sbjct: 57 AITAGAIRILPFIISHSTAYLLIFKPNQIDVLDINGTVV-------KSLSTPYTAQDIKE 109
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL 180
+ Y H HP L D ++++D F PP + V++ A
Sbjct: 110 ISYTQNRYQFYIAHSKHPLAWLR--ASEDLTNWSYDPFDFYVPP------LEEVETPALP 161
Query: 181 SISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLT 240
S + T + D + + G N Y A + T
Sbjct: 162 LKSNEKNAGKVATLTASPYNIYDNSKRYQAGEICHHTINNVKYYFRALRITQGNTPSFGT 221
Query: 241 TGRSGDRFGYSKGATYVKDNNITWITVLNLSS-KTSRESASGAVAPYYVWGDI-KDVSKD 298
+G Y + T + T V V+P V G+I +S D
Sbjct: 222 SGPEASPDYYWETTTVTEAQAFTAADVDKFVFINEGIVRIDTYVSPSTVTGEILVKLSTD 281
Query: 299 GRSISVAPQSQTLFQAGVSVVSWFMS--AWGEQEGYPSHVTFHNNRLLFSGSKGDELSVY 356
+I+ +W + + GYP VT + RL+ +G+K V+
Sbjct: 282 IEAIAN---------------AWTLKQDIFEVSLGYPRAVTMYQQRLVIAGTKTYPNYVW 326
Query: 357 LSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSI 416
LS G +F + T + + + + + ++ + L + S
Sbjct: 327 LSRVGDVTNFLP-----TTSDGDSFTVSASSDQLTNVLHLAQSRGICVMTGGSELVISSQ 381
Query: 417 SLSKGLSIDFRRVSGSGV-YACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQ 474
+ + + G P+ VG L+FV RI+ + NE+T
Sbjct: 382 NSMTPTNTSILEHTSFGSTENIKPIKVGSELIFVQRGAERIRTLLYDYSIDSLTSNELTV 441
Query: 475 LADHLFN--QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMIS 532
LA H+ ++VY EP SI+W VL +L + E + AW TH I
Sbjct: 442 LASHIAKKSGGFKEMVYCAEPDSIIWFVL-----GNGKLASLTLNRE-QSVIAWSTHDIG 495
Query: 533 DKHYVLSAASFPNDNRGGTSLWMLVALSAGEERSFTVRLNLLD 575
VLS S P+ G L+ LV + + LLD
Sbjct: 496 GT--VLSLTSLPS-TTGADRLYFLVNRNGTVQIEQMKEELLLD 535
>gi|298485990|ref|ZP_07004064.1| predicted phage protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298159467|gb|EFI00514.1| predicted phage protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 716
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 109/581 (18%), Positives = 206/581 (35%), Gaps = 44/581 (7%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M T + +F+AGELSPR+L R D++ + G N PL +G +
Sbjct: 1 MAKLTLIQTNFTAGELSPRML-GRVDIARYQNGAKVIENAWPLVHGGVTRRNGTLFCAAA 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
+ R R+ + ++ FGD ++I G +PY +
Sbjct: 60 KFPDRRARLVPYVFNTEQAYMIEFGDFYIRIYYPNG------GWTGVELASPYGQTMLAA 113
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL 180
LEY T H P + L I ++ F+ P+ GM
Sbjct: 114 LEYVQGADTMFLFHGRVPIYRLKRIS---NTEWSLAPAPFVTTPFEERGMDFAFAMAIT- 169
Query: 181 SISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAK-NTNYSIGAYIVADDKVYRSL 239
+ A + + +T F D GR I G ++ S+ ++ S
Sbjct: 170 --NPAAGAASTVTPGAPAFFISDVGREIWAGSGIARITAFGSSGSVSVLVINAF----SQ 223
Query: 240 TTGRSGDRFGYSKGA-TYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKD 298
T + G + T + + L L + R G
Sbjct: 224 TLYPTWSLKGSPQTTCTASAFSPVGATVTLTLGAAGWRPEDVGKFVKLNGGLFQISGFTS 283
Query: 299 GRSISVAPQSQTLFQAGVSVVSWFM--SAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVY 356
++ +S +W + S W + +GYPS T + RL+ +GS +++
Sbjct: 284 STVVNAVIRSIATSVVAAPAGAWSLEASVWNDFDGYPSTGTLYEQRLVAAGSPNYPQTIW 343
Query: 357 LSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCD-TSLWLLS 415
S G + +F L + A++ V+ + I MH LV + ++
Sbjct: 344 ESRTGEYLNFELGTK-----DDDAMSFNVSSDQINPI--MHVGQVKALVTLTYGGEFTVT 396
Query: 416 ISLSK---GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNE 471
+ K +I + S G P+ +G+ L FV GR+++ ++ + + +
Sbjct: 397 GGVEKPITPTNIQIKNQSVYGCNGVRPIRIGNELYFVQRAGRKLRAMAYKYDSDSYGSPD 456
Query: 472 ITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMI 531
++ L++H ++ + +Q+EP SI+++V S + + + W +
Sbjct: 457 MSVLSEHATKSGVVDMAFQQEPESILFMVR-----SDGVMATMTVDRD-QDVVGWARQVT 510
Query: 532 SDKHYVLSAASFPNDNRGGTSLWMLVALSA-GEERSFTVRL 571
+ S A P+ G +W +V + G+ + R
Sbjct: 511 DGAY--ESVAVIPSAE--GDQVWAVVRRTVNGQNVRYLERF 547
>gi|46580124|ref|YP_010932.1| hypothetical protein DVU1714 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46449540|gb|AAS96191.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233883|gb|ADP86737.1| hypothetical protein Deval_1582 [Desulfovibrio vulgaris RCH1]
Length = 697
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 126/582 (21%), Positives = 205/582 (35%), Gaps = 81/582 (13%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M + +F+ GE+SP LL +R D + G RN +PL GP+ P ++
Sbjct: 1 MGTIYPVQQAFNGGEISP-LLTARADQIRYQTGALTMRNAVPLAQGPVTRRPGLRFMGAA 59
Query: 61 RL-DPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNK 119
+ R+ SF L FG +++ + + + +PY D
Sbjct: 60 KEQGAGPVRLVSFVFSAAQSRALEFGPGYVRVWMDAGLVSKNGQPY--EVASPYGAADIA 117
Query: 120 SLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLP----PPWLGDGMISGVK 175
L +A ++HPP L D D + F F+P P L G +
Sbjct: 118 GLRFAQSADVIYIASRNHPPRKLSRHADDD---WRFITPTFMPTQAAPGALTLGTLGTTP 174
Query: 176 SNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKV 235
+ S T+ + T + + P G W + + ++ + + +V
Sbjct: 175 GPGNETYSYKVTAVSATTGEESLASPE--GTITTTAMSSTYWVRVSWAAVPGAV--EYRV 230
Query: 236 YRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDV 295
Y+ G G G T+ D NI GA V
Sbjct: 231 YK-RRYGVFGFIGRAVGGDTFFDDRNI------------------GADTEDTV------- 264
Query: 296 SKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSV 355
P+++ F A YP V F RL F+GS L+V
Sbjct: 265 ----------PEAKNPFTAAGE--------------YPGLVFFWQQRLGFAGSDKRPLTV 300
Query: 356 YLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLS 415
+LS AF + + D +A + + W+ + +G + W LS
Sbjct: 301 WLSQSAAFENLAASRPPQDDDGIEA---TLAGQRQNRFVWI-EGDRTLCLGTEGGEWTLS 356
Query: 416 ISLSK---GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNE 471
S+ F+ G P V GD L++V G ++ + S E G+ +
Sbjct: 357 GQEGGPVTPTSLQFQSHGVRGSEGVPAVRAGDSLLYVQRGGGVVREFTYSFERDGYVAPD 416
Query: 472 ITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMI 531
+T L L +++ YQ+ PHSIVW VL+ L F E + WH H
Sbjct: 417 LTLLTGVLRGRKVRAWAYQQSPHSIVWCVLDDG-----TLAALTFLREHD-VVGWHRHDT 470
Query: 532 SDKHYVLSAASFPNDNRGG-TSLWMLVALS-AGEERSFTVRL 571
++ + GG ++WMLV + G+ER + R+
Sbjct: 471 DGVVEDVTVIPGGDATAGGTDTVWMLVRRTVGGQERRYVERM 512
>gi|292670776|ref|ZP_06604202.1| hypothetical protein HMPREF7545_1740 [Selenomonas noxia ATCC 43541]
gi|292647397|gb|EFF65369.1| hypothetical protein HMPREF7545_1740 [Selenomonas noxia ATCC 43541]
Length = 762
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 119/601 (19%), Positives = 211/601 (35%), Gaps = 65/601 (10%)
Query: 7 TKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRS 66
K SF+ GEL+P L R DL + G + +N+I LRYG P + + +
Sbjct: 9 LKPSFAGGELTPALY-GRTDLQKYDVGASTLKNMIVLRYGGATRRPGFRHVAKTQ-GGKR 66
Query: 67 NRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVF 126
R+ F +L F +++ A T YT D ++Y
Sbjct: 67 ARLIPFQYSTEQSYVLEFTAGCIRVFTKGGIVVKDDAPLVIP--TSYTEADLSDIKYTQS 124
Query: 127 GSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQAD 186
VH +HPP L D + F+ + P+ G+K +
Sbjct: 125 ADVLFLVHVNHPPMTLTRYGVTD---WKFERMDIAGGPFEDPNTKDGLKI-----GASGV 176
Query: 187 TSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKN--TNYSIGAYIVADDKVYRSLTTGRS 244
+ + + F G IRLG K+ + V VY +
Sbjct: 177 QGEITLKASVDYFTEDMVGSLIRLGHTMSGQLKSGIPTTPLVVRCVPSGTVYVESFGFWN 236
Query: 245 GDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYY----------VWGD--- 291
G + + + T + G Y VW +
Sbjct: 237 GSFIVEKHDKSTDTWIALQEQHANRTQNYTLNYTNKGDDIVEYRVRSEKFDTSVWSNENE 296
Query: 292 -----------------IKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPS 334
+ ++ + S A + + +SAW ++GYP
Sbjct: 297 RQRGYVTIQTFAQDYYGVARITAVNSATSAAATVTRELADTEATNDFSLSAWSAKKGYPQ 356
Query: 335 HVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIH 394
V+F +RL+F+GS+ + + S G +Y+F ++ D A+T ++ + I
Sbjct: 357 AVSFFEDRLVFAGSRAKPQTYWASQSGDYYNFWVNTPQQDSD---AITGTLSGGQMNGIR 413
Query: 395 WMHPFGEGVLVGCDTSLWLLSISLS--KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGV 452
+ PFGE +++ + + + G+ PV +G +V+V
Sbjct: 414 AIIPFGEMLML-TSGGEYKVGGGNETFTPTNQKAEPQEYRGINNLTPVVIGGRIVYVQHQ 472
Query: 453 GRRIKYISGSTE-QGFRFNEITQLADHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSFPR 510
G I+ ++ S + + ++++ LA HLF I+ L YQ+ P+++VW V E
Sbjct: 473 GSVIRDLTYSYDVDKYTGDDVSLLAAHLFEGHTIVALAYQQTPNTVVWCVREDG-----A 527
Query: 511 LLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVALSAGEERSFTVR 570
LLG + E + +AWH H + K + D LW +V + +
Sbjct: 528 LLGMTYIKE-QDVYAWHKHTTAGKFTD--VCTISGDR--EEELWAVVERDGAH---YVEQ 579
Query: 571 L 571
+
Sbjct: 580 M 580
>gi|225157020|ref|ZP_03724959.1| hypothetical protein ObacDRAFT_8085 [Opitutaceae bacterium TAV2]
gi|224802748|gb|EEG20999.1| hypothetical protein ObacDRAFT_8085 [Opitutaceae bacterium TAV2]
Length = 773
Score = 398 bits (1023), Expect = e-108, Method: Composition-based stats.
Identities = 115/617 (18%), Positives = 209/617 (33%), Gaps = 77/617 (12%)
Query: 9 HSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNR 68
++F+AGE +P+L R DL + + N+ + YG + +R
Sbjct: 7 NNFTAGEWTPKL-DGRSDLQKYDAACRRLENMRVMPYGGARFRSAFGYVAKTKSAATPSR 65
Query: 69 VFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVFGS 128
+ F +L + L++ S +PAL + +PY +++Y
Sbjct: 66 LMPFQFSTEQKFMLEWAHLALRVY----SAGAAPALL-QEIASPYPAAAVFAIQYRQIND 120
Query: 129 TAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQADTS 188
VH D+P L D D + + + + PP L + + KLS+S D
Sbjct: 121 VVYLVHPDYPVQRLARHADAD---WRLEAVDWAFPPMLDENVTET-----KLSLSAVDGV 172
Query: 189 TARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSI---GAYIVADDKVYRSLTTGRSG 245
+T+ +F+P G L + + + + G + A V T S
Sbjct: 173 NVTMTASAALFQPGHVGSYWELRHLKEAASTSVSLATTSGGPFHSAAISVQGDWTA-NST 231
Query: 246 DRFGYSKGATYVKDNNITWITVLNLSSKTSRE-SASGAVAP-------YYVWGD------ 291
+R+ + D TW TV ++++ R SASG Y GD
Sbjct: 232 ERWYGTLSIERSLDGGTTWETVRKFTAESDRNISASGHQEELAQFRLKYQPTGDPFGAGV 291
Query: 292 -------------------------IKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAW 326
+ V+ S V + W SAW
Sbjct: 292 WVGKAPTNYVKARAMLETTDAYVTALVKVTAYTDSTHVKVTVIDKAATVAATDIWCESAW 351
Query: 327 GEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVT 386
G+P + + RL+F G++ +++ S F +F D A+
Sbjct: 352 SPYRGFPRTIGLYEQRLIFGGTRHQPNTMWGSKTDDFENFK-----YGEDDDAAVAYTFA 406
Query: 387 DFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGL---SIDFRRVSGSGVYACPPVSVG 443
+ + W+ + + + + L +I R S +G PV V
Sbjct: 407 ASEQNNVQWVESLKRIQAATTAREFTVAAGNTDEPLTPSNIVVRSESANGAAHLQPVLVN 466
Query: 444 DCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLADHLFNQRILQLVYQEEPHSIVWVVLE 502
D +++V R++ ++ S E G+ ++T LA + + QL + +P ++ V E
Sbjct: 467 DAILYVERQSRKVMEMAYSIEKDGYASVDLTLLAAPVTESGVKQLAFARQPDPLLLAVTE 526
Query: 503 PKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVALS-A 561
+ L + + AW + + S A+ +W +V +
Sbjct: 527 NGN-----LAVLTYDRP-QDVTAWARWITNGAF--ESVATLQG--TPEDEIWAVVRRTIG 576
Query: 562 GEERSFTVRLNLLDDFK 578
G RL D K
Sbjct: 577 GVPVRTIERLTPETDSK 593
>gi|262043403|ref|ZP_06016528.1| hypothetical protein HMPREF0484_3546 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039229|gb|EEW40375.1| hypothetical protein HMPREF0484_3546 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 664
Score = 391 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 107/583 (18%), Positives = 200/583 (34%), Gaps = 108/583 (18%)
Query: 3 NTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRL 62
K +F+AGE+SPRL+ R D+ +A G N + + G ++ P Q +
Sbjct: 2 RANLIKTNFTAGEISPRLM-GRVDIDRYANGAKTLENSVVVVQGGVMRRPGSQFVAATKY 60
Query: 63 DPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLE 122
+ +R+ + +L FGD L+I +PYT S+
Sbjct: 61 GDKKSRLIPYVFNRTQAYILEFGDGYLRIYQDGKQLVNDD-NTPYEIASPYTSDMLPSVN 119
Query: 123 YAVFGSTAVFVHKDHPPHHLLYIQDGDK-------ISFTFDEIKFLPPPWLGDGMISGVK 175
Y T VH+D P+ L D I FDE++ P W + V
Sbjct: 120 YVQGADTMFLVHQDVKPYRLQRRGQTDWVLEPAPFIVEPFDEVRDTPQKWCKPSVKEFVG 179
Query: 176 SNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYS--IGAYIVADD 233
S L ++ D D PP + + +G+Y+ +
Sbjct: 180 SEITL----------TLSDDEPPEGSED----------PPPFTGDGWVPEDVGSYVRINS 219
Query: 234 KVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIK 293
++ + S TS + A G +
Sbjct: 220 --------------------------------GLVLIKSVTSAQVAVGTIRT-------- 239
Query: 294 DVSKDGRSISVAPQSQTLFQAGVSVVSWFM--SAWGEQEGYPSHVTFHNNRLLFSGSKGD 351
D+S S +W S W ++ GYP VT + RL+ +GS
Sbjct: 240 DLSAT---------------QAASPGAWTREDSVWTDEFGYPGAVTLYQQRLVLAGSPRY 284
Query: 352 ELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSL 411
+++ S G + F L D A++ ++ + I + + +
Sbjct: 285 PQTIWWSESGVYLSFELGT-----DDDDAISFTLSSDQLNPIVHLAQMNTLIALTYGGEF 339
Query: 412 WLLSISLS--KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTEQ--GF 467
+ + + + +I + S G PV VG ++FV GR++ ++ + +
Sbjct: 340 TITAGNDAAITPTNISVKNPSPYGCNGIRPVRVGTEIMFVQRSGRKLYAVAYDPDSYVAY 399
Query: 468 RFNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWH 527
N++T LA+H+ ++ + YQ++P + W+V ++ + AW
Sbjct: 400 SANDMTVLAEHITEGGVIDMAYQQQPDAFTWLVRNDG-----VMVTMAIDR-AQNVVAWS 453
Query: 528 THMISDKHYVLSAASFPNDNRGGTSLWMLVALSA-GEERSFTV 569
+ S S A+ P+ ++ +V + G+ +
Sbjct: 454 RQITSGAF--ESVATIPSAT--DDVVYAIVRRTVNGQTVRYVE 492
>gi|303328570|ref|ZP_07359005.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
gi|302861336|gb|EFL84275.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
Length = 696
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 105/582 (18%), Positives = 193/582 (33%), Gaps = 88/582 (15%)
Query: 7 TKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRS 66
++ + GE++P L++ R D + G + RN +P+ G + P + D +
Sbjct: 6 IQNVLNGGEITP-LMRGRVDQPRYGTGAREMRNFVPMPQGGVTRRPGTRFLGMAHGD--A 62
Query: 67 NRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVF 126
R+ F +L FGDK L++ + K +++PY D L +A
Sbjct: 63 ARLIPFVFSATQGRMLEFGDKTLRVWLPDGRLVADENGEPKVFESPYAVGDLHELRFAQS 122
Query: 127 GSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGV------KSNAKL 180
H+ + P L D D + + E+ F+P D + V NA
Sbjct: 123 ADVVYLAHQGYAPRRLSRHADDD---WRWSELAFVPAIAAPDNVSLQVIDRGYNGDNATR 179
Query: 181 SISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLT 240
+ A T+ T
Sbjct: 180 VYTYAVTAVDEKTGQESGAGAE-----------------------------------VSI 204
Query: 241 TGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGR 300
T ++ + Y A + + V G + D +
Sbjct: 205 TAKALNSVSYIIRAAWPAVEGAAYYRVYKKKYGV-----FGYIGRSDAECSFDDENIGAD 259
Query: 301 SISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSF 360
+ P+ + F + +PS V FH RL ++ + ++++LS
Sbjct: 260 TEDTPPEHKNPFASEGD--------------WPSQVFFHQQRLGWAATANRPITIWLSRP 305
Query: 361 GAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLS- 419
G F + D A+ + A+ I W+ P + + G + S W LS
Sbjct: 306 GDFEIMAASTPPKDDD---AIEATLAATQANRIVWLQPDRQSLTFGTEGSEWTLSAGEGV 362
Query: 420 --KGLSIDFRRVS-GSGVYACPPVSVGDCLVFVCGVGRRIKYISGST-EQGFRFNEITQL 475
++ F + G A VSVG ++++ G+ ++ + + + ++T L
Sbjct: 363 ALTPSNVSFEMQTANGGDNATQAVSVGGGVLYLQRGGKAVRQFAYNYSADKYLGQDVTIL 422
Query: 476 ADHLFNQRIL-QLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDK 534
A H+ ++ +Q+EP++++W L S L G + E + WH H +
Sbjct: 423 ARHILRDAVVTAWAFQQEPYAVLWCAL-----SDGTLAGLTYMPE-QDVMGWHRHDTDGR 476
Query: 535 HYVLSAASFPNDNRGGTSLWMLVALSAGEERSFTVRLNLLDD 576
A+ P W LV G RL+ D
Sbjct: 477 F--EDVAAMPG--TPDDQTWFLVRRGCG---LCVERLDSFFD 511
>gi|78357587|ref|YP_389036.1| hypothetical protein Dde_2545 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219992|gb|ABB39341.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 700
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 114/591 (19%), Positives = 199/591 (33%), Gaps = 91/591 (15%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRD- 59
M T T++SF+ GELSP LL SR D + G RN+ +G V P M+
Sbjct: 1 MSRITLTRNSFNGGELSP-LLSSRIDQQRYTAGCRTLRNMTVYPHGAAVRRPGMRHMGTG 59
Query: 60 ---CRLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFK 116
+ R+ F +L G+ +++ + +TP+
Sbjct: 60 LSLQPAGSAAVRLVPFVFSQEQAYVLELGEGVMRVWKDDGLVVSADGS-PVCVETPWKGD 118
Query: 117 DNKSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKS 176
+SL+Y V + P L D + ++F G+ +
Sbjct: 119 ALQSLQYCQSADVMYLVCRQCAPRKLARHAHDD---WRITLLEFGAGLPAPQGLTAAAGG 175
Query: 177 NAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVY 236
A+ + T+ A + + + ++ +
Sbjct: 176 AAEREYAYVVTAVAPDGGEESLPSEAVNVT------------AAASLNVRDMVR------ 217
Query: 237 RSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVS 296
+TW V + +S +G + Y+
Sbjct: 218 -------------------------LTWQPVEGAGAYCVYKSIAGGGSYGYI-------- 244
Query: 297 KDGRSISVAP-QSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSV 355
G++ V + + + + + + +P V F+ RL F+G+ ++
Sbjct: 245 --GKAAGVPAYEDRGAEPDFGQGPPEYRNPFDGEGRWPGCVQFYQQRLCFAGTDEKPQTI 302
Query: 356 YLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLS 415
+ S + ++ D A+T + + I WM P +LVG W LS
Sbjct: 303 WCSQSANYESMNISSPLRDDD---AVTVTIAADRVNRIRWMMP-ARRLLVGTAGGEWQLS 358
Query: 416 ISLSKGLS---IDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNE 471
S L+ RR + G P+ +G ++FV GR ++ + E G+ +
Sbjct: 359 GSGDAPLTPVDAQLRRDTMHGSAGLMPLVIGQSILFVQRDGRTVREFRYALESDGYDAGD 418
Query: 472 ITQLADHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHM 530
+T LA+HL +RI+ YQ+ P S+VW L S L F E E WH H
Sbjct: 419 LTILAEHLMRGRRIVSWCYQQSPASVVWCAL-----SDGTLAAMTFLREHE-VVGWHRHD 472
Query: 531 ISDKHYVLSAASFPNDNRGGTSLWMLVAL---------SAGEERSFTVRLN 572
+V + + P D G +W+ V + EE RL
Sbjct: 473 TDG--FVEAVTAIPGDE--GDEVWLSVRRVRVLHDENGTRQEEVRSIERLE 519
>gi|169795391|ref|YP_001713184.1| phage-like protein [Acinetobacter baumannii AYE]
gi|169148318|emb|CAM86183.1| hypothetical protein; putative phage related protein [Acinetobacter
baumannii AYE]
Length = 697
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 124/565 (21%), Positives = 206/565 (36%), Gaps = 67/565 (11%)
Query: 6 WTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPR 65
K++ S+GELSP LL +R D+ +A G K N +PL G P + +
Sbjct: 10 ILKNNLSSGELSP-LLWTRTDIQQYANGAKKLLNALPLVEGGAKKRPGTKFRS---IFAG 65
Query: 66 SNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPY-TFKDNKSLEYA 124
+ R+ F LL+ G L++ R+ TPY T + + ++YA
Sbjct: 66 ALRLIPFIANSENTYLLILGVSFLKVYNPRTYAV------VYETVTPYNTAQKVREVQYA 119
Query: 125 VFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQ 184
FV D P LL D F P LG S +++S
Sbjct: 120 HTKYRMYFVQGDTPVQRLLCSADFTNWQFAAFTFGVNPNDELG--------STPNVALSP 171
Query: 185 ADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRS 244
+ T ++ S P W+ Y G ++ + K +R+ +
Sbjct: 172 SGTEVGKVIS--------------LTASSFPNWSNTETYLTGDRVIHNSKTWRA-----T 212
Query: 245 GDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISV 304
D G AT + W V N ++ ++ G++ + G +++ V
Sbjct: 213 ADNKGVEPSATTPE-----WEEVTNEAANVFTPASVGSIVE--INGGQVKITEYVDPSRV 265
Query: 305 APQSQTLFQAGVSVV--SWFMS--AWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSF 360
+ + V + SW + A+ + GYP V F RL+F+ +K ++ S
Sbjct: 266 NGEVLVKLTSDVQAIAKSWVLKSIAFSAEAGYPKAVCFFKQRLVFANTKTSPNQMWFSRI 325
Query: 361 GAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSK 420
G +F A + A + + I + G V + + S
Sbjct: 326 GDDGNF-----LETTQDADAFSIASSSAQSDNILHLSQRGGVVALTGGAEFLINSQGPLT 380
Query: 421 GLSIDFRRVSGSGV-YACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLADH 478
S + GV P VG+ L+FV G R++ +S E G E++Q+A H
Sbjct: 381 PASAQIDEHTSYGVQANVKPCRVGNELLFVQRGGERLRAMSYRYEVDGLVSPELSQIAPH 440
Query: 479 LFNQ--RILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHY 536
+ I +L +Q+ P+SIVW+V+ S L + AW H +
Sbjct: 441 IPENHAGIKELTFQQTPNSIVWIVMGDGAVSSITL------NRDQEMNAWSQHDFGGQ-- 492
Query: 537 VLSAASFPNDNRGGTSLWMLVALSA 561
VLS + P G +ML +
Sbjct: 493 VLSICALP-TGLGEDQCFMLTNRNG 516
>gi|212703239|ref|ZP_03311367.1| hypothetical protein DESPIG_01281 [Desulfovibrio piger ATCC 29098]
gi|212673505|gb|EEB33988.1| hypothetical protein DESPIG_01281 [Desulfovibrio piger ATCC 29098]
Length = 694
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 111/574 (19%), Positives = 199/574 (34%), Gaps = 82/574 (14%)
Query: 7 TKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRS 66
T++ + GE+SP LL+ R D ++ G + RN +P+ G + P + D
Sbjct: 6 TQNVLNGGEISP-LLRGRVDQPRYSTGAREMRNFVPMPQGGVTRRPGTRYLGTALGDGG- 63
Query: 67 NRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVF 126
R+ F +L FGD+ +++ + K +++P+ D +++ YA
Sbjct: 64 -RLVPFVFSATQGRMLEFGDRAMRVWLPDGRVVADEEGAPKIFESPFAAADLRAVRYAQS 122
Query: 127 GSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQAD 186
F H + P L D D + + E+ F+P + + K ++S
Sbjct: 123 ADVIYFAHPGYAPRKLARHADDD---WRWSELTFMPA----------IATPKKPALSTVG 169
Query: 187 T--STARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRS 244
T + + DKG+ P E A + ++ +
Sbjct: 170 TPEGDKKTDYTYCVTAIDDKGQ----ESSPSEPASISAQALNS----------------- 208
Query: 245 GDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISV 304
+ ++ T V G Y I D + +
Sbjct: 209 ---VDFHIRISWEAVEGATGYRVYKKKMGVFGYIGKGGADETY----IDDKNIGADTEDT 261
Query: 305 APQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFY 364
P+ + F+ + YPS V FH RL F+ S ++++LS G F
Sbjct: 262 PPEYEDPFEGEGN--------------YPSQVFFHQQRLGFAASNSRPITIWLSRSGEFE 307
Query: 365 DFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGLSI 424
+ D A+ + AS I W+ P + G + S W L S L+
Sbjct: 308 SMAKSTPPKDDD---AIEVTLAATQASRIVWLQPDRSALAFGTEGSEWTLEPSEGVALTP 364
Query: 425 DFRR----VSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGST-EQGFRFNEITQLADHL 479
+ G A +SVG +++V I+ + + + ++ LA H+
Sbjct: 365 ATASFQLQTTNGGSDAVAALSVGGSVLYVQRGAGAIREFAYNYSADKYLGQDLNILARHM 424
Query: 480 FNQ-RILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVL 538
++ +Q+EP++++W VL S L G + E + WH H +
Sbjct: 425 LRDVDVVAWSWQQEPYAVLWSVL-----SDGTLAGLTYMKE-QEIVGWHRHTTAGDFVD- 477
Query: 539 SAASFPNDNRGGTSLWMLVALSAGEERSFTVRLN 572
A P +W LV + F RL
Sbjct: 478 -VAGIPG--TPDDQVWFLVRRGG---QVFVERLE 505
>gi|332875218|ref|ZP_08443051.1| carbohydrate binding domain protein [Acinetobacter baumannii
6014059]
gi|332736662|gb|EGJ67656.1| carbohydrate binding domain protein [Acinetobacter baumannii
6014059]
Length = 692
Score = 388 bits (996), Expect = e-105, Method: Composition-based stats.
Identities = 125/565 (22%), Positives = 203/565 (35%), Gaps = 67/565 (11%)
Query: 6 WTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPR 65
K++ S+GELSP LL +R D+ +A G K N +PL G P + +
Sbjct: 5 ILKNNLSSGELSP-LLWTRTDIQQYANGAKKLLNALPLVEGGAKKRPGTKFRS---IFAG 60
Query: 66 SNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPY-TFKDNKSLEYA 124
+ R+ F LL+ G L++ R+ TPY T + + ++YA
Sbjct: 61 ALRLIPFIANSENTYLLILGVSFLKVYNPRTYAV------VYEAVTPYNTAQKVREVQYA 114
Query: 125 VFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQ 184
FV D P LL D F P LG S +++S
Sbjct: 115 HTKYRMYFVQGDTPVQRLLCSADFTNWQFAAFTFGVNPNDELG--------STPNVALSP 166
Query: 185 ADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRS 244
+ T ++ S P W+ Y G ++ K +R+
Sbjct: 167 SGTEVGKVIS--------------LTASSFPNWSNTETYLTGDRVIHTSKTWRATI---- 208
Query: 245 GDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISV 304
D G AT + W V N ++ S+ G++ + G +++ V
Sbjct: 209 -DNKGVEPSATTSE-----WEEVTNEAANVFTPSSVGSIVE--INGGQVKITQYVDPSRV 260
Query: 305 APQSQTLFQAGVSVV--SWFMS--AWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSF 360
+ + V + SW + A+ GYP V F RL+F+ +K ++ S
Sbjct: 261 NGEVLVKLTSTVQAIAKSWVLKSIAFSATAGYPKAVCFFKQRLVFANTKTSPNQMWFSRI 320
Query: 361 GAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSK 420
G +F A + A + + I + G V + + S
Sbjct: 321 GDDGNF-----LETTQDADAFSIASSSAQSDNILHLSQRGGVVALTGGAEFLINSQGPLT 375
Query: 421 GLSIDFRRVSGSGV-YACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLADH 478
S + GV P VG+ L+FV G R++ +S E G E++Q+A H
Sbjct: 376 PASAQIDEHTSYGVQANVKPCRVGNELLFVQRGGERLRAMSYRYEVDGLVSPELSQIAPH 435
Query: 479 LFNQ--RILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHY 536
+ I +L +Q+ P+SIVW+V+ S L + AW H +
Sbjct: 436 IPENHAGIKELTFQQTPNSIVWIVMGDGAVSSITL------NRDQEMNAWSQHDFGGQ-- 487
Query: 537 VLSAASFPNDNRGGTSLWMLVALSA 561
VLS + P G +ML +
Sbjct: 488 VLSICALP-TGLGEDQCFMLTNRNG 511
>gi|293609614|ref|ZP_06691916.1| predicted protein [Acinetobacter sp. SH024]
gi|292828066|gb|EFF86429.1| predicted protein [Acinetobacter sp. SH024]
Length = 692
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 125/565 (22%), Positives = 202/565 (35%), Gaps = 67/565 (11%)
Query: 6 WTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPR 65
K++ S+GELSP LL +R D+ +A G K N +PL G P + +
Sbjct: 5 ILKNNLSSGELSP-LLWTRTDIQQYANGAKKLLNALPLVEGGAKKRPGTKFRS---IFAG 60
Query: 66 SNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPY-TFKDNKSLEYA 124
+ R+ F LL+ G L++ R+ TPY T + + ++YA
Sbjct: 61 ALRLIPFIANSENTYLLILGVSFLKVYNPRTYAV------VYETVTPYNTAQKVREVQYA 114
Query: 125 VFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQ 184
FV D P LL D F P LG S +++S
Sbjct: 115 HTKYRMYFVQGDTPVQRLLCSADFTNWQFAAFTFGVNPNDELG--------STPNVALSP 166
Query: 185 ADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRS 244
+ T ++ S P W+ Y G ++ K +R+
Sbjct: 167 SGTEVGKVIS--------------LTASSFPNWSNTETYLTGDRVIHSGKTWRATI---- 208
Query: 245 GDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISV 304
D G AT + W V N ++ S G++ + G +++ V
Sbjct: 209 -DNKGVEPTATTSE-----WEEVTNEAANVFTPSNVGSIIE--INGGQVKITQYVDPSRV 260
Query: 305 APQSQTLFQAGVSVV--SWFMS--AWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSF 360
+ + V + SW + A+ GYP V F RL+F+ +K ++ S
Sbjct: 261 NGEVLVKLTSAVQAIAKSWVLKSIAFSATAGYPKAVCFFKQRLVFANTKTSPNQMWFSRI 320
Query: 361 GAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSK 420
G +F A + A + + I + G V + + S
Sbjct: 321 GDDGNF-----LETTQDADAFSIASSSAQSDNILHLSQRGGVVALTGGAEFLINSQGPLT 375
Query: 421 GLSIDFRRVSGSGV-YACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLADH 478
S + GV P VG+ L+FV G R++ +S E G E++Q+A H
Sbjct: 376 PASAQIDEHTSYGVQANVKPCRVGNELLFVQRGGERLRAMSYRYEVDGLISPELSQIAPH 435
Query: 479 LFNQ--RILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHY 536
+ I +L +Q+ P+SIVW+V+ S L + AW H +
Sbjct: 436 IPENHAGIKELTFQQTPNSIVWIVMGDGAVSSITL------NRDQEMNAWSQHDFGGQ-- 487
Query: 537 VLSAASFPNDNRGGTSLWMLVALSA 561
VLS + P G +ML +
Sbjct: 488 VLSICALP-TGLGEDQCFMLTIRNG 511
>gi|332160974|ref|YP_004297551.1| hypothetical protein YE105_C1352 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665204|gb|ADZ41848.1| Hypothetical phage protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862130|emb|CBX72294.1| hypothetical protein YEW_AK02310 [Yersinia enterocolitica W22703]
Length = 657
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 105/581 (18%), Positives = 210/581 (36%), Gaps = 105/581 (18%)
Query: 3 NTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRL 62
K +F+AGE+SPRL+ R D++ +A G N + + +G ++ P + +
Sbjct: 2 RANLIKTNFTAGEISPRLM-GRVDIARYANGAKTVENAVCVIHGGVMRRPGSRFAAKAKF 60
Query: 63 DPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLE 122
+ R+ + +L FG+ ++ + +PYT SL
Sbjct: 61 GDQKARLIPYVFNRSQAYVLEFGNGYVRFYQN--GAQIGAGSTPYEIASPYTSAMLSSLN 118
Query: 123 YAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSI 182
Y T VH+D PP+ L D + P P+
Sbjct: 119 YVQGADTMFLVHQDVPPYRLQRKGQTDWV--------LEPAPF----------------- 153
Query: 183 SQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTG 242
I KP D+ R P +W K S+ ++ + +L+
Sbjct: 154 ---------------IVKPFDEIRDT-----PEKWCKP---SVKEFV--GSAITLTLSDA 188
Query: 243 RSGDRFGYSKGATYVKDNNITWI----TVLNLSSKTSRESASGAVAPYYVWGDIKDVSKD 298
SG G GA +V + +++ ++++ + TS A+G +
Sbjct: 189 ESG---GALTGAGWVGADVGSYVRINSGLVHIQAVTSAAVATGVI--------------- 230
Query: 299 GRSISVAPQSQTLFQAGVSVVSWFM--SAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVY 356
R++ A QS S +W + W + GYP T + RL+ +GS +++
Sbjct: 231 -RTVLSAVQSS-------SPGAWTREDAVWSAEFGYPGAATLYQQRLVLAGSPKYPQTIW 282
Query: 357 LSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSI 416
+S G + F L D A++ V+ + I + + + +
Sbjct: 283 MSETGIYLSFELGT-----DDDDAISFTVSSDQINPIVHLAQMNTLIALTSTGEFTITGG 337
Query: 417 SLS--KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTEQ--GFRFNEI 472
S +I + S G + PV VG ++F+ R++ ++ + + N++
Sbjct: 338 GESAITPTNISVKNPSPYGCNSIKPVRVGTEIMFMQRANRKLFAVAYDPDSFVAYSANDL 397
Query: 473 TQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMIS 532
+ L++H+ + + YQ+EP + +W+ + +L + AW + +
Sbjct: 398 SVLSEHITLSGAVDMAYQQEPDAFIWMTR-----ADGQLAVATIDR-AQDVIAWSRQVTT 451
Query: 533 DKHYVLSAASFPNDNRGGTSLWMLVAL-SAGEERSFTVRLN 572
+ S + P +++LV G+ + +
Sbjct: 452 GAY--ESVVTIPAST--NDVVYVLVKRVINGQIVRYVEVFD 488
>gi|295096862|emb|CBK85952.1| hypothetical protein ENC_24250 [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 662
Score = 379 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 102/577 (17%), Positives = 197/577 (34%), Gaps = 92/577 (15%)
Query: 3 NTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRL 62
K +F+AGE+SPRL+ R D++ +A G N + + G +V P + +
Sbjct: 2 RANLIKTNFTAGEVSPRLM-GRVDIARYANGAKIIENAVVVVQGGVVRRPGTRFAAATKH 60
Query: 63 DPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLE 122
+ +R+ + +L FGD ++I +PYT ++
Sbjct: 61 GDKKSRLIPYVFNRSQAYMLEFGDGYMRIFQNGKQLVNED-NTPYEIASPYTADMLPAVN 119
Query: 123 YAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSI 182
Y T VH+ PH L D + P P+
Sbjct: 120 YVQGADTMFLVHQSVKPHRLQRRGQTDWV--------LEPAPF----------------- 154
Query: 183 SQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTG 242
I +P D+ R P +W K S+ ++ ++ +T
Sbjct: 155 ---------------IVEPFDEVRDT-----PQKWCKP---SVKEFVGSE------ITLT 185
Query: 243 RSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSI 302
S G ++ + W + + G V + +
Sbjct: 186 LSDADPGDNETPPFTGAG---W---VAQDVGSYVRINEGLVLIKSIT--------SAQVA 231
Query: 303 SVAPQSQTLFQAGVSVVSWFM--SAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSF 360
+S S SW S W + GYP VT + RL+ +GS +++ S
Sbjct: 232 VGTIRSDLSATQAASPGSWTREDSVWTNEFGYPGAVTLYQQRLVLAGSPKYPQTIWWSET 291
Query: 361 GAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLS- 419
G + F + E A++ ++ + I + + + + S + +
Sbjct: 292 GVYLSFEIGTE-----DDDAISFTLSSDQLNPIVHLAQMNTLIALTYGGEFTITSGNDAA 346
Query: 420 -KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTEQ--GFRFNEITQLA 476
+I + S G PV VG ++FV GR++ ++ + + N++T LA
Sbjct: 347 ITPTNISVKNPSPYGCNGIRPVRVGTEIMFVQRAGRKLYAVAYDPDSFVSYSANDMTVLA 406
Query: 477 DHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHY 536
+H+ +L + YQ++P + +W+V + + AW + +
Sbjct: 407 EHITAGGVLDMAYQQQPDAFIWMVRADG------VAVTMAIDRAQDVIAWSRQVTAGAF- 459
Query: 537 VLSAASFPNDNRGGTSLWMLVALS-AGEERSFTVRLN 572
S A+ P+D ++ +V G+ + +
Sbjct: 460 -ESVATIPSDT--DDVVYAIVRREINGQTVRYVEVFD 493
>gi|303327644|ref|ZP_07358084.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
gi|302862005|gb|EFL84939.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
Length = 681
Score = 376 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 119/588 (20%), Positives = 207/588 (35%), Gaps = 122/588 (20%)
Query: 10 SFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNRV 69
+F+ GE++P L +R DL +A + N +P +G P + +
Sbjct: 7 NFTGGEVTPTL-SARYDLGRYANSLKIMENFLPNLHGDAYRRPGTYFLENL---GEGCVL 62
Query: 70 FSFSIPD--GGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVFG 127
FS G L FG+K L+IV V ++PY D + YA G
Sbjct: 63 LPFSFNAEAGQNFALAFGEKSLRIVNVNGYVVAEA------MESPYALADVPEISYAQVG 116
Query: 128 STAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLP---------PPWLGDG-------MI 171
HKD+ H ++ +++ + W G G +
Sbjct: 117 DVVYLAHKDYALHKVVRTGSAPAYAWSIGTVALNTSLAAPAAPTAAWQGGGGSYTLRYKV 176
Query: 172 SGVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIV- 230
S V ++ K S+ A STA G +P +W + + + V
Sbjct: 177 SAVDADGKESLPSAVGSTAS-------------------GKYPTDWTEGNHCVLSWQAVE 217
Query: 231 --ADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYV 288
A+ +YR + G G G ++G ++ N A A P
Sbjct: 218 GAAEYNIYRE-SAGYYG-FIGIAQGTSFDDQNY----------------EADIADTPKED 259
Query: 289 WGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGS 348
W D + P VTFH R++ +G+
Sbjct: 260 WDPFADGNN-----------------------------------PGTVTFHQQRMVLAGT 284
Query: 349 KGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCD 408
+ S Y+S G F +F DP + + + I W FG+ +L+G
Sbjct: 285 RNSPQSFYMSRTGDFENFRKSRPLQDDDP---VEYQLASGTVDGIVWAASFGD-LLLGTA 340
Query: 409 TSLWLLSISLS--KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-Q 465
++ + + + S G P+ +G+ ++ G R++ + S E
Sbjct: 341 SAEYKATGDNGAITAKNCTITAQSYWGSAKIAPIIIGNSVMHCQRHGSRVRDLYYSLEKD 400
Query: 466 GFRFNEITQLADHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDF 524
G+ N+++ LA HLF+ I Q +Q+ P S++W+V + LL + E + +
Sbjct: 401 GYAGNDLSVLAPHLFDGHTIRQWAFQQTPGSVLWLVRDDG-----VLLALTYMKE-QDIW 454
Query: 525 AWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVALS-AGEERSFTVRL 571
W + + V S A+ +N L ++V S G + + RL
Sbjct: 455 GWSRQITDGR--VRSVAALSGENA--DELLLVVERSVDGARKYYLERL 498
>gi|85059168|ref|YP_454870.1| hypothetical protein SG1190 [Sodalis glossinidius str. 'morsitans']
gi|84779688|dbj|BAE74465.1| hypothetical phage protein [Sodalis glossinidius str. 'morsitans']
Length = 662
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 100/577 (17%), Positives = 188/577 (32%), Gaps = 92/577 (15%)
Query: 3 NTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRL 62
K +F+AGE+SPRL+ R D+ +A G +N + + G ++ P + +
Sbjct: 2 RANLIKTNFTAGEVSPRLM-GRVDIMRYANGAKAIQNGVVVVQGGVMRRPGTRFAAAAKY 60
Query: 63 DPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLE 122
R R+ + +L FGD L++ + + +PY+ S+
Sbjct: 61 SDRPARLIPYVFNRSQAYVLEFGDGYLRVY-QKGKPVVNANNTPYEIASPYSADRLPSVN 119
Query: 123 YAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSI 182
Y T VH P+ L D + P P+
Sbjct: 120 YVQGADTMFLVHPAVKPYRLQRRGQTDWV--------LEPAPF----------------- 154
Query: 183 SQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTG 242
I +P D+ R P +W +
Sbjct: 155 ---------------IVEPFDEIRET-----PKKWCR----------------------- 171
Query: 243 RSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSI 302
S F S+ + D + + GA + +
Sbjct: 172 PSAKEFVGSEVTLTLSDADPGENRNPPFTGAGWVAQDVGAYVRINGGLVLIQRIDSAQVA 231
Query: 303 SVAPQSQTLFQAGVSVVSWFM--SAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSF 360
+S + S SW S W + GYP VT + RL+ +GS +++ S
Sbjct: 232 VGTLRSDLNAKQAASPGSWTREESVWTDNLGYPGAVTLYQQRLVLAGSPKYPQTIWWSET 291
Query: 361 GAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLS- 419
GA+ F L + A++ ++ + I + + + + S + +
Sbjct: 292 GAYLSFELGTK-----DDAAISFTLSSDQLNPIVHLAQMNTLIALTYGGEFTITSGNDAA 346
Query: 420 -KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTEQ--GFRFNEITQLA 476
+I + S G P+ VG ++F+ GR++ ++ + + N++T LA
Sbjct: 347 ITPTNISVKNPSPYGCNRIRPLRVGTEILFIQRAGRKLYAVAYDPDSFVSYAANDLTVLA 406
Query: 477 DHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHY 536
+H+ + + YQ++P ++W+V E + + AW M
Sbjct: 407 EHITAGGVRDMAYQQQPDGLIWLVREDGVAVTVTM------DRAQDVVAWSRQMTEGAF- 459
Query: 537 VLSAASFPNDNRGGTSLWMLVAL-SAGEERSFTVRLN 572
S S P++ L+ LV G + +
Sbjct: 460 -ESVTSIPSER--DDVLYALVRRHINGHTVRYVEVFD 493
>gi|220918520|ref|YP_002493824.1| hypothetical protein A2cp1_3428 [Anaeromyxobacter dehalogenans
2CP-1]
gi|219956374|gb|ACL66758.1| hypothetical protein A2cp1_3428 [Anaeromyxobacter dehalogenans
2CP-1]
Length = 825
Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats.
Identities = 131/635 (20%), Positives = 217/635 (34%), Gaps = 101/635 (15%)
Query: 8 KHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLD---- 63
+ SF+AGEL PRL R DL+ + G+ ++RN G ++ P R+ +
Sbjct: 8 QGSFAAGELGPRLH-GRHDLAKYQVGLRRARNFFLSPEGAALNRPGTPFVREAKDSAAGV 66
Query: 64 PRSNRVFSFSIPD--GGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYK--TPYTFKDNK 119
R R+ F + G L FG ++ V +T P + Y+ TPY D
Sbjct: 67 DRGARLIPFIFSEDLGQAYELEFGQGYVRFHV-GGATIADPLNSAQPYELATPYLAADLP 125
Query: 120 SLEYAVFGSTAVFVHKDHPPHHLLY--IQDGDKISFTFDEIKFLPPPWLGDGMISGVKSN 177
L+YA G K + P L + + +FD +LG + V ++
Sbjct: 126 RLKYAQQGDVVTLTCKGYDPRELRRLAHDSWELVPLSFDVPAPNGVVYLGVEALENV-AD 184
Query: 178 AKLSISQADTSTARITSDMKIFK---PLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDK 234
A Q I D + + R I +G W Y +GA + +
Sbjct: 185 ATHPARQWAWQVTEIWEDESGLQWETSPLRVRKIAVGAGAT-WHTGFTYPLGACVSYAGQ 243
Query: 235 VYRSLTTGRSGDRF-----GYSKGATYVKDNNITWI-------------TVLNLSSKTSR 276
++S+ G G ATY + + V+ +T +
Sbjct: 244 FWQSVIADNRGHVPEAVMVGDPPAATYPYWTPVGAVPDPFAVYESNAPTDVVLFPDRTIK 303
Query: 277 ESASGA-----------------------------VAPYYVWGDIKDVSKDGRSISVAPQ 307
ASGA VA + GD D+S PQ
Sbjct: 304 LWASGAWTGVDGSRLVGRRVYRGRGTVFGYVGEFEVAEFRDTGDTPDLSYS------PPQ 357
Query: 308 SQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFS 367
+ F PS VTFH R G+ +LS G +Y+F
Sbjct: 358 GRNPFTVFGPAGEVVRLE------QPSVVTFHAERRSLLGTAQRPAHAFLSRTGDYYNFD 411
Query: 368 LDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLL---SISLSKGLSI 424
D A + + W +L+G + +W + S +
Sbjct: 412 RHTPALVDD---AFELELAGRLREEVRWAV-GAAALLIGTQSGVWAIRPPSGEVLGPGKA 467
Query: 425 DFRRVSGSGVYACPPV----SVGDCLVFVCGVGRRIKYISG-STEQGFRFNEITQLADHL 479
S +G P+ +VGD +++V G ++ + QGF ++++ LA HL
Sbjct: 468 TAVPQSSAGSSYLDPLVVPSAVGDAVLYVRTKGSGVRDLVYDDGRQGFVGSDLSLLAKHL 527
Query: 480 FNQ-RILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVL 538
F I +QE+P S+ W+V S +LL + + + +AW H V
Sbjct: 528 FTGYSIKAWTFQEDPWSVAWLVR-----SDGKLLSLTYVRD-QEVWAWAWHDTQG--IVE 579
Query: 539 SAASFPNDNRGGTSLWMLVAL--SAGEERSFTVRL 571
+ P +++++V G + R+
Sbjct: 580 DVCAIP--EGTEDAVYLIVKRQIGDGTWHRYVERM 612
>gi|220903983|ref|YP_002479295.1| hypothetical protein Ddes_0709 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868282|gb|ACL48617.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 689
Score = 356 bits (913), Expect = 6e-96, Method: Composition-based stats.
Identities = 122/584 (20%), Positives = 206/584 (35%), Gaps = 103/584 (17%)
Query: 9 HSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNR 68
++F+ GE++P L +R DL+ + ++ N++P +G P + + +
Sbjct: 8 NNFTGGEIAPTL-SARYDLARYRNCLSCMENMLPGLHGDTARRPGTRFVANL---DGHSV 63
Query: 69 VFSFSIP--DGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVF 126
+ FS +LVFG L I + +TPY + + + YA
Sbjct: 64 LIPFSFNALTSQNFVLVFGSHCLHIAGEQG------LENIPVIETPYAPGELQDISYAQV 117
Query: 127 GSTAVFVHKDHPPHHLLYIQDGDKIS--------FTFDEIKFLP---PPWLGDGMISGVK 175
G T H +HP H ++ + + ++ +++ P L SG
Sbjct: 118 GDTVYLAHSNHPLHKVVRRDAPENRTQFEEAAYAWSLEKVALNASLAAPELPSVTFSGSA 177
Query: 176 SNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIV---AD 232
+ L A A S GR HP +W + + +I V +
Sbjct: 178 GSYTLRYKVAAVDAAGRESLPSPAGQCANGR------HPSDWVQGNSAAISWAAVEGAVE 231
Query: 233 DKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDI 292
+YR G G G S G + N A A P W
Sbjct: 232 YNIYRE-EAGYFG-FIGVSGGLNFNDQNY----------------QADTADTPKEDWDPF 273
Query: 293 KDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDE 352
D + YP V FH R++ + + +
Sbjct: 274 ADGN-----------------------------------YPGIVAFHQQRMVLAATPKNP 298
Query: 353 LSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLW 412
+ Y+S G F +F DP + L + S + W FG+ +L+G S +
Sbjct: 299 QAFYMSRVGDFENFRKSRPLQDDDPVEYL---IASGSIDAVTWAASFGD-LLIGTSGSEY 354
Query: 413 LLSISLS---KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFR 468
S +I S G P+ +G+ ++ V G R++ + S E G+
Sbjct: 355 KASGGDGASITAGNISITAQSYWGSAGLAPIIIGNSILHVQRHGSRVRDLFYSLEKDGYA 414
Query: 469 FNEITQLADHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWH 527
N+++ +A HLF ILQ YQ+ P S +W V + LL + E + + W
Sbjct: 415 GNDLSIMAPHLFEGHTILQWAYQQTPGSTIWCVRDDG-----LLLAFTYMKEHD-IWGWS 468
Query: 528 THMISDKHYVLSAASFPNDNRGGTSLWMLVALSAGEERSFTVRL 571
+ + VLSAA+ +G T + + G+ R F RL
Sbjct: 469 RQITQGR--VLSAAAISG-EKGDTLMLVTERRIDGQPRIFLERL 509
>gi|167032763|ref|YP_001667994.1| hypothetical protein PputGB1_1755 [Pseudomonas putida GB-1]
gi|166859251|gb|ABY97658.1| conserved hypothetical protein [Pseudomonas putida GB-1]
Length = 774
Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats.
Identities = 97/574 (16%), Positives = 194/574 (33%), Gaps = 79/574 (13%)
Query: 4 TTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLD 63
T + SFSAGE++P +R DL+ + + RN + L G + + + +
Sbjct: 2 TEVIQPSFSAGEVAPATY-ARVDLARYYTALKTCRNFVVLPEGGAQNRSGTRFITEVKDS 60
Query: 64 PRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEY 123
R+ F +L FG+ ++ + + + +PYT L++
Sbjct: 61 AARTRLIPFQFSTEQTYILEFGNLYIRFISMGGQVVS--GVTPYEIASPYTTAQLPDLKF 118
Query: 124 AVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSIS 183
VH DHPP L + ++T I F P G+++ ++ +
Sbjct: 119 TQSADVMTIVHPDHPPRELSRLAP---TNWTLTAITFEPGIAAPTGLVATARTGGSGDTT 175
Query: 184 QADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGR 243
+ ++T+ I WA NT
Sbjct: 176 EYQ---YKVTAVSSI-----------SEGSVESWASNTATV------------------- 202
Query: 244 SGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSIS 303
+ F GAT +K+S + + DI ++
Sbjct: 203 --NSFDDKPGATLAWTAVAGADHYNVYKNKSSGVFGFIGQSAGVTFNDINITPATDNTV- 259
Query: 304 VAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAF 363
P F G + PS V ++ R+ F+ S+ + +V++S G F
Sbjct: 260 --PIGYNPFADGNN---------------PSVVGYYQQRMAFAASRANPQTVWMSRTGDF 302
Query: 364 YDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLS---K 420
++F D + + + I + E + + + ++ S
Sbjct: 303 HNFGYSDPNKDDDG---IEFVIASRQVNQIRHLVSLRELLAM-TSGAEIAITGSSDSGIT 358
Query: 421 GLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGST-EQGFRFNEITQLADHL 479
++ S G P + +++ G ++ ++ + GF+ +++ L+ HL
Sbjct: 359 PANVSAVEQSYFGSSDVIPAIYANTALYIQARGGKLSTLAYNYVSDGFQPQDVSVLSSHL 418
Query: 480 FNQ-RILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVL 538
I + P+ ++W+V LLG F + + + W H V
Sbjct: 419 LRGFTIQDQAFALAPNGVLWLVRNDG-----MLLGFTFLPD-QQVYGWSWHDTDGA--VE 470
Query: 539 SAASFPNDNRGGTSLWMLVALS-AGEERSFTVRL 571
+ AS P D+ +L+M+V + G + + R+
Sbjct: 471 AVASVPEDD--EDALYMIVRRTINGVTKRYIERM 502
>gi|212703338|ref|ZP_03311466.1| hypothetical protein DESPIG_01381 [Desulfovibrio piger ATCC 29098]
gi|212673248|gb|EEB33731.1| hypothetical protein DESPIG_01381 [Desulfovibrio piger ATCC 29098]
Length = 703
Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats.
Identities = 126/591 (21%), Positives = 201/591 (34%), Gaps = 103/591 (17%)
Query: 9 HSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNR 68
H+F+ GE+SP +L +R DLS + V N++P +G + P
Sbjct: 6 HNFTGGEVSP-ILAARYDLSRYGSSVQCMENMLPGLHGDVRRRPGTLFLGSLE---GEAV 61
Query: 69 VFSFSIPD--GGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVF 126
+ FS +LV L I + + + AL TPY + + A
Sbjct: 62 LLPFSFNALAEQNFVLVLSGHSLCIADIHGFDRQTGALPRLP--TPYEARHLLEICAAQV 119
Query: 127 GSTAVFVHKDHPPHHLLYIQDGD-------------KISFTFDEIKFL---PPPWL-GDG 169
G T H +P H L+ D +T + + P P
Sbjct: 120 GDTVYLAHTAYPLHKLVRSTYSDPEAPLPDNAIRSHGYRWTLEAVALNSSLPAPQAPDCT 179
Query: 170 MISGVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYI 229
+ G + + ++ K + G G HP +W I
Sbjct: 180 FVRGNNDDDAGLGYTLRYKIVAVDANGKQSLASEAGSC--DGKHPSDWVVGNRTDISWTA 237
Query: 230 V---ADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPY 286
V + +YR G G G S G T+ +N A A P
Sbjct: 238 VEGATEYNIYRE-EAGYYG-FIGVSSGTTFSDNNY----------------QADTADTPR 279
Query: 287 YVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFS 346
W D + PS V FH R++ +
Sbjct: 280 EDWDPFADGNN-----------------------------------PSVVAFHQQRMVLA 304
Query: 347 GSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVG 406
G++ + YLS G F +F DP + L + S I W FG+ +L+G
Sbjct: 305 GTRDSPQAFYLSRSGDFENFRKSRPLQDDDPVEYL---IASGSIDAIAWAASFGD-LLLG 360
Query: 407 CDTSLWLLSISLS--KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE 464
S + S + S +I S G P+ +G+ ++ V G ++ + S E
Sbjct: 361 TSGSEYKASGNGSAITPGNITITAQSYWGSAGLAPIIIGNAILHVQRHGAHVRDLFYSLE 420
Query: 465 -QGFRFNEITQLADHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEG 522
G+ N+++ LA HLF R+ Q YQ+ P S++W+V + LL + E +
Sbjct: 421 KDGYAGNDLSILAPHLFEGHRLRQWAYQQTPGSVLWIVRDDG-----LLLALTYLKEHD- 474
Query: 523 DFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVAL--SAGEERSFTVRL 571
+ W H + VLS S + L ++V + G R RL
Sbjct: 475 IWGWSRHPTAG--EVLSVCSISGPD--SDELLLVVRRRDADGGSRYCLERL 521
>gi|41179374|ref|NP_958682.1| Bbp13 [Bordetella phage BPP-1]
gi|45569506|ref|NP_996575.1| hypothetical protein BMP-1p12 [Bordetella phage BMP-1]
gi|45580757|ref|NP_996623.1| hypothetical protein BIP-1p12 [Bordetella phage BIP-1]
gi|40950113|gb|AAR97679.1| Bbp13 [Bordetella phage BPP-1]
Length = 681
Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats.
Identities = 100/577 (17%), Positives = 185/577 (32%), Gaps = 81/577 (14%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M N + SF GE+SP + R D + G+A RN + GP + R+
Sbjct: 1 MSNVRVLQRSFGGGEISPE-MFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREV 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
+ + R+ F+ ++ G + + PY D +
Sbjct: 60 KDSAKKVRLIPFTYSVTQTMVIELGAGYFRFHTNGGTLL--DGAVPYEIANPYAEADLFN 117
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL 180
+ Y VH ++ P L + ++ I F P V + +
Sbjct: 118 IHYVQSADVLTLVHPNYAPRELRRLG---ATNWQLATIAFTSP----------VATPTSV 164
Query: 181 SISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLT 240
+ + + T D YR +
Sbjct: 165 TATSNNKGT-------------------------------------------DYTYRYVV 181
Query: 241 TGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKD-G 299
T + S T N + T SAS + Y V+ + + G
Sbjct: 182 TALDAEGKTES---APSSAGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYGYIG 238
Query: 300 RSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSS 359
++ + + + + + YP+ V++ R F+G+ +++++
Sbjct: 239 QTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTR 298
Query: 360 FGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLS 419
G S D V A+ I + P E +L+ + S++
Sbjct: 299 SGTESAMSYSLPVRDDDRVA---FRVAAREANAIRHIVPLTELLLLTSSGEWRVASVNSD 355
Query: 420 --KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLA 476
+I R S G PV V + ++ G ++ ++ + + GF +++ A
Sbjct: 356 AVTPTTISVRPQSYVGATDVQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLRA 415
Query: 477 DHLFNQ-RILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKH 535
HLF+ IL + Y + P IVW + +S +LLG + E + AWH H
Sbjct: 416 AHLFDNLDILDMAYAKAPQPIVWFI-----SSSGKLLGLTYVPE-QQIGAWHQHDTDG-- 467
Query: 536 YVLSAASFPNDNRGGTSLWMLVALS-AGEERSFTVRL 571
S A L+ +V + G E + R+
Sbjct: 468 VFESCAVV--AEGNEDRLYAVVRRTIGGNEVRYVERM 502
>gi|303257570|ref|ZP_07343582.1| conserved hypothetical protein [Burkholderiales bacterium 1_1_47]
gi|302859540|gb|EFL82619.1| conserved hypothetical protein [Burkholderiales bacterium 1_1_47]
Length = 687
Score = 308 bits (788), Expect = 2e-81, Method: Composition-based stats.
Identities = 99/590 (16%), Positives = 179/590 (30%), Gaps = 89/590 (15%)
Query: 4 TTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLD 63
T + SF+ GE+SP + R D + + G+ N + GP+ + P + R+ +
Sbjct: 5 TKVLQRSFAGGEISPE-MFGRTDDTKYQTGLETCLNFLCRPQGPIENRPGFEFVREVKDS 63
Query: 64 PRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEY 123
+ R+ F ++ G K + TP+ D LEY
Sbjct: 64 SKKVRLIPFIFNAQQTFVIELGHKYARFH--SFGATLMNGNQPYEITTPWDEDDLFELEY 121
Query: 124 AVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKF-----LPPPWLGDGMISGVKSNA 178
H+D+ P + + D + I F P + +
Sbjct: 122 VQSNDIITVTHEDYAPTEIRRYSNTD---WRLATISFSSTLATPTNVTAVRETTTGNEDK 178
Query: 179 KLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRS 238
+ + +D I S + C +A T I V+ YR
Sbjct: 179 NADKYTFQYKVSCLNADKTIESEP----SAAVSCTANLYATGTTIKISCSAVSGASYYRF 234
Query: 239 LTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKD 298
Y I G + I D
Sbjct: 235 -----------------YKNQGGI-----------------YGYLGDSETTSIIDDNIAP 260
Query: 299 GRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLS 358
I+ + YPS V + R F+G K D V +
Sbjct: 261 KTDITPRRYDSVVSSGN----------------YPSAVGYFEQRRWFAGFKTDPQRVVAT 304
Query: 359 SFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISL 418
G D + D + + + I + P +L+ + + + +
Sbjct: 305 RSGTESDMTYSLPSKDDDR---INFRIAATEFNKILHISPLSHLILLTTGSEIRISPQNS 361
Query: 419 S--KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTEQ-GFRFNEITQL 475
SI R S +G P+ + L+F ++ ++ + GF ++
Sbjct: 362 DAITPSSISARPQSYNGATTVRPLVYNNNLIFASARDGHVRELAYQYQAGGFVSGDLCLR 421
Query: 476 ADHLFN-QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDK 534
+ HLF+ + I Q+ P+ I+W V +S LLG + E + +WH H
Sbjct: 422 SQHLFDFKTIKDATAQKAPYPIMWFV-----SSDGNLLGLTYIPE-QQVGSWHRHNTDG- 474
Query: 535 HYVLSAASFPNDNRGGTSLWMLVALS-AGEERSFTVRL------NLLDDF 577
S + +L+ ++ + G ++ + R+ NL D F
Sbjct: 475 -VFESCCAV--SEGVEDALYCVIRRTINGSQKRYVERMRTRNFKNLADAF 521
>gi|187476936|ref|YP_784960.1| phage protein [Bordetella avium 197N]
gi|115421522|emb|CAJ48031.1| phage protein [Bordetella avium 197N]
Length = 681
Score = 307 bits (785), Expect = 5e-81, Method: Composition-based stats.
Identities = 97/577 (16%), Positives = 182/577 (31%), Gaps = 81/577 (14%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M N + SF GE+SP + R D + G+A RN + GP+ + R+
Sbjct: 1 MSNVRVLQRSFGGGEISPE-MFGRIDDVKYQSGLAICRNFVVKPQGPVENRAGFSFVREV 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
+ + R+ F+ ++ G + + PYT D S
Sbjct: 60 KDSTKKVRLIPFTYSVTQTMVIELGAGYFRFHTDGGTLL--NGDTPYEIANPYTEADLFS 117
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAK- 179
+ Y VH ++ P L I D + I F+ + G+ + +
Sbjct: 118 IHYVQSADVLTLVHPNYAPRELRRIGATD---WQLATIAFMSSVAMPTGVTATSNNKGTD 174
Query: 180 LSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSL 239
+ T+
Sbjct: 175 YTYRYVVTALDAEGKTESAPS--------------------------------------- 195
Query: 240 TTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDG 299
+ G + + GA + + + + + G + + D
Sbjct: 196 SAGICANNLFTNGGANTIAWSAAS--GASRYNVYKEQGGLYGYIGQTTGTSLVDDNIAPD 253
Query: 300 RSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSS 359
S++ P +F A YP+ V++ R F+G+ +++++
Sbjct: 254 LSVT-PPIYDAVFNAAGD--------------YPAAVSYFEQRRCFAGTINKPQNIWMTR 298
Query: 360 FGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLS 419
G S D V A+ I + P E +L+ + S++
Sbjct: 299 SGTESAMSYSLPVRSDDRVA---FRVAAREANAIRHIVPLTELLLLTSSGEWRVASVNSD 355
Query: 420 --KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLA 476
+I R S G PV V + ++ G ++ ++ + + GF +++
Sbjct: 356 AVTPTTISVRPQSYVGATDVQPVVVNNTAIYGAARGGHVRELAYNWQANGFVTGDLSLRC 415
Query: 477 DHLFNQ-RILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKH 535
HLF+ IL + Y + P IVW + +S +LLG + E + AWH H
Sbjct: 416 AHLFDNLNILDMAYAKAPQPIVWFI-----SSSGKLLGLTYVPE-QQIGAWHQHDTEG-- 467
Query: 536 YVLSAASFPNDNRGGTSLWMLVAL-SAGEERSFTVRL 571
S A L+++V G+E + R+
Sbjct: 468 VFESCAVV--AEGNEDRLYVVVRRIIGGKEVRYIERM 502
>gi|119386474|ref|YP_917529.1| hypothetical protein Pden_3767 [Paracoccus denitrificans PD1222]
gi|119377069|gb|ABL71833.1| conserved hypothetical protein [Paracoccus denitrificans PD1222]
Length = 679
Score = 298 bits (763), Expect = 2e-78, Method: Composition-based stats.
Identities = 96/573 (16%), Positives = 187/573 (32%), Gaps = 79/573 (13%)
Query: 4 TTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLD 63
+ +F++G L P L R DL+ + + K RN+ +G + + P ++ +
Sbjct: 3 AARIQPTFASGVLGPAL-WGRIDLARYDSALRKGRNVFVHAHGGVSNRPGLRFVCEVMDS 61
Query: 64 PRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEY 123
+R+ F ++L+ G ++ V + + + T TP+T ++L+
Sbjct: 62 AHRHRLLPFVREADDASILIMGQNEMGFVKNGARLQSGGVDY--TIATPWTATQAQALDA 119
Query: 124 AVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSIS 183
H+ P ++ + D T + P +
Sbjct: 120 VQSVDVIFAAHRQVAPRRIMRNGETDWSIATVPINPTVAAPTISSVTPRNSGDETYRYRV 179
Query: 184 QADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGR 243
A + + + SI + ++ T + + +VYR
Sbjct: 180 TAVVGGVESFASAPLATTAAELLSIEGAWNDIAFSAVTGAT-------EYRVYRMRNGVP 232
Query: 244 SGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSIS 303
G++ G ++ DN +
Sbjct: 233 GY--IGFTTGTSFRDDN-------------------------------------ISPDST 253
Query: 304 VAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAF 363
V P Q S + YPS V+ + RL F S +V+LS G +
Sbjct: 254 VTPPVQA-------------SLFDAAGKYPSVVSIYQQRLAFGASDAQPETVWLSRVGDY 300
Query: 364 YDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLS-KGL 422
+F+ D + + + I M E ++ + L
Sbjct: 301 LNFTRSQNMTSSDRAEFD---MAGEQLNRIRAMLQLRELLVFTSAGEFSVSGPDGGFDAL 357
Query: 423 SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLADHLFN 481
+ + G P+ D ++FV GR ++ + + E G+ N++ A H
Sbjct: 358 NPIVTQHGYIGSATVKPLVADDTVLFVDRSGRGVRDLRYAYESDGYSGNDLAIFASHFLQ 417
Query: 482 -QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSA 540
+RI+ + P SI+WVVL+ +LL + E + +AW I V S
Sbjct: 418 GRRIVGWAMAKNPWSIIWVVLD-----NGKLLALTYKREHQ-VWAWTEMDIDGA--VESV 469
Query: 541 ASFPNDNRGGTSLWMLVAL-SAGEERSFTVRLN 572
A P + +++V G++R + R +
Sbjct: 470 ACIP--EGASDATYLIVRRLIDGQQRRYVERFD 500
>gi|118590938|ref|ZP_01548338.1| hypothetical protein SIAM614_19796 [Stappia aggregata IAM 12614]
gi|118436460|gb|EAV43101.1| hypothetical protein SIAM614_19796 [Stappia aggregata IAM 12614]
Length = 810
Score = 298 bits (762), Expect = 2e-78, Method: Composition-based stats.
Identities = 100/645 (15%), Positives = 202/645 (31%), Gaps = 101/645 (15%)
Query: 7 TKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRS 66
+ +FS GEL P L+ R DL L +A+ RN + L+ G L + + + R
Sbjct: 5 LQATFSRGELDPELIY-RSDLELFRSSLAECRNFLTLKRGGLRRRGGTKFIAELKDSSRQ 63
Query: 67 NRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVF 126
+ F +G Y +L FG ++ TPY+ L++
Sbjct: 64 GWLIPFEFGNGQYYMLEFGHHIFRVFTSEGRVG------TVEVATPYSSGVLPRLKFVQS 117
Query: 127 GSTAVFVHKDHPPHHLLYIQ------------DGDKISFTFDEIKFLPPPWLGDGMISGV 174
T P L + DG + P
Sbjct: 118 TDTLFIAGGGVAPQALKRLSELSWAIEPMSFRDGPYLDVNISPTNLKPAATGNAVPKMTS 177
Query: 175 KSNAKLSISQADT------------STARITSDMKIFKPLDKGRSIRLGCH--------- 213
+ ++S ++ ++S + S+ + +
Sbjct: 178 NTAPSGTVSASNGSASAWQLFNRSEGKTVLSSGATGWVQYQFPGSVVIDAYMLQAPNDNS 237
Query: 214 -----PPEWAKNTNYSIGAYIVAD---------DKVYRSLT----TGRSGDRFGYSKGAT 255
P +W + + + + D +R T + R +++G
Sbjct: 238 QNDDMPWQWNIEASNNGSDWTILDTQDGQDTWSSNEWREYDFHNETAFTHYRLSFTQGGG 297
Query: 256 YVKDNNITWITVLNLSSKTSRESASGAVAPYYV-----------------------WGDI 292
DN+ V + + A + W
Sbjct: 298 SASDNSAIGQLVFHRAGNDQSPFTLTASGTGGINGGAGFQPSDVGRHIRFRGSDGFWRWF 357
Query: 293 KDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDE 352
+ S+ + Q + W + AW G+P + +H NRL F+G+ +
Sbjct: 358 RIHSRQSATSVKVQLFGQALQDTKAQSIWRLGAWSGTTGWPETIGWHKNRLAFAGTSEEP 417
Query: 353 LSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLW 412
++ S F +FS+ D A+T + + I W+ + ++VG ++
Sbjct: 418 QKIWESQTEDFTNFSVSHVLKASD---AVTAGILSGQVNRIQWLVDDND-LIVGTTRAVR 473
Query: 413 LLSISLS----KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGST-EQGF 467
+ + ++D + + G P+ VG L++ G ++ ++ G
Sbjct: 474 AVGKATDQDPYGPENVDQKPETNFGANDVSPIKVGSVLIYYGPYGTDMREMAYDFGSDGR 533
Query: 468 RFNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWH 527
++++ HLF I YQ+ P S++W + + +G + + +
Sbjct: 534 VSQAVSEVQSHLFQSGIAGACYQQYPDSVIW-----QWDQKGSGIGFTYER-QQQVYGMQ 587
Query: 528 THMISDKHYVLSAASFPNDNRGGTSLWMLVALS-AGEERSFTVRL 571
H V A G ++WM+V + G+ R + +
Sbjct: 588 RHDFGG--VVECMADLSGA--GADTVWMIVKRTIDGQTRRYIEIM 628
>gi|167041089|gb|ABZ05850.1| hypothetical protein ALOHA_HF400048F7ctg1g17 [uncultured marine
microorganism HF4000_48F7]
Length = 999
Score = 289 bits (739), Expect = 8e-76, Method: Composition-based stats.
Identities = 111/707 (15%), Positives = 216/707 (30%), Gaps = 162/707 (22%)
Query: 3 NTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRL 62
+ SF+ G++SPR +Q +L + +A N++ L G L P +
Sbjct: 2 RIQALQSSFADGQISPR-MQGMVELESYKSSLATLENMVVLPQGSLTRRPGTFFAATTK- 59
Query: 63 DPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKT----------P 112
R+ FS G +L FG+ ++ + + T
Sbjct: 60 ANGQARLIPFSRGQGTSLVLEFGNLYIRFFANDGPVRTDDIAATYSQTTTTVTVTKSTHG 119
Query: 113 YTFKDNKSLEYA------------------------------------------------ 124
Y+ D L++
Sbjct: 120 YSASDEVYLDFTSGNGVDGFYTIATVADANTFTVTSTTSQTTSGNVNLSQRFEVTTTYTA 179
Query: 125 -VFGSTAVFVHKD-----HPPHHLLYIQDGDKISFTFDEIK--------FLPPPWLGDGM 170
A D HP H ++ S+ + P L DG
Sbjct: 180 SQVNDIAFTQSADVLFLVHPDHVPARLERNATNSWALTNLLPSLISGTYTRPTTVLTDGP 239
Query: 171 ISGVK-SNAKLSISQADTSTARITSDMKIFKPLDKGRS-----------IRLGCHP---- 214
+ ++ L+++ A S + + G L HP
Sbjct: 240 FKAMNTTDTTLTVALAANSDFTTSFSNGSLSLEEVGTVSPSNVDVATNAFTLANHPLVNG 299
Query: 215 ---------------PEWAKNTNYSIGA-------YIVADDKVYRSLTTGRSGDRFGYSK 252
P + T+Y + + + +T + +K
Sbjct: 300 QTVQFSSIPSGFASTPTLSATTDYFVVSATQNTFKLATSAGGTPVDITAAPTSADLTVNK 359
Query: 253 G---------ATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSIS 303
T I T + + +AP G + V + ++
Sbjct: 360 SFVDKDVYIKVTASATTGINDDTGFQTTDVGRYIRLNTEIAPQIKHGYGEIVERTSTTV- 418
Query: 304 VAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAF 363
V Q +T + W + ++ GYP V + RL+F+G+ + +++ S F
Sbjct: 419 VLVQLKTAIAGVGATTEWQLGSFSGTTGYPRTVQLYQQRLVFAGTAEESQTIFFSKTADF 478
Query: 364 YDFSLDGEYGCYD----------------PTKALTTAVTDFSASTIHWMHPFGEGVLVGC 407
++FS G A++ ++ + I W+ + + +G
Sbjct: 479 FNFSATEPLGQQTGQRDSSGRSIVGEQIFEDAAISLTISSDTVDQIEWISE-DQRLTIGT 537
Query: 408 DTSLWLLSISLSKGLSIDFR-RVSGSGVYACPPVS----VGDCLVFVCGVGRRIKYIS-G 461
++ L S F ++ +AC P + VG+ L++V GR+++ ++
Sbjct: 538 SGGIYQLYGSTDDLTLTPFNFSITKVSAWACDPTALPAKVGNNLLYVQNNGRKLRELAFD 597
Query: 462 STEQGFRFNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGE 521
+ + ++T ++ + ++ YQ++P+S++W + RL G + +
Sbjct: 598 KVQDQYSAADLTLRSEDISESGLIATAYQDQPYSVLWCLRNDG-----RLAGLTYV-DLL 651
Query: 522 GDFAWHTHMISDKHY---------VLSAASFPNDNRGGTSLWMLVAL 559
AWH H I HY V S AS P L+M+V
Sbjct: 652 QMRAWHRHTIGGAHYDDTHGSQAKVESIASIP--RGTHDQLYMIVKR 696
>gi|195541813|gb|ACF98016.1| hypothetical protein [uncultured bacterium 878]
Length = 926
Score = 288 bits (736), Expect = 2e-75, Method: Composition-based stats.
Identities = 90/518 (17%), Positives = 171/518 (33%), Gaps = 36/518 (6%)
Query: 72 FSIPDGGYALLVFGDKK-LQIVVVRSSTKWSPALFGKTYKTP--YTFKDNKSLEYAVFGS 128
F + + + D+ I S + + Y P Y D +++A
Sbjct: 144 FRVANRTASTFELNDQHGAPINGNGYSAFAAGGTAARVYTLPTTYQDADLAQMKFAQSAD 203
Query: 129 TAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQADTS 188
H ++ P L ++ +I F P+L V + S +
Sbjct: 204 ILYIAHTEYVPRKLQRYGP---TNWVLSQIDFQDGPYLPVNGAQTVLTP---SAASGAGI 257
Query: 189 TARITSDMKIFKPLDKGRS-IRLGCHPPEWAKNTNYSIGAYI-VADDKVYRSLTTGRSGD 246
T + + I + G +R+ W I + + + T R
Sbjct: 258 TISSATSVAITGAANNGAGAVRITSANHGWKTGDKIDITGIVGTTEANA--TWTVTRVNA 315
Query: 247 RFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAP 306
G+T+ ++ T + WG K ++ ++SV
Sbjct: 316 NTYDLNGSTFANAYASGGTAKPHIFESTDL-GRLIRIQHASTWGYAK-ITAYTSAVSVTA 373
Query: 307 QSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDF 366
+ F + +W + + + GYPS VTF+ RL + G V S + F
Sbjct: 374 DVLSNFGGTAASSAWRLGLYSQGGGYPSCVTFYEGRLFWGGCPLAPTRVDGSMSSNYETF 433
Query: 367 SLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISL----SKGL 422
S A+ + + + WM +G+LVG W++ +
Sbjct: 434 SPSSTASVVADDNAVAYPLDSGDVNNVLWMKDDEKGLLVGTKGGEWVVRANTLNGALTPT 493
Query: 423 SIDFRRVSGSGVY-ACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLADHLF 480
++ R + G Y PV G ++FV R+++ ++ + E GF ++T L+ H+
Sbjct: 494 NVKATRATTYGSYEGSQPVRTGKDIIFVQRKRRKVRNLNYTYEIDGFNAGDLTILSGHIG 553
Query: 481 NQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKH----- 535
QL +Q EP VW+ +L + + + W ++
Sbjct: 554 RLEFGQLAFQSEPEGWVWMTR-----GDGQLPVLTYDRDEQKI-GWSRQIMGGYQDAARR 607
Query: 536 ---YVLSAASFPNDNRGGTSLWMLVAL-SAGEERSFTV 569
V S S P+ N +W++V G+ +
Sbjct: 608 RPPIVRSVCSIPDPNDARDEVWLIVQRMIDGKTERYVE 645
Score = 95.7 bits (236), Expect = 2e-17, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 1/96 (1%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
MV + ++F AGE +P + + R DLS + N +P GP P
Sbjct: 1 MVRASPNFNAFDAGEFAP-ITEGRTDLSRYGFACRILENFMPRVVGPAARRPGTSFIAST 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRS 96
R + + F ++ FG+ ++
Sbjct: 60 RYPEKDALLVRFEYSTEQAYVMEFGNLYVRFYRNDG 95
>gi|323699364|ref|ZP_08111276.1| hypothetical protein DND132_1955 [Desulfovibrio sp. ND132]
gi|323459296|gb|EGB15161.1| hypothetical protein DND132_1955 [Desulfovibrio desulfuricans
ND132]
Length = 698
Score = 284 bits (726), Expect = 3e-74, Method: Composition-based stats.
Identities = 109/583 (18%), Positives = 189/583 (32%), Gaps = 76/583 (13%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M T +F+AGE+SPRL + R DLS + G N +G + +
Sbjct: 1 MSIATPAITNFTAGEISPRL-EGRTDLSKYFNGCRTLLNFHVHPHGGTSRRAGFRFVAES 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVF-----GDKKLQIVVVRSSTKWSPALFGKTYKTPYTF 115
+ + F G +L F G ++++ A + + PYT
Sbjct: 60 LGQAKPVLLIPFEYSAGQTYVLEFAEDAAGQGRMRVFSGHGLVLSDGAPYVRDI--PYTA 117
Query: 116 KDNKSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWL-GDGMISGV 174
+ L+YA + + VH DHP ++ + D +T +E+ FL P G+
Sbjct: 118 DEFDELDYAQSAGSLILVHPDHPVREMVRVDHDD---WTLEEMTFLGQPEAWGENDYPSA 174
Query: 175 KSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDK 234
+ + A T + T + R W +AD
Sbjct: 175 VCFYEQRLVLAATRSRPATLWLSRTGEFSDFRLRTREVPLDGW--------RDLEIADAN 226
Query: 235 VYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKD 294
L G++GD G + ++R Y
Sbjct: 227 G-DGLRDGKAGDNVLLLAGNGFE----ARDALKGQHPDGSTRYYRYKGTGNYATVNSNVT 281
Query: 295 VSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELS 354
++ + ++ + +W F
Sbjct: 282 LTFAAEPGANQLEAIWDEDGVLDDAAWD---------------------CFG-------- 312
Query: 355 VYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLL 414
G D E D A+ ++ A+ I ++ P + +G W L
Sbjct: 313 -----VGDRTDGPAGAEPLEDD---AIEVTLSGRQANAIEFIVPR-RALWIGTAGGEWTL 363
Query: 415 SISLSKGL---SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFN 470
S S S L ++ + G P +VG ++V GR+I+ +S E +
Sbjct: 364 SASSSDPLTPSNVKAAQEGTGGASGVRPEAVGFAALYVQRAGRKIREMSYRYESDAYVSK 423
Query: 471 EITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHM 530
++T L++H+ + QL Y +EP SI++ V L+ + + + AW +
Sbjct: 424 DLTLLSEHITEGGLTQLAYVQEPDSILYGVR-----GDGILVALTYVPD-QEVAAWSRIV 477
Query: 531 ISDKHYVLSAASFPNDNRGGTSLWMLVALSA-GEERSFTVRLN 572
V AAS ND LW+ V + GE R + L
Sbjct: 478 TDG--VVERAASVYNDAEKRDELWITVLRTVNGETRRYVEYLE 518
>gi|317152064|ref|YP_004120112.1| hypothetical protein Daes_0341 [Desulfovibrio aespoeensis Aspo-2]
gi|316942315|gb|ADU61366.1| hypothetical protein Daes_0341 [Desulfovibrio aespoeensis Aspo-2]
Length = 698
Score = 284 bits (725), Expect = 4e-74, Method: Composition-based stats.
Identities = 104/581 (17%), Positives = 185/581 (31%), Gaps = 72/581 (12%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M TT + +F+AGE+SPRL R DLS + G N +G +
Sbjct: 1 MSITTPSLTNFTAGEISPRL-AGRIDLSRYFNGCRTLENFHVHPHGGATRRCGFRFVTQA 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGD---KKLQIVVVRSSTKWSPALFGKTYKTPYTFKD 117
R+ + F +L FG+ + ++ V PY
Sbjct: 60 LNPDRAGLLVPFESNADTAYVLEFGEDAAGQGRMRVFSGHGVVMAGDAPYALDVPYRADQ 119
Query: 118 NKSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWL-GDGMISGVKS 176
+L YA G + H HP L + + ++++F+ P +G V +
Sbjct: 120 LDTLRYAQSGDELILAHPAHPVRRLTRLAHD---QWQLEDMEFIGCPETWTEGNHPSVVA 176
Query: 177 NAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVY 236
+ + A T T + R W + D
Sbjct: 177 FFEQRLVLAATPDKPGTLWFSRTGGIGDFRLRTREVPLDGW--------RDREITDSNS- 227
Query: 237 RSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVS 296
L G++GD F G + K + + +T+R A G K V+
Sbjct: 228 DGLRDGKAGDTFLLLDGDGFEKLDGL----KGQHPDRTTRYYRYKGAANLTASGADKTVT 283
Query: 297 KDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVY 356
P+ + + W E P
Sbjct: 284 -----FRHEPEGAQIEPIRDAEGELNNGFWECFE--PG---------------------- 314
Query: 357 LSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSI 416
D + A+ ++ A+ I ++ G+ + VG W L
Sbjct: 315 --------DRTEAPAGEAPLDDDAIEVTLSGRQANAIEFLVARGK-LWVGTAGGEWTLGG 365
Query: 417 SLSKGLS---IDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEI 472
SL ++ I + G A P +VG +++ GR+I+ ++ E + ++
Sbjct: 366 SLGDPVTPESIKASQEGSCGASATRPEAVGFATLYIQRAGRKIREMAYRYESDAYVSRDL 425
Query: 473 TQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMIS 532
T L++H+ + Q+ Y +EP SI++ V L+ + + + AW +
Sbjct: 426 TILSEHITKPGLTQMAYVQEPDSILYCVR-----GDGALIALTYEPD-QEVAAWSRMLTD 479
Query: 533 DKHYVLSAASFPNDNRGGTSLWMLVALSA-GEERSFTVRLN 572
V A+ N LW ++ + G ER + L
Sbjct: 480 GA--VECVAAVYNQAGKRDVLWAVIRRTVNGLERRYVEFLE 518
>gi|146276492|ref|YP_001166651.1| hypothetical protein Rsph17025_0440 [Rhodobacter sphaeroides ATCC
17025]
gi|145554733|gb|ABP69346.1| hypothetical protein Rsph17025_0440 [Rhodobacter sphaeroides ATCC
17025]
Length = 754
Score = 280 bits (715), Expect = 5e-73, Method: Composition-based stats.
Identities = 105/598 (17%), Positives = 182/598 (30%), Gaps = 66/598 (11%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M T+ + +FS+GEL P LL R D G+AK + +PL G + P
Sbjct: 1 MTRTSPPQVAFSSGELDP-LLHRRFDYQRFQTGLAKCQGFLPLAQGGVTRAPGTIYRGRT 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
R + FS +L F ++++ R TP+ S
Sbjct: 60 R-GDARCVLVPFSFAANDSCILEFTPGRMRVW--RYGALVMSGGAPYELVTPFDETSLSS 116
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL 180
L + V P L + ++T P+ + A
Sbjct: 117 LSWVQSADVVYMVDGRQPMQRLARLALD---NWTIGAQALRKGPFRVQNTDEAITLTA-- 171
Query: 181 SISQADTSTARITSDMKIFKPLDKGRSIRLGCHP----PEWAKNTNY------------- 223
A T +T+ F G ++L P W + Y
Sbjct: 172 ---SAAKGTITLTASAAFFTADHVGSLMQLRPKDNTSVPAWTADEEYGSETWGGPLVGFE 228
Query: 224 ---SIGAYIVADDKVYRSLTTGRSG-DRFGYSKGATYVKDNNITWITVLNLSSKTSRESA 279
Y + ++G +++G V + W + +
Sbjct: 229 TEPPADVLRRYGANTYLLVQGTKAGSTPPIHTEGDYMVDSDPTVWRFISDD--------- 279
Query: 280 SGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFH 339
V + + P GV W AW ++ GYPS V +
Sbjct: 280 ---VGIVRITQILSPTQARAAVTRTIPTGCI----GVPTYRWSEGAWSKRYGYPSTVEIY 332
Query: 340 NNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPF 399
RL + + + +V+ S+ G F DF G D T S + I +
Sbjct: 333 EQRLAAAATPSEPRTVWFSAVGDFQDF----LDGTEDDQSFAYTVAGSTSVNRIINLQRG 388
Query: 400 GEGVLVGCDTSLWL----LSISLSKGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRR 455
G+ + + S+ + F SG G P++ +F+ +R
Sbjct: 389 AAGLHIFALGEEYSTRSETRSSVIGPKNAVFGLDSGVGSSTAKPITPSGNPIFISRDRKR 448
Query: 456 IKYISGSTEQGF-RFNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGC 514
+ + S +Q +++ A H+ Q+V+Q P W+ L L+
Sbjct: 449 VLEMVYSLDQDRPVSRVLSRTAQHVGGAGFEQIVWQAAPEPTAWLRL-----GTGELVAM 503
Query: 515 RFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLV-ALSAGEERSFTVRL 571
+ + E W ++ +V + A +P G L M V G+ L
Sbjct: 504 VYDPDEE-VLGWAPVPVAGG-FVDALAVYPAAGGGSDILTMAVLREIDGQTVRMIEEL 559
>gi|242278913|ref|YP_002991042.1| hypothetical protein Desal_1441 [Desulfovibrio salexigens DSM 2638]
gi|242121807|gb|ACS79503.1| hypothetical protein Desal_1441 [Desulfovibrio salexigens DSM 2638]
Length = 698
Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats.
Identities = 73/285 (25%), Positives = 123/285 (43%), Gaps = 28/285 (9%)
Query: 303 SVAPQSQTLFQAGVSVVSWFMSA---------WGEQEGYPSHVTFHNNRLLFSGSKGDEL 353
V P+ Q + S V W M W ++G+PS VTF RL F+ S +
Sbjct: 245 LVHPEVQPYKLSRTSHVDWKMELVAFSSPPQEWNSEKGFPSCVTFFEERLCFAASPSNPQ 304
Query: 354 SVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWL 413
++++S G++ DF++ D A T ++ + I WM + +++G W
Sbjct: 305 TIWMSKAGSYEDFAVSSPVVDDD---ACTYTLSADQVNAIRWMVS-AKKLIMGTSGGEWW 360
Query: 414 LSISLS----KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFR 468
LS S S+ RR + G A PPV VG ++F+ GR I+ +S S E G+
Sbjct: 361 LSGGSSLDSVTPNSVMVRRETTHGSAAIPPVVVGGVMLFLQREGRTIRELSYSFEADGYT 420
Query: 469 FNEITQLADHLFNQ-RILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWH 527
++T LA+HL I + YQ+ P S++W+ + ++G + E E +H
Sbjct: 421 APDLTILAEHLTRSNSITEWAYQQSPDSVIWMTRDDG-----VMVGLTYQREHE-VVGFH 474
Query: 528 THMISDKHYVLSAASFPNDNRGGTSLWMLVALSAGEERSFTVRLN 572
H K S + P + + ++ G R + R+
Sbjct: 475 RHTTDGKF--RSVCTVPGPTQEEVWV-VVEREVGGISRKYVERME 516
Score = 100 bits (248), Expect = 8e-19, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 36/120 (30%), Gaps = 4/120 (3%)
Query: 53 LMQEYRDCRLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTP 112
E R + R+ F +L F D+ ++I ++P
Sbjct: 167 GAVEAVQVREINPATRLIPFEFSTEQAYVLEFTDRNIRIF-KNGGIVVDDQGSPVEIQSP 225
Query: 113 YTFKDNKSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMIS 172
YT D + + VH + P+ L D + + + F PP +
Sbjct: 226 YTETDLPGIRFTQSADVMYLVHPEVQPYKLSRTSHVD---WKMELVAFSSPPQEWNSEKG 282
Score = 74.1 bits (180), Expect = 6e-11, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 4 TTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
+ +FSAGELSPRL R DL+ ++ G+A+ N+ +G + R+
Sbjct: 3 VSLIMTNFSAGELSPRL-GGRVDLAKYSNGLAELENMFTHPHGGASRRTGFRFIREV 58
>gi|288959382|ref|YP_003449723.1| hypothetical protein AZL_025410 [Azospirillum sp. B510]
gi|288911690|dbj|BAI73179.1| hypothetical protein AZL_025410 [Azospirillum sp. B510]
Length = 665
Score = 263 bits (672), Expect = 5e-68, Method: Composition-based stats.
Identities = 102/581 (17%), Positives = 185/581 (31%), Gaps = 109/581 (18%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M T +++F+ GE+SPR+ + R DL V + N++ + GP P +
Sbjct: 1 MSRATPAQYAFTGGEISPRI-KGRTDLERIRNAVEEMTNMVAVPEGPSERRPGTRFANST 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
+ S + F ++ + + + T+ Y+ D
Sbjct: 60 K-GDASAVLIPFEFSTQQAYIIEATAGAFRFYRDGGQIVSGSSPYEVTHA--YSAADLPF 116
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL 180
L + V HPP L ++ E P+L + S
Sbjct: 117 LRWTQSADVLFLVCPGHPPRTLSRTGH---TAWNLAEWVMRDGPYL------DLNSGPTT 167
Query: 181 SISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLT 240
+ + +T+ +F D GR +RL W G + S+T
Sbjct: 168 LTPSGTSGSVTLTASAALFAATDVGRLVRLRI-ANVW--------GWCRITAFGSVTSVT 218
Query: 241 TGRSGDRFGYSKGATYV----KDNNITWITVLNLSSKTSRESASGAVAP--YYVWGDIKD 294
G + A + TW T + +A V + +
Sbjct: 219 ATVEAAWGGTTATAFWRLGAWGATTGTWPTAVTFHENRLAFAALQTVWLSCSGDFDNFGP 278
Query: 295 VSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELS 354
+++G + + T V+V+ W SA+G +L +G+ G +
Sbjct: 279 TTENGTVAADNAITLTAADDQVNVIRWLRSAFG---------------VLIAGTSGGPFA 323
Query: 355 VYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLL 414
+ S +ALT + + +H V + +
Sbjct: 324 IQAS-----------------SLREALTPI--NATMPRVH----------VAGAADVQPV 354
Query: 415 SISLSKGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGST-EQGFRFNEIT 473
++ + LVF RR+ ++ G+ ++
Sbjct: 355 RVATN--------------------------LVFPSRSRRRLHLLNAEFAAAGYSAPDLA 388
Query: 474 QLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISD 533
+A H+ + + YQ+EP S++W+VL+ L G + E + AWH H +
Sbjct: 389 LVASHITRHAVKAMAYQQEPWSVMWLVLDDG-----TLAGVTYVPELD-ILAWHRHPLGG 442
Query: 534 KHY-VLSAASFPNDNRGGTSLWMLVAL-SAGEERSFTVRLN 572
VLS A P +R LW++V AG R L
Sbjct: 443 TAVKVLSVACIPAADR--DELWLVVERVVAGGIRRHVEILE 481
>gi|187736306|ref|YP_001878418.1| hypothetical protein Amuc_1819 [Akkermansia muciniphila ATCC
BAA-835]
gi|187426358|gb|ACD05637.1| hypothetical protein Amuc_1819 [Akkermansia muciniphila ATCC
BAA-835]
Length = 822
Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats.
Identities = 69/258 (26%), Positives = 107/258 (41%), Gaps = 18/258 (6%)
Query: 317 SVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYD 376
W A+G + GYP V FH RL F G+ G +++ S F F+
Sbjct: 409 DTNDWSFGAFGVRNGYPCTVEFHQGRLWFGGTPGQPQTLWASRVDDFSAFTPGIP----- 463
Query: 377 PTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGLSID---FRRVSGSG 433
+ + + I W+ G+++G W LS + S+GL+ F R SG G
Sbjct: 464 ADSPMILTMAASQQNRISWIASL-RGLMIGTSEGEWRLSATNSEGLNASNAGFERHSGVG 522
Query: 434 VYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLADHLFNQRILQLVYQEE 492
+ +SV + L+FV G +++ + S E G++ +++ L+DHL + I+ Q
Sbjct: 523 SASLDALSVENSLLFVQQGGMKVRELFYSLEADGYQTRDVSLLSDHLLGEGIVDWTVQRS 582
Query: 493 PHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPND-NRGGT 551
VW VL C + AWH H + + +LS AS N
Sbjct: 583 TAFHVWCVLGDGS------AVCMTLNREQNVVAWHAHRL-EHGRILSVASLRGSRNTPDE 635
Query: 552 SLWMLVALSAGEERSFTV 569
+W VA GEE TV
Sbjct: 636 EVWFAVARGEGEEACITV 653
Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats.
Identities = 60/381 (15%), Positives = 112/381 (29%), Gaps = 40/381 (10%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M + SF+AGEL+P L R DL ++G ++ N + +G L P +
Sbjct: 1 MAKQVLQRLSFTAGELTPWL-AGRADLDPVSRGASRLINFLVSPFGGLRRRPGTRLVARA 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPY-TFKDNK 119
R+ SF G +L G ++ + TP+ T +
Sbjct: 60 GCREGMVRLVSFKYSTGVQFMLEVGRGYVRYF-KNGALLTDTEGGVLETLTPWKTDEQVS 118
Query: 120 SLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAK 179
+L V PP L D D + + ++F P+ +++ V+ +
Sbjct: 119 NLRMQQLNDVIYCVEPSTPPMTLARYADDD---WRLEALEFSGIPYES-SLLNAVRLECR 174
Query: 180 LSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSL 239
+ + + + T+D +F P +G+ VA+
Sbjct: 175 M-VREGGVNRLLATADDDVFTPEMEGKEFL-----------RITRKYGETVAEGNQMPFY 222
Query: 240 TTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDG 299
+ + +++ + G P + +
Sbjct: 223 HLTTLSRDLYKGETFSMNREDGWRQAYTCIRDFSRESDYQEGVDRPERYTAFFEKGADAS 282
Query: 300 RSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLS- 358
I V + +W + W GYP + NR V+ S
Sbjct: 283 TRIYVNG-----AWTLETTGTWD-AEWEICRGYPDGSNYLPNR---------PELVWHSV 327
Query: 359 -----SFGAFYDFSLDGEYGC 374
G +F+L G
Sbjct: 328 KSFQQREGFRNNFTLSGNEEE 348
>gi|290968641|ref|ZP_06560179.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str.
28L]
gi|290781294|gb|EFD93884.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str.
28L]
Length = 1039
Score = 241 bits (614), Expect = 3e-61, Method: Composition-based stats.
Identities = 80/465 (17%), Positives = 158/465 (33%), Gaps = 55/465 (11%)
Query: 153 FT-FDEIKFLPPP------WLGDGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKG 205
++ FD + P + + + + ++ITS IF K
Sbjct: 368 WSDFDNVALFGNPTGACFIYFLAAEKEETPHPDSIEDTSLQITDSKITSSNSIFVQALKN 427
Query: 206 RSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWI 265
I++ + VY S S+ N W
Sbjct: 428 TKIKIVQTQQSKSVEMTLGENEEEQTSGAVYVGEKWKISTSGIHNSRIVIERSLNGQQWH 487
Query: 266 TVLNLSSKTSRES-ASGAVAP-------YYVWGDIKDVSKDGRSISVAPQSQT------- 310
SK + SG+ G I KD ++SV +
Sbjct: 488 EYRKYISKDDQNFMESGSEKEKCYLRVKAKTQGKINTERKDSDNLSVVLSALPFENEGII 547
Query: 311 -----------------LFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDEL 353
V V ++ S+W ++ GYP F +RL+F+G+K +
Sbjct: 548 EITDIVSPKEIKYTAIEPVIPNVPVDAFAFSSWNDRNGYPKLSCFFQDRLVFAGTKKEPY 607
Query: 354 SVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWL 413
S++ S G + +FS++ G A+ + + I + P + ++V + W+
Sbjct: 608 SLWFSRTGDYNNFSVEKAEGTVTEDSAIKLDLIVRNLYEIRHLVPSND-LIVLTSGNEWI 666
Query: 414 LSISLS-KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNE 471
+S + + + G C P +G+ L++V G I+ S + + +E
Sbjct: 667 ISGDTAITPTKCTPKVQTMRGASNCKPWHIGNRLIYVQRDGGTIRDFGYSYDSDNYNGDE 726
Query: 472 ITQLADHLF-NQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHM 530
+ A HL +++ Y + P+S ++ V E + + C + + AW TH
Sbjct: 727 LNLFASHLTKRHQMVSSAYCQNPYSTLYFVREDGE------IICLMLIKEQNVCAW-THW 779
Query: 531 ISDKHYVLSAASFPNDNRGGTSLWMLVALSAGEER--SFTVRLNL 573
+ Y+ + G L+++V + E + + + +L
Sbjct: 780 NTHGKYLDCCSVL---ENGKDYLYVIVERTNREAQIVRYLEKFDL 821
Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats.
Identities = 49/323 (15%), Positives = 92/323 (28%), Gaps = 22/323 (6%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M N T++SF+ GE+SP + R DL + + ++ N + YG + +
Sbjct: 1 MQNVFITQNSFTTGEISPEV-AERTDLEKYKSALLQAENAVVSPYGSVSRRTGSKYIGAI 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
+ + + F LL G K +++ W + TP+ + K
Sbjct: 60 KYADKEAVLVPFMDSSDRSYLLEVGYKYIRV--------WKDETMEQEIDTPFEYP--KE 109
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLG----DGMISGVKS 176
L + G TA +P + LL+ + + P + +S V
Sbjct: 110 LNFTQSGDTAFICSGRYPVYELLH-----GRYWELRKFDIPKPYFDDIISAIENVSDVNY 164
Query: 177 NAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVY 236
+ + T T + G + + +
Sbjct: 165 TESDTPVFSQTKAGDYTFTPTVSGLYKIVLFGGAGGKKGTIEHYAGSTKHDEAIYHYEYG 224
Query: 237 RSLTTGRSGDR-FGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAP-YYVWGDIKD 294
+ G+ TY +R G V + G +D
Sbjct: 225 VAGNEGQKKIVTVKLKAKTTYSIHVGKGGEDGDKHKKGIARGWEEGDVYNSFLNGGPGED 284
Query: 295 VSKDGRSISVAPQSQTLFQAGVS 317
+ G S V ++ S
Sbjct: 285 TTVKGNSDGVNIVAKGGATFTGS 307
>gi|260549511|ref|ZP_05823729.1| Bbp13 [Acinetobacter sp. RUH2624]
gi|260407304|gb|EEX00779.1| Bbp13 [Acinetobacter sp. RUH2624]
Length = 678
Score = 234 bits (597), Expect = 3e-59, Method: Composition-based stats.
Identities = 87/548 (15%), Positives = 168/548 (30%), Gaps = 72/548 (13%)
Query: 7 TKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRS 66
++SF+ G +SP + R D + + GVAK +N+ +G LV +
Sbjct: 1 MQYSFNGGVISPD-MFGRIDQAKYQTGVAKCKNMYVELFGGLVYRAGFRYVHHYPKTLGK 59
Query: 67 NRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVF 126
R+ F + +L F + R + + PY + L YA
Sbjct: 60 MRLIRFVFSEEQAVVLAFRAGAVNFFA-RGGMLLNNVGEPLEVELPYAEEHLMQLRYAQS 118
Query: 127 GSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQAD 186
H D+PP ++ + S +S+
Sbjct: 119 ADVVTITHPDYPPRKIIRKGATEW-------------------------STEVVSVGYGL 153
Query: 187 TSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAY-IVADDKVYRSLTTGRSG 245
T + + I +G H ++ +Y + A + +T
Sbjct: 154 TPPQNVAATAHIEDKYKEG----GNMHDSYIERDYSYQVTAVDEQNESAASTKVTVKNDI 209
Query: 246 DRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVA 305
G T+ T + L S + + D + SI+
Sbjct: 210 TLAGNYNTITWDVVTGATRYNIFKLRSGLAS-----YIGETTETSFTDDNIETNGSIT-P 263
Query: 306 PQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYD 365
P + F+ P+ V +H R ++ G + +S +
Sbjct: 264 PLIRNPFEFN-----------------PTAVAYHGQRKVYGGGYQSPQWIRMSRTATDDN 306
Query: 366 FSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLS-KGLSI 424
F D ++ + + + + +LV ++W LS + S+
Sbjct: 307 FGYHIPTQDTD---SIQIRFAARDGNGVKHLITLND-LLVLTSGAMWKLSSDGAMTAASV 362
Query: 425 DFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKY---ISGSTEQGFRFNEITQLADHLFN 481
+ + +G PV V VF + SG ++ +++ + LF+
Sbjct: 363 NMNKQYSTGANDVTPVEVDGAAVFASDQTGHVHEASLASGYNASYYQTLDLSIMCPQLFD 422
Query: 482 -QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSA 540
+I+ P +I++ V + LL + + +AW H K LS
Sbjct: 423 GHKIIDCAAIRNPLNIIYFVRDDG-----VLLSLTYEP-QQQVWAWAEHHTDGKF--LSV 474
Query: 541 ASFPNDNR 548
A P +N+
Sbjct: 475 AEIPEENQ 482
>gi|260557972|ref|ZP_05830184.1| Bbp13 [Acinetobacter baumannii ATCC 19606]
gi|260408482|gb|EEX01788.1| Bbp13 [Acinetobacter baumannii ATCC 19606]
Length = 678
Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats.
Identities = 80/560 (14%), Positives = 162/560 (28%), Gaps = 72/560 (12%)
Query: 7 TKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRS 66
++SF+ G +SP + R D + + GVAK +NL +G +V +
Sbjct: 1 MQYSFNGGVISPD-MFGRIDQAKYQTGVAKCKNLYVELFGGVVYRAGFRYVHHYPKTMGK 59
Query: 67 NRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVF 126
R+ F + +L + + PY L YA
Sbjct: 60 MRLIRFVFSEEQAVVLAIRAGAINFFA-DGGMLLNENNEPLEVAVPYAEDHLMQLRYAQS 118
Query: 127 GSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQAD 186
H ++PP ++ + I+ + + G G V + A +
Sbjct: 119 ADVVTITHPNYPPRKIIRKSATEWIT-ELVTVGY------GVGTPQNVAATAHIEDKYKP 171
Query: 187 TSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGD 246
S + D + E A + + +
Sbjct: 172 GG-----SMHDSYIERDYSYQVTAVDEQNESAASLKVVVQNDLTLAGNY----------- 215
Query: 247 RFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAP 306
T+ + L S + + + S I
Sbjct: 216 -----NTITWDAVTGANRYNIFKLRSGLASFIGETTETSFTDDNIETNGSITPPLIR--- 267
Query: 307 QSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDF 366
E YP+ V +H R ++ G + +S +F
Sbjct: 268 --------------------NPFEFYPTAVAYHGQRKVYGGGYKSPQWIRMSRTATDDNF 307
Query: 367 SLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLS-KGLSID 425
D ++ + + + + +++ +LW +S + S++
Sbjct: 308 GYHIPTQDTD---SIQIRFAARDGNGVKHLVTMSDLLIL-TSGALWKMSADGAVTAASVN 363
Query: 426 FRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYI---SGSTEQGFRFNEITQLADHLFNQ 482
+ +G PV V +F + I SG ++ +++ + LF+
Sbjct: 364 MNKQYSTGANDVTPVEVDGATIFSSDQTGHVHEISLASGYNASFYQTIDLSIMCPQLFDG 423
Query: 483 R-ILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAA 541
+ I+ P +I++ V LL + + + +AW H + K LS A
Sbjct: 424 QKIIDCALLRNPLNIIYFVR-----GDGVLLSLTYEPK-QQVWAWAEHHTNGKF--LSIA 475
Query: 542 SFPNDNRGGTSLWMLVALSA 561
P D++ L+ +
Sbjct: 476 EIPEDDQSV--LYAFIERDG 493
>gi|254251749|ref|ZP_04945067.1| hypothetical protein BDAG_00946 [Burkholderia dolosa AUO158]
gi|124894358|gb|EAY68238.1| hypothetical protein BDAG_00946 [Burkholderia dolosa AUO158]
Length = 545
Score = 221 bits (562), Expect = 3e-55, Method: Composition-based stats.
Identities = 56/265 (21%), Positives = 100/265 (37%), Gaps = 23/265 (8%)
Query: 315 GVSVVSWFMS--AWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEY 372
W + W +GYP V+ + RL +GS G V+ S+ G +YDF+
Sbjct: 129 TAPPDGWMLKTFMWNPTDGYPCAVSLYQQRLYAAGSSGYPERVWASATGLYYDFTPGT-- 186
Query: 373 GCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLL---SISLSKGLSIDFRRV 429
D + V + I + + V + + S+ +I+ R
Sbjct: 187 ---DDGDGFSYDVASDQVNQIMHLAS-SRILTVLTQGEEFTIDGGSVGSITPTNINVRSQ 242
Query: 430 SGSGVYACPPVSVGDCLVFVCGVGRRIKYISGST-EQGFRFNEITQLADHLFNQRILQLV 488
S G PV VG+ L+F ++I+ ++ FR +T+LA H+ ++ +
Sbjct: 243 SIYGTARPRPVRVGNELIFPQRAAKKIRSMAYDFNTDSFRSQNLTRLAAHITESGVVDIA 302
Query: 489 YQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNR 548
+Q EP +VW+V + L+ + + E + H S P +
Sbjct: 303 FQAEPTPVVWMVR-----ADGVLISMTYDRD-ENVCGFARHTTDGAF--KSVCCIPGAD- 353
Query: 549 GGTSLWMLVALS-AGEERSFTVRLN 572
G L+ +V + G RL+
Sbjct: 354 -GDVLFAVVQRTINGNVVQNVERLD 377
>gi|257139843|ref|ZP_05588105.1| hypothetical protein BthaA_11681 [Burkholderia thailandensis E264]
Length = 489
Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats.
Identities = 56/320 (17%), Positives = 112/320 (35%), Gaps = 23/320 (7%)
Query: 260 NNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVV 319
+ R G+ + I + +
Sbjct: 18 GGTLGAVYEYGVGQAWRAQDVGSYVEINGGLVQLIAFESASRIFGVIKRELASTLTAPAS 77
Query: 320 SWFM--SAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDP 377
W + S W +GYP+ V+ RL +GS G + V+ S G + DF+ + G
Sbjct: 78 GWALKSSMWNSIDGYPAAVSLFKQRLYAAGSTGYPMRVWASGIGLYLDFTPGTKDG---- 133
Query: 378 TKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSK---GLSIDFRRVSGSGV 434
+A + + + + + + ++ + +I+ S G
Sbjct: 134 -EAFGYDMASDQVNQTVHLAS-AKILAALTQGEEFTVTGGSAGAITPTNINVDSQSVYGC 191
Query: 435 YACPPVSVGDCLVFVCGVGRRIKYISGST-EQGFRFNEITQLADHLFNQRILQLVYQEEP 493
PV VG+ +V+V G++++ ++ +R +T+LA H+ I+ + +Q EP
Sbjct: 192 ARARPVRVGNEIVYVQRAGKKVRAMTYDLNTDAYRSQNLTRLAAHVTESGIVDVAFQAEP 251
Query: 494 HSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSL 553
+VW+V + L+ + + E + H+ S P D G L
Sbjct: 252 TPVVWMVR-----ADGVLVSMTYDRD-ENVCGFARHVTDGLF--KSVCCIPGDE--GDVL 301
Query: 554 WMLVALS-AGEERSFTVRLN 572
+ +V + G + RL+
Sbjct: 302 FAVVQRTINGATVQYVERLD 321
>gi|83720451|ref|YP_441475.1| hypothetical protein BTH_I0919 [Burkholderia thailandensis E264]
gi|83654276|gb|ABC38339.1| conserved hypothetical protein [Burkholderia thailandensis E264]
Length = 405
Score = 217 bits (551), Expect = 6e-54, Method: Composition-based stats.
Identities = 51/253 (20%), Positives = 101/253 (39%), Gaps = 21/253 (8%)
Query: 325 AWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTA 384
W +GYP+ V+ RL +GS G + V+ S G + DF+ + G +A
Sbjct: 1 MWNSIDGYPAAVSLFKQRLYAAGSTGYPMRVWASGIGLYLDFTPGTKDG-----EAFGYD 55
Query: 385 VTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSK---GLSIDFRRVSGSGVYACPPVS 441
+ + + + + + ++ + +I+ S G PV
Sbjct: 56 MASDQVNQTVHLAS-AKILAALTQGEEFTVTGGSAGAITPTNINVDSQSVYGCARARPVR 114
Query: 442 VGDCLVFVCGVGRRIKYISGST-EQGFRFNEITQLADHLFNQRILQLVYQEEPHSIVWVV 500
VG+ +V+V G++++ ++ +R +T+LA H+ I+ + +Q EP +VW+V
Sbjct: 115 VGNEIVYVQRAGKKVRAMTYDLNTDAYRSQNLTRLAAHVTESGIVDVAFQAEPTPVVWMV 174
Query: 501 LEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVALS 560
+ L+ + + E + H+ S P D G L+ +V +
Sbjct: 175 R-----ADGVLVSMTYDRD-ENVCGFARHVTDGLF--KSVCCIPGDE--GDVLFAVVQRT 224
Query: 561 -AGEERSFTVRLN 572
G + RL+
Sbjct: 225 INGATVQYVERLD 237
>gi|42526655|ref|NP_971753.1| hypothetical protein TDE1145 [Treponema denticola ATCC 35405]
gi|41816848|gb|AAS11634.1| hypothetical protein TDE_1145 [Treponema denticola ATCC 35405]
Length = 647
Score = 193 bits (491), Expect = 5e-47, Method: Composition-based stats.
Identities = 71/561 (12%), Positives = 163/561 (29%), Gaps = 83/561 (14%)
Query: 9 HSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNR 68
+F+ GE+S L R DL ++ V++ N ++ G + + + R
Sbjct: 4 TNFAGGEVSKNLY-GRIDLPIYQNSVSRLENFDIMQTGGIKRRGGTERIGKLK---GYAR 59
Query: 69 VFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYK-TP----YTFKDNKSLEY 123
+ F + + + G + ++I + + A F + TP Y D ++Y
Sbjct: 60 LIPFIVNNTLSFIFEIGSEYIRIWKN--GSLLTLAGFPVEFSPTPDLPLYQKSDLSEIQY 117
Query: 124 AVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAK-LSI 182
A + H+ + P+ + + + +
Sbjct: 118 AQTYDSLYLAHRHYKPYVIKWQGGDAFT-------------------FGSLNITGNAHKL 158
Query: 183 SQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTG 242
+ S + +F+ GR + + KV+
Sbjct: 159 PF--QGSDNYPSCVALFQ----GRLFF-----------ASTIREPQKIWASKVFEYENFT 201
Query: 243 RSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSI 302
+ + + S+K ++S
Sbjct: 202 YFDTVVSKT--------TQLKNPDLRVFSAKAVKDSDVLTELTKDFTDITNITDYYVSGH 253
Query: 303 SVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGA 362
P+ + + A ++E + N
Sbjct: 254 KGIPKDTKVLSVTSDSMKISKPATVDKEDIVLSIHLWRN-------ADSPQ------ADD 300
Query: 363 FYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGL 422
+ D + P A + I W+ P + +++G ++S W++S
Sbjct: 301 YKDTEIINNV--TAPDHAFYFEIGSDKNDKIKWITPSKD-LIIGTESSEWVMS-DGVTAQ 356
Query: 423 SIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGST-EQGFRFNEITQLADHLF- 480
I+ + S GV +G ++++ GR ++ + E ++ ++TQ A HL
Sbjct: 357 RIEVQLQSRYGVADLQGSLIGRSVIYIGQGGRSLRDYAYDFQEHTYKSIDLTQAASHLLI 416
Query: 481 NQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSA 540
+ + Y P +++ LE + G AW ++ + + +
Sbjct: 417 ESKAVDFDYTNSPVQKIYLSLEDGSACV-----LLYDKNT-GIAAWTKIVLGNGK-IKNI 469
Query: 541 ASFPNDNRGGTSLWMLVALSA 561
+ P +G ++ V
Sbjct: 470 VTVPGL-KGFDDVYFEVERKG 489
>gi|54302254|ref|YP_132247.1| hypothetical protein PBPRB0574 [Photobacterium profundum SS9]
gi|46915675|emb|CAG22447.1| hypothetical protein PBPRB0574 [Photobacterium profundum SS9]
Length = 919
Score = 185 bits (470), Expect = 2e-44, Method: Composition-based stats.
Identities = 50/253 (19%), Positives = 93/253 (36%), Gaps = 20/253 (7%)
Query: 314 AGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYG 373
S W + W GYP T+ RL + + +V+LS +F DFS
Sbjct: 405 TSRSTYKWAIEIWRNSTGYPRCGTYFQQRLSMANTISHPQTVWLSRTDSFNDFSKTRPIL 464
Query: 374 CYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGLSI----DFRRV 429
D + + + I + P +L LW L+ S +
Sbjct: 465 ADDSMRYD---INSLQVNEIFNIVPLNSLLLF-TSGGLWSLAQDQQGAFSAESPPSVKMQ 520
Query: 430 SGSGVYACPPVSVGDCLVFVCGVGRRIKYISGS-TEQGFRFNEITQLADHLFNQ-RILQL 487
+ G P+ G ++V R ++ I S + F ++T A HLF R+++
Sbjct: 521 NYEGANKLRPIVAGSTAIYVQQGDRIVRDIQFSWSSDSFEGVDLTVRASHLFKHKRVVEW 580
Query: 488 VYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDN 547
Y + P ++WV+ + + + E + + W H + K+ + AS +
Sbjct: 581 AYAKNPDKLIWVIFDDGTAAT-----LTYMKE-QQIWGWCPHTTNGKY--KNVASV--EE 630
Query: 548 RGGTSLWMLVALS 560
+S++ +V
Sbjct: 631 GSRSSIYFVVERI 643
Score = 165 bits (416), Expect = 3e-38, Method: Composition-based stats.
Identities = 51/368 (13%), Positives = 100/368 (27%), Gaps = 27/368 (7%)
Query: 6 WTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPR 65
++ S SAGELSP + R D + G+AK+ N +G + + P
Sbjct: 5 LSQPSMSAGELSPE-MYGRVDTDHYRIGLAKAENFFVNYHGGISNRPGTT-LSYITARNE 62
Query: 66 SNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAV 125
+ F +L FG + +++ + + + TPY + L Y
Sbjct: 63 VVALIPFQFSAFDSFMLEFGTEYMRV-MSKGKYITDNSGVKIQVVTPYLAGEILDLSYTQ 121
Query: 126 FGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQA 185
H++H + I + + + P+ + A +
Sbjct: 122 SADVLTIFHRNHAIQQIKRYS---NIDWRVEPLINKLGPFESININESQFMYADKNGD-- 176
Query: 186 DTSTARITSDMKIFKPLDKGRSIRLGCHPP----EWAKNTNYSIGAYIVADDKVYRSLTT 241
+ S+ F G+ + L +W + + G Y
Sbjct: 177 VGEQITLISNFDAFTSDLVGKMVYLDQEETGDISQWMQRYEVAEGDQTYNAGNYYICTKA 236
Query: 242 GRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGD-IKDVSKDGR 300
+ + V W +R++ G Y G + +
Sbjct: 237 ELYNGKKAQTGDIAPVHSTGERWDGPGKFLPDDNRDANIGVRWAYLNSGYGVVKIISVTD 296
Query: 301 SISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSF 360
+ + V W +P T R + L+
Sbjct: 297 ARHAICEVLVRLPDSVVGGERSKLTWN----FPGETT---QRTFSLATP--PLT-----S 342
Query: 361 GAFYDFSL 368
DF++
Sbjct: 343 NTMKDFTV 350
>gi|226940469|ref|YP_002795543.1| hypothetical protein LHK_01546 [Laribacter hongkongensis HLHK9]
gi|226715396|gb|ACO74534.1| hypothetical protein LHK_01546 [Laribacter hongkongensis HLHK9]
Length = 874
Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats.
Identities = 68/381 (17%), Positives = 136/381 (35%), Gaps = 33/381 (8%)
Query: 210 LGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLN 269
G A + + Y V K + G+ W +
Sbjct: 329 TGSGARLSATVGSVACDGYSVTAIKTVTVIDGGKGYTSPSIVTVVKQDGRPITGWGPIHA 388
Query: 270 LSSKTSRE------------SASGAVAPYYVWGDIKDVSK-DGRSISVAPQSQTLFQAGV 316
S ++ + A+ P + G I V+ +G S AP + G
Sbjct: 389 TYSVSTSPNTVQLAVTDSGGGSGAALEPVIIDGAITAVNVINGGSGYFAPVVSVSYAGGG 448
Query: 317 SVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYD 376
S ++ YP V++ R F+G+ +++++ G + D
Sbjct: 449 SGATFGQPVVKSSGDYPGAVSYFEQRRCFAGTTRKPQNIWMTKSGTESNMGYSLPVRDDD 508
Query: 377 PTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGLS---IDFRRVSGSG 433
+ V+ A+TI + P + +L+ ++ W ++ S ++ I R S G
Sbjct: 509 R---IAFRVSAREANTIRHIVPLAQLLLL-TSSAEWRVTSVNSDAITPRSISVRPQSYIG 564
Query: 434 VYACPPVSVGDCLVFVCGVGRRIKYISGSTEQ-GFRFNEITQLADHLFNQ-RILQLVYQE 491
PV + + L++ G ++ ++ + + GF +++ A HLF+ I+ + + +
Sbjct: 565 ASNVQPVIINNTLIYASARGGHVRELAYNWQAGGFVTGDLSIRAPHLFDDFEIVDMAFGK 624
Query: 492 EPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGT 551
P +VW V +S L+G + E + AWH H S A+
Sbjct: 625 SPQPVVWFV-----SSSGCLIGLTYVPE-QQVGAWHWHDTDG--VFESCAAV--AEGAED 674
Query: 552 SLWMLVALSA-GEERSFTVRL 571
L+ ++ + G R + R+
Sbjct: 675 VLYCVIRRTVNGCSRRYVERM 695
Score = 166 bits (419), Expect = 1e-38, Method: Composition-based stats.
Identities = 53/318 (16%), Positives = 94/318 (29%), Gaps = 19/318 (5%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M + SF+ GE++P R D + + G+A RN + +GP ++ R+
Sbjct: 1 MATVKLLQRSFAGGEVTPEFF-GRIDDAKYQSGLAVCRNFVLAPHGPAMNRAGFAFVREV 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSST-KWSPALFGKTYKTPYTFKDNK 119
+ R+ F+ ++ G + ++ + PY +
Sbjct: 60 KDSNLKVRLIPFTYSTTQTMVIELGAGYFRFHTQGATLMQPDAPDSPYEVSNPYREDELF 119
Query: 120 SLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLP--PPWLGDGMISGVKSN 177
L Y VH +HPP L + ++ + P P + S
Sbjct: 120 DLHYVQSADVMTLVHPNHPPQELRRLG---ATNWELKPVSLQPVIAPPENAAASTAGCSE 176
Query: 178 AKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVAD---DK 234
AK T+ + + RS + +I A
Sbjct: 177 AKYDYEYVVTAVMVDLVNESAASNVATVRS-------NVYETGCTNTISWSASAGAYRYN 229
Query: 235 VYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKD 294
VY+ G G + G + V DN ++ A + G
Sbjct: 230 VYK--KEGGVYGYIGQTAGLSLVDDNISPDLSKTPPIYDNVFSVAGQIESVPVTAGGSFY 287
Query: 295 VSKDGRSISVAPQSQTLF 312
+ G SV + LF
Sbjct: 288 GTHTGIIQSVTVLNGVLF 305
>gi|291334666|gb|ADD94313.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C695]
Length = 189
Score = 177 bits (448), Expect = 5e-42, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 78/175 (44%), Gaps = 13/175 (7%)
Query: 401 EGVLVGCDTSLWLLSISLS----KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRI 456
+++G + +S + +I ++ S +G ++VG+ +F+ R++
Sbjct: 5 RTLIIGTAGGEFAVSGGGTDIAITPTNILIKKQSNNGAANVDALAVGNATLFLQRARRKL 64
Query: 457 KYISGSTE-QGFRFNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCR 515
+ ++ + + G+ ++T LA+H+ QL YQ+EP+ ++W V +L+G
Sbjct: 65 RELAYNFDVDGYVAPDLTILAEHISEGGFKQLSYQQEPNQVIWGVRNDG-----QLVGLT 119
Query: 516 FSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVALS-AGEERSFTV 569
+ E + AWH H+ S A+ P D+ W++ + G + +
Sbjct: 120 YQRE-QQVVAWHRHIFGGSAVCESVATIPTDDS-EYQTWVINKRTINGSTKRYVE 172
>gi|291334457|gb|ADD94111.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1161]
Length = 206
Score = 174 bits (440), Expect = 4e-41, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 78/176 (44%), Gaps = 13/176 (7%)
Query: 400 GEGVLVGCDTSLWLLSISLS----KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRR 455
V++G + +S + +I ++ S +G ++VG+ +F+ R+
Sbjct: 3 DGHVIIGTAGGEFAVSGGGTDIAITPTNILIKKQSNNGAANVDALAVGNATLFLQRARRK 62
Query: 456 IKYISGSTE-QGFRFNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGC 514
++ ++ + + G+ ++T LA+H+ QL YQ+EP+ ++W V +L+G
Sbjct: 63 LRELAYNFDVDGYVAPDLTILAEHISEGGFKQLSYQQEPNQVIWGVRNDG-----QLVGL 117
Query: 515 RFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVALS-AGEERSFTV 569
+ E + AWH H+ S A+ P D+ W++ + G + +
Sbjct: 118 TYQRE-QQVVAWHRHIFGGSAVCESVATIPTDDS-EYQTWVINKRTINGSTKRYVE 171
>gi|291336928|gb|ADD96456.1| hypothetical protein [uncultured organism MedDCM-OCT-S09-C787]
Length = 138
Score = 173 bits (438), Expect = 8e-41, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 49/140 (35%), Gaps = 3/140 (2%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M +F+ GELSPRL R DL+ + G N+I +G Q +
Sbjct: 1 MARVAVQLTNFTGGELSPRL-DGRNDLAKYPTGCKTLENMIVFPHGSAARRSGTQFVAEV 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
+ + R+ F +L FG++ ++ +PY +
Sbjct: 60 KDSSKETRLIPFEFSTTQTYMLEFGNQYIRFYKDNGQILS--GGSAYEISSPYLEAELFD 117
Query: 121 LEYAVFGSTAVFVHKDHPPH 140
++YA H +HP
Sbjct: 118 IKYAQSADVMYICHPNHPVK 137
>gi|291336965|gb|ADD96491.1| hypothetical protein [uncultured organism MedDCM-OCT-S11-C1587]
Length = 474
Score = 147 bits (371), Expect = 4e-33, Method: Composition-based stats.
Identities = 65/478 (13%), Positives = 138/478 (28%), Gaps = 83/478 (17%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M + +F+ GE+ P LL++R D++ + + ++RN+I G + P
Sbjct: 1 MSRAVSIQSNFTTGEVDP-LLRARIDINQYYNALEQARNVIVQPQGGIERRPG------- 52
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
F V ++ + L + T
Sbjct: 53 ---------LQFIFE----------------VPSAANPQNGMKLVPFEFST--------- 78
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL 180
+FVH + F + + + +
Sbjct: 79 ---TQS-YMLLFVH---------------NRMYIFKDKELVTN----INSSGNDYLTTTI 115
Query: 181 SISQADTSTARITSDMKIFKPLDKG--RSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRS 238
+ + T ++D I D + +R H + ++ + +S
Sbjct: 116 TSTVLATMDHTQSADTLIVVQEDMAPKKIVRGAAHNTWTISDISFEF----IPKFNFTQS 171
Query: 239 LTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKD 298
TT G + + + E+ G + + S +
Sbjct: 172 ETTINQTITPSAVDGNITITAGG---NVFASGNLNQYIEANDGMGR-ARITRFVSATSVE 227
Query: 299 GRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLS 358
+ + G + + +W +GYP TFH RL F G K +++ S
Sbjct: 228 AIVEIPFFNTTAIASGGTFIDGGYEDSWSGSKGYPRTATFHEGRLYFGGVKSRPNTIFAS 287
Query: 359 SFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWL--LSI 416
F+DF+ G ++ ++ S + I M + + +L ++
Sbjct: 288 RVARFFDFNP----GEALDDDSIELTISTDSTNAITGMFSGRDLQIFTKGGEFFLPQSTL 343
Query: 417 SLSKGLSIDFRRVSGSGV-YACPPVSVGDCLVFVCGVGRRIKY-ISGSTEQGFRFNEI 472
++ + G PV +F+ G+ ++ + E + N I
Sbjct: 344 DPITPTNVVVNGATRRGSQEGIKPVGAESGTLFIQRAGKSLREFLFSDVELSYISNNI 401
>gi|296532340|ref|ZP_06895077.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296267336|gb|EFH13224.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 626
Score = 147 bits (370), Expect = 5e-33, Method: Composition-based stats.
Identities = 64/363 (17%), Positives = 123/363 (33%), Gaps = 45/363 (12%)
Query: 218 AKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRE 277
+ NT++SI + + YR + G + S T L S+ +
Sbjct: 133 SSNTSWSIAPWSFVREPFYRFASPGVTLAPSATSGSVT------------LTASAAAFQP 180
Query: 278 SASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVT 337
+G + + G V+ + S + + W +A+ G+P
Sbjct: 181 GHAGVR--FRLGGKRVLVTAVASATSATASVEETLPGTAASADWDEAAFSAVRGWPVTAC 238
Query: 338 FHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMH 397
FH +RL+ GS+ ++LS G ++F + G +A+ + + I
Sbjct: 239 FHQDRLVLGGSRDLPNRLWLSRSGDLFNF----DLGSGLDDQAIEFGLLSDQVNAIR-AV 293
Query: 398 PFGEGVLVGCDTSLWLLSISLSKGLSIDFRRVSGSGV---YACPPVSVGDCLVFVCGVGR 454
G + V + W+++ SI R + G PPV V +FV G+
Sbjct: 294 FSGRHLQVFTSGAEWMVTGEPMTPASIQLHRQTRIGSPVARIIPPVDVDGSTIFVARSGQ 353
Query: 455 RIKYISG-STEQGFRFNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLG 513
+ + +Q ++ N++ +A HL + + Y + ++ V ++ L
Sbjct: 354 AVHEYAYTDVQQAYQANDLALVARHLVQTPV-SMAYDQT-RRLLHVAMQGGW-----LAT 406
Query: 514 CRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVALSAGEERSFTVRLNL 573
E AW L+ ++W V + +RL
Sbjct: 407 LTLYR-AEQVTAWTRQDTDGAFRALA--------EIDGTVWCAVERAGA------MRLER 451
Query: 574 LDD 576
DD
Sbjct: 452 FDD 454
Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 76/211 (36%), Gaps = 21/211 (9%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M TK SF+AGEL +LL R DL + G + RN+ G L P ++ +
Sbjct: 1 MAAGRSTKTSFTAGELGDQLL-GRGDLRAYENGARRLRNVFIQPTGGLTRRPGLRHVAEL 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
P R+ +F L+V + L++ + + P+T +
Sbjct: 60 ---PGPARLIAFEFNTEQTYLVVLTHQGLRVFLGDVQVA--------SLAGPWTAAMLDA 108
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL 180
+ + T + +H D P + S++ F+ P+ S
Sbjct: 109 IAWTQSADTLLLLHPDMVPQRVTRSS---NTSWSIAPWSFVREPFYRFA------SPGVT 159
Query: 181 SISQADTSTARITSDMKIFKPLDKGRSIRLG 211
A + + +T+ F+P G RLG
Sbjct: 160 LAPSATSGSVTLTASAAAFQPGHAGVRFRLG 190
>gi|307946248|ref|ZP_07661583.1| hypothetical protein TRICHSKD4_4953 [Roseibium sp. TrichSKD4]
gi|307769912|gb|EFO29138.1| hypothetical protein TRICHSKD4_4953 [Roseibium sp. TrichSKD4]
Length = 681
Score = 146 bits (369), Expect = 8e-33, Method: Composition-based stats.
Identities = 104/585 (17%), Positives = 173/585 (29%), Gaps = 82/585 (14%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
+ + +F+AGEL P LL R L + G N++ + G + +
Sbjct: 2 VARPGRLQSAFTAGELDP-LLHERSQLKYFSTGADHMENVVSIPQGGFGLRGGLLDIGAV 60
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTP-YTFKDNK 119
P ++R+F F DG LVF K++ W + + P +
Sbjct: 61 D--PAASRLFDFKASDGSAYDLVFAPGKME--------AWGNSGKLQDLAIPALSETMLP 110
Query: 120 SLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAK 179
L A T + +H D P + + +++ D + P G
Sbjct: 111 GLNDAQQRDTMILLHADLQPQRIKHAGPQ---AWSADAVPLTGLPSYDYGA--------- 158
Query: 180 LSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSL 239
+ S + R+ F LD L E SIG R
Sbjct: 159 -TYSNGVAAVWRLE-----FVGLDANSIFTLTISQEE-----TVSIGYTTAMGTLASRVR 207
Query: 240 TTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESA-SGAVAPYYVWGDIKDVSKD 298
T D + G + + + A SG V + +
Sbjct: 208 TA--VQDLPNVAPGISVASAGGSKIAVTFSGENNAGDGWAVSGNVINKADAAILAAKT-- 263
Query: 299 GRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLS 358
++ VAP + G+P F+N RLL G KG + S
Sbjct: 264 --TVGVAPGEPVI---------------SSVRGWPRCGAFYNQRLLLGGFKGLPNAWMFS 306
Query: 359 SFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISL 418
G +++F D + + + V + + P + W+ L
Sbjct: 307 LQGDYFNF--DERFSAANGPALIPMDVDGGEV--VEQIVPSRNLAIFTNGAEYWIAERGL 362
Query: 419 SKGLSIDFRRVSGSGVYACPPVSVGDCLV-FVCGVGRRIKYISG-STEQGFRFNEITQLA 476
S+ + + GV P+ + + FV G I E F +I+ L
Sbjct: 363 SRTEPPNHVQAGERGVKNGVPIVANEGALNFVSSTGSVIGEFRYTDVEGNFVSRDISLLG 422
Query: 477 DHLFNQRILQLVYQEEPHSIV----WVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMIS 532
HL + + S +VLE LL + A+
Sbjct: 423 SHLIID-VKDQAMRRAEKSTSGNLNGIVLEDGQARLATLL------REQDVTAFSRMTSD 475
Query: 533 DKHY-VLSAASFPNDNRGGTSLWMLVALSAGEERSFTVRLNLLDD 576
H+ +S G + +V AG V LLD+
Sbjct: 476 SGHFKAVSV-------NGRNEMSWIVDRPAGRRLERLVTGYLLDE 513
>gi|83313369|ref|YP_423633.1| hypothetical protein amb4270 [Magnetospirillum magneticum AMB-1]
gi|82948210|dbj|BAE53074.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
Length = 634
Score = 146 bits (367), Expect = 1e-32, Method: Composition-based stats.
Identities = 41/206 (19%), Positives = 73/206 (35%), Gaps = 15/206 (7%)
Query: 6 WTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPR 65
+TK SF+AGE+ L R DL+L+A G RN++ G + P ++ R
Sbjct: 7 FTKTSFTAGEVDVDL-AGRGDLALYANGAKSLRNVVVAPIGGVRRRPGLRHVAPAR---G 62
Query: 66 SNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAV 125
R+ +F LL D ++ I ++ +TP++ L +
Sbjct: 63 PGRLIAFEFNTEQTYLLALSDHRMDI--------YADGAKVAELETPWSTAQVAQLSWTQ 114
Query: 126 FGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQA 185
T + VH D P + S+ + + + +A
Sbjct: 115 SADTLLVVHPDVEPRKITRTGAN---SWVLETWSYYQEDGILYVPTHKFAKDAVTLTPSG 171
Query: 186 DTSTARITSDMKIFKPLDKGRSIRLG 211
+ T +T+ +F G R+G
Sbjct: 172 TSGTITLTASEAVFDAAHAGCRFRVG 197
Score = 133 bits (334), Expect = 8e-29, Method: Composition-based stats.
Identities = 65/380 (17%), Positives = 123/380 (32%), Gaps = 49/380 (12%)
Query: 217 WAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSR 276
W ++ + + +V D R +T R+G + +Y +++ I ++ +
Sbjct: 112 WTQSADTLL---VVHPDVEPRKIT--RTGANSWVLETWSYYQEDGILYVPTHKFAKDAVT 166
Query: 277 ESASGAVAP------------------YYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSV 318
+ SG + V G +S + + + +
Sbjct: 167 LTPSGTSGTITLTASEAVFDAAHAGCRFRVGGKQVLISAVTSATQAQAEVKQTLGGTAAT 226
Query: 319 VSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPT 378
W ++ G+P V FH RL GS+G ++LS ++F + G
Sbjct: 227 EDWEEQSFSPLRGWPVSVCFHQGRLAIGGSRGLPNRLWLSKSMDLFNF----DLGTGLDD 282
Query: 379 KALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGLSIDFRRVSGSGV---Y 435
+A+ ++ I G + V + W++ S I R + G
Sbjct: 283 EAIEFSLLSTQVDAIR-AVFSGRHLQVFTSGAEWMVVGSPLTPTKIQLNRQTRVGSPVDR 341
Query: 436 ACPPVSVGDCLVFVCGVGRRIKY-ISGSTEQGFRFNEITQLADHLFNQRILQLVYQEEPH 494
+ PP V FV GR ++ + +Q ++ N+++ +A H+ N + Y
Sbjct: 342 SVPPRDVDGATHFVSRSGRDLREFLFADVDQAYQANDLSMVAKHVMNTPV-DQDYDAS-R 399
Query: 495 SIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLW 554
+ VV+ + + E AW S A D
Sbjct: 400 RLFHVVM-----ADGLMATLTVYR-AEKVTAWTVFETQGAF--RSVAVVDGDTH------ 445
Query: 555 MLVALSAGEE-RSFTVRLNL 573
+LV F LNL
Sbjct: 446 VLVERGGSHVIECFDDTLNL 465
>gi|209966375|ref|YP_002299290.1| hypothetical protein RC1_3113 [Rhodospirillum centenum SW]
gi|209959841|gb|ACJ00478.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 638
Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 71/215 (33%), Gaps = 14/215 (6%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M K +F+ GELSP LL R DL + G RN++ L G + P
Sbjct: 1 MTRLRSVKAAFTGGELSPDLL-GRGDLRSYETGALALRNVLILPTGGVTRRPGTAYLATL 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
P R+ +F+ LL F D++L++ +TP+T
Sbjct: 60 ---PGPGRLAAFAFDTEQAYLLAFTDRRLEVF--------RDGATEAVLETPWTAGQLAQ 108
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKI--SFTFDEIKFLPPPWLGDGMISGVKSNA 178
L + + H D PP ++ D ++ F +K L A
Sbjct: 109 LAWTQSADVLLVCHPDVPPRRIVRSGDRRWRCEAWRFSTVKTADGRALQRLPFHRFADAA 168
Query: 179 KLSISQADTSTARITSDMKIFKPLDKGRSIRLGCH 213
R+ + +F GR RL
Sbjct: 169 VTLTPSGTRGRVRVRASAPVFDGAHAGRPFRLRRR 203
Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats.
Identities = 41/252 (16%), Positives = 79/252 (31%), Gaps = 23/252 (9%)
Query: 312 FQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGE 371
+ W A+ G+P FH +RL+ GS+ ++LS G +DF
Sbjct: 224 VPDAEPSIDWDEPAFSPLRGWPVSACFHQDRLVIGGSRDLPNRLWLSRSGDLFDFDP--- 280
Query: 372 YGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGLSIDFRRVSG 431
G + +A+ A+ + I + G + V + W ++ + R S
Sbjct: 281 -GEGEDDEAIEFAILSDQVNAIRQVFS-GRHLQVFTTGAEWAVTGEPLTPKEVRLDRQSR 338
Query: 432 SGVY---ACPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQLADHLFNQRILQLV 488
G P V +F G +++ E + ++T A HL +
Sbjct: 339 VGSGPGRQIPAREVDGATLFAGRDGAVREFLWTDLESSYSTTDLTLAAGHLCRAPVE--- 395
Query: 489 YQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNR 548
+P + + ++ + + E W V S A +
Sbjct: 396 LDVDPGRRLLLAVQ----ADGGVAALTLDR-AEQVTGWTRLETDGA--VRSLAVVRGEVH 448
Query: 549 GGTSLWMLVALS 560
W++
Sbjct: 449 -----WLVERQG 455
>gi|291336926|gb|ADD96454.1| hypothetical protein [uncultured organism MedDCM-OCT-S09-C787]
Length = 158
Score = 144 bits (362), Expect = 5e-32, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 63/141 (44%), Gaps = 6/141 (4%)
Query: 369 DGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLS----KGLSI 424
D +G ++ + + I +M +++G + +S + +I
Sbjct: 3 DNYHGTVADDDSIIYTIASNQVNAIRFMTAT-RTLIIGTAGGEFAVSGGGTDIAITPTNI 61
Query: 425 DFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEITQLADHLFNQR 483
++ S +G ++VG+ +F+ R+++ ++ + + G+ ++T LA+H+
Sbjct: 62 LIKKQSNNGAANVDALAVGNATLFLQRARRKLRELAYNFDVDGYVAPDLTILAEHISEGG 121
Query: 484 ILQLVYQEEPHSIVWVVLEPK 504
QL YQ+EP+ ++W V
Sbjct: 122 FKQLSYQQEPNQVIWGVRNDG 142
>gi|144898783|emb|CAM75647.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense
MSR-1]
Length = 635
Score = 144 bits (362), Expect = 5e-32, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 74/211 (35%), Gaps = 15/211 (7%)
Query: 3 NTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRL 62
N T K +F+AGELS +L R DL+ + G + RN+ G + P ++ +
Sbjct: 5 NITLAKTNFTAGELSLDML-GRGDLAAYGNGAKRLRNVFIAPIGGVSRRPGLR---HVDI 60
Query: 63 DPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLE 122
R+ +F LLV D L I ++ + TP+T + +
Sbjct: 61 ARGKGRLIAFEFNTEQTYLLVLTDLHLDI--------YADGVAVAHVDTPWTEAQLQQIN 112
Query: 123 YAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSI 182
+ T + VH + P L ++T F + ++
Sbjct: 113 WTQTADTLLIVHPEVAPRKLTRTAHS---AWTISNWMFHEADGVLFQPYHKFAADEVTLQ 169
Query: 183 SQADTSTARITSDMKIFKPLDKGRSIRLGCH 213
A + + +T+ F G +RL
Sbjct: 170 PSATSGSITLTASAAFFVAGHVGTRLRLQQK 200
Score = 143 bits (359), Expect = 1e-31, Method: Composition-based stats.
Identities = 49/286 (17%), Positives = 99/286 (34%), Gaps = 26/286 (9%)
Query: 293 KDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDE 352
+++ + + + + W A G+P V FH +RL+ GS+
Sbjct: 202 VEITAIASATQASATVKQNLVNTSAHKDWEEQALSAVRGWPVSVCFHQDRLVIGGSRDQP 261
Query: 353 LSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLW 412
++LS ++F + G +A+ A+ + I + G + V + W
Sbjct: 262 NRLWLSKSSDLFNF----DLGEALDDEAIEFALLSDQVNAIRHVFS-GRHLQVFTSGAEW 316
Query: 413 LLSISLSKGLSIDFRRVSGSGV---YACPPVSVGDCLVFVCGVGRRIKY-ISGSTEQGFR 468
++S SI R + G PP V +FV G+ ++ + EQ ++
Sbjct: 317 MVSGQPLTPSSIQLTRQTRVGSPIDRTVPPRDVDGATLFVSRNGKDLREFLFADVEQAYQ 376
Query: 469 FNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHT 528
++ LA H+ + Y + ++ V+ L E AW
Sbjct: 377 SGDLAMLAKHVMLAPV-DQDY--DAGRRLFHVVM----GDGGLATVTVYR-SEKVTAWTG 428
Query: 529 HMISDKHYVLSAASFPNDNRGGTSLWMLVALSAGEE-RSFTVRLNL 573
H+ + + ++ +++LV F L+L
Sbjct: 429 HVTAGRFLAVAVV--------EGEVYVLVEREGIVSVECFDESLSL 466
>gi|288959323|ref|YP_003449664.1| hypothetical protein AZL_024820 [Azospirillum sp. B510]
gi|288911631|dbj|BAI73120.1| hypothetical protein AZL_024820 [Azospirillum sp. B510]
Length = 632
Score = 138 bits (346), Expect = 3e-30, Method: Composition-based stats.
Identities = 59/325 (18%), Positives = 104/325 (32%), Gaps = 42/325 (12%)
Query: 270 LSSKTSRESASGAVAPYYVWGDIKDVSKDGR----------------SISVAPQSQTLFQ 313
+ T S +G + D +DG + V +
Sbjct: 162 DPAVTVTPSGTGGAITVTASAPVFDPRQDGTRLRIRGKQLLVTGVVSATQVNATVKETLA 221
Query: 314 AGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYG 373
W A+ G+P FH +RL+ GS+ ++LS ++F + G
Sbjct: 222 DTQPTPQWEEQAFSALRGWPVSAAFHQDRLVIGGSRDLPNRLWLSRSAQIWNF----DLG 277
Query: 374 CYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGLSIDFRRVSGSG 433
+A+ + + + G + V + ++++ S+ +R + G
Sbjct: 278 EGLDDQAIEFGILSDQVNAVR-AVFSGRHLQVFTSGAEYMVTGDPLTPQSMQVKRQTRIG 336
Query: 434 V---YACPPVSVGDCLVFVCGVGRRIKY-ISGSTEQGFRFNEITQLADHLFNQRILQLVY 489
A PP V +FV R I+ + TE ++ N++ LA HL Y
Sbjct: 337 SPMDRAIPPRDVEGATLFVPRNRREIREFLFTDTEAAYQANDLALLARHLVASP-RDQDY 395
Query: 490 QEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRG 549
+ +++V +E L E AW V S A+
Sbjct: 396 DQN-RRLLFVAMEDG-----TLGALTAYR-AEDVTAWTLLETDGA--VRSVAAV------ 440
Query: 550 GTSLWMLV-ALSAGEERSFTVRLNL 573
G ++ LV F LNL
Sbjct: 441 GDEVYALVERRGFWTIERFDDGLNL 465
Score = 136 bits (342), Expect = 9e-30, Method: Composition-based stats.
Identities = 46/211 (21%), Positives = 69/211 (32%), Gaps = 15/211 (7%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M K +F+AGE+S RLL R DL + G RNL G + +
Sbjct: 2 MGRLHQVKTNFTAGEVSRRLL-GRGDLKAYDNGALALRNLFIDPTGGVTRRSGLAF---T 57
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
L P R+ +F LLVF D+++ + + P+T
Sbjct: 58 ALAPGDGRLVAFERNSEQTYLLVFTDRRIDVF--------QGGSRLASVAAPWTLTQLAQ 109
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKL 180
+ + T + H D PP L GD + E F L A
Sbjct: 110 ITWTQSADTLLVCHPDLPPRKLTR---GDDGGWALAEWAFAVEGGLVRTPFHRFGDPAVT 166
Query: 181 SISQADTSTARITSDMKIFKPLDKGRSIRLG 211
+T+ +F P G +R+
Sbjct: 167 VTPSGTGGAITVTASAPVFDPRQDGTRLRIR 197
>gi|291334718|gb|ADD94364.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C890]
Length = 135
Score = 137 bits (344), Expect = 5e-30, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Query: 447 VFVCGVGRRIKYISGSTE-QGFRFNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKD 505
+F+ R+++ ++ + + G+ ++T LA+H+ QL YQ+EP+ ++W V
Sbjct: 1 MFLQRARRKLRELAYNFDVDGYVAPDLTILAEHISEGGFKQLSYQQEPNQVIWGVRNDG- 59
Query: 506 NSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVALS-AGEE 564
+L+G + E + AWH H+ S A+ P D+ W++ + G
Sbjct: 60 ----QLVGLTYQRE-QQVVAWHRHIFGGSAVCESVATIPTDDS-EYQTWVINKRTINGST 113
Query: 565 RSFTV 569
+ +
Sbjct: 114 KRYVE 118
>gi|291334514|gb|ADD94167.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1201]
gi|291336446|gb|ADD96001.1| hypothetical protein [uncultured organism MedDCM-OCT-S04-C1073]
Length = 153
Score = 136 bits (343), Expect = 7e-30, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Query: 447 VFVCGVGRRIKYISGSTE-QGFRFNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKD 505
+F+ R+++ ++ + + G+ ++T LA+H+ QL YQ+EP+ ++W V
Sbjct: 1 MFLQRARRKLRELAYNFDVDGYVAPDLTILAEHISEGGFKQLSYQQEPNQVIWGVRNDG- 59
Query: 506 NSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVALS-AGEE 564
+L+G + E + AWH H+ S A+ P D+ W++ + G
Sbjct: 60 ----QLVGLTYQRE-QQVVAWHRHIFGGSAVCESVATIPTDDS-EYQTWVINKRTINGST 113
Query: 565 RSFTV 569
+ +
Sbjct: 114 KRYVE 118
>gi|83721618|ref|YP_441474.1| gp12 [Burkholderia thailandensis E264]
gi|257139844|ref|ZP_05588106.1| gp12, putative [Burkholderia thailandensis E264]
gi|83655443|gb|ABC39506.1| gp12, putative [Burkholderia thailandensis E264]
Length = 188
Score = 136 bits (342), Expect = 1e-29, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 44/134 (32%), Gaps = 4/134 (2%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M T + + +AGELSP L + DL +A GV N IP G ++
Sbjct: 1 MAKITTIQSNLNAGELSPPL-EGHIDLDRYANGVKTMLNAIPQIEGGARRRFGFRQVAAT 59
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
+ + R+ F + GD + + TP++
Sbjct: 60 K-TTGATRLVPFVFSKSQAYFVELGDAYARFYTDSGQ--IQQSGVPIELATPWSASQLFE 116
Query: 121 LEYAVFGSTAVFVH 134
LEY T H
Sbjct: 117 LEYTQNSDTMFIAH 130
>gi|77734533|emb|CAI59394.2| hypothetical protein pSG3.03 [Sodalis glossinidius]
Length = 517
Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 13/122 (10%)
Query: 453 GRRIKYISGSTE-QGFRFNEITQLADHLFNQ-RILQLVYQEEPHSIVWVVLEPKDNSFPR 510
++ ++ S + GF+ N++T LA+H F ++L + P S+VW V
Sbjct: 188 RSAVRDLAYSFDVDGFQGNDLTVLANHFFTGFQLLDWAFTITPLSVVWCVRNDG-----T 242
Query: 511 LLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVALS-AGEERSFTV 569
LLG + E + AWH H + K+ + S +L+ +V + G+ R +
Sbjct: 243 LLGLTYLRE-QQVAAWHQHPAAGKY--EAVCSI--SEGTEDALYCVVNRTIQGQPRRYVE 297
Query: 570 RL 571
RL
Sbjct: 298 RL 299
>gi|89886023|ref|YP_516220.1| hypothetical protein SGPHI_0042 [Sodalis phage phiSG1]
gi|89191758|dbj|BAE80505.1| conserved hypothetical protein [Sodalis phage phiSG1]
gi|125470053|gb|ABN42245.1| gp40 [Sodalis phage phiSG1]
Length = 517
Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 13/122 (10%)
Query: 453 GRRIKYISGSTE-QGFRFNEITQLADHLFNQ-RILQLVYQEEPHSIVWVVLEPKDNSFPR 510
++ ++ S + GF+ N++T LA+H F ++L + P S+VW V
Sbjct: 188 RSAVRDLAYSFDVDGFQGNDLTVLANHFFTGFQLLDWAFTITPLSVVWCVRNDG-----T 242
Query: 511 LLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVALS-AGEERSFTV 569
LLG + E + AWH H + K+ + S +L+ +V + G+ R +
Sbjct: 243 LLGLTYLRE-QQVAAWHQHPAAGKY--EAVCSI--SEGTEDALYCVVNRTIQGQPRRYVE 297
Query: 570 RL 571
RL
Sbjct: 298 RL 299
>gi|48696643|ref|YP_024422.1| hypothetical protein VP2p15 [Vibrio phage VP2]
gi|40950041|gb|AAR97632.1| hypothetical protein [Vibrio phage VP2]
Length = 594
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 64/346 (18%), Positives = 116/346 (33%), Gaps = 42/346 (12%)
Query: 247 RFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAP 306
G + A +V D V+ + R + Y GD + GR I V P
Sbjct: 80 EVGNTNIAVWVNDV----RQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHP 135
Query: 307 QSQTLFQAGVSVVSWFM---------SAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYL 357
Q + +W + W YP V NR+ + GS +
Sbjct: 136 ALQPKRLYRDNNNAWQFVNMHTGAVPAEWSPSN-YPQTVGIFQNRVWYVGSPVHRTYFWA 194
Query: 358 SSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSIS 417
+ G D + DP + W+ + + +G + + L+ S
Sbjct: 195 TRAGKLEDIAPSTANNPNDPISFVGIMEGTPC-----WIIASSDVLTIGTTINDYQLAAS 249
Query: 418 LS---KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEIT 473
+ RR S G A + + ++F ++ ++ E + +E++
Sbjct: 250 TGVSVTAATAILRRSSVQGTAAVQGIPAEEQVIFCSRNKSKVYAMNYVREQDNWIPDEMS 309
Query: 474 QLADHLFN-------QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAW 526
A HLF + ++ Y + +WVVLE ++ C F + AW
Sbjct: 310 SQAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLE-----NGQINYCCFDRTTDTK-AW 363
Query: 527 HTHMISDKHYVLSAASFPNDNRGGTSLWMLVALS---AGEERSFTV 569
+S + AA+F D ++ V S G ++++TV
Sbjct: 364 TQLELSGGKVIDIAAAFNPD---SDYAYVAVVRSKAINGVQKNYTV 406
Score = 56.8 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 48/329 (14%), Positives = 91/329 (27%), Gaps = 30/329 (9%)
Query: 4 TTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLD 63
+++ SF G ++PRL + + + + + + N + G L++ +E C+
Sbjct: 2 ADFSQTSFKGGVIAPRLQFNEYESA-YHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDG 60
Query: 64 PRSNRVFSFSIPDGGYALLVFGDKKLQIVVVR-----SSTKWSPALFGKTYKTPYTFKDN 118
++ G+ + + V ++T +T Y
Sbjct: 61 EVRLFRLPAVDAPSNDVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAY--DTI 118
Query: 119 KSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKS-- 176
A + VH P L + + F +P W V
Sbjct: 119 GDDAGAANTGRLIMVHPALQPKRLYR-DNNNAWQFVNMHTGAVPAEWSPSNYPQTVGIFQ 177
Query: 177 -------NAKLSISQADTSTARI--TSDMKIFKPLDKGRSIRLGCHPPEWAKNTN----- 222
+ T ++ + P D + + P W ++
Sbjct: 178 NRVWYVGSPVHRTYFWATRAGKLEDIAPSTANNPNDPISFVGIMEGTPCWIIASSDVLTI 237
Query: 223 -YSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASG 281
+I Y +A S+T + R +G V V+ S S+ A
Sbjct: 238 GTTINDYQLAAS-TGVSVTAATAILRRSSVQGTAAV-QGIPAEEQVIFCSRNKSKVYAMN 295
Query: 282 AVAPYYVWGDIKDVSKDGRSISVAPQSQT 310
V W I D P S
Sbjct: 296 YVREQDNW--IPDEMSSQAQHLFTPISSA 322
>gi|259419134|ref|ZP_05743051.1| hypothetical protein SCH4B_4402 [Silicibacter sp. TrichCH4B]
gi|259345356|gb|EEW57210.1| hypothetical protein SCH4B_4402 [Silicibacter sp. TrichCH4B]
Length = 715
Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats.
Identities = 96/531 (18%), Positives = 169/531 (31%), Gaps = 53/531 (9%)
Query: 3 NTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRL 62
T + FS G++ P Q R D+ L A+ V + N + L G + M+
Sbjct: 5 KETIWQKDFSLGQVRPE-AQERDDIDLVARSVKEGLNCVVLSTGQMEGRSGMRFLNATAS 63
Query: 63 DPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLE 122
+ +G L F L + ++ +++ + + +
Sbjct: 64 SQGREV----DLGEGRVFDLHFVPSGLILYDSNNTVEYTGNITWTAAPKKWGIYTFDEIS 119
Query: 123 YAVFGS----TAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNA 178
+ V + + + P L+ +DG S++F E+ F G S + N
Sbjct: 120 FWVVADPDSSSILIGSQHFPIQALILNEDG---SWSFGEMAFATG-LAGAIHQSYWRYNE 175
Query: 179 KLSI-SQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYR 237
+SI A T +T+ I+ +G +IR +N +G + +
Sbjct: 176 TVSIQPSARTGAITVTASEAIWTADHEGMAIR--------YQNREIILGTLVSS----TV 223
Query: 238 SLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESA-SGAVAPYYVWGDIKDVS 296
Y + V + + ++ + +G+V
Sbjct: 224 INAAVTEELPPTYDITVSSVSNYQVGEAVEHSVLGGQGIITGIAGSVITVMATSRYDGFD 283
Query: 297 KDGRSISVAPQSQTLFQAGVSVVS------WFMSAWGEQEGYPSHVTFHNNRLLFSGSKG 350
VAP + A + + W M GY + H +R+ G
Sbjct: 284 TVASPKLVAPNAAQPISAVAAAATPAATVIWEMQMQSPVHGYAGYAVRHLSRVFLCDFPG 343
Query: 351 DELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDT- 409
+ S GA DF + E V S T+ +M + + +
Sbjct: 344 APQAFAASVVGAINDFKMGSE-----DADGFVDTVGADSGGTLRFMASVEDLLFLTSKGI 398
Query: 410 -SLWLLSISLSKGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKY--ISGSTEQG 466
S S +I R S G + P++V D VFV VG+RI ++G
Sbjct: 399 YSHQTRDGSAITPATIRPVRFSRVGCASVEPIAVDDGCVFVDAVGQRIYAATLAGDIYTK 458
Query: 467 FRFNEITQLADHLFNQRILQLVY-------QEEPHSIVWVVLEPKDNSFPR 510
+R +T L L I VY E S V+VV + +
Sbjct: 459 WRAEPMTSLHPQL----IKDAVYLGATSSGSENAESFVYVVNSDGSVALGQ 505
>gi|325971691|ref|YP_004247882.1| hypothetical protein SpiBuddy_1864 [Spirochaeta sp. Buddy]
gi|324026929|gb|ADY13688.1| hypothetical protein SpiBuddy_1864 [Spirochaeta sp. Buddy]
Length = 551
Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/275 (16%), Positives = 87/275 (31%), Gaps = 60/275 (21%)
Query: 332 YPSHVTFHNNRLLFSGSKGDELSVYLSSF--------GAFYDFSL--------------- 368
YPS V NRL FS + + ++S F F +
Sbjct: 166 YPSVVGICQNRLWFSAAILKPYTTWVSRPPYDGSNNHHDFTTFDVIEVNTEVIKDPSTWP 225
Query: 369 -------DGEYGCYDPTK----------------ALTTAVTDFSASTIHWMHPFGEGVLV 405
D D +K A+ + TI W + + +
Sbjct: 226 KTTNEQGDEMIDFSDSSKFVETVKEIEEVINAKCAMEIELASGRNDTIKW-VAGMDNIFI 284
Query: 406 GCDTSLWLLSISLSKGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTEQ 465
G + + W+ + +S G P ++ D + F+ G R++ ++ ++
Sbjct: 285 GTEANEWMCPFDID-PTKQSASMLSSYGSLPIQPQTLHDGIFFLQR-GNRLREMT-RSQN 341
Query: 466 GFRFNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFA 525
G N+++ ADH+ I QL + P +++ +L L + G
Sbjct: 342 GSISNDLSFTADHILFAGIRQLATLKNPDPMIFCLLNDG-----TLAVLCYDKNY-GMQG 395
Query: 526 WHTHMISDKHYVLSAASFPNDNRGGTSLWMLVALS 560
W + L+ P ++ G ++ V
Sbjct: 396 WSRWSTQGEFMCLA----PYEDEDGQKMFAHVRRG 426
Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats.
Identities = 59/375 (15%), Positives = 122/375 (32%), Gaps = 39/375 (10%)
Query: 9 HSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNR 68
+++ GE+SP+L R DL ++ QG ++ + G + P ++ R
Sbjct: 6 NNWMYGEISPKL-GGRLDLEMNTQGCEILKDFRNMLQGGITRRPPLKHVAQTV----RGR 60
Query: 69 VFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGK---TYKTPYTFKDNKSLEYAV 125
F++ G L+ +KKL++ ++ T Y D S++YA
Sbjct: 61 TIPFTLSSGESFLVELSNKKLRVWRKGVLGFYTVTFLPSGNDYLPTDYLEADVWSIQYAQ 120
Query: 126 FGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQA 185
+ VHKD+ PH ++Y + F P+ + +
Sbjct: 121 YYDRLYLVHKDYQPHVVVYAAEA-----------FQFSPFTAETDAGKQLGKSTGYYPSV 169
Query: 186 DT-STARITSDMKIFKPLD--KGRSIRLGCHPPEWAKNTNY-SIGAYIVADDKVYRSLTT 241
R+ I KP R G + + + ++ D + T
Sbjct: 170 VGICQNRLWFSAAILKPYTTWVSRPPYDGSNNHHDFTTFDVIEVNTEVIKDPSTWPKTTN 229
Query: 242 GRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRS 301
+ + +S + +V+ + + ++ +V G +
Sbjct: 230 EQGDEMIDFSDSSKFVETVKEIEEVINAKCAMEIELASGRNDTIKWVAGMDNIFIGTEAN 289
Query: 302 ISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSH---VTFHNNRLLFSGSKGDELSVYLS 358
+ P + S+ +S++G P F R G++ E++ S
Sbjct: 290 EWMCPFDIDPTKQSASM----LSSYGSLPIQPQTLHDGIFFLQR----GNRLREMT--RS 339
Query: 359 SFGAFYD---FSLDG 370
G+ + F+ D
Sbjct: 340 QNGSISNDLSFTADH 354
>gi|50282960|ref|YP_053016.1| hypothetical protein VP5_gp14 [Vibrio phage VP5]
Length = 594
Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats.
Identities = 64/346 (18%), Positives = 116/346 (33%), Gaps = 42/346 (12%)
Query: 247 RFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAP 306
G + A +V D V+ + R + Y GD + GR I V P
Sbjct: 80 EVGNANIAVWVNDV----RQVVAATPSEWRNTLDRIQTAYDTIGDDLGAANTGRLIMVHP 135
Query: 307 QSQTLFQAGVSVVSWFM---------SAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYL 357
Q + +W + W YP V NR+ + GS +
Sbjct: 136 ALQPKRLYRDNNNAWKFVNMHTGAVPAEWSSSN-YPQTVGIFQNRVWYVGSPVHRTYFWA 194
Query: 358 SSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSIS 417
+ G D + DP + W+ + + +G + + L+ S
Sbjct: 195 TRAGKLEDIAPSTANNPNDPISFVGIMEGTPC-----WIIASSDVLTIGTTINDYQLAAS 249
Query: 418 LS---KGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTE-QGFRFNEIT 473
+ RR S G A + + ++F ++ ++ E + +E++
Sbjct: 250 TGVSVTAATAILRRSSVQGTAAVQGIPAEEQVIFCSRNKSKVYAMNYVREQDNWIPDEMS 309
Query: 474 QLADHLFN-------QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAW 526
A HLF + ++ Y + +WVVLE ++ C F + AW
Sbjct: 310 SQAQHLFTPISSARGASVRRVAYISDAAKSLWVVLE-----NGKINYCCFDRTTDTK-AW 363
Query: 527 HTHMISDKHYVLSAASFPNDNRGGTSLWMLVALS---AGEERSFTV 569
+S + AA+F D ++ V S G ++++TV
Sbjct: 364 TQLELSGGKVIDIAAAFNPD---SDYAYVAVVRSKVVNGAQKNYTV 406
Score = 56.4 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/329 (15%), Positives = 93/329 (28%), Gaps = 30/329 (9%)
Query: 4 TTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLD 63
+++ SF G ++PRL + + + + + + N + G L++ +E C+
Sbjct: 2 ADFSQTSFKGGVIAPRLQFNEYESA-YHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDG 60
Query: 64 PRSNRVFSFSIPDGGYALLVFGDKKLQIVVVR-----SSTKWSPALFGKTYKTPYTFKDN 118
++ G+ + + V ++T +T Y
Sbjct: 61 EVRLFRLPAIDAPSNDIIVEVGNANIAVWVNDVRQVVAATPSEWRNTLDRIQTAY-DTIG 119
Query: 119 KSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKS-- 176
L A G + VH P L + + F +P W V
Sbjct: 120 DDLGAANTG-RLIMVHPALQPKRLYR-DNNNAWKFVNMHTGAVPAEWSSSNYPQTVGIFQ 177
Query: 177 -------NAKLSISQADTSTARI--TSDMKIFKPLDKGRSIRLGCHPPEWAKNTN----- 222
+ T ++ + P D + + P W ++
Sbjct: 178 NRVWYVGSPVHRTYFWATRAGKLEDIAPSTANNPNDPISFVGIMEGTPCWIIASSDVLTI 237
Query: 223 -YSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASG 281
+I Y +A S+T + R +G V V+ S S+ A
Sbjct: 238 GTTINDYQLAAS-TGVSVTAATAILRRSSVQGTAAV-QGIPAEEQVIFCSRNKSKVYAMN 295
Query: 282 AVAPYYVWGDIKDVSKDGRSISVAPQSQT 310
V W I D P S
Sbjct: 296 YVREQDNW--IPDEMSSQAQHLFTPISSA 322
>gi|291334273|gb|ADD93936.1| hypothetical protein [uncultured marine bacterium
MedDCM-OCT-S08-C235]
Length = 229
Score = 101 bits (250), Expect = 5e-19, Method: Composition-based stats.
Identities = 34/206 (16%), Positives = 66/206 (32%), Gaps = 14/206 (6%)
Query: 7 TKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRS 66
K +F +GEL P L+ R D + +A G K +N+ G + Y P +
Sbjct: 11 LKTTFQSGELDP-LMNLRSDTTAYANGAKKMQNVSLFSQGGFKRRNGTKRYASL---PGN 66
Query: 67 NRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKT-PYTFKDNKSLEYAV 125
R+ F D + F + ++ I + + +T + P+T +++
Sbjct: 67 ARLVGFDFDDNEQYICAFSNNRVDIYYLSND------SLTQTITSCPWTTSILFEMQFTQ 120
Query: 126 FGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQA 185
G T + H + +F+ F + +
Sbjct: 121 AGDTMIITHPSMATQVITRTS---LTAFSRSNYTFDSDSENVYQPYYKFAGSGVTLSASG 177
Query: 186 DTSTARITSDMKIFKPLDKGRSIRLG 211
T + ITS F +++
Sbjct: 178 TTGSVTITSSADHFSSDYVNVYLKIE 203
>gi|291334458|gb|ADD94112.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1161]
gi|291334665|gb|ADD94312.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C695]
gi|291336445|gb|ADD96000.1| hypothetical protein [uncultured organism MedDCM-OCT-S04-C1073]
Length = 121
Score = 96.5 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 7/111 (6%)
Query: 81 LLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVFGSTAVFVHKDHPPH 140
+L FG++ ++ S + + +PY + ++YA H +HP
Sbjct: 1 MLEFGNQYIRFYKDNGQILSSGSAY--EISSPYLEAELFDIKYAQSADVMYLCHPNHPVK 58
Query: 141 HLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQADTSTAR 191
L S+T + F P++ I A + + T T
Sbjct: 59 KLARTGH---TSWTLTSVDFQNGPFMDHN-IETTTITASHT-NAGQTGTLT 104
>gi|291334515|gb|ADD94168.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1201]
Length = 99
Score = 93.8 bits (231), Expect = 6e-17, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 6/105 (5%)
Query: 81 LLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVFGSTAVFVHKDHPPH 140
+L FG++ ++ S + + +PY + ++YA H +HP
Sbjct: 1 MLEFGNQYIRFYKDNGQILSSGSAY--EISSPYLEAELFDIKYAQSADVMYLCHPNHPVK 58
Query: 141 HLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQA 185
L S+T + F P++ I A + +
Sbjct: 59 KLARTGH---TSWTLTSVDFQNGPFMDHN-IETTTITASHTYCRW 99
>gi|13186158|emb|CAC33469.1| hypothetical protein [Legionella pneumophila]
Length = 818
Score = 93.8 bits (231), Expect = 8e-17, Method: Composition-based stats.
Identities = 84/541 (15%), Positives = 162/541 (29%), Gaps = 91/541 (16%)
Query: 7 TKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRS 66
++F+ GEL P L +R DL ++ +G K RN+I L G P
Sbjct: 6 ISNTFNRGELDPTLF-ARDDLDIYDKGARKLRNMIALWTGAARIAPGTIYVD-------- 56
Query: 67 NRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVF 126
+ + + L K + Y + Y +
Sbjct: 57 ----------------------MMVDRENGNAVIQDPLMVKGFDFTYDAD--AEITYTII 92
Query: 127 GSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQAD 186
+ G I+F + D + + V S A L+ D
Sbjct: 93 I-----------------RKSGTNIAFDI---------YYADALQTTVTSTAYLATQIQD 126
Query: 187 TSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGD 246
A + I + R ++ G W+ T + Y G + +
Sbjct: 127 IHVAAAHDRVLILHENVQIRQLKRGASHSSWSLTT------FEPRVYPTYDFSVIGEATN 180
Query: 247 RFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAP 306
+ T+ IT+ + S+ + G I V+ + +
Sbjct: 181 YQSF----TFTLSATTGSITITSSSAVFTHNHVGGLFRSLGGTARITAVASTTSASATVL 236
Query: 307 QSQTLFQAGVSVVSWFMSAWGEQE---------GYPSHVTFHNNRLLFSGSKGDELSVYL 357
+ T ++ S W G+P+ F+ NRL+ S + V L
Sbjct: 237 DNFTGTSCAGNLSSLAEKLWNSDTTTAPVSANRGWPARGVFYLNRLILGRSLAVKNLVNL 296
Query: 358 SSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSIS 417
S+ G + +F + D A + ++ + + +L L+ S
Sbjct: 297 STAGVYDNF----DDADLDGLVAFSVTFNGKGEQSVQSIVA-DDSILFTTANKLFAQSPL 351
Query: 418 LSKGLSID---FRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTEQG-FRFNEIT 473
+ ++I+ F S S + S+ + +FV ++ ST G + T
Sbjct: 352 VESPITINNVYFAPQSQSPATSIEAASIDNQTLFVSSDRTKVMQAMYSTADGKYITLPAT 411
Query: 474 QLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISD 533
L++ + + + EP I + ++ LL + + W +
Sbjct: 412 MLSNSIVDYINSNGTW--EPAGISTRLYLATQDNGTMLLYSTL--QTQNVAGWSLRTTTG 467
Query: 534 K 534
K
Sbjct: 468 K 468
>gi|158425207|ref|YP_001526499.1| tail tubular protein B [Azorhizobium caulinodans ORS 571]
gi|158332096|dbj|BAF89581.1| tail tubular protein B [Azorhizobium caulinodans ORS 571]
Length = 785
Score = 78.4 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 81/565 (14%), Positives = 162/565 (28%), Gaps = 75/565 (13%)
Query: 47 PLVSMPLMQEYRD-CRLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALF 105
L P + P + V + ++V + L++ +
Sbjct: 41 GLTKRPPTRHVAKLINSLPENAHVHIINRDAAERYVVVAFNGDLRVYGFDGVERTVNFPH 100
Query: 106 GKTYKTPYTFKDNKSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPW 165
GK Y + S F++KD ++ P
Sbjct: 101 GK----GYLANTSASFGAVTVADYTFFLNKD--------------VTVAMSPETKAGRPP 142
Query: 166 LGDGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIR-LGCHPPEWAKNTNYS 224
G + K I + A + + + + L W
Sbjct: 143 EGIVFVRQGNYACKYRIIVDGQAVAEKITSQTDPNDIQSSKIAQDLAAIINSWGSMVASV 202
Query: 225 IGA---YIVADDKVYRSLTT---GRSGDRFGYSKGATY------------VKDNNITWIT 266
IG+ AD + T G +G + T+ V+ +
Sbjct: 203 IGSTIHIRRADSLGFSLTTEDSLGDTGLVCMTKQTQTFANLPARAVQGYQVEISGTPGNP 262
Query: 267 VLNLSSKTSRESASGAVAPYY-VWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSA 325
N + + + G + + + ++ D ++ + W A
Sbjct: 263 YDNFWVEYDQAGSGGNNGVWREIAAPGRQIAFDPATMPHVLVREANGSFTFKQADWEKCA 322
Query: 326 WGEQEGYP---------SHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYD 376
G E P S + F+ NRL F SV S F++F + D
Sbjct: 323 AGSDETTPRPSFVGQRISDIFFYRNRLGFISD----ESVIFSRSAKFFNFWRETATDLLD 378
Query: 377 PTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLL-SISLSKGLSIDFRRVSGS-GV 434
+ + S + PF E +L+ D + ++L + + + +V+
Sbjct: 379 TDP-IDITTSHVKVSILRHAIPFNESLLLFSDQTQFMLGAGEVLTPSGVSLDQVTEFETS 437
Query: 435 YACPPVSVGDCLVFVCGVGR--RIKYISGSTEQGFRFNEITQLADHLFNQRILQLVY--Q 490
PV G + F G ++ + + N + +H+ I V+
Sbjct: 438 SRAKPVGAGQFVYFCTSRGEFTGVRE--YYIDGSTKTNNANDVTNHVPRY-IRGKVFKLC 494
Query: 491 EEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDF--AWHTHMISDKHYVLSAASFPNDNR 548
+ + V L D L ++ G+ +W + +L+A
Sbjct: 495 ASTNEDMLVALSDTDRD--TLYVYKYYNSGQEKVQSSWSRWKLQPGDVILNAEFI----- 547
Query: 549 GGTSLWMLVALSAGEERSFTVRLNL 573
++LW++V + G + RLN+
Sbjct: 548 -ESTLWLIVRRADGV---YLDRLNI 568
>gi|46581000|ref|YP_011808.1| hypothetical protein DVU2596 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46450421|gb|AAS97068.1| hypothetical protein DVU_2596 [Desulfovibrio vulgaris str.
Hildenborough]
Length = 259
Score = 75.7 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 27/77 (35%), Gaps = 11/77 (14%)
Query: 497 VWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWML 556
+W V E L+ E E WH H+ VLS + P G LW+
Sbjct: 1 MWCVTEDGG-----LIAMTRIPEHE-VAGWHRHVTDGA--VLSVCTIPG--TAGDELWVA 50
Query: 557 VAL-SAGEERSFTVRLN 572
V G R RL+
Sbjct: 51 VRREGGGMVRCCIERLD 67
>gi|297171931|gb|ADI22918.1| hypothetical protein [uncultured Rhizobium sp. HF0500_35F13]
Length = 336
Score = 74.1 bits (180), Expect = 6e-11, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 13/95 (13%)
Query: 487 LVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDK-----HYVLSAA 541
+ YQEEP SI++ V E + L+ + + + AWH H+ S A
Sbjct: 1 MAYQEEPLSIIYAVREDGE-----LVALTYQRD-QQVVAWHRHIFGGAFGTGNAVCESIA 54
Query: 542 SFPNDNRGGTSLWMLVALS-AGEERSFTVRLNLLD 575
P D +++++ + G + + LN D
Sbjct: 55 VIPTDLD-EYEVYVIIKRTINGATKRYVEVLNTFD 88
>gi|317487276|ref|ZP_07946071.1| hypothetical protein HMPREF0179_03434 [Bilophila wadsworthia 3_1_6]
gi|316921466|gb|EFV42757.1| hypothetical protein HMPREF0179_03434 [Bilophila wadsworthia 3_1_6]
Length = 794
Score = 73.7 bits (179), Expect = 7e-11, Method: Composition-based stats.
Identities = 78/566 (13%), Positives = 165/566 (29%), Gaps = 59/566 (10%)
Query: 48 LVSMPLMQEYRDCRLDPRSNRVFSFSIPDGGY--ALLVFGDKKLQIVVVRSSTKWSPALF 105
L P + R P +N + S I ++ + + + + K
Sbjct: 43 LKRRPATRHLARIRDTPAANGIASHHINRDETEQYIVTADASGINVFDLEGNAKTVSVTG 102
Query: 106 GKTYKTPYTFKDNKSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPW 165
N+ L + +++ L +S +
Sbjct: 103 TGAAYLAAATAPNRDLRFLTINDYTFVLNRRVAVKTL------PDLSPKRQPEAIVFIKQ 156
Query: 166 LGDGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSI 225
+ N + A LD ++I ++ T+ S
Sbjct: 157 ASYNTTYELILNGTTHAFTTEDGIAPADEPADKLSSLDICKAIADQIPKDAFSVQTSNST 216
Query: 226 GAYIVADD------------KVYRSLTTGRSGDRFGYSKG-------ATYVKDNNITWIT 266
D + S+ G+ RF + D + ++
Sbjct: 217 IWIRRHDGGDFTVKVQDSRSNTHTSVCKGKV-QRFSDLPTVAPRGFVTEIIGDASSSFDN 275
Query: 267 VLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAW 326
+ + A G+ D ++ A Q + W
Sbjct: 276 YFCVFEPSDAGDAFGSGTWKETVKPGIPCKLDPATLPHALIRQADGTFTFGPLEWGERIC 335
Query: 327 GEQEG--YPSHV-------TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDP 377
G+++ +PS V F+ NRL F + V +S G F++F L D
Sbjct: 336 GDEDSAPFPSFVGRTLNGLFFYRNRLSFLSGEN----VVMSEVGEFFNFFLTTVTTLVDS 391
Query: 378 TKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISL-SKGLSIDFRRVSGS-GVY 435
+ A + +S +H F G+L+ D S ++L ++ + V+
Sbjct: 392 D-VVDVAASHTKSSILHHAVTFSGGLLLFSDQSQFVLEHDTVLSNATVSIKPVTEFEASM 450
Query: 436 ACPPVSVGDCLVFVCGVG--RRIKYISGSTEQGFRFNEITQLADHLFNQRILQLV-YQEE 492
PVS G + F G ++ + N+ + + H+ + +
Sbjct: 451 KAAPVSSGKTVFFATDKGEWGGVRE-YITLPDNSDQNDASDITAHVPRYVRGNVSRLECS 509
Query: 493 PHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTS 552
+ + +VL + + L ++ + AW + VLSAA T
Sbjct: 510 TNEDMLLVLSEEMRTSLWLYKYFWNGSEKIQSAWSRWDMCG--EVLSAAIL------NTG 561
Query: 553 LWMLVALSAGEERSFTVRLNLLDDFK 578
+++++ G + ++++ +K
Sbjct: 562 VYLIMQYGDGV---YLEKMDITPGYK 584
>gi|320158424|ref|YP_004190802.1| tail tubular protein B [Vibrio vulnificus MO6-24/O]
gi|319933736|gb|ADV88599.1| tail tubular protein B [Vibrio vulnificus MO6-24/O]
Length = 931
Score = 73.4 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 58/361 (16%), Positives = 118/361 (32%), Gaps = 28/361 (7%)
Query: 225 IGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVA 284
+G +D Y S +++ Y N ++ ++ + S
Sbjct: 423 VGKADSENDGYYVKWVDKTS----MWTESTAYGLANEFNPASMPHILRRHQDSSKVSVDN 478
Query: 285 PYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLL 344
PY ++ ++ R++ + S M+ QE Y S + F RL
Sbjct: 479 PYGIYFKLEQGVWSKRTVGDELSAPIPSFVSTQDESGAMT----QERYISAMAFFRGRLW 534
Query: 345 FSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVL 404
G S G ++F D A TIH P +G++
Sbjct: 535 LLGGD----YACGSVVGDKFNFFRSTALTVLDDDPIDGYTDLTGQAETIHAAIPSSDGLV 590
Query: 405 VGCDTSLWLL-SISLSKGLSIDFRRVSGSGV-YACPPVSVGDCLVFVCGVGR--RIKYIS 460
V + +L+ S + + +F R++ C PV +GD + F + +
Sbjct: 591 VFTERGQYLISSQGMMSPTTFEFTRIASYATDNRCDPVLIGDRISFATKTSEYTSVSEMY 650
Query: 461 GSTEQG-FRFNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAE 519
+ G + NE+T + +L+ ++ ++ + R+ F
Sbjct: 651 VADTTGVRKANEVTSHCPTYIEGSVHRLLANATSNTEFLIMRGQGETLTGRMFIYDFLMN 710
Query: 520 GEGDF--AWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVAL--SAGEERSFTVRLNLLD 575
G AW + V + + L++++ S ++R R++L+
Sbjct: 711 GNERVQSAWSQWTFNGAVVVDGVLT-------SSELYLVMVRATSDKDKRMTVERIDLVQ 763
Query: 576 D 576
D
Sbjct: 764 D 764
>gi|26989008|ref|NP_744433.1| tail tubular protein B [Pseudomonas putida KT2440]
gi|24983829|gb|AAN67897.1|AE016421_9 tail tubular protein B [Pseudomonas putida KT2440]
Length = 781
Score = 73.0 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 73/579 (12%), Positives = 152/579 (26%), Gaps = 76/579 (13%)
Query: 38 RNLIPLRYGPLVSMPLMQEYRDCRLDP-RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRS 96
N I L+ P P S V + + + + L++ V
Sbjct: 32 ENGISTVSEGLMKRPPTTHLARVTASPLESAFVHTINRDASERYQVAITNGGLRVFAVDG 91
Query: 97 STKWSPALFGKTYKTPYTFKDNKSLEYA--VFGSTAVFVHKDHPPHHLLYIQDGDKISFT 154
+ T Y + + ++ V+K
Sbjct: 92 T----ERTVSFPDGTGYLAASDPASDFTAITVADYTFIVNKA-------------ITVAN 134
Query: 155 FDEIKFLPPPWLGDGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHP 214
+ P +I G I T T D + +
Sbjct: 135 RAAVSAPRGPEALISVIQGNYGRTYGVILNGVTVATYATPDGSDATKTSLASTDYIATEL 194
Query: 215 PEWAKNTNYSIGAYIVADDKVYRSLTTGRSGD-----------------RFGYSKGATYV 257
++ ++ + A +Y + T + D + + +
Sbjct: 195 VAGIQSAGFT---CVRAGSCLYITSTADFTIDCYDGFNNNAMKAYKKVVQSFSTLPSNCT 251
Query: 258 KDNNITWITVLNLSSKTSRESASGAVAP--YYVW----GDIKDVSKDGRSISVAPQSQTL 311
+ + + + V VW G + DG ++
Sbjct: 252 QAGGCLFEITGDPGDSSDDYYVYYDVGTDSTGVWRECVGPGVALGLDGSTMPHTLVRNAD 311
Query: 312 FQAGVSVVSWFMSAWGE--QEGYPSHV-------TFHNNRLLFSGSKGDELSVYLSSFGA 362
+W G+ PS V F+ NRL F +V S G
Sbjct: 312 GTFTFQAATWTDRVAGDADTNEDPSFVGRTINDVVFYRNRLGFLAD----EAVIFSESGK 367
Query: 363 FYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLL-SISLSKG 421
+++F D + + T + + F + +L+ D +L+ +
Sbjct: 368 YWNFYRTTVTELLDSDP-IDVSSTYTKVAILKHAVSFNKQLLLFSDEVQFLIDNGDTLTP 426
Query: 422 LSIDFRRVSGSGVYAC-PPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQLADHLF 480
+I + + A P SVG + F T+ N+ T +A H+
Sbjct: 427 KTISIKPSTEFVCNALTTPQSVGKNVYFASDRENWTAIREYFTDTNDVSNDSTDVASHVP 486
Query: 481 N---QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYV 537
+ ++ + VL D + + + + +W D +
Sbjct: 487 QYIPSGVFKIASSSSED--MLCVLTTGDRHSIYVYKFYWDGDTKVQSSWSKWTFPDTDTI 544
Query: 538 LSAASFPNDNRGGTSLWMLVALSAGEERSFTVRLNLLDD 576
LSA + +++ + + G + +L + D
Sbjct: 545 LSAEFL------DSEVFLAINRADG---LYFEKLTVATD 574
>gi|325272824|ref|ZP_08139161.1| tail tubular protein B [Pseudomonas sp. TJI-51]
gi|324102029|gb|EGB99538.1| tail tubular protein B [Pseudomonas sp. TJI-51]
Length = 781
Score = 70.7 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 80/575 (13%), Positives = 154/575 (26%), Gaps = 68/575 (11%)
Query: 38 RNLIPLRYGPLVSMPLMQEYRDCRLDP-RSNRVFSFSIPDGGYALLVFGDKKLQIVVVRS 96
N I L+ P P S V + + + + L++ V
Sbjct: 32 ENGISTVSEGLMKRPPTTHLARVTASPLESAFVHTINRDSTERYQVAITNGGLRVFAVDG 91
Query: 97 STKWSPALFGKTYKTPYTFKDNKSLEYA--VFGSTAVFVHKD-------------HPPHH 141
S T Y + + ++ V+K P
Sbjct: 92 S----ERTVSFPDGTSYLAASDPASDFTAITVADYTFIVNKAITVANRAAVSGTRGPEAL 147
Query: 142 LLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQADTSTARITSDMKIFKP 201
+ IQ ++ + S A S T F
Sbjct: 148 ISVIQGNYGRTYGVILNGVTVATYATP-DGSDATKTALASTDYIATELVAGIQSA-GFTC 205
Query: 202 LDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRS------GDRFGYSKGAT 255
+ G + + + + A KV +S +T S G F +
Sbjct: 206 VRAGSCLYITSTADFTIDCYDGFNNNAMKAYKKVVQSFSTLPSNCTQAGGCLFEITGDPG 265
Query: 256 YVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAG 315
D+ + V S+ RE G + DG ++
Sbjct: 266 DSSDDYYVYYDVGTDSTGVWRECV----------GPGVALGLDGSTMPHTLVRNADGTFT 315
Query: 316 VSVVSWFMSAWGE--QEGYPSHV-------TFHNNRLLFSGSKGDELSVYLSSFGAFYDF 366
+W G+ PS V F+ NRL F +V S G +++F
Sbjct: 316 FQAATWTDRVAGDADTNEDPSFVGRTINDVVFYRNRLGFLAD----EAVIFSESGKYWNF 371
Query: 367 SLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLL-SISLSKGLSID 425
D + + T + + F + +L+ D +L+ + +I
Sbjct: 372 YRTTVTELLDSDP-IDVSSTYTKVAILKHAVSFNKQLLLFSDEVQFLIDNGDTLTPKTIS 430
Query: 426 FRRVSGSGVYAC-PPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQLADHLFN--- 481
+ + A P SVG + F T+ N+ T +A H+
Sbjct: 431 IKPSTEFVCNALTTPQSVGKNVYFASDRENWTAIREYFTDTNDVSNDSTDVASHVPQYIP 490
Query: 482 QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAA 541
+ ++ + VL D + + + + +W D
Sbjct: 491 SGVFKIASSSSED--MLCVLTTGDRHSIYVYKFYWDGDTKVQSSWSKWTFPDTD------ 542
Query: 542 SFPNDNRGGTSLWMLVALSAGEERSFTVRLNLLDD 576
+ N + +++ + + G + +L + D
Sbjct: 543 TILNAEFLDSEVFLAINRADG---LYFEKLTVATD 574
>gi|9627472|ref|NP_042000.1| tail tubular protein B [Enterobacteria phage T7]
gi|139659|sp|P03747|VTTB_BPT7 RecName: Full=Tail tubular protein B
gi|15606|emb|CAA24430.1| unnamed protein product [Enterobacteria phage T7]
gi|37956682|gb|AAP33952.1| gene 12 [Enterobacteria phage T7]
Length = 794
Score = 68.0 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 74/586 (12%), Positives = 171/586 (29%), Gaps = 66/586 (11%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M + + + G + + D+ + ++ N L P +
Sbjct: 1 MALISQSIKNLKGG------ISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTL 54
Query: 61 RLDPRSNRVFSFSI-----PDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTF 115
D + + Y VF +++ + + K G Y T
Sbjct: 55 G-DNGALGQAPYIHLINRDEHEQYYA-VFTGSGIRVFDLSGNEKQVRYPNGSNYIK--TA 110
Query: 116 KDNKSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVK 175
L V+++ + + D + + G +I +
Sbjct: 111 NPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLINVRGGQYGRELIVHIN 170
Query: 176 SNAKLSISQADTSTAR-ITSDMKIFKPLDKGRSIRLGCHPPEWAKNT-----NYSIGAYI 229
D S + + + + + +R + +W N + + +
Sbjct: 171 GKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRT--NLSDWTVNVGQGFIHVTAPSGQ 228
Query: 230 VADDKVYRSLTTGRSGDRFGY---SKGATYVKDNNITWITVLNLSSKTSRESASGAVAPY 286
D + + + + S N + ++ +SK++ + A
Sbjct: 229 QIDSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAER 288
Query: 287 YVWGDIKDVSKDGRSI-SVAPQSQTLFQAGVSVVSWFMSAWG-------EQEGYPSHV-- 336
VW + + + + + P + G W W + +PS V
Sbjct: 289 KVWTETLGWNTEDQVLWETMPHALVRAADGNFDFKWL--EWSPKSCGDVDTNPWPSFVGS 346
Query: 337 -----TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSAS 391
F NRL F + + LS +++F D + AV+ +
Sbjct: 347 SINDVFFFRNRLGFLSGEN----IILSRTAKYFNFYPASIANLSDDDP-IDVAVSTNRIA 401
Query: 392 TIHWMHPFGEGVLVGCDTSLWLLSISLS-KGLSIDFRRVSGSGVYA-CPPVSVGDCLVFV 449
+ + PF E +L+ D + ++L+ S + S++ + V P +G + F
Sbjct: 402 ILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFA 461
Query: 450 CGVGRRIKYISGSTEQGFRFNEITQL--ADHLFNQ-------RILQLVYQEEPHSIVWVV 500
+ S + + +++ + A+ + + + + + V
Sbjct: 462 SP-----RSSFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFC--SV 514
Query: 501 LEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPND 546
L D S + + E +W + VL+ S +D
Sbjct: 515 LSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLACQSISSD 560
>gi|265525004|gb|ACY75867.1| tail tubular protein B [Enterobacteria phage T7]
Length = 794
Score = 68.0 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 74/586 (12%), Positives = 171/586 (29%), Gaps = 66/586 (11%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M + + + G + + D+ + ++ N L P +
Sbjct: 1 MALISQSIKNLKGG------ISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTL 54
Query: 61 RLDPRSNRVFSFSI-----PDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTF 115
D + + Y VF +++ + + K G Y T
Sbjct: 55 G-DNGALGQAPYIHLINRDEHEQYYA-VFTGSGIRVFDLSGNEKQVRYPNGSNYIK--TA 110
Query: 116 KDNKSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVK 175
L V+++ + + D + + G +I +
Sbjct: 111 NPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLINVRGGQYGRELIVHIN 170
Query: 176 SNAKLSISQADTSTAR-ITSDMKIFKPLDKGRSIRLGCHPPEWAKNT-----NYSIGAYI 229
D S + + + + + +R + +W N + + +
Sbjct: 171 GKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRT--NLSDWTVNVGQGFIHVTAPSGQ 228
Query: 230 VADDKVYRSLTTGRSGDRFGY---SKGATYVKDNNITWITVLNLSSKTSRESASGAVAPY 286
D + + + + S N + ++ +SK++ + A
Sbjct: 229 QIDSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAER 288
Query: 287 YVWGDIKDVSKDGRSI-SVAPQSQTLFQAGVSVVSWFMSAWG-------EQEGYPSHV-- 336
VW + + + + + P + G W W + +PS V
Sbjct: 289 KVWTETLGWNTEDQVLWETMPHALVRAADGNFDFKWL--EWSPKSCGDVDTNPWPSFVGS 346
Query: 337 -----TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSAS 391
F NRL F + + LS +++F D + AV+ +
Sbjct: 347 SINDVFFFRNRLGFLSGEN----IILSRTAKYFNFYPASIANLSDDDP-IDVAVSTNRIA 401
Query: 392 TIHWMHPFGEGVLVGCDTSLWLLSISLS-KGLSIDFRRVSGSGVYA-CPPVSVGDCLVFV 449
+ + PF E +L+ D + ++L+ S + S++ + V P +G + F
Sbjct: 402 ILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFA 461
Query: 450 CGVGRRIKYISGSTEQGFRFNEITQL--ADHLFNQ-------RILQLVYQEEPHSIVWVV 500
+ S + + +++ + A+ + + + + + V
Sbjct: 462 SP-----RSSFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFC--SV 514
Query: 501 LEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPND 546
L D S + + E +W + VL+ S +D
Sbjct: 515 LSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLACQSISSD 560
>gi|37956840|gb|AAP34107.1| gene 12 [Enterobacteria phage T7]
Length = 794
Score = 67.6 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 76/586 (12%), Positives = 171/586 (29%), Gaps = 66/586 (11%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M + + + G + + D+ + ++ N L P +
Sbjct: 1 MALISQSIKNLKGG------ISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTL 54
Query: 61 RLDPRSNRVFSFSI-----PDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTF 115
D + + Y VF +++ + + K G Y T
Sbjct: 55 G-DNGALGQAPYIHLINRDEHEQYYA-VFTGSGIRVFDLSGNEKQVRYPNGSNYIK--TA 110
Query: 116 KDNKSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVK 175
L V+++ + + D + + G +I +
Sbjct: 111 NPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNSNQDGLINVRGGQYGRELIVHIN 170
Query: 176 SNAKLSISQADTSTAR-ITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYS-IGAYIVADD 233
D S + + + + + +R + +W N I +
Sbjct: 171 GKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRT--NLSDWTVNVGQGFIHVIAPSGQ 228
Query: 234 KVYRSLTTGRSGDR-------FGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPY 286
++ T D+ + S N + ++ +SK++ + A
Sbjct: 229 QIDSFTTKDGYADQLINSVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAER 288
Query: 287 YVWGDIKDVSKDGRSI-SVAPQSQTLFQAGVSVVSWFMSAWG-------EQEGYPSHV-- 336
VW + + + + + P + G W W + +PS V
Sbjct: 289 KVWTETLGWNTEDQVLWETMPHALVRAADGNFDFKWL--EWSPKSCGDVDTNPWPSFVGS 346
Query: 337 -----TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSAS 391
F NRL F + + LS +++F D + AV+ +
Sbjct: 347 SINDVFFFRNRLGFLSGEN----IILSRTAKYFNFYPASIANLSDDDP-IDVAVSTNRIA 401
Query: 392 TIHWMHPFGEGVLVGCDTSLWLLSISLS-KGLSIDFRRVSGSGVYA-CPPVSVGDCLVFV 449
+ + PF E +L+ D + ++L+ S + S++ + V P +G + F
Sbjct: 402 ILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFA 461
Query: 450 CGVGRRIKYISGSTEQGFRFNEITQL--ADHLFNQ-------RILQLVYQEEPHSIVWVV 500
+ S + + +++ + A+ + + + + + V
Sbjct: 462 SS-----RSSFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFC--SV 514
Query: 501 LEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPND 546
L D S + + E +W + VL+ S +D
Sbjct: 515 LSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLACQSISSD 560
>gi|37956893|gb|AAP34159.1| gene 12 [Enterobacteria phage T7]
Length = 794
Score = 66.4 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 76/586 (12%), Positives = 171/586 (29%), Gaps = 66/586 (11%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M + + + G + + D+ + ++ N L P +
Sbjct: 1 MALISQSIKNLKGG------ISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTL 54
Query: 61 RLDPRSNRVFSFSI-----PDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTF 115
D + + Y VF +++ + + K G Y T
Sbjct: 55 G-DNGALGQAPYIHLINRDEHEQYYA-VFTGSGIRVFDLSGNEKQVRYPNGSNYIK--TA 110
Query: 116 KDNKSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVK 175
L V+++ + + D + + G +I +
Sbjct: 111 NPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNSNQDGLINVRGGQYGRELIVHIN 170
Query: 176 SNAKLSISQADTSTAR-ITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYS-IGAYIVADD 233
D S + + + + + +R + +W N I +
Sbjct: 171 GKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRT--NLSDWTVNVGQGFIHVIAPSGQ 228
Query: 234 KVYRSLTTGRSGDR-------FGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPY 286
++ T D+ + S N + ++ +SK++ + A
Sbjct: 229 QIDSFTTKDGYADQLINSVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAER 288
Query: 287 YVWGDIKDVSKDGRSI-SVAPQSQTLFQAGVSVVSWFMSAWG-------EQEGYPSHV-- 336
VW + + + + + P + G W W + +PS V
Sbjct: 289 KVWTETLGWNTEDQVLWETMPHALVRAADGNFDFKWL--EWSPKSCGDVDTNPWPSFVGS 346
Query: 337 -----TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSAS 391
F NRL F + + LS +++F D + AV+ +
Sbjct: 347 SINDVFFFRNRLGFLSGEN----IILSRTAKYFNFYPASIANLSDDDP-IDVAVSTNRIA 401
Query: 392 TIHWMHPFGEGVLVGCDTSLWLLSISLS-KGLSIDFRRVSGSGVYA-CPPVSVGDCLVFV 449
+ + PF E +L+ D + ++L+ S + S++ + V P +G + F
Sbjct: 402 ILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFA 461
Query: 450 CGVGRRIKYISGSTEQGFRFNEITQL--ADHLFNQ-------RILQLVYQEEPHSIVWVV 500
+ S + + +++ + A+ + + + + + V
Sbjct: 462 SS-----RPSFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFC--SV 514
Query: 501 LEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPND 546
L D S + + E +W + VL+ S +D
Sbjct: 515 LSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLACQSISSD 560
>gi|194100399|ref|YP_002003974.1| gp12 [Enterobacteria phage 13a]
gi|193201446|gb|ACF15923.1| gp12 [Enterobacteria phage 13a]
Length = 794
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 73/587 (12%), Positives = 169/587 (28%), Gaps = 68/587 (11%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M + + + G + + D+ + ++ N L P + +
Sbjct: 1 MALISQSIKNLKGG------ISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLKTL 54
Query: 61 RLDPRSNRVFSFSI-----PDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTF 115
+ + Y VF +++ + + K G Y T
Sbjct: 55 GY-NGALGQAPYIHLINRDEHEQYYA-VFTGSGIRVFDLAGNEKQVRYPNGSNYIN--TA 110
Query: 116 KDNKSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVK 175
L V+++ + + D + + G +I +
Sbjct: 111 NPRNDLRMVTVADYTFIVNRNVVAQKNTNSVNLPNYNPNQDGLINVRGGQYGRELIVHIN 170
Query: 176 SN--AKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNT-----NYSIGAY 228
AK I +D + ++ + +W N + + +
Sbjct: 171 GKDVAKYKIPDGSKPEHVNNTDAQWLAEELAN---QMRTNLSDWTVNVGQGFIHVTAPSG 227
Query: 229 IVADDKVYRSLTTGRSGDRFGY---SKGATYVKDNNITWITVLNLSSKTSRESASGAVAP 285
D + + + + S N + ++ +SK++ +
Sbjct: 228 QQIDSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDDE 287
Query: 286 YYVWGDIKDVSKDGRSI-SVAPQSQTLFQAGVSVVSWFMSAWG-------EQEGYPSHV- 336
VW + + + + + P + G W W + +PS V
Sbjct: 288 RKVWTETLGWNTEDQVLWETMPHALVRAADGNFDFKWL--EWSPKSCGDVDTNPWPSFVG 345
Query: 337 ------TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSA 390
F NRL F + + LS +++F D + AV+
Sbjct: 346 SSINDVFFFRNRLGFLSGEN----IILSRTAKYFNFYPASIANLSDDDP-IDVAVSTNRI 400
Query: 391 STIHWMHPFGEGVLVGCDTSLWLLSISLS-KGLSIDFRRVSGSGVYA-CPPVSVGDCLVF 448
+ + + PF E +L+ D + ++L+ S + S++ + V P +G + F
Sbjct: 401 AILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYF 460
Query: 449 VCGVGRRIKYISGSTEQGFRFNEITQL--ADHLFNQ-------RILQLVYQEEPHSIVWV 499
+ S + + +++ + A+ + + + + +
Sbjct: 461 ASP-----RSSFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFC--S 513
Query: 500 VLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPND 546
VL D S + + E +W + VL+ S +D
Sbjct: 514 VLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLACQSINSD 560
>gi|37956735|gb|AAP34004.1| gene 12 [Enterobacteria phage T7]
gi|37956785|gb|AAP34053.1| gene 12 [Enterobacteria phage T7]
Length = 794
Score = 65.3 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 73/586 (12%), Positives = 171/586 (29%), Gaps = 66/586 (11%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M + + + G + + D+ + ++ N L P +
Sbjct: 1 MALISQSIKNLKGG------ISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTL 54
Query: 61 RLDPRSNRVFSFSI-----PDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTF 115
D + + Y VF +++ + + K G Y T
Sbjct: 55 G-DNGALGQAPYIHLINRDEHEQYYA-VFTGSGIRVFDLSGNEKQVRYPNGSNYIK--TA 110
Query: 116 KDNKSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVK 175
L V+++ + + D + + G +I +
Sbjct: 111 NPRNDLRMVTVADYTFIVNRNIVAQKNTKSVNLPNYNPNQDGLINVRGGQYGRELIVHIN 170
Query: 176 SNAKLSISQADTSTAR-ITSDMKIFKPLDKGRSIRLGCHPPEWAKNT-----NYSIGAYI 229
D S + + + + + +R + +W N + + +
Sbjct: 171 GKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRT--NLSDWTVNVGQGFIHVTAPSGQ 228
Query: 230 VADDKVYRSLTTGRSGDRFGY---SKGATYVKDNNITWITVLNLSSKTSRESASGAVAPY 286
D + + + + S N + ++ +SK++ + A
Sbjct: 229 QIDSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAER 288
Query: 287 YVWGDIKDVSKDGRSI-SVAPQSQTLFQAGVSVVSWFMSAWG-------EQEGYPSHV-- 336
VW + + + + + P + G W W + +PS V
Sbjct: 289 KVWTETLGWNTEDQVLWETMPHALVRAADGNFDFKWL--EWSPKSCGDVDTNPWPSFVGS 346
Query: 337 -----TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSAS 391
F NRL F + + LS +++F D + AV+ +
Sbjct: 347 SINDVFFFRNRLGFLSGEN----IILSRTAKYFNFYPASIANLSDDDP-IDVAVSTNRIA 401
Query: 392 TIHWMHPFGEGVLVGCDTSLWLLSISLS-KGLSIDFRRVSGSGVYA-CPPVSVGDCLVFV 449
+ + PF E +L+ D + ++L+ S + S++ + V P +G + F
Sbjct: 402 ILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFA 461
Query: 450 CGVGRRIKYISGSTEQGFRFNEITQL--ADHLFNQ-------RILQLVYQEEPHSIVWVV 500
+ S + + +++ + A+ + + + + + V
Sbjct: 462 SP-----RSSFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFC--SV 514
Query: 501 LEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPND 546
L + S + + E +W + VL+ S +D
Sbjct: 515 LSHGNPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLACQSISSD 560
>gi|254505331|ref|ZP_05117479.1| hypothetical protein SADFL11_PLAS29 [Labrenzia alexandrii DFL-11]
gi|222436175|gb|EEE42857.1| hypothetical protein SADFL11_PLAS29 [Labrenzia alexandrii DFL-11]
Length = 683
Score = 64.5 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 55/326 (16%), Positives = 105/326 (32%), Gaps = 32/326 (9%)
Query: 241 TGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGR 300
+ GD + S GA+ + D + +++ + ++ + I
Sbjct: 162 SATDGDVYRISNGASPLDDYYVKYVSADTEWVECAKPGEVIGFDAKTMPHQIVREEDGSF 221
Query: 301 SISVAPQSQTLFQAGVSVV--SWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLS 358
S+S S SV S+ A+ + + F NRL F + + S
Sbjct: 222 SVSRVEWSDRQVGDAESVKDPSFVGRAFKD-------IFFFKNRLGFVSDENT----FFS 270
Query: 359 SFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLW-LLSIS 417
F++ D D + A + + + W+ PF + + D + + L S
Sbjct: 271 QAADFFNLWPDQANVVGDSDP-VDIAASTTKVTILQWVVPFRRALFLSADLAQFELASSD 329
Query: 418 LSKGLSIDFRRVSGS-GVYACPPVSVGDCLVF-VCGVGRRIKYISGSTEQGFR--FNEIT 473
S+ + C P ++GD L F G+ + Y + ++T
Sbjct: 330 FMTPTSVAVDLATSYEATNLCRPTTLGDELYFAAEKQGKTVIYEYFYDDDTLSNTAIDVT 389
Query: 474 QLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDF--AWHTHMI 531
+ A+ I VY E +I +L D + R G+ AW
Sbjct: 390 KHAE----GYIPGRVYLMEGSAIANTLLCVADGDSASMYTYRVFWNGQEKIQSAWSRWTF 445
Query: 532 SDKHYVLSAASFPNDNRGGTSLWMLV 557
+ Y+ + ++LV
Sbjct: 446 DNS-YIDGVKVI------NDTAYVLV 464
>gi|254503713|ref|ZP_05115864.1| hypothetical protein SADFL11_3752 [Labrenzia alexandrii DFL-11]
gi|222439784|gb|EEE46463.1| hypothetical protein SADFL11_3752 [Labrenzia alexandrii DFL-11]
Length = 634
Score = 64.1 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 55/326 (16%), Positives = 105/326 (32%), Gaps = 32/326 (9%)
Query: 241 TGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGR 300
+ GD + S GA+ + D + +++ + ++ + I
Sbjct: 113 SATDGDVYRISNGASPLDDYYVKYVSADTEWVECAKPGEVIGFDAKTMPHQIVREEDGSF 172
Query: 301 SISVAPQSQTLFQAGVSVV--SWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLS 358
S+S S SV S+ A+ + + F NRL F + + S
Sbjct: 173 SVSRVEWSDRQVGDAESVKDPSFVGRAFKD-------IFFFKNRLGFVSDENT----FFS 221
Query: 359 SFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLW-LLSIS 417
F++ D D + A + + + W+ PF + + D + + L S
Sbjct: 222 QAADFFNLWPDQANVVGDSDP-VDIAASTTKVTILQWVVPFRRALFLSADLAQFELASSD 280
Query: 418 LSKGLSIDFRRVSGS-GVYACPPVSVGDCLVF-VCGVGRRIKYISGSTEQGFR--FNEIT 473
S+ + C P ++GD L F G+ + Y + ++T
Sbjct: 281 FMTPTSVAVDLATSYEATNLCRPTTLGDELYFAAEKQGKTVIYEYFYDDDTLSNTAIDVT 340
Query: 474 QLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDF--AWHTHMI 531
+ A+ I VY E +I +L D + R G+ AW
Sbjct: 341 KHAE----GYIPGRVYLMEGSAIANTLLCVADGDSASMYTYRVFWNGQEKIQSAWSRWTF 396
Query: 532 SDKHYVLSAASFPNDNRGGTSLWMLV 557
+ Y+ + ++LV
Sbjct: 397 DNS-YIDGVKVI------NDTAYVLV 415
>gi|30387490|ref|NP_848299.1| tail protein [Yersinia pestis phage phiA1122]
gi|30314127|gb|AAP20535.1| tail protein [Yersinia pestis phage phiA1122]
Length = 794
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 47/307 (15%), Positives = 101/307 (32%), Gaps = 40/307 (13%)
Query: 266 TVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVA-PQSQTLFQAGVSVVSWFMS 324
++ +SK++ + A VW + + + + + P + G W
Sbjct: 268 KIVGDASKSADQYYVRYDAERKVWTETLGWNTENQVLLETMPHALVRAADGNFDFKWL-- 325
Query: 325 AWG-------EQEGYPSHV-------TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDG 370
W + +PS V F NRL F + + LS +++F
Sbjct: 326 EWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGEN----IILSRTAKYFNFYPAS 381
Query: 371 EYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLS-KGLSIDFRRV 429
+ + AV+ + + + PF E +L+ D + ++L+ S + S++
Sbjct: 382 IANLSNDDP-IDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSRSVELNLT 440
Query: 430 SGSGVYA-CPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQL------ADHLFN- 481
+ V P +G + F + S + + +++ + H+ N
Sbjct: 441 TQFDVQDRARPYGIGRNVYFASP-----RSSYTSIHRYYAVQDVSSVKNSEDITSHVPNY 495
Query: 482 --QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLS 539
+ + + VL D S + + E +W + VL+
Sbjct: 496 IPNGVFSICGSGTENFC--SVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLA 553
Query: 540 AASFPND 546
S +D
Sbjct: 554 CQSISSD 560
>gi|323512066|gb|ADX87527.1| tail tubular protein B [Vibrio phage ICP3_2009_B]
Length = 794
Score = 61.4 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 79/577 (13%), Positives = 166/577 (28%), Gaps = 61/577 (10%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHA-QGVAKSRNLIPLRYGPLVSMPLMQEYRD 59
M + + + G + + D+ ++ QG + G L P +
Sbjct: 1 MALISQSIKNLKGG------ISQQPDILRYSDQGSKQINGFSSEVEG-LQKRPPSVHVKR 53
Query: 60 CRL---DPRSNRVFSFSIPDGGYALLVFGDKKLQIVVV-RSSTKWSPALFGKTYKTPYTF 115
+ + + + F +++ + K A G +Y T +
Sbjct: 54 LTDQFGLGQKPYCHIINRDEVERYAVFFTGSNIRVFDLFTGDEKTVNAPNGLSYVT--SS 111
Query: 116 KDNKSLEYAVFGSTAVFVHKDHP--------PHHLLYIQDGDKISFTFDEIKFLPPPWLG 167
K L ++++ P L + + +
Sbjct: 112 NPRKDLRMVTVADYTFILNRNVSTAQGTTNTPSGLAPFGHFGLVVIRGGQYGRTYRVKVN 171
Query: 168 DGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGA 227
+ + ++ + A D +++G ++ G ++K+ I +
Sbjct: 172 GSVEASFETPLGDQVEHAKQIDIAYIIDQLAAGLINRGWAVTKGSGYFYFSKSGTVLINS 231
Query: 228 YIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYY 287
V D L G D ++ Y +N I I V + + A
Sbjct: 232 LEVEDG-YNGQLAWGIINDVQKTTQLPVYAPNNYI--IRVSGDPTLNQDDYYVKFDASRN 288
Query: 288 VWGDIKDVSKDGRSIS-VAPQSQTLFQAGVSVVS---WFMSAWGE--QEGYPSHV----- 336
VW + + P G W A G+ YPS +
Sbjct: 289 VWTECPAPNIKADYNKDTMPHVLIREADGTFTFKQADWTHRAAGDDDTNPYPSFIGNSIN 348
Query: 337 --TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIH 394
F NRL F + V LS G +++F + D + AV+ S +
Sbjct: 349 DIFFFRNRLGFLSGEN----VILSGSGNYFNFFPESVAVLTDTDP-IDVAVSTNRISILK 403
Query: 395 WMHPFGEGVLVGCDTSLWLLSISLS-KGLSIDFRRVSGSGV-YACPPVSVGDCLVFVCGV 452
+ PF E +++ D + ++LS ++ + V P +G + FV
Sbjct: 404 YAVPFSEELILWSDQAQFVLSSDGGLTPTTVRLDLTTEFEVTEQTRPFGIGRGVYFVSP- 462
Query: 453 GRRIKYISGSTEQGFRFNEITQL------ADHLF---NQRILQLVYQEEPHSIVWVVLEP 503
+ S + + ++TQ+ + H+ + ++ + + +L
Sbjct: 463 ----RAKFSSVRRFYAVQDVTQVKNAEDISAHVPSYVENGVFKMSGSSTENFLT--ILTE 516
Query: 504 KDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSA 540
+ + E +W VL
Sbjct: 517 GNEQRVYFYKFLYLQEQLVQQSWSHWDFGVNCRVLCC 553
>gi|167565012|ref|ZP_02357928.1| tail tubular protein B [Burkholderia oklahomensis EO147]
Length = 776
Score = 61.0 bits (146), Expect = 5e-07, Method: Composition-based stats.
Identities = 81/582 (13%), Positives = 162/582 (27%), Gaps = 75/582 (12%)
Query: 39 NLIPLRY-GPLVSMPLMQEYRDCRLDPRSNR-VFSFSIPDGGYALLV----FGDKKLQIV 92
N +P G L + P + + F DG + + G +++ +
Sbjct: 36 NFLPSVDIGGLADRVGTTCIANLAAAPYKSEGTYMFRTTDGQRWMFIRRADAGYPEIRNM 95
Query: 93 VVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKIS 152
V + + F + Y L++ T + ++ D + K
Sbjct: 96 VNGALAAVTCGPFVQNY-----INSASRLKFLSMSDTTLVLNPDVATRFVAPSAGITKTR 150
Query: 153 FTFDEIKFLPPPWLGDGMISGVKSNAKLSISQADTST------------------ARITS 194
+ I+ L + + S S A + A T I+
Sbjct: 151 -AYAVIRKLSSNYQTFYLNSDAGSAATVYDGSAGVKTREWVAQRLMEQCIAHMPGLTISR 209
Query: 195 DMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGA 254
+ + I +W + I + A + + G S +
Sbjct: 210 VANVVRISGPEAIINTLNGGNDWDETAFVLIKGRVSAASDLPAQMFPGESVMVDLENGAT 269
Query: 255 TYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQA 314
+T+ N +T+ + + + G + + +
Sbjct: 270 KSAYW--VTYDRTTNSYKETAWLDNFANAGNWDASTMPVRIHQTGVNSFEIQPVDWVPRK 327
Query: 315 GVSVVSWFMSAWGEQEGYPSH-VTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYG 373
S + + G P + RL FS + V S ++F D
Sbjct: 328 VGDNDSNAPAPFN---GAPITDMALWKGRLWFSSASW----VVGSQPDDLFNFWQDSARE 380
Query: 374 CYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISL-SKGLSIDFRRVSGS 432
A D ++ + F + ++V + L S K + +
Sbjct: 381 VVASDPVKVQAEAD--LGSVSHLAGFRDNLMVFLRGAQCSLDGSQPVKPDTAALGVATRY 438
Query: 433 GV-YACPPVSVGDCLVFV--CGVGRRIKYISGSTEQGFRFNEITQLADHLFN------QR 483
V ACPP VG+ +++ + EQ N L+ H+ +R
Sbjct: 439 DVDAACPPSVVGNVMLYTGSQEGRSVLWE--YQFEQATENNYAEDLSKHIPRYCPGSVRR 496
Query: 484 ILQLVYQEEPHSIVWVVLEPK------------DNSFPRLLGCRFSAEGEGDFAWHTHMI 531
I+ + + +W L+ + F + WH +
Sbjct: 497 IVGSA--QSGRTFLWSSLDAATLYVHSSYWQAQQRAQNAWNKLTF---AQMSNIWHHWVD 551
Query: 532 SDKHYVLSAASFPNDNRGGTSLWMLVALSAGEERSFTVRLNL 573
YVL S + + + V + GE R +RL++
Sbjct: 552 EGNLYVLGQTSV----GYLSLVAVPVDANLGEHREIDLRLDM 589
>gi|68299742|ref|YP_249591.1| Tail tubular protein B [Vibriophage VP4]
gi|66473281|gb|AAY46290.1| tail tubular protein B [Vibriophage VP4]
Length = 794
Score = 61.0 bits (146), Expect = 5e-07, Method: Composition-based stats.
Identities = 45/278 (16%), Positives = 85/278 (30%), Gaps = 36/278 (12%)
Query: 287 YVWGDIKDVSKDGRSISVA-PQSQTLFQAGVSVVS---WFMSAWGE--QEGYPSHV---- 336
VW + + P G W A G+ YPS +
Sbjct: 288 NVWTECPAPNIKADYNKATMPHVLIREADGTFTFKQADWTHRAAGDDETNPYPSFIGNSI 347
Query: 337 ---TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTI 393
F NRL F + V LS G +++F + D + AV+ S +
Sbjct: 348 NDIFFFRNRLGFLSGEN----VILSGSGNYFNFFPESVAVLTDTDP-IDVAVSTNRISIL 402
Query: 394 HWMHPFGEGVLVGCDTSLWLLSISLS-KGLSIDFRRVSGSGV-YACPPVSVGDCLVFVCG 451
+ PF E +++ D + ++LS +I + V P +G + FV
Sbjct: 403 KYAVPFSEELILWSDQAQFVLSSDGGLTPTTIRLDLTTEFEVTEQARPYGIGRGVYFVSP 462
Query: 452 VGRRIKYISGSTEQGFRFNEITQL------ADHLF---NQRILQLVYQEEPHSIVWVVLE 502
+ S + + ++TQ+ + H+ + ++ + + +L
Sbjct: 463 -----RAKFSSVRRFYAVQDVTQVKNAEDISAHVPYYVENGVFKMSGSSTENFLT--ILT 515
Query: 503 PKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSA 540
+ + E +W VL
Sbjct: 516 EGNEQRVYFYKFLYLQEQLVQQSWSHWDFGVNCRVLCC 553
>gi|326633075|ref|YP_004306686.1| predicted tail tubular protein B [Salmonella phage Vi06]
gi|301170548|emb|CBV65236.1| predicted tail tubular protein B [Salmonella phage Vi06]
Length = 795
Score = 61.0 bits (146), Expect = 5e-07, Method: Composition-based stats.
Identities = 42/318 (13%), Positives = 100/318 (31%), Gaps = 44/318 (13%)
Query: 266 TVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSA 325
++ +SK++ + VW + + + + + + A +
Sbjct: 269 KIVGDASKSADQYYVRYDTTRKVWSETLGWNVNDQLLFETMPHALVRAADGN-FELKRIE 327
Query: 326 WG-------EQEGYPSH-------VTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGE 371
W + +PS V F NRL + + LS +++F
Sbjct: 328 WSPKTCGDDDTNPWPSFMDSTINDVFFFRNRLGLLSGEN----IILSRTAKYFNFYPASI 383
Query: 372 YGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLS-KGLSIDFRRVS 430
D + AV+ + + + PF E +L+ D + ++L+ S + SI+ +
Sbjct: 384 ATLSDDDP-IDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSRSIELNLTT 442
Query: 431 GSGVYA-CPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQL--ADHLFNQ----- 482
V P +G + F + S + + +++ + A+ +
Sbjct: 443 QFDVQDRARPFGIGRNVYFASP-----RSSFTSIHRYYAVQDVSSVKNAEDITAHVQNYI 497
Query: 483 --RILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSA 540
+ + + VL D S + + E +W VL+
Sbjct: 498 PNGVFDICGSSTENFCA--VLSQGDQSKIFMYKFLYLNEELRQQSWSHWDFGSNVQVLAC 555
Query: 541 ASFPNDNRGGTSLWMLVA 558
+ +++++
Sbjct: 556 QCI------NSDMYVILR 567
>gi|325171313|ref|YP_004251284.1| tail tubular protein B [Vibrio phage ICP3]
gi|323512019|gb|ADX87481.1| tail tubular protein B [Vibrio phage ICP3]
Length = 794
Score = 61.0 bits (146), Expect = 5e-07, Method: Composition-based stats.
Identities = 44/278 (15%), Positives = 85/278 (30%), Gaps = 36/278 (12%)
Query: 287 YVWGDIKDVSKDGRSISVA-PQSQTLFQAGVSVVS---WFMSAWGE--QEGYPSHV---- 336
VW + + P G W A G+ YPS +
Sbjct: 288 NVWTECPAPNIKADYNKATMPHVLIREADGTFTFKQADWTHRAAGDDDTNPYPSFIGNSI 347
Query: 337 ---TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTI 393
F NRL F + V LS G +++F + D + AV+ S +
Sbjct: 348 NDIFFFRNRLGFLSGEN----VILSGSGNYFNFFPESVAVLTDTDP-IDVAVSTNRISIL 402
Query: 394 HWMHPFGEGVLVGCDTSLWLLSISLS-KGLSIDFRRVSGSGV-YACPPVSVGDCLVFVCG 451
+ PF E +++ D + ++LS ++ + V P +G + FV
Sbjct: 403 KYAVPFSEELILWSDQAQFVLSSDGGLTPTTVRLDLTTEFEVTEQTRPFGIGRGVYFVSP 462
Query: 452 VGRRIKYISGSTEQGFRFNEITQL------ADHLF---NQRILQLVYQEEPHSIVWVVLE 502
+ S + + ++TQ+ + H+ + ++ + + +L
Sbjct: 463 -----RAKFSSVRRFYAVQDVTQVKNAEDISAHVPSYVENGVFKMSGSSTENFLT--ILT 515
Query: 503 PKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSA 540
+ + E +W VL
Sbjct: 516 EGNEQRVYFYKFLYLQEQLVQQSWSHWDFGVNCRVLCC 553
>gi|323512212|gb|ADX87670.1| tail tubular protein B [Vibrio phage ICP3_2007_A]
Length = 794
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 79/577 (13%), Positives = 166/577 (28%), Gaps = 61/577 (10%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHA-QGVAKSRNLIPLRYGPLVSMPLMQEYRD 59
M + + + G + + D+ ++ QG + G L P +
Sbjct: 1 MALISQSIKNLKGG------ISQQPDILRYSDQGSKQINGFSSEVEG-LQKRPPSVHVKR 53
Query: 60 CRL---DPRSNRVFSFSIPDGGYALLVFGDKKLQIVVV-RSSTKWSPALFGKTYKTPYTF 115
+ + + + F +++ + K A G +Y T +
Sbjct: 54 LTDQFGLGQKPYCHIINRDEVERYAVFFTGSNIRVFDLFTGDEKTVNAPNGLSYVT--SS 111
Query: 116 KDNKSLEYAVFGSTAVFVHKDHP--------PHHLLYIQDGDKISFTFDEIKFLPPPWLG 167
K L ++++ P L + + +
Sbjct: 112 NPRKDLRMVTVADYTFILNRNVSTAQGTTNTPSGLAPFGHFGLVVIRGGQYGRTYRVKVN 171
Query: 168 DGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGA 227
+ + ++ + A D +++G ++ G ++K+ I +
Sbjct: 172 GSVEASFETPLGDQVEHAKQIDIAYIIDQLAAGLINRGWAVTKGSGYFYFSKSGTVIINS 231
Query: 228 YIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYY 287
V D L G D ++ Y +N I I V + + A
Sbjct: 232 LEVEDG-YNGQLAWGIINDVQKTTQLPVYAPNNYI--IRVSGDPTLNQDDYYVKFDASRN 288
Query: 288 VWGDIKDVSKDGRSISVA-PQSQTLFQAGVSVVS---WFMSAWGE--QEGYPSHV----- 336
VW + + P G W A G+ YPS +
Sbjct: 289 VWTECPAPNIKADYNKATMPHVLIREADGTFTFKQADWTHRAAGDDDTNPYPSFIGNSIN 348
Query: 337 --TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIH 394
F NRL F + V LS G +++F + D + AV+ S +
Sbjct: 349 DIFFFRNRLGFLSGEN----VILSGSGNYFNFFPESVAVLTDTDP-IDVAVSTNRISILK 403
Query: 395 WMHPFGEGVLVGCDTSLWLLSISLS-KGLSIDFRRVSGSGV-YACPPVSVGDCLVFVCGV 452
+ PF E +++ D + ++LS ++ + V P +G + FV
Sbjct: 404 YAVPFSEELILWSDQAQFVLSSDGGLTPTTVRLDLTTEFEVTEQTRPFGIGRGVYFVSP- 462
Query: 453 GRRIKYISGSTEQGFRFNEITQL------ADHLF---NQRILQLVYQEEPHSIVWVVLEP 503
+ S + + ++TQ+ + H+ + ++ + + +L
Sbjct: 463 ----RAKFSSVRRFYAVQDVTQVKNAEDISAHVPSYVENGVFKMSGSSTENFLT--ILTE 516
Query: 504 KDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSA 540
+ + E +W VL
Sbjct: 517 GNEQRVYFYKFLYLQEQLVQQSWSHWDFGVNCRVLCC 553
>gi|323512164|gb|ADX87623.1| tail tubular protein B [Vibrio phage ICP3_2008_A]
Length = 795
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 79/577 (13%), Positives = 166/577 (28%), Gaps = 61/577 (10%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHA-QGVAKSRNLIPLRYGPLVSMPLMQEYRD 59
M + + + G + + D+ ++ QG + G L P +
Sbjct: 1 MALISQSIKNLKGG------ISQQPDILRYSDQGSKQINGFSSEVEG-LQKRPPSVHVKR 53
Query: 60 CRL---DPRSNRVFSFSIPDGGYALLVFGDKKLQIVVV-RSSTKWSPALFGKTYKTPYTF 115
+ + + + F +++ + K A G +Y T +
Sbjct: 54 LTDQFGLGQKPYCHIINRDEVERYAVFFTGSNIRVFDLFTGDEKTVNAPNGLSYVT--SS 111
Query: 116 KDNKSLEYAVFGSTAVFVHKDHP--------PHHLLYIQDGDKISFTFDEIKFLPPPWLG 167
K L ++++ P L + + +
Sbjct: 112 NPRKDLRMVTVADYTFILNRNVSTAQGTTNTPSGLAPFGHFGLVVIRGGQYGRTYRVKVN 171
Query: 168 DGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGA 227
+ + ++ + A D +++G ++ G ++K+ I +
Sbjct: 172 GSVEASFETPLGDQVEHAKQIDIAYIIDQLAAGLINRGWAVTKGSGYFYFSKSGTVIINS 231
Query: 228 YIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYY 287
V D L G D ++ Y +N I I V + + A
Sbjct: 232 LEVEDG-YNGQLAWGIINDVQKTTQLPVYAPNNYI--IRVSGDPTLNQDDYYVKFDASRN 288
Query: 288 VWGDIKDVSKDGRSISVA-PQSQTLFQAGVSVVS---WFMSAWGE--QEGYPSHV----- 336
VW + + P G W A G+ YPS +
Sbjct: 289 VWTECPAPNIKADYNKATMPHVLIREADGTFTFKQADWTHRAAGDDDTNPYPSFIGNSIN 348
Query: 337 --TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIH 394
F NRL F + V LS G +++F + D + AV+ S +
Sbjct: 349 DIFFFRNRLGFLSGEN----VILSGSGNYFNFFPESVAVLTDTDP-IDVAVSTNRISILK 403
Query: 395 WMHPFGEGVLVGCDTSLWLLSISLS-KGLSIDFRRVSGSGV-YACPPVSVGDCLVFVCGV 452
+ PF E +++ D + ++LS ++ + V P +G + FV
Sbjct: 404 YAVPFSEELILWSDQAQFVLSSDGGLTPTTVRLDLTTEFEVTEQTRPFGIGRGVYFVSP- 462
Query: 453 GRRIKYISGSTEQGFRFNEITQL------ADHLF---NQRILQLVYQEEPHSIVWVVLEP 503
+ S + + ++TQ+ + H+ + ++ + + +L
Sbjct: 463 ----RAKFSSVRRFYAVQDVTQVKNAEDISAHVPSYVENGVFKMSGSSTENFLT--ILTE 516
Query: 504 KDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSA 540
+ + E +W VL
Sbjct: 517 GNEQRVYFYKFLYLQEQLVQQSWSHWDFGVNCRVLCC 553
>gi|323512115|gb|ADX87575.1| tail tubular protein B [Vibrio phage ICP3_2009_A]
Length = 794
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 79/577 (13%), Positives = 166/577 (28%), Gaps = 61/577 (10%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHA-QGVAKSRNLIPLRYGPLVSMPLMQEYRD 59
M + + + G + + D+ ++ QG + G L P +
Sbjct: 1 MALISQSIKNLKGG------ISQQPDILRYSDQGSKQINGFSSEVEG-LQKRPPSVHVKR 53
Query: 60 CRL---DPRSNRVFSFSIPDGGYALLVFGDKKLQIVVV-RSSTKWSPALFGKTYKTPYTF 115
+ + + + F +++ + K A G +Y T +
Sbjct: 54 LTDQFGLGQKPYCHIINRDEVERYAVFFTGSNIRVFDLFTGDEKTVNAPNGLSYVT--SS 111
Query: 116 KDNKSLEYAVFGSTAVFVHKDHP--------PHHLLYIQDGDKISFTFDEIKFLPPPWLG 167
K L ++++ P L + + +
Sbjct: 112 NPRKDLRMVTVADYTFILNRNVSTAQGTTNTPSGLAPFGHFGLVVIRGGQYGRTYRVKVN 171
Query: 168 DGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGA 227
+ + ++ + A D +++G ++ G ++K+ I +
Sbjct: 172 GSVEASFETPLGDQVEHAKQIDIAYIIDQLAAGLINRGWAVTKGSGYFYFSKSGTVIINS 231
Query: 228 YIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYY 287
V D L G D ++ Y +N I I V + + A
Sbjct: 232 LEVEDG-YNGQLAWGIINDVQKTTQLPVYAPNNYI--IRVSGDPTLNQDDYYVKFDASRN 288
Query: 288 VWGDIKDVSKDGRSIS-VAPQSQTLFQAGVSVVS---WFMSAWGE--QEGYPSHV----- 336
VW + + P G W A G+ YPS +
Sbjct: 289 VWTECPAPNIKADYNKDTMPHVLIREADGTFTFKQADWTHRAAGDDDTNPYPSFIGNSIN 348
Query: 337 --TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIH 394
F NRL F + V LS G +++F + D + AV+ S +
Sbjct: 349 DIFFFRNRLGFLSGEN----VILSGSGNYFNFFPESVAVLTDTDP-IDVAVSTNRISILK 403
Query: 395 WMHPFGEGVLVGCDTSLWLLSISLS-KGLSIDFRRVSGSGV-YACPPVSVGDCLVFVCGV 452
+ PF E +++ D + ++LS ++ + V P +G + FV
Sbjct: 404 YAVPFSEELILWSDQAQFVLSSDGGLTPTTVRLDLTTEFEVTEQTRPFGIGRGVYFVSP- 462
Query: 453 GRRIKYISGSTEQGFRFNEITQL------ADHLF---NQRILQLVYQEEPHSIVWVVLEP 503
+ S + + ++TQ+ + H+ + ++ + + +L
Sbjct: 463 ----RAKFSSVRRFYAVQDVTQVKNAEDISAHVPSYVENGVFKMSGSSTENFLT--ILTE 516
Query: 504 KDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSA 540
+ + E +W VL
Sbjct: 517 GNEQRVYFYKFLYLQEQLVQQSWSHWDFGVNCRVLCC 553
>gi|291334275|gb|ADD93938.1| hypothetical protein BTH_I0919 [uncultured marine bacterium
MedDCM-OCT-S08-C235]
Length = 323
Score = 59.9 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 43/148 (29%), Gaps = 16/148 (10%)
Query: 417 SLSKGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKY-ISGSTEQGFRFNEITQL 475
+ + RR + G ++ +FV GR ++ + E + I+ L
Sbjct: 11 NSLTPSNFTARRQTTHGCSHVNVKTLEGGALFVQKHGRAVRELLFTDLELSYSATNISLL 70
Query: 476 ADHLFNQRILQLVYQ---EEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMIS 532
A HL + + Q E P S + G + E W +
Sbjct: 71 ASHLVQTPVDMTILQGTAERPESYAIFINSDGT------AGVFHAVRAEKLAGWTEWKTT 124
Query: 533 DKHYVLSAASFPNDNRGGTSLWMLVALS 560
S + G+ L+ V
Sbjct: 125 TGATFKSIEAV------GSRLFFTVYRD 146
>gi|281416199|ref|YP_003347934.1| tail tubular protein B [Vibrio phage N4]
gi|237701506|gb|ACR16499.1| tail tubular protein B [Vibrio phage N4]
Length = 794
Score = 58.7 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/276 (15%), Positives = 85/276 (30%), Gaps = 36/276 (13%)
Query: 287 YVWGDIKDVSKDGRSISVA-PQSQTLFQAGVSVVS---WFMSAWGE--QEGYPSHV---- 336
VW + + P G W A G+ YPS +
Sbjct: 288 NVWTECPAPNIKADYNKATMPHVLIREADGTFTFKQADWTHRAAGDDDTNPYPSFIGNSI 347
Query: 337 ---TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTI 393
F NRL F + V LS G +++F + D + AV+ S +
Sbjct: 348 NDIFFFRNRLGFLSGEN----VILSGSGNYFNFFPESVAVLTDTDP-IDVAVSTNRISIL 402
Query: 394 HWMHPFGEGVLVGCDTSLWLLSISLS-KGLSIDFRRVSGSGV-YACPPVSVGDCLVFVCG 451
+ PF E +++ D + ++LS ++ + V P +G + FV
Sbjct: 403 KYAVPFSEELILWSDQAQFVLSSDGGLTPTTVRLDLTTEFEVTEQARPFGIGRGVYFVSP 462
Query: 452 VGRRIKYISGSTEQGFRFNEITQL------ADHLF---NQRILQLVYQEEPHSIVWVVLE 502
+ S + + ++TQ+ + H+ + ++ + + +L
Sbjct: 463 -----RAKFSSVRRFYAVQDVTQVKNAEDISAHVPSYVENGVFKMSGSSTENFLT--ILT 515
Query: 503 PKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVL 538
+ + E +W VL
Sbjct: 516 EGNEQRVYFYKFLYLQEQLVQQSWSHWDFGVNCRVL 551
>gi|313892508|ref|ZP_07826097.1| tail tubular protein B family protein [Dialister microaerophilus
UPII 345-E]
gi|313119087|gb|EFR42290.1| tail tubular protein B family protein [Dialister microaerophilus
UPII 345-E]
Length = 807
Score = 57.9 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 63/536 (11%), Positives = 152/536 (28%), Gaps = 84/536 (15%)
Query: 26 DLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNRVFSFSI-----PDGGYA 80
D+ + + + N L P +D + + + +++ +
Sbjct: 19 DILRFPEQLEEQTNGFSTESSGLQKRPPTLFIKDLGVHTTTTQAKNYACHTVDRDEEEKY 78
Query: 81 LLVFGDKKLQIVVVRSS---TKWSPALFGKTYKTPYTFKDNKSLEYAVFGSTAVFVHKDH 137
+++F + + + ++ + + T + L+ V+ +
Sbjct: 79 IMLFTGEDILVYDLKGKQYKVTYEDEKSKQYITT---ENPREELKMVTIADHTFVVNTEV 135
Query: 138 PPHHLLYIQDGDKISFT-------------------------FDEIKFLPPPWLGDGMIS 172
+D ++ + D +
Sbjct: 136 VVK---MSEDKVPWKWSDHEALIHIQKGNYGREYSIKINGKKVAKYTTPDGGEASDIKYT 192
Query: 173 GVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVAD 232
+ + T T D K + + + Y I ++ V+D
Sbjct: 193 DTNYIRDILGNAIQTEEVLYT-DGKYHNQSSGWQVTYYNSAFKIYHPD--YYINSFEVSD 249
Query: 233 DKVYRSLTTGRSGDR-FGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGD 291
++ + + F + T + + + T + + VW +
Sbjct: 250 GFNGEAMHAIKHAVQKFNHLPADAPD---GYTVKVIGDKHTGTDDYYVTFDGKEH-VWKE 305
Query: 292 IKDVSK----DGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGY--PSHV-------TF 338
+ D ++ Q+ + +W G++E PS V
Sbjct: 306 CAKPNISKGFDAETMPHILVRQSDGTFKLKKANWDERKAGDEESNEPPSFVDNTINDIFL 365
Query: 339 HNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHP 398
NRL F + + LS +F++F L D T + AV++ S S +
Sbjct: 366 FRNRLGFLSGEN----IILSRSASFFNFWLASAVELQD-TDTIDLAVSNNSVSILEHAVL 420
Query: 399 FGEGVLVGCDTSLWLLS--ISLSKGLSIDFRRVSGSGVYACPPVSVGDCLVF-VCGV-GR 454
F E +L+ + + ++++ L+ + + S P+ G + F V
Sbjct: 421 FNEELLLFSNNAQFIMTSEGILTPQKASVYFATSFPSATEVVPIKAGRRVYFPVKRALYS 480
Query: 455 RIKYISGSTEQGFRFNEITQLADHL--------------FNQRILQLVYQEEPHSI 496
I+ + E + + H+ N+ I+ + P S+
Sbjct: 481 GIRE-YYTLEDTRGSKDAQDITAHVPSLIPNGIHKLWECTNESIILVASNATPDSL 535
>gi|281416310|ref|YP_003347550.1| tail tubular protein B [Klebsiella phage KP32]
gi|262410429|gb|ACY66694.1| tail tubular protein B [Klebsiella phage KP32]
Length = 791
Score = 57.9 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/314 (15%), Positives = 94/314 (29%), Gaps = 36/314 (11%)
Query: 266 TVLNLSSKTSRESASGAVAPYYVW----GDIKDVSKDGRSISVAPQSQTLFQAGVSVVSW 321
++ +SKT+ + VW G + D ++ + W
Sbjct: 266 KIVGDTSKTADQYYVKYDKSQKVWKETVGWNISIGLDYTTMPWTLVRAADGNFDLGYHDW 325
Query: 322 FMSAWGEQEGYPSH---------VTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEY 372
G+++ P V F NRL F + + +S +++F
Sbjct: 326 KDRRAGDEDTNPQPSFVNSTITDVFFFRNRLGFISGEN----IVMSRTSKYFEFYPPSVA 381
Query: 373 GCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISL-SKGLSIDFRRVSG 431
Y L AV+ S + + F E +L+ D + ++LS + + +
Sbjct: 382 -NYTDDDPLDVAVSHNRVSVLKYAVSFAEELLLWSDEAQFVLSANGVLSAKTAQLDLTTQ 440
Query: 432 SG-VYACPPVSVGDCLVFVCGVGRRIKYISGSTEQGFR----FNEITQLADHLFNQRILQ 486
P +G + + + Q ++T H+ N I
Sbjct: 441 FDVSDRARPYGIGRNIYYASPRSSFTSIMRYYAVQDVSSVKNAEDMT---AHVPNY-IPN 496
Query: 487 LVYQEEPHSI--VWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFP 544
VY VL S + + E +W D V++A
Sbjct: 497 GVYSINGSGTENFACVLTKGAPSKVFIYKFLYMDENIRQQSWSHWDFGDGVEVMAANCI- 555
Query: 545 NDNRGGTSLWMLVA 558
++++ML+
Sbjct: 556 -----NSTMYMLMR 564
>gi|310005669|gb|ADP00057.1| tail tube B [Cyanophage 9515-10a]
Length = 1000
Score = 57.6 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 38/236 (16%), Positives = 77/236 (32%), Gaps = 18/236 (7%)
Query: 225 IGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVA 284
+ + V + + D + A + W + S S
Sbjct: 418 LPSMCKHGYIVQVANSENVDADNYYVKFLADNGSGGSGKWEETVR-PHNFSSGSDPMVKG 476
Query: 285 PYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGE--QEGYPSH------- 335
V+ + + +T A + W G+ +PS
Sbjct: 477 LDPATMPHALVNNRNGTFTFKKLDETTANADNTDNYWKYREVGDDETNPFPSFKGLEIQK 536
Query: 336 VTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHW 395
+ FH NRL F + V +S G +++F + D + V+D + I+
Sbjct: 537 IFFHRNRLGFVAN----EQVVMSRPGDYFNFFVVSAITTSD-DNPIDITVSDIKPAFINH 591
Query: 396 MHPFGEGVLVGCDTSLWLL--SISLSKGLSIDFRRVSGSGV-YACPPVSVGDCLVF 448
+ P +GV++ D ++L + + +++S A PV +G ++F
Sbjct: 592 VLPVQKGVMMFSDNGQFILFTESDIFSPKTARLKKISSYECDDALQPVDMGTSVMF 647
>gi|194473836|ref|YP_002048660.1| tail tubular protein B [Morganella phage MmP1]
gi|194307057|gb|ACF42039.1| tail tubular protein B [Morganella phage MmP1]
Length = 819
Score = 55.6 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 66/524 (12%), Positives = 150/524 (28%), Gaps = 70/524 (13%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M + + + G + + D+ + A N L P + +
Sbjct: 1 MALVSQSTKNLKGG------ISQQPDILRYPDQGAAQVNGWSSETEGLQKRPPLVFVKQL 54
Query: 61 RLDP--RSNRVFSFS-IPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKD 117
S+ + + + L+ F +++ + K P +D
Sbjct: 55 GGKNYLGSDPLVHYINRSEDEKYLVAFSGTGVKVFDMEGKEYTVHNNNAAYLKAPNPKQD 114
Query: 118 NKSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSN 177
+ + V+++ + G + D + + G + +
Sbjct: 115 LRMVTV---ADYTFIVNRNITVKNRSEKSTGGTFNPKSDCLIAVRGSQYGRTIKVTINGV 171
Query: 178 AKLSIS----QADTSTARITSDMKI---FKPLDKGRSIRLGCHPP--------EWAKNTN 222
+++ + I++D I L G++ P E+ T
Sbjct: 172 DRVNFTLHDGAEAWQGRTISTDKVIRYIVDQLTTGKTTEGQGSLPGLGHYGVFEYVTTTP 231
Query: 223 YSIGAYIV-ADDKVYRSLTTGRSGDRFGYSKG---------ATYVKDNNIT--------W 264
G + D VY G+ D + G YV+ +
Sbjct: 232 LPSGWTVKGMDGFVYIKAPAGQQIDTITTTDGYSDQLVYPVTHYVQTTAKLPLNAPDNYY 291
Query: 265 ITVLNLSSKTSRESASGAVAPYYVW----GDIKDVSKDGRSISVAPQSQTLFQAGVSVVS 320
I V+ + T+ + VW G + ++ A ++ V +
Sbjct: 292 IKVVGEAEGTADQYYLKFDKDARVWREAIGWNAILGFQKDTMPHALIRRSDGNFEVKALD 351
Query: 321 WFMSAWGEQEGYP---------SHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGE 371
W G+ + P S V F NRL F + + +S G ++
Sbjct: 352 WSDKEAGDDDTNPDVSLVDRTISDVFFFRNRLGFVSGEN----IVMSRTGRYFKLYPASV 407
Query: 372 YGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISL-SKGLSIDFRRVS 430
D + + + PF E +L+ + + ++L+ +++ +
Sbjct: 408 AAISDDDPIDVAVSYNRVVD-LQFAVPFTEELLLWANGAQFILTAQGILSPKTVELNLST 466
Query: 431 GSGVY-ACPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEIT 473
V+ PV +G + + + S + F +++
Sbjct: 467 QFSVHTGARPVGIGRNVYYASP-----RATFTSINRYFTVQDVS 505
>gi|326536942|ref|YP_004306349.1| tail tubular protein B [Pseudomonas phage phiIBB-PF7A]
gi|318054518|gb|ADV35694.1| tail tubular protein B [Pseudomonas phage phiIBB-PF7A]
Length = 807
Score = 55.6 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 52/337 (15%), Positives = 104/337 (30%), Gaps = 49/337 (14%)
Query: 265 ITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQ---AGVSVVSW 321
L + + S Y G + + I+ ++ A W
Sbjct: 273 EGYLVEITGEATRSGDNYWVRYDGAGRVWKETVKPGIIAGLNRATMPRGLVRAADGQFDW 332
Query: 322 FMSAWG-------EQEGYPSHV-------TFHNNRLLFSGSKGDELSVYLSSFGAFYDFS 367
+ W E PS V F NRL F + V +S +++F
Sbjct: 333 KVLDWNNRGCGDDETNPLPSFVGGTINDVFFFRNRLGFLSGEN----VIMSRSSRYFNFF 388
Query: 368 LDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLL-SISLSKGLSIDF 426
D L AV+ S + + PF E +L+ D + ++L S + +++
Sbjct: 389 PPSVAALSDDDP-LDIAVSHNRISILKYAVPFSEQLLLWSDQAQFVLSSQGILSPKTVEL 447
Query: 427 RRVSGSGVYA-CPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEIT------QLADHL 479
+ V P +G + F + S ++ + +++ ++ H+
Sbjct: 448 NLTTEFDVQDTARPFGIGRGVYF-----SAPRAAYTSLKRYYAVQDVSDVKNAEDVSAHV 502
Query: 480 F---NQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHY 536
R+ + + + +L L + AE +W
Sbjct: 503 PSYIENRVFNIHGSGTENYVT--LLSDGAPGIVYLYKFLYMAEDIAQQSWSHWEFGQNVN 560
Query: 537 VLSAASFPNDNRGGTSLWMLVALSAGEERSFTVRLNL 573
+L AAS G+ +++L+ G R+
Sbjct: 561 ILGAASI------GSYMYLLMDRPEG---IVLERMEF 588
>gi|194100501|ref|YP_002003346.1| gp12 [Yersinia phage Yepe2]
gi|193201234|gb|ACF15715.1| gp12 [Yersinia phage Yepe2]
Length = 792
Score = 55.6 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 77/557 (13%), Positives = 158/557 (28%), Gaps = 79/557 (14%)
Query: 47 PLVSMPLMQEYRDC----RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSP 102
L P + L + Y ++ G +
Sbjct: 41 GLQKRPPFVFTKTIGDQNALGAKPLVHLINRDSAEQYYVVFTGQGVRVFDLNGKEYDVKG 100
Query: 103 ALFGKTYKTPYTFKDNKSLEYAVFGSTAVFVHKD-------HPPHHLLYIQD-------- 147
L + P L V+++ P + L D
Sbjct: 101 DLSYVKVENP-----RDDLRMVTVADYTFIVNRNMVVRPDTTPLYTLKENGDCLINIRGG 155
Query: 148 --GDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKG 205
G ++FT + K GD +++A+ + + + KG
Sbjct: 156 MYGRTLAFTINNTKIAYEIAHGDAPEHSKQTDAQW--------LVKKLAGLARLNVAFKG 207
Query: 206 RSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWI 265
+ G +N I + D + + + S V+ N +
Sbjct: 208 WTFTEGPGYIHVIAPSNSQINSLSTEDGYADQLMNAVMHTSQ---SFSRLPVEAPNGYTV 264
Query: 266 TVLNLSSKTSRESASGAVAPYYVW----GDIKDVSKDGRSISVAPQSQTLFQAGVSVVSW 321
++ +SKTS VW G +G ++ A Q + + W
Sbjct: 265 KIVGDTSKTSDMFYVQYDNLKKVWKEVAGWGVQKGLNGDTMPHALVRQADGSFQMQALPW 324
Query: 322 FMSAWGEQEGYPSH---------VTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEY 372
G+ + P+ V F NRL F + + +S ++
Sbjct: 325 AQRTCGDMDTNPTPSIVDQTINDVFFFRNRLGFLAGEN----IVMSRTSKYFSLFPASVA 380
Query: 373 GCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISL-SKGLSIDFRRVSG 431
D + AV+ S + + PF E +L+ D + ++LS S++ +
Sbjct: 381 NLSDDDP-IDVAVSHNRISILKYAVPFSEELLLWSDQAQFVLSAQGILSPKSVELNLTTE 439
Query: 432 SG-VYACPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQ------LADHLFN--- 481
P VG + F + S + + +++ ++ H+ +
Sbjct: 440 FDVSDRARPFGVGRGVYFASP-----RASYTSLNRYYAVQDVSSVKSAEDMSAHVPSYIP 494
Query: 482 QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAA 541
+ + + I VL S L + E +W + VL+
Sbjct: 495 NGVFSIRGSSTENFIA--VLSSNAPSRIFLYKFLYLNEEISQQSWSHWELGSNVTVLACD 552
Query: 542 SFPNDNRGGTSLWMLVA 558
S G+++++++
Sbjct: 553 SI------GSTMYLVLR 563
>gi|312436378|gb|ADQ83187.1| tail tubular protein B [Yersinia phage Yep-phi]
Length = 792
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 73/552 (13%), Positives = 159/552 (28%), Gaps = 69/552 (12%)
Query: 47 PLVSMPLMQEYRDC----RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSP 102
L P + L + Y ++ G +++ + ++S
Sbjct: 41 GLQKRPPFVFTKTIGDQNALGAKPLVHLINRDSAEQYYVVFTGQG-VRVFDLDGK-EYSV 98
Query: 103 ALFGKTYKTPYTFKDNKSLEYAVFGSTAVFVHKD-------HPPHHLLYIQD-----GDK 150
K D + + V+++ P + L D
Sbjct: 99 KGDLSYVKVGNPRDDLRMVTV---ADYTFIVNRNMVVRPDTTPLYTLKENGDCLINIRGG 155
Query: 151 ISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRL 210
+ + V ++K + +Q + + + KG +
Sbjct: 156 MYGRTLAFTINNTKIAYEIAHGDVPEHSKQTDAQW---LVKKLAGLARLNVAFKGWTFTE 212
Query: 211 GCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNL 270
G +N I + D + + + S V+ N + ++
Sbjct: 213 GPGYIHVIAPSNSQINSLSTEDGYADQLMNAVMHTSQ---SFSRLPVEAPNGYTVKIVGD 269
Query: 271 SSKTSRESASGAVAPYYVW----GDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAW 326
+SKTS VW G +G ++ A Q + + W
Sbjct: 270 TSKTSDMFYVQYDNLKKVWKEVAGWGVQKGLNGDTMPHALVRQADGSFQMQALPWAQRTC 329
Query: 327 GEQEGYPSH---------VTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDP 377
G+ + P+ V F NRL F + + +S ++ D
Sbjct: 330 GDMDTNPTPSIVDQTINDVFFFRNRLGFLAGEN----IVMSRTSKYFSLFPASVANLSDD 385
Query: 378 TKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISL-SKGLSIDFRRVSGSG-VY 435
+ AV+ S + + PF E +L+ D + ++LS S++ +
Sbjct: 386 DP-IDVAVSHNRISILKYAVPFSEELLLWSDQAQFVLSAQGILSPKSVELNLTTEFDVSD 444
Query: 436 ACPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQ------LADHLFN---QRILQ 486
P VG + F + S + + +++ ++ H+ + +
Sbjct: 445 RARPFGVGRGVYFASP-----RASYTSLNRYYAVQDVSSVKSAEDMSAHVPSYIPNGVFS 499
Query: 487 LVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPND 546
+ + I VL S L + E +W + VL+ S
Sbjct: 500 IRGSSTENFI--SVLSSNAPSRIFLYKFLYLNEEIAQQSWSHWELGSNVTVLACDSI--- 554
Query: 547 NRGGTSLWMLVA 558
G+++++++
Sbjct: 555 ---GSTMYLVLR 563
>gi|194100452|ref|YP_002003825.1| gp12 [Klebsiella phage K11]
gi|193201391|gb|ACF15869.1| gp12 [Klebsiella phage K11]
Length = 791
Score = 54.5 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/314 (15%), Positives = 95/314 (30%), Gaps = 36/314 (11%)
Query: 266 TVLNLSSKTSRESASGAVAPYYVW----GDIKDVSKDGRSISVAPQSQTLFQAGVSVVSW 321
++ +SKT+ + A VW G V + ++ + W
Sbjct: 266 KIVGDTSKTADQYYVKYDASQKVWKETVGWNISVGLEYHTMPWTLVRAADGNFDLGYHEW 325
Query: 322 FMSAWGEQEGYPSH---------VTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEY 372
G+ + P V F NRL F + + LS +++F
Sbjct: 326 RDRRAGDDDTNPQPSFVNSTITDVFFFRNRLGFISGEN----IVLSRTSKYFEFYPPSVA 381
Query: 373 GCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISL-SKGLSIDFRRVSG 431
Y L AV+ S + + F E +L+ D + ++LS + + +
Sbjct: 382 -NYTDDDPLDVAVSHNRVSVLKYAVSFAEELLLWSDEAQFVLSANGVLSAKTAQLDLTTQ 440
Query: 432 SGVYA-CPPVSVGDCLVFVCGVGRRIKYISGSTEQGFR----FNEITQLADHLFNQRILQ 486
V P +G + + + Q ++T H+ N I
Sbjct: 441 FDVSDRARPYGIGRNIYYASPRSSFTSIMRYYAVQDVSSVKNAEDMT---AHVPNY-IPN 496
Query: 487 LVYQEEPHSI--VWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFP 544
VY VL S + + E +W D V++A
Sbjct: 497 GVYSINGSGTENFACVLTKGAPSKVFIYKFLYMDENIRQQSWSHWDFGDGVEVMAANCI- 555
Query: 545 NDNRGGTSLWMLVA 558
+++++L+
Sbjct: 556 -----NSTMYLLMR 564
>gi|119637778|ref|YP_919014.1| Tubular tail protein B [Yersinia phage Berlin]
gi|119391809|emb|CAJ70682.1| hypothetical protein [Yersinia phage Berlin]
Length = 792
Score = 54.1 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 79/557 (14%), Positives = 159/557 (28%), Gaps = 79/557 (14%)
Query: 47 PLVSMPLMQEYRDC----RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSP 102
L P + L + Y ++ G +
Sbjct: 41 GLQKRPPFVFTKTIGDQNALGAKPLVHLINRDSAEQYYVVFTGQGVRVFDLNGKEYDVKG 100
Query: 103 ALFGKTYKTPYTFKDNKSLEYAVFGSTAVFVHKD-------HPPHHLLYIQD-------- 147
L + P L V+++ P + L D
Sbjct: 101 DLSYVKVENP-----RDDLRMVTVADYTFIVNRNMVVRPDTTPLYTLKENGDCLINIRGG 155
Query: 148 --GDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKG 205
G ++FT + K GD +++A+ + + + KG
Sbjct: 156 MYGRTLAFTINNTKIAYEIAHGDAPEHSKQTDAQW--------LVKKLAGLARLNVAFKG 207
Query: 206 RSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWI 265
+ G +N I + D + + + S V+ N +
Sbjct: 208 WTFTEGPGYIHVIAPSNSQINSLSTEDGYADQLMNAVMHTSQ---SFSRLPVEAPNGYTV 264
Query: 266 TVLNLSSKTSRESASGAVAPYYVW----GDIKDVSKDGRSISVAPQSQTLFQAGVSVVSW 321
++ +SKTS VW G +G ++ A Q + V+ W
Sbjct: 265 KIVGDTSKTSDMFYVQYDNMKKVWKEVAGWGVQKGLNGGTMPHALVRQADGSFQMQVLPW 324
Query: 322 FMSAWGEQEGYPSH---------VTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEY 372
G+ + P+ V F NRL F + + +S ++
Sbjct: 325 TQRTCGDMDTNPTPSIVDQKINDVFFFRNRLGFLAGEN----IVMSRTSKYFSLFPASVA 380
Query: 373 GCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISL-SKGLSIDFRRVSG 431
D + AV+ S + + PF E +L+ D + ++LS S++ +
Sbjct: 381 NLSDDDP-IDVAVSHNRISILKYAVPFSEELLLWSDQAQFVLSAQGILSPKSVELNLTTE 439
Query: 432 SG-VYACPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQ------LADHLFN--- 481
P VG + F + S + + +++ ++ H+ N
Sbjct: 440 FDVSDRARPFGVGRGVYFASP-----RASYTSLNRYYAVQDVSSVKSAEDMSAHVPNYIP 494
Query: 482 QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAA 541
+ + + I VL S L + E +W + VL+
Sbjct: 495 NGVFSIRGSSTENFI--SVLSSNAPSRIFLYKFLYLNEEIAQQSWSHWELGSNVTVLACD 552
Query: 542 SFPNDNRGGTSLWMLVA 558
S G+++++++
Sbjct: 553 SI------GSTMYLVLR 563
>gi|212671415|ref|YP_002308415.1| tubular tail protein B [Kluyvera phage Kvp1]
gi|211997259|gb|ACJ14576.1| tubular tail protein B [Kluyvera phage Kvp1]
Length = 793
Score = 52.9 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 75/552 (13%), Positives = 159/552 (28%), Gaps = 68/552 (12%)
Query: 47 PLVSMP---LMQEYRDCRLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPA 103
L P + D + V + +VF +++ +
Sbjct: 41 GLQKRPPFIFTKTIGDAGFLGGAPLVHLINRDSIEQYYVVFTGSGVKVFDLNG------R 94
Query: 104 LFGKTYKTPYTFKDNK--SLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDE---I 158
+ T Y N L V++ ++ + D I
Sbjct: 95 EYAVHGDTSYANCANPRDDLRMVTVADYTFVVNRS----KVVQANKDPIYTIREDGECLI 150
Query: 159 KFLPPPWLGDGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWA 218
+ I +A I+ + +D + G + W
Sbjct: 151 NIRGGQYGRTFTIRLNGISASYKIADGANAPEVEQTDAQWLVKKMAQLLREGGANTWGWT 210
Query: 219 KNTNY-SIGAYIVADDKVYR-SLTTGRSGDRFGYSKGATYV------KDNNITWITVLNL 270
N I D+ +++ + G G + + N + ++
Sbjct: 211 VNEGAGYIHVVSRGDEPIWKVEVEDGYGGQLMSAVMHTSQSFSKLPAEAPNGYSVQIVGD 270
Query: 271 SSKTSRESASGAVAPYYVW----GDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAW 326
+SKTS A VW G + ++ A Q+ + + W
Sbjct: 271 TSKTSDAFYVQYDAARKVWKEVAGWGVQKGLNNGTMPHALIRQSDGSFKMEALPWDERKC 330
Query: 327 GEQEGYP---------SHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDP 377
G+ P + V F NRL F + + +S ++ D
Sbjct: 331 GDMNTNPDPSIVDQKINDVFFFRNRLGFLAGEN----IVMSRTSKYFSLFPASVANLSDD 386
Query: 378 TKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISL-SKGLSIDFRRVSGSGVYA 436
+ AV+ ST+ + PF E +L+ D + ++LS S S++ + V
Sbjct: 387 DP-IDVAVSHNRISTLKYAVPFSEELLLWSDQAQFVLSASGILSPKSVELNLTTEFDVSD 445
Query: 437 -CPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQ------LADHLFN---QRILQ 486
P +G + F + S + + +++ ++ H+ + +
Sbjct: 446 KARPYGIGRGVYFASP-----RASYTSINRYYAVQDVSSVKSAEDMSAHVPSYIPNGVFS 500
Query: 487 LVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPND 546
+ + + VL S + + E +W + VL+ S
Sbjct: 501 IRGSGTENFV--SVLSANAPSKIFMYKFLYLNEENVQQSWSHWELGSNVTVLACDSI--- 555
Query: 547 NRGGTSLWMLVA 558
G+++++L+
Sbjct: 556 ---GSTMYLLLR 564
>gi|326424995|ref|YP_004286217.1| virion structural protein [Pseudomonas phage phi15]
gi|325048399|emb|CBZ42012.1| virion structural protein [Pseudomonas phage phi15]
Length = 793
Score = 52.9 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 78/628 (12%), Positives = 168/628 (26%), Gaps = 95/628 (15%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEY--- 57
M ++ + + G + + D+ + A+ N L P +
Sbjct: 1 MPLSSQSIKNLKGG------ISQQPDVLRYPNQGAQQINGWSSETKGLQKRPPLVFIKRL 54
Query: 58 RDCRLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKD 117
+ V + L+F + L I + + + + T +D
Sbjct: 55 AESGHFGTKPLVHLINRDAFEQYQLIFHNGALTIFDLAGNN-YPVSGSLSYIATANPRED 113
Query: 118 NKSLEYAVFGSTAV----------FVHKDHPPHH----LLYIQDGDKISFTFDEIKFLPP 163
+ L A + H +P + + +
Sbjct: 114 LRLLTVADYTFILNRTKTVEMSSELTHTGYPALNSRALVSCRGGQYGRTLRIRANGVELA 173
Query: 164 PWLGDGMISGVKSNAKLSISQADTSTARI---------TSDMKIFKPLDKGRSIRLGCHP 214
+ ++ + ++ D T+ + G
Sbjct: 174 SYELPDGLAENNTELSKEVAAMDAQAIVKELVKRVNAGTATHGFSAAEGPSHLVIYGNGQ 233
Query: 215 PEWAKNTNYSIGAYIVADDKVYRSLTT-----GRSGDRFGYSKGATYVKDNN-ITWITVL 268
P T +++ TT +G + A+ DN + +
Sbjct: 234 PINNIYTEDGYADQLISGLIYQVQTTTKLPITAPAGYLVEITGEASRSGDNYWVRYDGAA 293
Query: 269 NLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGE 328
+ +T + + P ++ A Q ++W G+
Sbjct: 294 KVWKETVKPGIISGINP--------------GTMPHALIRQADGTFSFGPLTWAKRTAGD 339
Query: 329 --QEGYPSHV-------TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTK 379
PS V F NRL F + + +S ++ D
Sbjct: 340 DETNPMPSLVDNKLNDVFFFRNRLGFLSGEN----IIMSKTAKYFQLFPSSVAASADDDP 395
Query: 380 ALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISL-SKGLSIDFRRVSGSGVY-AC 437
+ AV+ S + + PF E +L+ D + + L+ S + + V A
Sbjct: 396 -IDVAVSHSRISILKYAVPFSEQLLLWSDQAQFTLTSSGVLSAKTAQLDLTTEFDVLDAA 454
Query: 438 PPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQ------LADHLFN---QRILQLV 488
P +G + F R + +++ ++ H+ ++ +
Sbjct: 455 RPYGLGRGVYFAAPRARFCSIKRY-----YAVADVSNVKNAEDVSGHVPTYIPNKVHNVN 509
Query: 489 YQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNR 548
+ + VL D S + + E +W H K +LS S
Sbjct: 510 GSGTENFV--SVLTDGDPSKVFIYKFLYQDENLAQQSWS-HWTFGKCKILSMFSI----- 561
Query: 549 GGTSLWMLVALSAGEERSFTVRLNLLDD 576
G+ + ++ + G RL +D
Sbjct: 562 -GSYTYTIMDRAEGV---VLERLEFTND 585
>gi|310005781|gb|ADP00167.1| tail tube protein B [Cyanophage NATL2A-133]
Length = 985
Score = 52.6 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 64/166 (38%), Gaps = 17/166 (10%)
Query: 295 VSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGE--QEGYPSH-------VTFHNNRLLF 345
V+ + + +T A + W G+ +PS + FH NRL
Sbjct: 467 VNNRNGTFTFKKLDETTANADSNDNYWKYREVGDDITNPFPSFKGLKISKIFFHRNRLGL 526
Query: 346 SGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLV 405
+ V +S G +++F + D + V+D + I+ + P +GV++
Sbjct: 527 IAN----EQVVMSRPGDYFNFQIVSAITTSD-DNPVDITVSDIKPAFINHVLPIQKGVMM 581
Query: 406 GCDTSLWLL--SISLSKGLSIDFRRVSGSGVY-ACPPVSVGDCLVF 448
D +LL + + +++S Y A P+ +G ++F
Sbjct: 582 FSDNGQFLLFTESDIFSPKTARLKKLSSYETYPALDPIDMGTSVMF 627
Score = 40.6 bits (93), Expect = 0.75, Method: Composition-based stats.
Identities = 27/325 (8%), Positives = 75/325 (23%), Gaps = 20/325 (6%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M +F G + + D + + N +P L+ P + +
Sbjct: 1 MPAINQRIPNFLGG------VSQQPDTIKYPGQLRVCDNAVPDVTFGLMKRPPGEFVKTL 54
Query: 61 RLDPRSNRVFSFSIPDGGYALLVF-------GDKKLQIVVVRSSTKWSPALFGKTYKTPY 113
+ L+ G K ++I + + + S Y
Sbjct: 55 TNANADGYWYEILRDGDEKYLVQMTALSSYSGTKPIRIWNLLTGVEQSLTNSNGDSLFSY 114
Query: 114 TFKDNKSLEYA-VFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMIS 172
+ ++ YA + H D + + + + + ++
Sbjct: 115 MEQSGTTIPYATQTIQDYTIISNPHKTVTTTGTTDAPLANGNYAFARLDTIAYNTEYILY 174
Query: 173 GVKSNAKLSISQADTSTARITSDMKIFKPLDKGRS-IRLGCHPPEWAKNTNYSIGAYIVA 231
+ + T+ + D + G ++ + + ++
Sbjct: 175 TGSTAPAANKYYRVTALSVDKGTNDGNTWDDTNKDGRYAGLAQFSFSDSLCEDVEGHVTV 234
Query: 232 DDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGD 291
+ Y T G T +++ +
Sbjct: 235 NAASYVDSNTAN-----YDGGGTAQSNFLGYTQNYKTRYTAQIVLKDGGLIKTGSESTAL 289
Query: 292 IKDVSKDGRSISVAPQSQTLFQAGV 316
+ IS + + + +
Sbjct: 290 SRHHDITIEGISYRVKVKAVEEVDT 314
>gi|148724484|ref|YP_001285450.1| tail tube B [Cyanophage Syn5]
gi|145588129|gb|ABP87948.1| tail tube B [Synechococcus phage Syn5]
Length = 905
Score = 52.6 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 58/396 (14%), Positives = 119/396 (30%), Gaps = 64/396 (16%)
Query: 176 SNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKV 235
+ L I Q + + + G I + ++++G V
Sbjct: 297 TAGTLDIGQITAGLVNSVNLISNYSAQAVGNVIEIER-----TDGRDFNLG---VRGGAT 348
Query: 236 YRSLTTGR-SGDRFGYSKGATYVK--------DNNITWITVLNLSSKTSRESASGAVAPY 286
R++T + + + G + +N + + S SG+
Sbjct: 349 NRAMTAIKGTANSIVDLPGQCFDGFELKVINTENAESDDYYVVFRSAAEGIPGSGSWEET 408
Query: 287 YVWGDIKDVSKDGRSISVAPQSQTLF-----QAGVSVVSWFMSAWGE--QEGYPSHV--- 336
G + + ++ Q+ F ++ W G+ PS V
Sbjct: 409 VAPGIERGFNTSTMPHALIRQADGNFTLEALNDEGTITGWAQREVGDDDTNPKPSFVGRG 468
Query: 337 ----TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSAST 392
F+NNRL F V +S G +++F + D + + +
Sbjct: 469 ISDMFFYNNRLGFLSEDA----VIMSQPGDYFNFFVTSAITISDSDP-IDVTASSTKPAI 523
Query: 393 IHWMHPFGEGVLVGCDTSLWLLSISLSKGLSIDFRRVSGSGVY----ACPPVSVGDCLVF 448
+ +G+++ + S +LL S S +++ Y PVS G + F
Sbjct: 524 LRAAIGAPKGLILFAENSQFLL-ASQEVVFSTATIKLTEISDYFYRSLAKPVSTGVSIAF 582
Query: 449 VCGVG--RRIKYISGSTEQGF-RFNEITQLADHLFNQRILQLVYQEEPHSIVWVV----- 500
V +I +S + + +IT++ + P + W V
Sbjct: 583 VSEADTYSKIFEMSIDSVDNRPQVADITRIVP------------EYVPTGLTWSVSTPNN 630
Query: 501 --LEPKDNSFPRLLGCRFSA-EGEGDFAWHTHMISD 533
+ DNS + F+ W ++
Sbjct: 631 SMMLFGDNSNTAYIFKFFNQGNERQVAGWSKWILPG 666
>gi|291334274|gb|ADD93937.1| hypothetical protein [uncultured marine bacterium
MedDCM-OCT-S08-C235]
Length = 119
Score = 51.8 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 5/111 (4%)
Query: 259 DNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQ-----TLFQ 313
D + I+ N + + +G+ + D + G + + + +
Sbjct: 6 DGSTIVISGANTVDTITASNINGSRTITVLNEDSYSFTAGGSANADNTDAGGGVSIFVTS 65
Query: 314 AGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFY 364
W + GYP+ TFH+ RL F GS V+ S F
Sbjct: 66 PNQPNSQWQEQTYSTIRGYPASATFHDGRLWFGGSSSLPDWVWASKVDEFL 116
>gi|311875239|emb|CBX44498.1| putative tail tubular protein B [Erwinia phage phiEa1H]
gi|311875360|emb|CBX45101.1| putative tail tubular protein B protein [Erwinia phage phiEa100]
Length = 806
Score = 51.8 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 68/595 (11%), Positives = 152/595 (25%), Gaps = 82/595 (13%)
Query: 39 NLIPLRYGPLVSMPLMQEYRDCRLDPRSNRVFSFSI--PDGGYALLVFGDKKLQIVVVRS 96
N +P L + + +N + D ++ ++ ++
Sbjct: 32 NAVPNVVDGLKTRMGSKHLARILNSLDANSLIHHYKRGDDAEEYFVILQPGQVPVIFTVG 91
Query: 97 STKWSPALFGKTYKTPYTFKDNKS--LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFT 154
P + T + + G +++ P ++ +
Sbjct: 92 GL-ACPVNTQGSAATYLSSSSLPRETTQLMTIGDYTFVLNRKMPVQ------ARGDVTPS 144
Query: 155 FDEIKFLPPPWLGDGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHP 214
D + + + N +++ T+ + K D R+ +
Sbjct: 145 LDNKGLVYVAYANFSFTYQILINGQVAAEHK-------TASSEDVKNEDLVRTDYVAGKL 197
Query: 215 PEWAKNTNYSIGAYIVADD------------KVYRSLTTGRSGD-----RFGYSKGATYV 257
E + S + + D + G G R + T
Sbjct: 198 LENFNSRTASFPGFSMYQDGNVLVVDNSNGANYALTTVDGADGQDLVAIRHKVTNLDTLP 257
Query: 258 KDNNITWITVLNLSS-------KTSRESASGAVAPYYVW-GDIKDVSKDGRSISVAPQSQ 309
+ + + + ES G+ + + ++ +
Sbjct: 258 NRAPVGYKVQVWPTGSKPESRYWLQAESQDGSKVTWVETIAPGVRKGWNAATMPHVLVRE 317
Query: 310 TLFQAGVSVVSWFMSAWGE-------QEGYPSHVT-----------FHNNRLLFSGSKGD 351
+L G + ++ W + +PS + NRL+
Sbjct: 318 SLNANGSANFTYRPGEWEDRDVGDDLTNDFPSLLNDSSPQPISSMLMVQNRLML----TS 373
Query: 352 ELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHW-MHPFGEGVLVGCDTS 410
+V S F+DF D I W G+ VL D
Sbjct: 374 GEAVVASRTSRFFDFFRYTVLATVDTDP-FDVFADIEEVYNIRWSAQMDGDVVLFTSDQQ 432
Query: 411 LWLLSISLSKGLSIDFRRVSGSG-VYACPPVSVGDCLVFV--CGVGRRIKYIS-GSTEQG 466
L S R V+ P GD ++F G I+ S
Sbjct: 433 FTLPGDKPLTPTSAVIRPVTQFKMTPGVKPAPSGDSILFAFDQGSYSGIREFFTDSYSDT 492
Query: 467 FRFNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAW 526
+ T D ++L+L + ++ D + + + + AW
Sbjct: 493 KKAQPATSHVDKYIRGKVLELSASSSFNRA--FIITSSDRNILYVYDWLYEGTEKVQNAW 550
Query: 527 HTHMISDKHYVLSAASFPNDNRGGTSLWMLVAL---SAGEERSFTVRLNLLDDFK 578
H + + + L++++ S G + +++ D+ +
Sbjct: 551 HKWSFPAGTVLHAVS------YSNEKLYLVLTRTNTSGGVAGVYIEVMDMGDELE 599
>gi|125999999|ref|YP_001039670.1| tail tubular protein B-like protein [Erwinia amylovora phage
Era103]
gi|121621855|gb|ABM63429.1| tail tubular protein B-like protein [Enterobacteria phage Era103]
Length = 806
Score = 51.8 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 68/595 (11%), Positives = 152/595 (25%), Gaps = 82/595 (13%)
Query: 39 NLIPLRYGPLVSMPLMQEYRDCRLDPRSNRVFSFSI--PDGGYALLVFGDKKLQIVVVRS 96
N +P L + + +N + D ++ ++ ++
Sbjct: 32 NAVPNVVDGLKTRMGSKHLARILNSLDANSLIHHYKRGDDAEEYFVILQPGQVPVIFTVG 91
Query: 97 STKWSPALFGKTYKTPYTFKDNKS--LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFT 154
P + T + + G +++ P ++ +
Sbjct: 92 GL-ACPVNTQGSAATYLSSSSLPRETTQLMTIGDYTFVLNRKMPVQ------ARGDVTPS 144
Query: 155 FDEIKFLPPPWLGDGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHP 214
D + + + N +++ T+ + K D R+ +
Sbjct: 145 LDNKGLVYVAYANFSFTYQILINGQVAAEHK-------TASSEDVKNEDLVRTDYVAGKL 197
Query: 215 PEWAKNTNYSIGAYIVADD------------KVYRSLTTGRSGD-----RFGYSKGATYV 257
E + S + + D + G G R + T
Sbjct: 198 LENFNSRTASFPGFSMYQDGNVLVVDNSNGANYALTTVDGADGQDLVAIRHKVTNLDTLP 257
Query: 258 KDNNITWITVLNLSS-------KTSRESASGAVAPYYVW-GDIKDVSKDGRSISVAPQSQ 309
+ + + + ES G+ + + ++ +
Sbjct: 258 NRAPVGYKVQVWPTGSKPESRYWLQAESQDGSKVTWVETIAPGVRKGWNAATMPHVLVRE 317
Query: 310 TLFQAGVSVVSWFMSAWGE-------QEGYPSHVT-----------FHNNRLLFSGSKGD 351
+L G + ++ W + +PS + NRL+
Sbjct: 318 SLNANGSANFTYRPGEWEDRDVGDDLTNDFPSLLNDSSPQPISSMLMVQNRLML----TS 373
Query: 352 ELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHW-MHPFGEGVLVGCDTS 410
+V S F+DF D I W G+ VL D
Sbjct: 374 GEAVVASRTSRFFDFFRYTVLATVDTDP-FDVFADIEEVYNIRWSAQMDGDVVLFTSDQQ 432
Query: 411 LWLLSISLSKGLSIDFRRVSGSG-VYACPPVSVGDCLVFV--CGVGRRIKYIS-GSTEQG 466
L S R V+ P GD ++F G I+ S
Sbjct: 433 FTLPGDKPLTPTSAVIRPVTQFKMTPGVKPAPSGDSILFAFDQGSYSGIREFFTDSYSDT 492
Query: 467 FRFNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAW 526
+ T D ++L+L + ++ D + + + + AW
Sbjct: 493 KKAQPATSHVDKYIRGKVLELSASSSFNRA--FIITSPDRNILYVYDWLYEGTEKVQNAW 550
Query: 527 HTHMISDKHYVLSAASFPNDNRGGTSLWMLVAL---SAGEERSFTVRLNLLDDFK 578
H + + + L++++ S G + +++ D+ +
Sbjct: 551 HKWSFPAGTVLHAVS------YSNEKLYLVLTRTNTSGGVAGVYIEVMDMGDELE 599
>gi|194100345|ref|YP_002003775.1| gp12 [Enterobacteria phage EcoDS1]
gi|193201340|gb|ACF15819.1| gp12 [Enterobacteria phage EcoDS1]
Length = 785
Score = 51.0 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 67/434 (15%), Positives = 120/434 (27%), Gaps = 38/434 (8%)
Query: 47 PLVSMPLMQEYRDCRLDPRSNRVFSFSIPDGG-YALLVFGDKKLQIVVVRSSTKWSPALF 105
L P R +D SN F D +VF +Q+V + + +
Sbjct: 41 GLQKRPPTVFKRRLNIDVGSNPKFHLINRDEQEQYYIVFNGSNIQVVDLSGN------QY 94
Query: 106 GKTYKTPYTFKDNK--SLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPP 163
+ + Y N + V++ I
Sbjct: 95 SVSGEVDYVKSSNPRDDIRVVTVADYTFIVNRKVVVKGGSEKSHSGYNRKARALINLRGG 154
Query: 164 PW---LGDGMISGVKSNAKLSI-------SQADTSTARITSDMKIFKPLDKGRSIRLGCH 213
+ L G+ GVK + KL + A + + + LG
Sbjct: 155 QYGRTLKVGINGGVKVSHKLPAGNDAENDPPKVDAQAIGAALRDLLVAAYPTFTFDLGSG 214
Query: 214 PPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSK 273
+ I + D + ++ + I N S+
Sbjct: 215 FLLITAPSGTDINSVETEDGYANQLISPVLDTVQTISKLPLAAPNGYIIKIQGETNSSAD 274
Query: 274 TSRESASGAVAPYYVW---GDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQE 330
+ G + ++ QS F+ S S +
Sbjct: 275 EYYVMYDSNTKTWKETVEPGVVTGFDNTTMPHALVRQSDGSFEFKTLDWSKRGSGNDDTN 334
Query: 331 GYPSHV-------TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTT 383
PS V F+ NRL F + V +S +++ F D +
Sbjct: 335 PMPSFVDATINDVFFYRNRLGFLSGEN----VIMSRSASYFAFFPKSAATLSDDDP-IDV 389
Query: 384 AVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSIS---LSKGLSIDFRRVSGSGVYACPPV 440
AV+ S + + PF E +L+ D ++++ S +K + +D G A P
Sbjct: 390 AVSHPRISILKYAVPFSEQLLLWSDEVQFVMTSSGVLTAKSIQLDVGSEFSLGDNA-RPF 448
Query: 441 SVGDCLVFVCGVGR 454
+VG + F G
Sbjct: 449 AVGRSVFFSAPRGS 462
>gi|194100290|ref|YP_002003488.1| gp12 [Enterobacteria phage BA14]
gi|193201285|gb|ACF15765.1| gp12 [Enterobacteria phage BA14]
Length = 795
Score = 50.6 bits (119), Expect = 6e-04, Method: Composition-based stats.
Identities = 49/317 (15%), Positives = 104/317 (32%), Gaps = 42/317 (13%)
Query: 266 TVLNLSSKTSRESASGAVAPYYVW----GDIKDVSKDGRSISVAPQSQTLFQAGVSVVSW 321
++ +SKTS + VW G +G ++ A Q+ + + W
Sbjct: 268 KIVGDTSKTSDQFYVQYDNVKKVWKEVAGWGVQKGLNGGTMPHALVRQSDGSFQMQALPW 327
Query: 322 FMSAWGEQEGYPSH---------VTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEY 372
G+ + P+ V F NRL F + + +S ++
Sbjct: 328 SQRTCGDMDTNPTPSIVDQTINDVFFFRNRLGFLAGEN----IVMSRTSKYFSLFPASVA 383
Query: 373 GCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISL-SKGLSIDFRRVSG 431
D + AV+ S + + PF E +L+ D + ++LS S++ +
Sbjct: 384 NLSDDDP-IDVAVSHNRISILKYAVPFSEELLLWSDQAQFVLSAQGILSPKSVELNLTTE 442
Query: 432 SG-VYACPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQ------LADHLFN--- 481
P VG + F + S + + +++ ++ H+ +
Sbjct: 443 FDVSDRARPFGVGRGVYFASP-----RASYTSLNRYYAVQDVSSVKSAEDMSAHVPSYIP 497
Query: 482 QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAA 541
+ + + I VL S L + E +W + VL+
Sbjct: 498 NGVFSIRGSGTENFI--SVLSANAPSKIFLYKFLYLNEEIAQQSWSHWELGSNVTVLACD 555
Query: 542 SFPNDNRGGTSLWMLVA 558
S G+++++++
Sbjct: 556 SI------GSTMYLVLR 566
>gi|326536137|ref|YP_004300571.1| gp12 [Enterobacteria phage 285P]
gi|256861526|gb|ACV32482.1| gp12 [Enterobacteria phage 285P]
Length = 795
Score = 50.6 bits (119), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/317 (15%), Positives = 104/317 (32%), Gaps = 42/317 (13%)
Query: 266 TVLNLSSKTSRESASGAVAPYYVW----GDIKDVSKDGRSISVAPQSQTLFQAGVSVVSW 321
++ +SKTS + VW G +G ++ A Q+ + + W
Sbjct: 268 KIVGDTSKTSDQFYVQYDNVKKVWKEVAGWGVQKGLNGGTMPHALVRQSDGSFQMQALPW 327
Query: 322 FMSAWGEQEGYPSH---------VTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEY 372
G+ + P+ V F NRL F + + +S ++
Sbjct: 328 SQRTCGDMDTNPTPSIVDQSINDVFFFRNRLGFLAGEN----IVMSRTSKYFSLFPASVA 383
Query: 373 GCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISL-SKGLSIDFRRVSG 431
D + AV+ S + + PF E +L+ D + ++LS S++ +
Sbjct: 384 NLSDDDP-IDVAVSHNRISILKYAVPFSEELLLWSDQAQFVLSAQGILSPKSVELNLTTE 442
Query: 432 SG-VYACPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQ------LADHLFN--- 481
P VG + F + S + + +++ ++ H+ +
Sbjct: 443 FDVSDRARPFGVGRGVYFASP-----RASYTSLNRYYAVQDVSSVKSAEDMSAHVPSYIP 497
Query: 482 QRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAA 541
+ + + I VL S L + E +W + VL+
Sbjct: 498 NGVFSIRGSGTENFI--SVLSANAPSKIFLYKFLYLNEEIAQQSWSHWELGSNVTVLACD 555
Query: 542 SFPNDNRGGTSLWMLVA 558
S G+++++++
Sbjct: 556 SI------GSTMYLVLR 566
>gi|148747829|ref|YP_001285795.1| tail tubular protein B [Phormidium phage Pf-WMP3]
gi|146230062|gb|ABQ12470.1| tail tubular protein B [Phormidium phage Pf-WMP3]
Length = 1027
Score = 50.6 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 53/367 (14%), Positives = 106/367 (28%), Gaps = 35/367 (9%)
Query: 128 STAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWL---GDGMISGVKSNAKL-SIS 183
T + +P LLY ++TF GDG + V ++A L +
Sbjct: 262 DTIQGTYGRYPM--LLYKTATFNDTYTFSNTGQPANADSYGWGDGSVYNVGASAYLNTSP 319
Query: 184 QADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTG- 242
T T + + + R L + A N + A Y S G
Sbjct: 320 FFATFGDTRTPTPQPPETVHLLRQRELRFNYGNGATGANLRVTVDGTALSANYSSTVAGT 379
Query: 243 RSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSI 302
+ G +++ + + + S + AV V D + G +
Sbjct: 380 NRAYALYKADGTLCTSASDLAY-YIAFTGATPLGISPTAAVTITNV-----DRTYIGSAA 433
Query: 303 SVAPQSQTLFQAGVSVVSWFMSAWG--EQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSF 360
+ Q+ + G + + W +P T + +RL+ G D V S+
Sbjct: 434 T---QTDNAYVQGGYFKVYGLGLWANYGTGQFPRIATVYQSRLVLGGFTNDPTRVVFSAT 490
Query: 361 GA-------FYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWL 413
G + F + + D + + + + + + V +
Sbjct: 491 GDTVEGGVKYNFFQVTDDLDGLDSDPFDLVVSSSQADDYVTGLVEWQSSLFVLTRRA--T 548
Query: 414 LSISLSKGLSIDFRRVSGSGVY--ACPP---VSVGDCLVFVCGVGRRIKYISGSTEQG-F 467
+ RR P V + ++ G + ++ E G +
Sbjct: 549 FRANGGDATISPARRFVNYISSLGLVNPFSVVRTDTAVFYLSDSG--VFNLTPRVEDGEY 606
Query: 468 RFNEITQ 474
+ E +
Sbjct: 607 QAIEKSI 613
>gi|18640503|ref|NP_570344.1| tail protein A [Synechococcus phage P60]
gi|18478733|gb|AAL73282.1| tail protein A [Synechococcus phage P60]
Length = 680
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 42/353 (11%), Positives = 93/353 (26%), Gaps = 46/353 (13%)
Query: 18 PRLLQS---RKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNRVFSFSI 74
P LL + D V ++RN+ + P + P+ +
Sbjct: 9 PNLLGGISQQPDPLKLPGQVKQARNVQLDPTFGALKRPGTELIMQVTGIPKRAKWIPIMR 68
Query: 75 PD-GGYALLVF-------GDKKLQIVVVRSSTKWSPALFGKTYK--TPYTFKDNKSLEYA 124
Y + ++ GD ++++ +++ + + + G + P D +++
Sbjct: 69 DAREHYYVAIYREGANESGDLRIRVFDLKAGVERAVSFVGGEVEEYFPGDETDWEAIRSL 128
Query: 125 VFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQ 184
G + + P SF+ + G G V + S Q
Sbjct: 129 TIGDYTFLSNPNVQP-------TTWSRSFSRRPEGLVTIGAAGYGTSYIVDFATEDSGQQ 181
Query: 185 ADTSTARITSDMKIFKPLDKGRSIRLGCHPPEW----------AKNTNYSIGAYIVADDK 234
+ + + K D W + + +
Sbjct: 182 RRWAVQEMQAPKTKRKKGDGSPDEAGETTVNNWNGTGLSFRVKVEARAFLVDDGEEYGHN 241
Query: 235 VYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKT--------------SRESAS 280
+T G+ V + W + ++ +S
Sbjct: 242 YIPYVTLLTPGNNTSPFPDTIRVDVSGEGWDIKVTKQIQSKVYANLGTAQFTTPVDQSGG 301
Query: 281 GAVAPYYVWGDIKDVSKDGRSISVAPQS--QTLFQAGVSVVSWFMSAWGEQEG 331
GA V G ++ G + + + + + + MSA G G
Sbjct: 302 GASTSDIVTGLSAAINGLGTFTAESIGNVIRVRYSDPTRTDEFTMSARGGTSG 354
Score = 44.8 bits (104), Expect = 0.034, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 39/134 (29%), Gaps = 8/134 (5%)
Query: 337 TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWM 396
+ NRL F V +S G +++F D +
Sbjct: 482 FMYKNRLGFLTQDA----VIMSQVGDYFNFYATSGVTISDADPIDMATSDTKPVKLEAAI 537
Query: 397 HPFGEGVLVGCDTSLWLLSISLS-KGLSIDFRRVSGSG-VYACPPVSVGDCLVFVCGVG- 453
+L G L S S + ++S PV G ++F +G
Sbjct: 538 SSTSGAILFGNQAQFRLSSPDESFGPKTATLDKISNYTYESKADPVQTGVSMIFPTNMGT 597
Query: 454 -RRIKYISGSTEQG 466
+ +S + +G
Sbjct: 598 YSSVYELSTESAKG 611
>gi|325171208|ref|YP_004251180.1| hypothetical protein ViPhICP2p09 [Vibrio phage ICP2]
gi|323512234|gb|ADX87691.1| conserved hypothetical protein [Vibrio phage ICP2]
gi|323512306|gb|ADX87762.1| hypothetical protein TU12-16_00040 [Vibrio phage ICP2_2006_A]
Length = 734
Score = 49.9 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 62/393 (15%), Positives = 117/393 (29%), Gaps = 49/393 (12%)
Query: 110 KTPYTFKDNKSLEYAVFGSTAVFVHKDHPPH---HLLYIQDGDKISFTFDEIKFLPPPWL 166
+T Y+ + FG F P L + E
Sbjct: 79 QTHYSA--IPEILVVQFGDKLHFFDTSVDPLSNGKLFINNQEFLTTEGTTEDIISGASVE 136
Query: 167 GDGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIG 226
G + + ++ +S+ D + IT+ KI R + W ++
Sbjct: 137 GIFVFATQDADP-ISLQIMDIQSDSITARTKIV----VDRKVLFLETRDVWGRSAPSKER 191
Query: 227 AYIVADDKVYRSLTTGRSGDRFGYSKGA--TYVKDNNITWITVLNLSSKTSRESASGAVA 284
++ D +Y + G + + Y +I W L ++ + +A G
Sbjct: 192 PKTLSSDYLYELINQGWDTKKINSTYATIGAYPSGYDIWW---LYKTTAGTDANAIGKFT 248
Query: 285 PYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLL 344
P + KD + + + Q S V+ G PS + R+
Sbjct: 249 PSRM--------KDSTTTGIGQERQNTPAPRGSTVASLQVLAS---GKPSCIQTFAGRVF 297
Query: 345 FSGSKGDE-----------LSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTD------ 387
++G + V+ S + ++ Y DPT + +A+ D
Sbjct: 298 YAGFQATPRKIDDVRPDFRNHVFFSQL-VKSNAEINKCYQFADPTSEVDSALVDTDGGFI 356
Query: 388 --FSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGLSID---FRRVSGSGVYACPPVSV 442
+A I M G+ + + +WLLS + S +++ G + V
Sbjct: 357 KINAARKIVAMEEVSSGLFIIAENGVWLLSGTSDGLFSATGYHVDKITDYGCVSPRSVVA 416
Query: 443 GDCLVFVCGVGRRIKYISGSTEQGFRFNEITQL 475
VF I T +T+L
Sbjct: 417 YGDTVFYWAEEGIIVLSPDQTTGKHSAQNLTEL 449
>gi|29366731|ref|NP_813776.1| tail tubular protein B [Pseudomonas phage gh-1]
gi|29243590|gb|AAO73169.1|AF493143_30 tail tubular protein B [Pseudomonas phage gh-1]
Length = 808
Score = 49.9 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 69/491 (14%), Positives = 137/491 (27%), Gaps = 57/491 (11%)
Query: 26 DLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCR---LDPRSNRVFSFSIPDGGYALL 82
D+ + A N L P + + V + +
Sbjct: 20 DILRFSNQGALQINGWSSETQGLQKRPPTTFTKRLQNKGFLGTKPLVHLINRDAQEQYFV 79
Query: 83 VFGDKKLQIVVVRSST----KWSPALFGKTYKTPYTFKDNKSLEYAVFGSTA-----VFV 133
F L + ++ + ++ +T + V +T
Sbjct: 80 GFSGTGLAVWDLKGNNYTVRGYNGYANCANPRTDLRLITVADYTFVVNRNTVCQMGSTLT 139
Query: 134 HKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSI------SQADT 187
H +P I + + + G + +K + A
Sbjct: 140 HAAYPRLDGRAIINVRGGQYGRTLSITINGDGTGSSPQASIKMPNGSAEKVPAGDPYAGM 199
Query: 188 STARITSDMKIFKPLDKGRSIRLGCHPPEWAKNT-NYSIGAYIVADDKVYRSLTTGRSGD 246
+ +T I L + ++ LG + T I A A+D V + T D
Sbjct: 200 NQVDMTDASWIAAELARQLTVSLGGSGWSFQAGTGWILINA--PANDNVRQIATKDGYAD 257
Query: 247 -----RFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRS 301
+ T + N L + S S Y G + + +
Sbjct: 258 TLLSGFIYQVQTFTKLPANAPP--GYLVEITGESARSGDNYWVQYDASGKVWKETAKPKI 315
Query: 302 IS---VAPQSQTLFQAGVSVVSWFMSAWG-------EQEGYPSHV-------TFHNNRLL 344
I+ A L +A W W + PS V F NRL
Sbjct: 316 IAGFNNATLPHALVRAADGQFDWTPLTWDGRNAGDDDTNPMPSFVGATINDVFFFRNRLG 375
Query: 345 FSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVL 404
F + V +S +++F D + A++ S + + PF E +L
Sbjct: 376 FLSGEN----VVMSRTSKYFNFFPSSVATLSDDDP-IDVAISHNRISILKYAVPFSEQLL 430
Query: 405 VGCDTSLWLLSI-SLSKGLSIDFRRVSGSG-VYACPPVSVGDCLVFVCGVGRRIKYISGS 462
+ D + ++LS ++ +I+ + P +G + F + S
Sbjct: 431 LWSDQAQFVLSSKTILSSKTIELDLTTEFDVSDGARPYGIGRGVYF-----AAPRASFTS 485
Query: 463 TEQGFRFNEIT 473
++ + +++
Sbjct: 486 LKRYYAIQDVS 496
>gi|9634037|ref|NP_052111.1| tail tubular protein B [Yersinia phage phiYeO3-12]
gi|6599028|emb|CAB63632.1| tail tubular protein B [Yersinia phage phiYeO3-12]
Length = 801
Score = 49.5 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 60/165 (36%), Gaps = 21/165 (12%)
Query: 329 QEGYPSH-------VTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKAL 381
YPS + F NRL F + + LS +++F Y +
Sbjct: 344 TNPYPSFTGQTINDIFFFRNRLGFLSGEN----IILSRTSKYFNFFP-ASVSNYSDDDPI 398
Query: 382 TTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISL-SKGLSIDFRRVSGSGVYA-CPP 439
AV+ ST+ + PF E +L+ D + ++L+ S S++ + V P
Sbjct: 399 DVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARP 458
Query: 440 VSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQL--ADHLFNQ 482
VG + F + S + + +++ + A+ +
Sbjct: 459 HGVGRNVYFASP-----RASFTSINRYYAVQDVSSVKNAEDMTAH 498
>gi|291335597|gb|ADD95206.1| tail tubular protein B [uncultured phage MedDCM-OCT-S04-C650]
Length = 845
Score = 49.5 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 67/511 (13%), Positives = 125/511 (24%), Gaps = 74/511 (14%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
M T T +F G + + D V + N P L+ P M+
Sbjct: 1 MPAITQTIPNFLGG------VSRQNDDKKLINQVTECVNGYPDPTYGLLKRPGMEHVNVL 54
Query: 61 RLDPR----------SNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYK 110
+ + F + G + + + T + G Y
Sbjct: 55 KKADGTAFSKTELADAAWFFI-DRDNAGSYIGAIKGTNIYVWTKEDGTFCTVNNTGTAYL 113
Query: 111 TP-----YTFKDNKSLEYAVFGSTAVFVH--KDHPPHHLLYIQDGDKISFTFDEIKFLPP 163
T Y F+ + + + + + ++ ++ D I +
Sbjct: 114 TGTQQSDYHFRSVQDVTVITNKTVTTAMQATPAAAVKSVGTLKLN-SVTDGLDYIVTIQG 172
Query: 164 PWLGDGMISGVKSNAKLSISQADTST---------ARITSDMKIFKPLDKGRSIRLGCHP 214
S + L +D +T A I + G L +
Sbjct: 173 IATSISAQSHTTFDDMLVYDSSDVNTNHHLVDAIKATIEAQHSASNADFDG-VWSLEAYT 231
Query: 215 PEWAKNTNYSIGAYIVADDKVYRSLTT---------------------GRSGDRFGYSKG 253
N A + + T G S + S
Sbjct: 232 NSLVIKRNAGTNAVVTDYTAPTGAATAFTIEAKGGLGNAGIEVFQDSVGSSAELSVESFN 291
Query: 254 ATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQ 313
+VK N + G G D ++ ++
Sbjct: 292 GHHVKVRNTNSADDDYYLEFEAFNGTRGKGFWKEAKGVDVSPGLDAATMPFQLENVGATT 351
Query: 314 AGVSVVSWFMSAWGEQE--------GYPSHVTF-HNNRLLFSGSKGDELSVYLSSFGAFY 364
+ W G+ GY TF +NNR ++L +
Sbjct: 352 FNFKPIPWTARLVGDTNSNPDPSFIGYKITSTFFYNNRFGVLSEDN----IFLGVANDSF 407
Query: 365 DFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTS---LWLLSISLSKG 421
+F + D + V ++ + P +G+L+ ++ S +
Sbjct: 408 NFFVKSALTQVDSDP-IDLNVASVRPVVLNDVLPSPQGLLLFSARQQFQVYSASATTMTP 466
Query: 422 LSIDFRRVSGSG-VYACPPVSVGDCLVFVCG 451
+ R +S PV VG FV
Sbjct: 467 KTTVIRSISNYEMSSDISPVDVGTTAAFVNR 497
>gi|189427235|ref|YP_001949785.1| gp12 [Salmonella phage phiSG-JL2]
gi|189085888|gb|ACD75703.1| gp12 [Salmonella phage phiSG-JL2]
Length = 801
Score = 49.1 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 56/154 (36%), Gaps = 19/154 (12%)
Query: 329 QEGYPSH-------VTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKAL 381
YPS + F NRL F + + LS +++F Y +
Sbjct: 344 TNPYPSFTGQTINDIFFFRNRLGFLSGEN----IILSRTSKYFNFFP-ASVSNYSDDDPI 398
Query: 382 TTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISL-SKGLSIDFRRVSGSGVYA-CPP 439
AV+ ST+ + PF E +L+ D + ++L+ S S++ + V P
Sbjct: 399 DVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARP 458
Query: 440 VSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEIT 473
VG + F + S + + +++
Sbjct: 459 HGVGRNVYFASP-----RASFTSINRYYAVQDVS 487
>gi|17570828|ref|NP_523337.1| tail tubular protein B [Enterobacteria phage T3]
gi|17384312|emb|CAC86300.1| tail tubular protein B [Enterobacteria phage T3]
Length = 801
Score = 49.1 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 21/165 (12%)
Query: 329 QEGYPSH-------VTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKAL 381
YPS + F NRL F + + LS +++F Y +
Sbjct: 344 TNPYPSFTGQTINDIFFFRNRLGFLSGEN----IILSRTSKYFNFFP-ASVSNYSDDDPI 398
Query: 382 TTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSI-SLSKGLSIDFRRVSGSGVYA-CPP 439
AV+ ST+ + PF E +L+ D + ++L+ + S+ + V P
Sbjct: 399 DVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTASDILSSRSVGLNLTTQFDVQDRARP 458
Query: 440 VSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQL--ADHLFNQ 482
VG + F + S + + +++ + A+ +
Sbjct: 459 HGVGRNVYF-----SSPRASFTSINRYYAVQDVSSVKNAEDMTAH 498
>gi|310005866|gb|ADP00251.1| tail tube protein B [Cyanophage Syn26]
Length = 977
Score = 48.3 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 50/390 (12%), Positives = 109/390 (27%), Gaps = 37/390 (9%)
Query: 88 KLQIVVVRSSTKWSPALFGKTYKTPYTFK--DNKSLEYA----VFGSTAVFVHKDHPPHH 141
+I S ++ + T Y + L Y G D
Sbjct: 280 YFRIRTTGQSVPFTTGAGNEQVTT-YQARYTTTFDLLYGGSGWQQGDYFYVWMDDGYYKV 338
Query: 142 LLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQADTSTARITSDMKIFKP 201
++ +I I+ P P+ + I+ + + DT
Sbjct: 339 VIEAISTTQIQANLGLIRPNPTPFDTETTITASGILGDIRQAIIDTGNFTS------ANV 392
Query: 202 LDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNN 261
G + + P N + +S+ + GY + +
Sbjct: 393 QQIGNGLYITR--PSGTFNATAPTSDLLKVMSSEVKSVDDLPDQCKHGYVVKVANSEAD- 449
Query: 262 ITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSW 321
+ R G +++ D ++ + Q VS +W
Sbjct: 450 -EDDYYVKFFGNNDR---DGDGVWEECAKPGRNIEFDKGTMPIQLVRQANGTFLVSQATW 505
Query: 322 FMSAWGE--QEGYPSHV-------TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEY 372
+ G+ PS V F NRL+F + V +S G F++F
Sbjct: 506 ENAEVGDDLTNPNPSFVGKTVNQLVFFRNRLVFLSDEN----VIMSRPGEFFNFW-SKTA 560
Query: 373 GCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLS--KGLSIDFRRVS 430
+ P + + + + ++ G+L+ ++L+ + V+
Sbjct: 561 TTFTPMDVIDLSCSSEYPAIVYDGIQVNAGLLLFTKNQQFMLTTDSDILSPETAKLNAVA 620
Query: 431 GSGVYA-CPPVSVGDCLVFVCGVGRRIKYI 459
P+++G + F+ + ++
Sbjct: 621 SYNFNEKTNPINLGTTVAFIDNANQFTRFF 650
>gi|224164141|ref|XP_002338648.1| predicted protein [Populus trichocarpa]
gi|222873077|gb|EEF10208.1| predicted protein [Populus trichocarpa]
Length = 350
Score = 48.3 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 22/67 (32%), Gaps = 6/67 (8%)
Query: 506 NSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVALSAGEER 565
S LL + + +G W H S A P +++ +V + G
Sbjct: 3 RSDGTLLSLTYVKD-QGVLGWARHTTDGTF--ESVAVIP--EGTEDAVYAVVKRTIGSRT 57
Query: 566 -SFTVRL 571
+ ++
Sbjct: 58 VRYVEKI 64
>gi|77118200|ref|YP_338122.1| tail tube [Enterobacteria phage K1F]
gi|72527944|gb|AAZ72996.1| tail tube [Enterobacteria phage K1F]
gi|83308152|emb|CAJ29385.1| gp12 protein [Enterobacteria phage K1F]
Length = 785
Score = 47.9 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 73/439 (16%), Positives = 122/439 (27%), Gaps = 48/439 (10%)
Query: 47 PLVSMPLMQEYRDCRLDPRSNRVFSFSIPDGG-YALLVFGDKKLQIVVVRSSTKWSPALF 105
L P R +D SN F D +VF +QIV + + ++S +
Sbjct: 41 GLQKRPPTVFKRRLNIDVGSNPKFHLINRDEQEQYYIVFNGSNIQIVDLSGN-QYSVSGS 99
Query: 106 GKTYKTPYTFKDNKSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPW 165
K+ D + V++ I +
Sbjct: 100 VDYVKSSNPRDD---IRVVTVADYTFVVNRKVVVKGGSEKSHSGYNRKARALINLRGGQY 156
Query: 166 ---LGDGMISGVKS-------------NAKLSISQADTSTARITSDMKIFKPLDKGRSIR 209
L G+ GVK K+ + + D G
Sbjct: 157 GRTLKVGINGGVKVSHKLPAGNDAENDPPKVDAQAIGAALRDLLVTAYPTFTFDLGSGFL 216
Query: 210 LGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKG--ATYVKDNNITWITV 267
L P N+ + Y S G + N +
Sbjct: 217 LITAPSGTDINSVETEDGYANQLISPVLDTVQTISKLPLAAPNGYIIKIQGETNSSADEY 276
Query: 268 LNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSW-FMSAW 326
+ ++ V P V G D ++ A Q+ + W A
Sbjct: 277 YVMYDSNTKTWKE-TVEPGVVTGF------DNTTMPHALVRQSDGSFEFKALDWSKRGAG 329
Query: 327 GE-QEGYPSHV-------TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPT 378
+ PS V F+ NRL F + V +S +++ F D
Sbjct: 330 NDDTNPMPSFVDATINDVFFYRNRLGFLSGEN----VIMSRSASYFAFFPKSVATLSDDD 385
Query: 379 KALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSIS---LSKGLSIDFRRVSGSGVY 435
+ AV+ S + + PF E +L+ D ++++ S SK + +D G
Sbjct: 386 P-IDVAVSHPRISILKYAVPFSEQLLLWSDEVQFVMTSSGVLTSKSIQLDVGSEFALGDN 444
Query: 436 ACPPVSVGDCLVFVCGVGR 454
A P +VG + F G
Sbjct: 445 A-RPFAVGRSVFFSAPRGS 462
>gi|315518952|dbj|BAJ51829.1| putative tail tubular protein B [Ralstonia phage RSB2]
Length = 788
Score = 46.4 bits (108), Expect = 0.014, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Query: 336 VTFHNNRL-LFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIH 394
+ F NRL + +G V LS+ G F+ F D + AV+ ST+H
Sbjct: 351 IFFFRNRLGILAGEN-----VILSASGEFFKFWPKSVVTAADTDP-IDVAVSHNRVSTLH 404
Query: 395 WMHPFGEGVLVGCDTSLWLL-SISLSKGLSIDFRRVSGS-GVYACPPVSVGDCLVF 448
F E +L+ D + ++L S + ++ + PV+ G + F
Sbjct: 405 HAVSFAEELLLWSDQTQFILKSDGILSTKTVKVDTATEFESAIDARPVAAGRGVYF 460
>gi|167841461|ref|ZP_02468145.1| tail tubular protein B [Burkholderia thailandensis MSMB43]
Length = 853
Score = 46.0 bits (107), Expect = 0.016, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 59/177 (33%), Gaps = 23/177 (12%)
Query: 286 YYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQE---GYP-------SH 335
+ V G KD I P + V + S G+++ P S
Sbjct: 356 FAVGGITKDGDTFA--IGSGPAQLNAYSTDFQVPKFAGSVCGDKDQTGAIPYFFGKRISL 413
Query: 336 VTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYG--CYDPTKALTTAVTDFSASTI 393
+ +RL+ +V++S G +++F DP +A D +
Sbjct: 414 LAMFQDRLVIVSD----GTVFMSRTGDYFNFFRKTMLSVHDDDPIQAYALGAADDVITR- 468
Query: 394 HWMHPFGEGVLVGCDTSLWLLSISL-SKGLSIDFRRVSG-SGVYACPPVSVGDCLVF 448
+ + + + + + + ++ + +I V+ C PV G+ + +
Sbjct: 469 --CVTYNKNLFLFGLRNQYTIPGNVAASPANITISPVAAERDAILCQPVVHGNIVFY 523
>gi|302339301|ref|YP_003804507.1| hypothetical protein Spirs_2810 [Spirochaeta smaragdinae DSM 11293]
gi|301636486|gb|ADK81913.1| hypothetical protein Spirs_2810 [Spirochaeta smaragdinae DSM 11293]
Length = 570
Score = 45.6 bits (106), Expect = 0.024, Method: Composition-based stats.
Identities = 43/210 (20%), Positives = 76/210 (36%), Gaps = 31/210 (14%)
Query: 321 WFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKA 380
W ++ QE T + R++ +VY+S + DF D
Sbjct: 153 WALAEKTSQE----ISTIYQARMIAVNRTW--GTVYMSVAYIYLDF---------DSDGH 197
Query: 381 LTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSIS----LSKGLSIDFRRVSGSGVYA 436
L + W+ FG V +G D S W+L+ + +++SG G
Sbjct: 198 LELIPDFYGFEHPRWIVAFGGDVYIGTDKSEWMLTSGYPYFTDDLGGLMMQKISGIGADL 257
Query: 437 CPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQLADHLFNQRILQLVYQEEPHSI 496
V G ++ + R ++ I S+ F+ + +L + N I+Q+ E S
Sbjct: 258 --AVVFGSSII-LAKDRRLVR-IVYSSAGEFQSQSMAEL---IDNTDIIQIDV-IEYGSH 309
Query: 497 VWVVLEPKDNSFPRLLGCRFSAEGEGDFAW 526
++V +D L C + G AW
Sbjct: 310 RYLVFIDRDRRLWCLTEC----QNTGVAAW 335
Score = 44.5 bits (103), Expect = 0.051, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 41/141 (29%), Gaps = 20/141 (14%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYR-- 58
M F+ G +SPR + R D + V++ + L G + R
Sbjct: 1 MSRQRILVTDFTRGIVSPR-MVPRIDQTK---AVSELTGFVVLPDGGIRRREGTIYARRG 56
Query: 59 ------DCRLDPRSNRVFSFSIPDGGYALLVFGD--KKLQIVVVRSSTKWSPALFGKTYK 110
DC P L D ++L + + + T S A
Sbjct: 57 LGVLPTDCEAVPAFTTFDKRITGTETLHLAWINDAPRQLNVQNMTNRTIQSVASESLEAG 116
Query: 111 TPYTFK-----DNKSLEYAVF 126
P D +SL YA
Sbjct: 117 KPLLDSGKFNNDLESL-YAQN 136
>gi|326434186|gb|EGD79756.1| hypothetical protein PTSG_10740 [Salpingoeca sp. ATCC 50818]
Length = 1352
Score = 44.5 bits (103), Expect = 0.050, Method: Composition-based stats.
Identities = 45/284 (15%), Positives = 91/284 (32%), Gaps = 40/284 (14%)
Query: 216 EWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITW-------ITVL 268
W+ + + A V+R TG++ + + + +T + +
Sbjct: 111 TWSHDGSRLFSADDEGQLCVWRISKTGKASLTYEHKADTGFTHCVAVTAGSEDTSMVFLG 170
Query: 269 NLSSKTSRESASGAVAP-YYVWGDIKDVSKDGRSISVAPQSQT-------LFQAGVSVVS 320
A+GA P + V I D+ D S S+ +Q + G
Sbjct: 171 TFDKGVMLADATGACTPSFPVTDKIVDLVFDPESASLVVATQDMMVVHHHVAPDGAVKDK 230
Query: 321 WFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKA 380
+ G+ S + F +L + + +++ V+ S G Y S+ E G + P
Sbjct: 231 YEFKMSGKAF---SSLGFAGPGILIAATSENQIRVWCSEEGDSYSLSIAHERGEFTP-SD 286
Query: 381 LTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGLSIDFRRVSGSGVYACPPV 440
+ V A+ I V + W KG + R PP+
Sbjct: 287 IIQTVAYNPANRIIAGTSRNGMVFM------WKF-----KGEAFTDRDSWSF----LPPI 331
Query: 441 SVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQLADHLFNQRI 484
+ LV + + +++ ++ L +H+ +
Sbjct: 332 ELRGSLVGAQWGPDGLLLVRNASDT------VSILREHIMRKHF 369
>gi|304404646|ref|ZP_07386307.1| Kelch repeat-containing protein [Paenibacillus curdlanolyticus YK9]
gi|304346453|gb|EFM12286.1| Kelch repeat-containing protein [Paenibacillus curdlanolyticus YK9]
Length = 697
Score = 43.3 bits (100), Expect = 0.099, Method: Composition-based stats.
Identities = 40/244 (16%), Positives = 72/244 (29%), Gaps = 26/244 (10%)
Query: 242 GRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRS 301
G+ G + + Y + ++W V + R S++G +W D +
Sbjct: 436 GKMWAYAGQYQNSVYSSSDGVSWTCVTREAPWAGRRSSAGVSFMGAIWLFGGDTVNGDAN 495
Query: 302 ISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRL-LFSGSKGDELS---VYL 357
++ W G + G NR+ +F G + V+
Sbjct: 496 DVWVSPDGVNWKCATPNAPW-----GPRNGL--CAVVFQNRMWVFGGRDHQGNTYNDVWA 548
Query: 358 SSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLV--GCDTSLWLLS 415
S GA + L + P A V I V + W
Sbjct: 549 SDNGAH--WELITPQAGWSPRDAAAAVVYQNQIYMIGGSRSGSSLQEVWSTDNGRDWKPL 606
Query: 416 ISLSKGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGS--TEQGFRFNEIT 473
+ + F V +G L + G +++ +S T+ G R+ +T
Sbjct: 607 ANGNVPWLSRFDS---------KAVVLGTNLYLIGGTNSQVRGLSDMWVTQDGSRWEAVT 657
Query: 474 QLAD 477
Q A
Sbjct: 658 QQAP 661
>gi|88705445|ref|ZP_01103156.1| ATP-dependent DNA helicase RecG [Congregibacter litoralis KT71]
gi|88700535|gb|EAQ97643.1| ATP-dependent DNA helicase RecG [Congregibacter litoralis KT71]
Length = 686
Score = 43.3 bits (100), Expect = 0.12, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 49/168 (29%), Gaps = 18/168 (10%)
Query: 40 LIPLRYGPLVSMPLMQEYRDCRLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTK 99
+ G + + + F L GD+ L+
Sbjct: 67 ALVSVSGGGRRRS---LIVKLQDGTGTATLRFFHFSQAQKNALQQGDR-LRCFGTVRRGA 122
Query: 100 WSPALFGKTYK------------TP-YTFKD-NKSLEYAVFGSTAVFVHKDHPPHHLLYI 145
+ Y+ TP Y + ++ A+ V HPP LL +
Sbjct: 123 QQAEMIHPEYRRSIHISDNEESLTPIYPSTEGVSQGQWRKLSDQALSVLAKHPPEELLPV 182
Query: 146 QDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQADTSTARIT 193
++ D + PPP + + A+L ++ + + +++
Sbjct: 183 RENDYGLSSALRFLHRPPPEADQQALRDGRHPAQLRLALEELTAHQLS 230
>gi|253583142|ref|ZP_04860350.1| predicted protein [Fusobacterium varium ATCC 27725]
gi|251835034|gb|EES63587.1| predicted protein [Fusobacterium varium ATCC 27725]
Length = 654
Score = 42.9 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 58/456 (12%), Positives = 129/456 (28%), Gaps = 52/456 (11%)
Query: 1 MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDC 60
+ +T + ++++ GE +L ++ D ++ + N++P G L +
Sbjct: 10 ISSTNFLQNNWQMGEAGNKLAVNK-DSEMYMTTANRIVNMLPTELGGLEVLKEHTPRSIS 68
Query: 61 RLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKS 120
L ++ +I + + + R T F + Y F +N
Sbjct: 69 GLPAGYDKPIIRAINTPFNF-------YICMCMDRIFTMNKSNQFL----SGYVFAEN-- 115
Query: 121 LEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKS--NA 178
+ G + F + F + S N
Sbjct: 116 -GFTRAGKLVLI--------------------DKFVLVTFPNGNRYDLEISSSGNIGLND 154
Query: 179 KLSISQADTSTARITSDMKIFKPLDK--GRSIRLGCHPPEWAKNTNYSIGAYIVADDKVY 236
S S + + + I++ G + ++ + + I I D K+
Sbjct: 155 NFSASITNPLLHKSKVQVDIYQTRKIMIGTTEKIRPYKIRTTDLQEFLISGNIGQDGKLL 214
Query: 237 RSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDI---- 292
+ R Y + + NI+ +T +G Y +
Sbjct: 215 FKYNKEFNITRIYYPYQSDMINMENISGLTENEWFVIIHDVDTTGGGRFYMGNSPVDFTN 274
Query: 293 KDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDE 352
G + A S+++ + + W + G+ V NR++ S
Sbjct: 275 PKTDVTGTYYTTAKVSRSVGNTSLLSYGIMIDLWNNKVGF-HTVAEFQNRMVVSNGT--- 330
Query: 353 LSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLW 412
++ S G + F D + + + +V
Sbjct: 331 -YIFFSKVGDYNYF---LNGELDDDAFFIKLGYVNGEQPIVKNFITGRGLWVVTNKGIFL 386
Query: 413 LLSISLSKGLSIDFRRVSGSGVYACPPVSVGDCLVF 448
+ ++ KG S+D R + V + + L +
Sbjct: 387 ICYNNIVKGSSLDIRMIVADECGN-EAVDINNTLYY 421
>gi|196038454|ref|ZP_03105763.1| hypothetical protein BC059799_3729 [Bacillus cereus NVH0597-99]
gi|228934985|ref|ZP_04097816.1| hypothetical protein bthur0009_34390 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|196030862|gb|EDX69460.1| hypothetical protein BC059799_3729 [Bacillus cereus NVH0597-99]
gi|228824885|gb|EEM70686.1| hypothetical protein bthur0009_34390 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 830
Score = 42.9 bits (99), Expect = 0.15, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 33/95 (34%), Gaps = 20/95 (21%)
Query: 191 RITSDMKIFKPLDKGRSIR-----------------LGCHPPEWAKNTNYSIGAYIVADD 233
+ S F +G + + W Y I +YI A+
Sbjct: 724 SLVSSEPTFGTYSRGELLYNDTPTVGGYIGWVCITAGTANGDFWIAEKEYQINSYINANG 783
Query: 234 KVYRSLTTGRSG-DRFGYSKGATYVKDNNITWITV 267
VY+S+ G SG ++ G + KD NI W V
Sbjct: 784 NVYKSVGRGTSGKTAPSHTNGTS--KDGNIVWEYV 816
>gi|66047262|ref|YP_237103.1| insecticidal toxin protein, putative [Pseudomonas syringae pv.
syringae B728a]
gi|63257969|gb|AAY39065.1| insecticidal toxin protein, putative [Pseudomonas syringae pv.
syringae B728a]
Length = 1617
Score = 42.5 bits (98), Expect = 0.18, Method: Composition-based stats.
Identities = 32/266 (12%), Positives = 75/266 (28%), Gaps = 5/266 (1%)
Query: 167 GDGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIG 226
G + ++++ + DT+ + + + F+ + I +A+ Y IG
Sbjct: 133 KSGYFTQLENDINQNRINVDTAQEAVKAYLASFEEVANLTIINGYIDSDRFAQGKYYFIG 192
Query: 227 AYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPY 286
+ +R++ + G ++G + W + + + P
Sbjct: 193 TSRAENIYYWRTVDMNERAYQEG-TEGPKFDNPTPGAWSDWKRAEIGINANTLERTIRPV 251
Query: 287 YVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFS 346
Y + D ++ + + P V N RL+F+
Sbjct: 252 YFNNRLFVAWVDLVHVTEQVAVTLPEGTVKPAADGSIPITPPADIAPLTVVTPNVRLVFN 311
Query: 347 GSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVG 406
S + S+ + D + KA+ D ++ I + E + +
Sbjct: 312 ISYKKYDDSW-SAPHIYMD--VTTPNVVTRAGKAVNLE-NDLNSIAIFDVSASPESLFIA 367
Query: 407 CDTSLWLLSISLSKGLSIDFRRVSGS 432
L S +
Sbjct: 368 MYAGETLAPGDTDGSTSTYAFLHTAF 393
>gi|330973553|gb|EGH73619.1| insecticidal toxin protein, putative [Pseudomonas syringae pv.
aceris str. M302273PT]
Length = 1189
Score = 42.5 bits (98), Expect = 0.21, Method: Composition-based stats.
Identities = 32/266 (12%), Positives = 75/266 (28%), Gaps = 5/266 (1%)
Query: 167 GDGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIG 226
G + ++++ + DT+ + + + F+ + I +A+ Y IG
Sbjct: 133 KSGYFTQLENDINQNRINVDTAQEAVKAYLASFEEVANLTIINGYIDSDRFAQGKYYFIG 192
Query: 227 AYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPY 286
+ +R++ + G ++G + W + + + P
Sbjct: 193 TSRAENIYYWRTVDMNERAYQEG-TEGPKFDNPTPGAWSDWKRAEIGINANTLERTIRPV 251
Query: 287 YVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFS 346
Y + D ++ + + P V N RL+F+
Sbjct: 252 YFNNRLFVAWVDLVHVTEQVAVTLPEGTVKPAADGSIPITPPADIAPLTVVTPNVRLVFN 311
Query: 347 GSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVG 406
S + S+ + D + KA+ D ++ I + E + +
Sbjct: 312 ISYKKYDDSW-SAPHIYMD--VTTPNVVTRAGKAVNLE-NDLNSIAIFDVSASPESLFIA 367
Query: 407 CDTSLWLLSISLSKGLSIDFRRVSGS 432
L S +
Sbjct: 368 MYAGETLAPGDTDGSTSTYAFLHTAF 393
>gi|302308918|ref|NP_986066.2| AFR519Cp [Ashbya gossypii ATCC 10895]
gi|299790857|gb|AAS53890.2| AFR519Cp [Ashbya gossypii ATCC 10895]
Length = 821
Score = 41.0 bits (94), Expect = 0.59, Method: Composition-based stats.
Identities = 36/306 (11%), Positives = 87/306 (28%), Gaps = 23/306 (7%)
Query: 15 ELSPRLLQSRKDLSLHAQGVAKSR-NLIPLRYGPLVSMPLMQEYRDCRLDPRSNRVFSFS 73
ELS ++ ++ +L A+ + + R + I LR + P + R
Sbjct: 3 ELSEQVERTLGNLEKKAEFLEEQRGHFIALRQRLVEYDP-EKYAAHAGDGGSGVR----- 56
Query: 74 IPDGGYALLVFGDKKL--QIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVFGSTAV 131
LVFG+ L ++ + + + + + LE A
Sbjct: 57 -------GLVFGEVILSTRVYLSLGCEYYVEKQPAEAVA--WVEGRLRLLEDAQDQFRVQ 107
Query: 132 FVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQADTSTAR 191
H L + + + P + + + ++ +
Sbjct: 108 IAHAKSTLRELAALDGAGGADWAAESSGEDGLPLMEIR--EELDEDGNVTSGAVRRAGGP 165
Query: 192 ITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYS 251
++ + + + E + N + G+ A V R+ + D S
Sbjct: 166 EAGAKRVDAAEEGLPLMEIREELDE---DGNVTGGSVRRAGGNVQRAGRAASASDAGHKS 222
Query: 252 KGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTL 311
+ + + + + +G + +Y + ++ S+ V +
Sbjct: 223 QDTGAARPDQAAEERLEQDLAPQQPAEDAGGLDEFYEVLEEMGITAPRESVDVGTPVEAA 282
Query: 312 FQAGVS 317
VS
Sbjct: 283 ESGPVS 288
>gi|310005690|gb|ADP00077.1| tail tube protein B [Cyanophage NATL1A-7]
Length = 1056
Score = 40.6 bits (93), Expect = 0.71, Method: Composition-based stats.
Identities = 38/308 (12%), Positives = 91/308 (29%), Gaps = 34/308 (11%)
Query: 165 WLGDGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYS 224
+ +G+ + + S +T +T+ D+ +
Sbjct: 427 FSAEGIAEDIDQTGTYARSS---NTITVTAASHGLSNGDQIILDITSGGATDGFYTIANV 483
Query: 225 IGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVA 284
D +++ G + T + W V+ ++ + +A
Sbjct: 484 TTNTFTVTDSASGTISAGETCSF-------TPARFGEGVWEEVVQPGKDIEIDNTTMPIA 536
Query: 285 PYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGE--QEGYPSHV------ 336
V ++ G Q+ + S W+ G+ PS +
Sbjct: 537 LTRVLPGSFSINGGGS------QTYSNGAFRFSYPDWYKRDCGDDITNPEPSFIGQTIQK 590
Query: 337 -TFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHW 395
F NR+ +V LS FY+F + + + + ++
Sbjct: 591 MVFFRNRIALL----SAENVILSRVNDFYNFWNKTAMAISNADP-IDLQSSSTYPTKLYD 645
Query: 396 MHPFGEGVLVGCDTSLWLLSISLSKGLSIDFRRVSGSGVYA----CPPVSVGDCLVFVCG 451
G+++ + +LLS L+ + ++S +A P+ +G + F+
Sbjct: 646 AVEQAGGLVIFSASEQFLLSSGAEALLTPETAKISYVSSHAFNPDTSPIELGTTIGFLNS 705
Query: 452 VGRRIKYI 459
+ ++
Sbjct: 706 TAKNTRFF 713
>gi|312621233|ref|YP_004022846.1| glycoside hydrolase family 16 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201700|gb|ADQ45027.1| glycoside hydrolase family 16 [Caldicellulosiruptor kronotskyensis
2002]
Length = 2435
Score = 40.2 bits (92), Expect = 0.93, Method: Composition-based stats.
Identities = 43/282 (15%), Positives = 81/282 (28%), Gaps = 24/282 (8%)
Query: 72 FSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVFGSTAV 131
+ + G + + V V S W+P + + T + + + G+
Sbjct: 1144 YGVSGGRSYSYIIAVSNSKFVRVDPSNAWNPLTASASDAS--TDAELFEIVFKADGNVGF 1201
Query: 132 --------FVHKD---HPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISG-----VK 175
V D P + LL ++ +P + + V
Sbjct: 1202 ASKALNNNLVCADSWSTPDYKLLPRSSYSADPGGWETFTLVPQGDGTIAIKANNGGRFVT 1261
Query: 176 SNAKLSISQADTSTARITSDMKIFKPLDKGR-SIRLGCHPPEWAKNTNYSIGAYIVADDK 234
I +A ++T + I P G+ S+ + + +VA
Sbjct: 1262 VEPTTGILKATSATVGVNEKFIIVTPYAPGQPSVTIDEVLDNSVTFHWSVPSSSVVAGYN 1321
Query: 235 VYRSLTTG--RSGDRFGYSKGATYVKD--NNITWITVLNLSSKTSRESASGAVAPYYVWG 290
VYR+ T+G +Y T + + E+ S V + G
Sbjct: 1322 VYRATTSGGPYIKLNKALLTTTSYTDTSMTANTTYYYIVAAVNARGETKSPEVMVKTLSG 1381
Query: 291 DIKDVSKDGRSISVAPQSQTL-FQAGVSVVSWFMSAWGEQEG 331
I + S S TL + A S+ + + G
Sbjct: 1382 PIPAIPTGLDITSCTQNSITLNWNAAAGAQSYNIYRSTSRFG 1423
>gi|313122738|ref|YP_004044665.1| chitin-binding protein [Halogeometricum borinquense DSM 11551]
gi|312296220|gb|ADQ69309.1| uncharacterized protein contain chitin-binding domain type 3
[Halogeometricum borinquense DSM 11551]
Length = 562
Score = 39.5 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 17/146 (11%), Positives = 42/146 (28%), Gaps = 19/146 (13%)
Query: 193 TSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSK 252
T+ ++ PP+W +T Y+ G +V + ++ + + +
Sbjct: 11 TASALFTTIAGASATVAGAESPPKWDPDTTYTSGDRVVYEGYIWEA-------KWWTH-- 61
Query: 253 GATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLF 312
G K + W + G + I+ ++ +
Sbjct: 62 GTEPQKKSGNPWKQIRE----------DGGGGGTELTAVIETNTETVTVGETVTLDASKS 111
Query: 313 QAGVSVVSWFMSAWGEQEGYPSHVTF 338
++ W + G + V+F
Sbjct: 112 TGDITSYEWTVGDRDPVTGVETTVSF 137
>gi|313674279|ref|YP_004052275.1| glycoside hydrolase family 16 [Marivirga tractuosa DSM 4126]
gi|312940977|gb|ADR20167.1| glycoside hydrolase family 16 [Marivirga tractuosa DSM 4126]
Length = 364
Score = 39.5 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 34/264 (12%), Positives = 78/264 (29%), Gaps = 20/264 (7%)
Query: 140 HHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQADTSTARITSDMKIF 199
+ + DK+ E+ + + + A++ IS + T I + I
Sbjct: 58 YTFSFGDGSDKLRDDDGEVTYSYAESGDYTIEVNAHTTAEVFISSSQEVTITIQQNSDID 117
Query: 200 KPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKD 259
G + W + D G + +G ++ Y ++
Sbjct: 118 DEGYVSPMEYEGYNL-VWQDEFE---ADQLSDDYTF----EIGTGSNGWGNNESQYYREE 169
Query: 260 NNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVV 319
N L + +K + + IK+ +++ + G+
Sbjct: 170 NTRLEEGYLVIQAKKENFQGQEYTSSRIITEGIKEFKYG----RFDIRARMPYGQGIWPA 225
Query: 320 SWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSV-----YLSSFGAFYDFSLDGEYGC 374
W + + Q G+P + + G +G E +V + S+ G + +F
Sbjct: 226 IWMLGSNFRQVGWPHCGEI--DIMEMIGGQGREATVHGTVHWQSNEG-YANFGHSKNLSD 282
Query: 375 YDPTKALTTAVTDFSASTIHWMHP 398
+ ++I W+
Sbjct: 283 GTLADKFHVFSIIWDENSIQWLID 306
>gi|197935887|ref|YP_002213723.1| tail tuber protein B [Ralstonia phage RSB1]
gi|197927050|dbj|BAG70392.1| tail tuber protein B [Ralstonia phage RSB1]
Length = 861
Score = 39.5 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 65/207 (31%), Gaps = 19/207 (9%)
Query: 254 ATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQ 313
TY T + E A+ V P V+ S + Q T
Sbjct: 329 ETYYMRAVKTDTAAAHFGPVQWVEGAAQVVTPGQVFAIASITSTTLTLANSPAQLATAIG 388
Query: 314 AGVSVVSWFM-SAWGEQEGYP-------SHVTFHNNRLLFSGSKGDELSVYLSSFGAFYD 365
+ V + + ++ P SH+ +R++ + + +S G +++
Sbjct: 389 SPVPGYAASVCGDMTDKGAVPYFFGRKVSHMAMFQDRMVIVSN----GVILMSRTGDYFN 444
Query: 366 -FSLDG-EYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSI-SLSKGL 422
F DP +A D S + + + + + + L S
Sbjct: 445 WFRKSKLRVDDDDPVEAFALGSEDDIISQ---SSSYNKDLFLFGERGQYALPGRSAITPK 501
Query: 423 SIDFRRVSG-SGVYACPPVSVGDCLVF 448
+I +V+G P+ VG+ L +
Sbjct: 502 TISITQVAGERDAMLARPIPVGNLLFY 528
>gi|319776426|ref|YP_004138914.1| tail fiber protein [Haemophilus influenzae F3047]
gi|317451017|emb|CBY87248.1| probable tail fiber protein [Haemophilus influenzae F3047]
Length = 747
Score = 39.1 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 28/198 (14%), Positives = 69/198 (34%), Gaps = 19/198 (9%)
Query: 198 IFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYV 257
+FK LD+ + + PEW+ +Y+ G+ + D YR+L ++ + S +V
Sbjct: 50 LFKRLDEKHTYLMQRGLPEWSATQDYTKGSCVQFDGVSYRALKNSKN-NSPNESDSQYWV 108
Query: 258 KDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVS 317
+ W L+ ++ + + D + + +++ + + +
Sbjct: 109 R-----WGFALSEIARATLQQYGIVQLSSATNSDSETKAATSKAVK-TAYDKAVEAKTTA 162
Query: 318 VVSWFMSAWGEQEGYPSHVTFHNNRLLFSGS-KGDELSVYLSSFGAFYDFSLDGEYGCYD 376
++ G S NR++ + + + +Y S G + + G D
Sbjct: 163 DGKVGLNGNESINGEKS----FENRIVAKRNIRISDNPIYASR-GDYLN------IGAND 211
Query: 377 PTKALTTAVTDFSASTIH 394
++ T+
Sbjct: 212 GDCWFEYKSSNREIGTLR 229
>gi|254522602|ref|ZP_05134657.1| Carbohydrate binding domain protein [Stenotrophomonas sp. SKA14]
gi|219720193|gb|EED38718.1| Carbohydrate binding domain protein [Stenotrophomonas sp. SKA14]
Length = 1475
Score = 39.1 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 37/107 (34%), Gaps = 10/107 (9%)
Query: 214 PPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSK 273
EWA T Y G ++ D +YR+L + G W + + +S
Sbjct: 849 ADEWAAGTTYPAGDFVRHDGTLYRAL-----AENVDVEPGTAP-----AVWEAIGDYTSV 898
Query: 274 TSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVS 320
+A+ +++ +V++ ++ P + V S
Sbjct: 899 GDALAAAISMSTKNASDIAAEVTRVDAVVAKLPADGGQAASTGQVSS 945
>gi|325089518|gb|EGC42828.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 1104
Score = 39.1 bits (89), Expect = 2.2, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 22/56 (39%)
Query: 200 KPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGAT 255
P+ + PPEW++NT Y +G + D VY + + + K
Sbjct: 180 GPVTESTETTAAAGPPEWSENTAYKVGDQVSYDGHVYVCIQAHTTVIGWEPPKTPA 235
>gi|240279230|gb|EER42735.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
Length = 1104
Score = 39.1 bits (89), Expect = 2.2, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 22/56 (39%)
Query: 200 KPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGAT 255
P+ + PPEW++NT Y +G + D VY + + + K
Sbjct: 180 GPVTESTETTAAAGPPEWSENTAYKVGDQVSYDGHVYVCIQAHTTVIGWEPPKTPA 235
>gi|225562313|gb|EEH10592.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 1104
Score = 39.1 bits (89), Expect = 2.3, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 22/56 (39%)
Query: 200 KPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGAT 255
P+ + PPEW++NT Y +G + D VY + + + K
Sbjct: 180 GPVTESTETTAAAGPPEWSENTAYKVGDQVSYDGHVYVCIQAHTTVIGWEPPKTPA 235
>gi|332828789|gb|EGK01481.1| hypothetical protein HMPREF9455_02314 [Dysgonomonas gadei ATCC
BAA-286]
Length = 623
Score = 38.7 bits (88), Expect = 2.8, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 59/207 (28%), Gaps = 34/207 (16%)
Query: 228 YIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYY 287
YI A D +R++ + + + Y++ + + + + A
Sbjct: 394 YIGASDNTFRAIDIKTGKLVWEFPEVKGYIETRPLIYKDKIFFGAWDETMYALDKHTGRL 453
Query: 288 VWGDIKD--------------VSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYP 333
+W ++ + D + + T A W MS W +E
Sbjct: 454 LWKWVEGRKGILYSPAAVWPVAAHDRVFFTAPDRVMTAVDANTGETIWRMSDWKVRE--- 510
Query: 334 SHVTFHNN--RL----------LFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYD----P 377
+ + RL +S + ++ ++ G YD +
Sbjct: 511 -TIGLSEDKERLYSKTMQDSVVCYSATSAKPQQIWAANVGYGYDHAPSMPVEKDSVVFGS 569
Query: 378 TKALTTAVTDFSASTIHWMHPFGEGVL 404
TK + + W H G ++
Sbjct: 570 TKNGIIFAIEGKTGKLLWKHKVGNSII 596
>gi|329123905|ref|ZP_08252457.1| phage tail fiber protein [Haemophilus aegyptius ATCC 11116]
gi|327468100|gb|EGF13587.1| phage tail fiber protein [Haemophilus aegyptius ATCC 11116]
Length = 240
Score = 38.7 bits (88), Expect = 3.1, Method: Composition-based stats.
Identities = 28/198 (14%), Positives = 69/198 (34%), Gaps = 19/198 (9%)
Query: 198 IFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYV 257
+FK LD+ + + PEW+ +Y+ G+ + D YR+L ++ + S +V
Sbjct: 50 LFKRLDEKHTYLMQRGLPEWSATQDYTKGSCVQFDGVSYRALKNSKN-NSPNESDSQYWV 108
Query: 258 KDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVS 317
+ W L+ ++ + + D + + +++ + + +
Sbjct: 109 R-----WGFALSEIARATLQQYGIVQLSSATNSDSETKAATSKAVK-TAYDKAVEAKTTA 162
Query: 318 VVSWFMSAWGEQEGYPSHVTFHNNRLLFSGS-KGDELSVYLSSFGAFYDFSLDGEYGCYD 376
++ G S NR++ + + + +Y S G + + G D
Sbjct: 163 DGKVGLNGNESINGEKS----FENRIVAKRNIRISDNPIYASR-GDYLN------IGAND 211
Query: 377 PTKALTTAVTDFSASTIH 394
++ T+
Sbjct: 212 GDCWFEYKSSNREIGTLR 229
>gi|12056574|gb|AAG47946.1|AF222787_1 cycloinulo-oligosaccharide fructanotransferase [Paenibacillus
macerans]
Length = 1333
Score = 38.3 bits (87), Expect = 3.3, Method: Composition-based stats.
Identities = 42/256 (16%), Positives = 78/256 (30%), Gaps = 27/256 (10%)
Query: 86 DKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVFGSTAVFVHKDHPPHHLLYI 145
D K+++ + TP T + + K++ P L +
Sbjct: 552 DGKIKLYLNGEEVASQATPVNVPI-TPSTES--------------LIIGKNNKPVELAGV 596
Query: 146 QDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQA-DTSTARITSDMKIFKPLDK 204
+ S DE+K +++G +S L A I D +F D+
Sbjct: 597 FSFNMFSGLLDEVKLHNKALTNQEILAGYESVKALHGGSIPKIPNADIDEDPSVFD-GDQ 655
Query: 205 GRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITW 264
R P W + I + K + G + +V D+ + W
Sbjct: 656 HRPQYHAMPPQNWMNEAHAPI----YYNGKYHLFYQHNPQGPFWHQIHWGHWVSDDMVNW 711
Query: 265 ITV---LNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSW 321
V L + T + + + Y + + S++P +T +
Sbjct: 712 ENVRPALAPEAGTLDPDGTWSGSAAYDRNGNPVLFYTAGNDSLSPNQRTGLATPADLSDP 771
Query: 322 FMSAWGEQEGYPSHVT 337
++ W E YP VT
Sbjct: 772 YLEKW---EKYPKPVT 784
>gi|254521915|ref|ZP_05133970.1| Carbohydrate binding domain protein [Stenotrophomonas sp. SKA14]
gi|219719506|gb|EED38031.1| Carbohydrate binding domain protein [Stenotrophomonas sp. SKA14]
Length = 1553
Score = 38.3 bits (87), Expect = 3.3, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 36/107 (33%), Gaps = 10/107 (9%)
Query: 214 PPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSK 273
EW T Y G ++ D +YR+L + G W + + +S
Sbjct: 950 ADEWVAGTTYPAGDFVRHDGTLYRAL-----AENVDVEPGTDP-----AVWEAIGDYTSV 999
Query: 274 TSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVS 320
+A+ +++ +V++ ++ P + V S
Sbjct: 1000 GDALAAAISMSTKNASDIAAEVTRVDAVVAKLPADGGQAASTGQVAS 1046
>gi|309271529|ref|XP_003085345.1| PREDICTED: hypothetical protein LOC100503043 [Mus musculus]
Length = 2318
Score = 38.3 bits (87), Expect = 3.5, Method: Composition-based stats.
Identities = 46/335 (13%), Positives = 88/335 (26%), Gaps = 44/335 (13%)
Query: 107 KTYKTPYTFKDNKSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWL 166
+ P+ + + ++ D ++T E + W
Sbjct: 1064 QAIAGPWAVSQVTDGSW-----------PAVQASGVSWVVDQATGTWTVAENQTGAVSWA 1112
Query: 167 GDGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWA-----KNT 221
G G I + + + T+ T K R W +
Sbjct: 1113 GAGNIVSIGY---WTGAVDQTNAVSWTGTTDQVGVEVKPRFEDQASEKGSWVVAGVQTSG 1169
Query: 222 NYSIGAYIVADDKVY-RSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESAS 280
+G+ + + + ++ + R G A +S ++ +S+S
Sbjct: 1170 ETRLGSEDQSSGRSWTETVDQANAASRLGTVDQAGGTSWAGTGDQVGGVSTSGSADQSSS 1229
Query: 281 GAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHN 340
G+ W ++++ + QS + G + +W G PS +
Sbjct: 1230 GS------WAGTRNLAGERSWTGTGDQSDGAAKPGFENQTSDEGSWAGTIGQPSGGSKSV 1283
Query: 341 NRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFG 400
+ +G + + LS G F LD G P A
Sbjct: 1284 SEAQSAGRSWADSADQLS--GGFLVGPLDQANGESQPVSGELAASGVDQ----------- 1330
Query: 401 EGVLVGCDTSLWLLSISLSKGLSIDFRRVSGSGVY 435
W S S G S R +G
Sbjct: 1331 -----TSGGGCWTGSGDQSGGESRLGPRDQSNGES 1360
>gi|159037262|ref|YP_001536515.1| chitin-binding domain-containing protein [Salinispora arenicola
CNS-205]
gi|157916097|gb|ABV97524.1| chitin-binding domain 3 protein [Salinispora arenicola CNS-205]
Length = 338
Score = 38.3 bits (87), Expect = 3.9, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 41/164 (25%), Gaps = 8/164 (4%)
Query: 161 LPPPWLGDGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKN 220
P P + A + + + T TA TS + P W
Sbjct: 181 SPTPTASPTSTASPTPTASPTSTASPTPTASPTSTASPTPTGTPSPTSTGTPAPESWQVG 240
Query: 221 TNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESAS 280
T Y IG + D YR+ + + + W V +
Sbjct: 241 TTYQIGDEVTYDGVSYRARQAHTATPGWEPPRVPA-------LWTAVTPPPATGDPAPGD 293
Query: 281 G-AVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFM 323
G AV Y GD A + ++ W
Sbjct: 294 GWAVGIAYQIGDEVTYDGVSYLARQAHTATPGWEPPHVPSLWIR 337
>gi|256376322|ref|YP_003099982.1| glycoside hydrolase family 6 [Actinosynnema mirum DSM 43827]
gi|255920625|gb|ACU36136.1| glycoside hydrolase family 6 [Actinosynnema mirum DSM 43827]
Length = 605
Score = 37.9 bits (86), Expect = 4.8, Method: Composition-based stats.
Identities = 42/327 (12%), Positives = 72/327 (22%), Gaps = 23/327 (7%)
Query: 141 HLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQADTSTARITSDMKIFK 200
G + F + N +
Sbjct: 243 KQARTAPGGNLVFQVVIYNLPGRDCAALASNGELGPNDLPRYKTEYIDKIAGILARPAYA 302
Query: 201 PLDKGRSIRLGCHPPEWAK----NTNYSIGAYIVADDKV-----YRSLTTGRSGDRFGYS 251
L I + P T + A+ Y G G+ + Y
Sbjct: 303 SLRIVAVIEIDSLPNLVTNVSPRPTQTPNCDTMKANQNYQNGVAYAVSKLGDIGNVYNYL 362
Query: 252 KGAT--YVKDNNITWITVLNLSSKTSRESASG--AVAPYYVWGDIKDVSKDGRSISVAPQ 307
++ + +S S G V G I + +
Sbjct: 363 DSGHHGWIGWGDPIPEYDNFHASAKMMASILGREGATKADVHGFITNTANYSALEEPFWT 422
Query: 308 SQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSG-SKGDELSVYLSSFGAFYDF 366
+ W + G T L+ +G G + + S G
Sbjct: 423 VDDVVGGQAVKEKSKWVDWNDFNGELGFATAFRQELVANGFDAGVGMLIDTSRNGWGGSG 482
Query: 367 SLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGV--------LVGCDTSLWLLSISL 418
+ DP+ + + D +W + G G+ D +W+
Sbjct: 483 RPTAKSSSTDPSVYVDQSRIDKRIQKGNWCNQSGAGLGERPKAAPKPNIDAYVWIKPPGE 542
Query: 419 SKGLSIDFRRVSGSGVYA-CPPVSVGD 444
S G S G G C P G+
Sbjct: 543 SDGSSTQIPNNEGKGFDRMCDPTYGGN 569
>gi|281211601|gb|EFA85763.1| hypothetical protein PPL_00993 [Polysphondylium pallidum PN500]
Length = 310
Score = 36.8 bits (83), Expect = 9.6, Method: Composition-based stats.
Identities = 32/232 (13%), Positives = 53/232 (22%), Gaps = 39/232 (16%)
Query: 109 YKTP--YTFKDNKSLEYAVFGSTAVFVHKDHP-PHHLLYIQDGDKISFTFDE-------- 157
TP Y D+ + Y G T +H + H L Y + D I++T D
Sbjct: 9 ITTPSYYGITDSPA--YIQLGGTVYCIHHGYENNHELWYTKSNDLITWTADAQFVDVQTT 66
Query: 158 ------------IKFLPPPWLGDGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKG 205
F G ++ VK
Sbjct: 67 FSPAAIVFNSIIYGFHNGSPNSSGDLNYVKVTGNSVTQDNPIHGLPEWKSSNSPSATVFN 126
Query: 206 RSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWI 265
+ L H P + K+ + + + Y + + +
Sbjct: 127 NLMYLAYHGPN--------------NNGKLLLASSPDGVASNWSYKEVPGITITGSPSMA 172
Query: 266 TVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVS 317
T R +A G D + +V A S
Sbjct: 173 TFNGKIYIVFRNTALGNGVYVTSTSDTNTWTTPTLIPNVQVSGDPKLTATAS 224
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.308 0.118 0.326
Lambda K H
0.267 0.0367 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,905,769,435
Number of Sequences: 14124377
Number of extensions: 387266902
Number of successful extensions: 853322
Number of sequences better than 10.0: 245
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 208
Number of HSP's that attempted gapping in prelim test: 852110
Number of HSP's gapped (non-prelim): 503
length of query: 578
length of database: 4,842,793,630
effective HSP length: 145
effective length of query: 433
effective length of database: 2,794,758,965
effective search space: 1210130631845
effective search space used: 1210130631845
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 84 (37.1 bits)