HHsearch alignment for GI: 254781209 and conserved domain: PHA00428
>PHA00428 tail tubular protein A.
Probab=99.98 E-value=3.8e-31 Score=202.19 Aligned_cols=162 Identities=19% Similarity=0.275 Sum_probs=140.1
Q ss_pred CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE-EECCCCCCCCCCCEEEECCCCCEE
Q ss_conf 9889999999997182112433688978999999967999988640477511110-000345677676504654855000
Q gi|254781209|r 1 MTELEICNWALLKLGQRPLENWNERSLKADYCRLLLPPIHKGLLRSFSWSFATQS-MDLLPLYFTYNGELKYYIPLKCLK 79 (175)
Q Consensus 1 ~T~l~i~N~aL~~iG~~~I~sl~e~t~~A~~~~~~y~~~r~~~L~~~~W~Fa~~r-~~L~~~~~~~~~~~~y~lP~D~lr 79 (175)
T Consensus 9 ~teL~AVN~iL~~IGeaPV~sLd~~npd~~~A~~~L~ev~r~V-QseGW~FNTE~~~~ltpd~~~----~~I~vP~n~L~ 83 (193)
T PHA00428 9 LTELDAVNDILASIGEPPVTTLDDTNPDVANARRILNDINRQV-QSEGWTFNIEEGATLTPDPFT----GRINLPSDYLS 83 (193)
T ss_pred CCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-HHCCCEECCCCCEEEEECCCC----CEEECCCCEEE
T ss_conf 3348999999997187876435678967999999999998999-860524222325574126999----95935654899
Q ss_pred EEECCCCC--CCCCCEEEEC----CCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 23204566--3123125430----47877089999971786675599999999999999957752968999999999999
Q gi|254781209|r 80 VLNTSEET--QLRGRCIVAR----GDTPRPLSLKYIGEVPLSDCDPLYQEAFALKLAGELCPPLIMDDQMRSYLKGESER 153 (175)
Q Consensus 80 v~~v~~~~--~~~~~~~~~~----~~~~~~~~~~yv~~~~~~~~p~~f~~~i~~~lA~~~A~~itg~~~l~~~l~q~~~~ 153 (175)
T Consensus 84 vd~~~~~~d~v~Rg~~LYDr~n~T~~f~~~i~~dvv~~l~fedlPe~~q~yIt~rAAr~f~~r~vG~~~l~q~l~~dE~~ 163 (193)
T PHA00428 84 FYPDSGDTQYVNRGGYVYDRSTGTDRFGSPVTVRLVLLREFDEMPECFRRYIVTKAARQFNTRFFGAPETAQVLAEEEQE 163 (193)
T ss_pred EECCCCCCEEEEECCEEEECCCCCEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 97689952479766899985889667289727879998134548899999999999999999853869999999999999
Q ss_pred HHHHHHHHHCCCCC
Q ss_conf 99999983221787
Q gi|254781209|r 154 VLAVAMDMDGVEIP 167 (175)
Q Consensus 154 ~l~~A~~~Da~q~~ 167 (175)
T Consensus 164 Ara~l~e~e~~q~d 177 (193)
T PHA00428 164 ARAEVSEYETDQGD 177 (193)
T ss_pred HHHHHHHHHHHCCC
T ss_conf 99999999984578