HHsearch alignment for GI: 254781210 and conserved domain: PHA01511

>PHA01511 coat protein.
Probab=96.76  E-value=0.021  Score=32.50  Aligned_cols=120  Identities=13%  Similarity=0.068  Sum_probs=78.4

Q ss_pred             HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             410068--999999999987768899999862014556666654456666402302357764222899999999860238
Q gi|254781210|r   96 SGINPL--LPYASLATAAMHRKQDEAILKGMLGVNKKGKIGAETEFFSKENILSAVEGDDFFKTFIGQLITAKSIFRKRY  173 (343)
Q Consensus        96 ~~~d~r--s~y~~~~g~ALar~~D~~I~~a~~g~a~~~~~g~~~~~~~~~~~~~~~~~~~~~~lt~akl~~a~~~ld~~~  173 (343)
T Consensus        93 eLRd~~~~~~~gqAA~qkLAs~V~sal~~~aal~gs~v~~------------~~~~~g-t~~ad~wd~vAd~d~~m~~~~  159 (430)
T PHA01511         93 DLRDETAYRHRIQSAARKLANNVELKVANMAAEMGSLVIT------------SPDAIG-TNTADAWNFVADAEELMFSRE  159 (430)
T ss_pred             HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE------------ECCCCC-CCCCCHHHHHHHHHHHHHHCC
T ss_conf             4218687777889999888765658999999865205785------------023357-887430456777777776414


Q ss_pred             CCCCCCEEEEECCHHHHHHHHCCCCEEEHHCCCC---CCCCCCCEE-EEEEE-EEEEECCCCC
Q ss_conf             8975460799769999987506710100000134---311367012-27435-8997077787
Q gi|254781210|r  174 IDVDSEQVYVLIPSDVWASLFALERATSKDYINT---AALQAGKIE-AFAGV-WFINMEKVPG  231 (343)
Q Consensus       174 Vp~~g~~~~~v~~p~~~~~Ll~~t~~~s~Df~~~---~al~~G~I~-~~~G~-~~i~s~~lp~  231 (343)
T Consensus       160 l~~~~gr~~F-~np~dy~~~a~--nL~gR~~~~~~~~~AYe~a~I~~~VAgFd~~~~s~k~p~  219 (430)
T PHA01511        160 LNRDMGTSYF-FNPQDYKKAGY--DLTKRDIFGRIPEEAYRDGTIQRQVAGFDDVLRSPKLPV  219 (430)
T ss_pred             CCCCCCCEEE-ECHHHHHHHHH--HCCCCHHCCCCCHHHHHHCCCCCCCCCHHHHHCCCCCEE
T ss_conf             7888660234-17577778765--404740105777888752332100035788750776403