HHsearch alignment for GI: 254781210 and conserved domain: PHA01511
>PHA01511 coat protein.
Probab=96.76 E-value=0.021 Score=32.50 Aligned_cols=120 Identities=13% Similarity=0.068 Sum_probs=78.4
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 410068--999999999987768899999862014556666654456666402302357764222899999999860238
Q gi|254781210|r 96 SGINPL--LPYASLATAAMHRKQDEAILKGMLGVNKKGKIGAETEFFSKENILSAVEGDDFFKTFIGQLITAKSIFRKRY 173 (343)
Q Consensus 96 ~~~d~r--s~y~~~~g~ALar~~D~~I~~a~~g~a~~~~~g~~~~~~~~~~~~~~~~~~~~~~lt~akl~~a~~~ld~~~ 173 (343)
T Consensus 93 eLRd~~~~~~~gqAA~qkLAs~V~sal~~~aal~gs~v~~------------~~~~~g-t~~ad~wd~vAd~d~~m~~~~ 159 (430)
T PHA01511 93 DLRDETAYRHRIQSAARKLANNVELKVANMAAEMGSLVIT------------SPDAIG-TNTADAWNFVADAEELMFSRE 159 (430)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE------------ECCCCC-CCCCCHHHHHHHHHHHHHHCC
T ss_conf 4218687777889999888765658999999865205785------------023357-887430456777777776414
Q ss_pred CCCCCCEEEEECCHHHHHHHHCCCCEEEHHCCCC---CCCCCCCEE-EEEEE-EEEEECCCCC
Q ss_conf 8975460799769999987506710100000134---311367012-27435-8997077787
Q gi|254781210|r 174 IDVDSEQVYVLIPSDVWASLFALERATSKDYINT---AALQAGKIE-AFAGV-WFINMEKVPG 231 (343)
Q Consensus 174 Vp~~g~~~~~v~~p~~~~~Ll~~t~~~s~Df~~~---~al~~G~I~-~~~G~-~~i~s~~lp~ 231 (343)
T Consensus 160 l~~~~gr~~F-~np~dy~~~a~--nL~gR~~~~~~~~~AYe~a~I~~~VAgFd~~~~s~k~p~ 219 (430)
T PHA01511 160 LNRDMGTSYF-FNPQDYKKAGY--DLTKRDIFGRIPEEAYRDGTIQRQVAGFDDVLRSPKLPV 219 (430)
T ss_pred CCCCCCCEEE-ECHHHHHHHHH--HCCCCHHCCCCCHHHHHHCCCCCCCCCHHHHHCCCCCEE
T ss_conf 7888660234-17577778765--404740105777888752332100035788750776403