BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781212|ref|YP_003065625.1| hypothetical protein CLIBASIA_05595 [Candidatus Liberibacter asiaticus str. psy62] (109 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254781212|ref|YP_003065625.1| hypothetical protein CLIBASIA_05595 [Candidatus Liberibacter asiaticus str. psy62] gi|254040889|gb|ACT57685.1| hypothetical protein CLIBASIA_05595 [Candidatus Liberibacter asiaticus str. psy62] gi|317120677|gb|ADV02500.1| hypothetical protein SC1_gp100 [Liberibacter phage SC1] gi|317120821|gb|ADV02642.1| hypothetical protein SC1_gp100 [Candidatus Liberibacter asiaticus] Length = 109 Score = 225 bits (573), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 109/109 (100%), Positives = 109/109 (100%) Query: 1 MVNFRKLADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPEGRFVLTDLMVE 60 MVNFRKLADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPEGRFVLTDLMVE Sbjct: 1 MVNFRKLADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPEGRFVLTDLMVE 60 Query: 61 GGLLSSVSNDSAHQLALLEGKRSLAVHIASNCGLSFERIVQMYSDNPRY 109 GGLLSSVSNDSAHQLALLEGKRSLAVHIASNCGLSFERIVQMYSDNPRY Sbjct: 61 GGLLSSVSNDSAHQLALLEGKRSLAVHIASNCGLSFERIVQMYSDNPRY 109 >gi|315122899|ref|YP_004063388.1| hypothetical protein CKC_05775 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496301|gb|ADR52900.1| hypothetical protein CKC_05775 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 108 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 62/104 (59%), Positives = 80/104 (76%) Query: 1 MVNFRKLADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPEGRFVLTDLMVE 60 M++F+ +A+ IK+ L RGYTVD LA +LEEDE+R+R YK V++T G+ VL DLMVE Sbjct: 1 MIDFKAIAEKIKNTALGRGYTVDPVVLAERLEEDEKRLRLYKSVFATEAGKEVLIDLMVE 60 Query: 61 GGLLSSVSNDSAHQLALLEGKRSLAVHIASNCGLSFERIVQMYS 104 GGLLSS D A +LA EGKR++AV IAS+ GL+FE+IVQMYS Sbjct: 61 GGLLSSPEIDDALKLAHCEGKRAMAVRIASSLGLNFEQIVQMYS 104 >gi|315121937|ref|YP_004062426.1| hypothetical protein CKC_00935 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495339|gb|ADR51938.1| hypothetical protein CKC_00935 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 104 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/98 (60%), Positives = 74/98 (75%) Query: 7 LADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPEGRFVLTDLMVEGGLLSS 66 +A+ IK+ L RGYTVD LA +LEEDE+R+R YK V++T G+ VL DLMVEGGLLS Sbjct: 3 IAEKIKNTALGRGYTVDPVVLAERLEEDEKRLRLYKSVFATEAGKEVLIDLMVEGGLLSY 62 Query: 67 VSNDSAHQLALLEGKRSLAVHIASNCGLSFERIVQMYS 104 D A +LA EGKR++AV IAS+ GL+FE+IVQMYS Sbjct: 63 PEIDDALKLAHCEGKRAMAVRIASSLGLNFEQIVQMYS 100 >gi|317120720|gb|ADV02542.1| hypothetical protein SC2_gp100 [Liberibacter phage SC2] gi|317120781|gb|ADV02602.1| hypothetical protein SC2_gp100 [Candidatus Liberibacter asiaticus] Length = 90 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/69 (40%), Positives = 45/69 (65%) Query: 37 RIRHYKHVYSTPEGRFVLTDLMVEGGLLSSVSNDSAHQLALLEGKRSLAVHIASNCGLSF 96 ++R YK V++T EGR+VL D+M EGGLL++ ++ LA EGKR++A++I L Sbjct: 16 QVRRYKSVFATFEGRWVLLDIMREGGLLATELSNDPIALARREGKRTIALYITDLIALEA 75 Query: 97 ERIVQMYSD 105 E ++ Y + Sbjct: 76 EELISAYRE 84 >gi|167041084|gb|ABZ05845.1| hypothetical protein ALOHA_HF400048F7ctg1g12 [uncultured marine microorganism HF4000_48F7] Length = 97 Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 8/84 (9%) Query: 32 EEDERRIRHYKHVYSTPEGRFVLTDLMVEGGLLSS--VSNDSAHQLALLEGKRSLAVHIA 89 E++++R+ Y+ ++ P+G+ VL+DL G+ V D + A +G+RS+ + + Sbjct: 5 EKEKKRLADYRTIFEGPQGQRVLSDLCHRHGIFDPCHVPGD-PYSTAYNDGRRSVIIDLL 63 Query: 90 SNCGLSFER----IVQMYSD-NPR 108 G ER ++Q Y D +PR Sbjct: 64 RYLGTDLERLDNLLIQPYGDYDPR 87 >gi|257899794|ref|ZP_05679447.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus faecium Com15] gi|257837706|gb|EEV62780.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus faecium Com15] Length = 443 Score = 37.0 bits (84), Expect = 0.84, Method: Compositional matrix adjust. Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 23/106 (21%) Query: 6 KLADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPEGRFVLTDLMVEG---- 61 ++AD I ++ +T+D+D +LE P+ +FV+T MV G Sbjct: 314 QIADTISDQISGNIHTIDTDREGNRLE--------------NPKFKFVVTPQMVNGVGTI 359 Query: 62 --GLLSSVSNDSAHQLALLEGKRSLAVHIASNCGLSFERIVQMYSD 105 G+LS + +D A + ++ KR++ + L + R++Q+ S+ Sbjct: 360 SFGVLSEIISDVAQKTMVMNQKRNILIE---QVNLHYLRLIQLESE 402 >gi|293571151|ref|ZP_06682189.1| CBS domain protein [Enterococcus faecium E980] gi|291608764|gb|EFF38048.1| CBS domain protein [Enterococcus faecium E980] Length = 443 Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust. Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 23/106 (21%) Query: 6 KLADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPEGRFVLTDLMVEG---- 61 ++AD I ++ +T+D+D +LE P+ +FV+T MV G Sbjct: 314 QIADTISDQISGNIHTIDTDREGNRLE--------------NPKFKFVVTPQMVNGVGTI 359 Query: 62 --GLLSSVSNDSAHQLALLEGKRSLAVHIASNCGLSFERIVQMYSD 105 G+LS + +D A + ++ KR++ + L + R++Q+ S+ Sbjct: 360 SFGVLSEIISDVAQKTMVMNQKRNILIE---QVNLHYLRLIQLESE 402 >gi|227552401|ref|ZP_03982450.1| CBS domain transcriptional regulator [Enterococcus faecium TX1330] gi|257888358|ref|ZP_05668011.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus faecium 1,141,733] gi|257896752|ref|ZP_05676405.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus faecium Com12] gi|293378067|ref|ZP_06624243.1| DRTGG domain protein [Enterococcus faecium PC4.1] gi|227178455|gb|EEI59427.1| CBS domain transcriptional regulator [Enterococcus faecium TX1330] gi|257824412|gb|EEV51344.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus faecium 1,141,733] gi|257833317|gb|EEV59738.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus faecium Com12] gi|292643322|gb|EFF61456.1| DRTGG domain protein [Enterococcus faecium PC4.1] Length = 443 Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust. Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 23/106 (21%) Query: 6 KLADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPEGRFVLTDLMVEG---- 61 ++AD I ++ +T+D+D +LE P+ +FV+T MV G Sbjct: 314 QIADTISDQISGNIHTIDTDREGNRLE--------------NPKFKFVVTPQMVNGVGTI 359 Query: 62 --GLLSSVSNDSAHQLALLEGKRSLAVHIASNCGLSFERIVQMYSD 105 G+LS + +D A + ++ KR++ + L + R++Q+ S+ Sbjct: 360 SFGVLSEIISDVAQKTMVMNQKRNILIE---QVNLHYLRLIQLESE 402 >gi|84500627|ref|ZP_00998876.1| hypothetical protein OB2597_11731 [Oceanicola batsensis HTCC2597] gi|84391580|gb|EAQ03912.1| hypothetical protein OB2597_11731 [Oceanicola batsensis HTCC2597] Length = 443 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 5/43 (11%) Query: 29 RQLEEDERRIRHYKHVYSTPEGRFVLTDLMVEGGLLSSVSNDS 71 RQ+ +ERR+ HY H+ TP+ R V GGL+SS +N+S Sbjct: 288 RQMAYEERRLLHYFHL--TPDNRMVFGQ---RGGLISSAANES 325 >gi|317152044|ref|YP_004120092.1| hypothetical protein Daes_0321 [Desulfovibrio aespoeensis Aspo-2] gi|316942295|gb|ADU61346.1| hypothetical protein Daes_0321 [Desulfovibrio aespoeensis Aspo-2] Length = 76 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 29/50 (58%) Query: 39 RHYKHVYSTPEGRFVLTDLMVEGGLLSSVSNDSAHQLALLEGKRSLAVHI 88 R Y+ ++ + +G+ V+ DL G L S + + AL EG+RSL +H+ Sbjct: 10 RAYRRLFESTDGQTVMEDLEQRGSFLRSTFSTDPGRTALNEGRRSLVLHV 59 >gi|291515047|emb|CBK64257.1| Fic/DOC family [Alistipes shahii WAL 8301] Length = 327 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 27/46 (58%) Query: 4 FRKLADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPE 49 FR A+ I + L +GY V++ A A QLEE ++ +R HV + E Sbjct: 105 FRIWANKILKEYLIKGYAVNTQAKAEQLEELKKTVRLLSHVLAAKE 150 >gi|291334463|gb|ADD94117.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1161] gi|291334660|gb|ADD94307.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C695] gi|291334714|gb|ADD94360.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C890] gi|291336440|gb|ADD95995.1| hypothetical protein [uncultured organism MedDCM-OCT-S04-C1073] Length = 78 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 42/65 (64%), Gaps = 4/65 (6%) Query: 29 RQLEEDERRIR-HYKHVYSTPEGRFVLTDLMVEGGLLSS--VSNDSAHQLALLEGKRSLA 85 +QLE +++R +Y+++++T EG+ VL+DL S+ V DS H+ A +EG+RS+ Sbjct: 5 KQLESLVKKLRENYQYIFNTDEGKEVLSDLEKRCHYHSTTNVKGDS-HESAYMEGQRSVL 63 Query: 86 VHIAS 90 + I S Sbjct: 64 LFIKS 68 >gi|301046407|ref|ZP_07193567.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|300301633|gb|EFJ58018.1| conserved hypothetical protein [Escherichia coli MS 185-1] Length = 98 Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust. Identities = 20/76 (26%), Positives = 43/76 (56%), Gaps = 4/76 (5%) Query: 35 ERRIRHYKHVYSTPEGRFVLTDLMVEGGLLSSVSNDSAHQLALLEGKRSLAVH----IAS 90 +R I + V S+ +GR V+ ++ +G + S++S A +A EG+R+LA+ + + Sbjct: 22 QREIDDIRFVMSSEQGRRVVWSVLEKGRVFSAISPMDAMAMAFNEGQRNLALELFQRVMA 81 Query: 91 NCGLSFERIVQMYSDN 106 +C + ++V+ S+ Sbjct: 82 HCPEQYLKMVKEASEQ 97 >gi|69245236|ref|ZP_00603314.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus faecium DO] gi|257880121|ref|ZP_05659774.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus faecium 1,230,933] gi|257882353|ref|ZP_05662006.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus faecium 1,231,502] gi|257885550|ref|ZP_05665203.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus faecium 1,231,501] gi|257891212|ref|ZP_05670865.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus faecium 1,231,410] gi|257894024|ref|ZP_05673677.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus faecium 1,231,408] gi|258614545|ref|ZP_05712315.1| CBS domain-containing protein [Enterococcus faecium DO] gi|260560270|ref|ZP_05832446.1| thioesterase superfamily protein [Enterococcus faecium C68] gi|261208206|ref|ZP_05922879.1| thioesterase superfamily protein [Enterococcus faecium TC 6] gi|289566578|ref|ZP_06446999.1| CBS domain-containing protein [Enterococcus faecium D344SRF] gi|293552927|ref|ZP_06673582.1| CBS domain protein [Enterococcus faecium E1039] gi|293560636|ref|ZP_06677123.1| CBS domain protein [Enterococcus faecium E1162] gi|293570170|ref|ZP_06681248.1| CBS domain protein [Enterococcus faecium E1071] gi|294615820|ref|ZP_06695663.1| CBS domain protein [Enterococcus faecium E1636] gi|294617809|ref|ZP_06697421.1| CBS domain protein [Enterococcus faecium E1679] gi|294623457|ref|ZP_06702309.1| CBS domain protein [Enterococcus faecium U0317] gi|314940202|ref|ZP_07847375.1| DRTGG domain protein [Enterococcus faecium TX0133a04] gi|314941740|ref|ZP_07848619.1| DRTGG domain protein [Enterococcus faecium TX0133C] gi|314947616|ref|ZP_07851025.1| DRTGG domain protein [Enterococcus faecium TX0082] gi|314950602|ref|ZP_07853682.1| DRTGG domain protein [Enterococcus faecium TX0133A] gi|314992531|ref|ZP_07857952.1| DRTGG domain protein [Enterococcus faecium TX0133B] gi|314995314|ref|ZP_07860423.1| DRTGG domain protein [Enterococcus faecium TX0133a01] gi|68195911|gb|EAN10345.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus faecium DO] gi|257814349|gb|EEV43107.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus faecium 1,230,933] gi|257818011|gb|EEV45339.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus faecium 1,231,502] gi|257821406|gb|EEV48536.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus faecium 1,231,501] gi|257827572|gb|EEV54198.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus faecium 1,231,410] gi|257830403|gb|EEV57010.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus faecium 1,231,408] gi|260073615|gb|EEW61941.1| thioesterase superfamily protein [Enterococcus faecium C68] gi|260077463|gb|EEW65181.1| thioesterase superfamily protein [Enterococcus faecium TC 6] gi|289161623|gb|EFD09502.1| CBS domain-containing protein [Enterococcus faecium D344SRF] gi|291587319|gb|EFF19205.1| CBS domain protein [Enterococcus faecium E1071] gi|291591310|gb|EFF22976.1| CBS domain protein [Enterococcus faecium E1636] gi|291595920|gb|EFF27201.1| CBS domain protein [Enterococcus faecium E1679] gi|291597130|gb|EFF28329.1| CBS domain protein [Enterococcus faecium U0317] gi|291602903|gb|EFF33100.1| CBS domain protein [Enterococcus faecium E1039] gi|291605387|gb|EFF34834.1| CBS domain protein [Enterococcus faecium E1162] gi|313590471|gb|EFR69316.1| DRTGG domain protein [Enterococcus faecium TX0133a01] gi|313592991|gb|EFR71836.1| DRTGG domain protein [Enterococcus faecium TX0133B] gi|313597149|gb|EFR75994.1| DRTGG domain protein [Enterococcus faecium TX0133A] gi|313599512|gb|EFR78355.1| DRTGG domain protein [Enterococcus faecium TX0133C] gi|313640522|gb|EFS05102.1| DRTGG domain protein [Enterococcus faecium TX0133a04] gi|313645857|gb|EFS10437.1| DRTGG domain protein [Enterococcus faecium TX0082] Length = 443 Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust. Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 23/106 (21%) Query: 6 KLADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPEGRFVLTDLMVEG---- 61 ++AD I ++ +T+D+D +LE P+ +FV+ MV G Sbjct: 314 QIADTISDQISGNIHTIDTDREGNRLE--------------NPKFKFVVAPQMVNGVGTI 359 Query: 62 --GLLSSVSNDSAHQLALLEGKRSLAVHIASNCGLSFERIVQMYSD 105 G+LS + +D A + ++ KR++ + L + R++Q+ S+ Sbjct: 360 SFGVLSEIISDVAQKTMVMNQKRNILIE---QVNLHYLRLIQLESE 402 >gi|218700989|ref|YP_002408618.1| hypothetical protein ECIAI39_2679 [Escherichia coli IAI39] gi|218370975|emb|CAR18802.1| conserved hypothetical protein from phage origin [Escherichia coli IAI39] Length = 98 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 33/54 (61%) Query: 35 ERRIRHYKHVYSTPEGRFVLTDLMVEGGLLSSVSNDSAHQLALLEGKRSLAVHI 88 +R I + V S+ +GR V+ ++ +G + S++S A +A EG+R+LA+ + Sbjct: 22 QREIDDIRFVMSSEQGRRVVWSVLEKGRVFSAISPMDAMAMAFNEGQRNLALEL 75 >gi|117624711|ref|YP_853624.1| hypothetical protein APECO1_4042 [Escherichia coli APEC O1] gi|298381717|ref|ZP_06991316.1| conserved hypothetical protein [Escherichia coli FVEC1302] gi|301019344|ref|ZP_07183530.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|331648175|ref|ZP_08349265.1| conserved hypothetical protein [Escherichia coli M605] gi|115513835|gb|ABJ01910.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|294491431|gb|ADE90187.1| conserved hypothetical protein [Escherichia coli IHE3034] gi|298279159|gb|EFI20673.1| conserved hypothetical protein [Escherichia coli FVEC1302] gi|299882261|gb|EFI90472.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|309702811|emb|CBJ02142.1| hypothetical phage protein [Escherichia coli ETEC H10407] gi|320175045|gb|EFW50158.1| hypothetical protein SDB_02406 [Shigella dysenteriae CDC 74-1112] gi|323156132|gb|EFZ42291.1| hypothetical protein ECEPECA14_1907 [Escherichia coli EPECa14] gi|324008559|gb|EGB77778.1| hypothetical protein HMPREF9532_01746 [Escherichia coli MS 57-2] gi|327252183|gb|EGE63855.1| hypothetical protein ECSTEC7V_3030 [Escherichia coli STEC_7v] gi|331043035|gb|EGI15175.1| conserved hypothetical protein [Escherichia coli M605] gi|332344353|gb|AEE57687.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 98 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 33/54 (61%) Query: 35 ERRIRHYKHVYSTPEGRFVLTDLMVEGGLLSSVSNDSAHQLALLEGKRSLAVHI 88 +R I + V S+ +GR V+ ++ +G + S++S A +A EG+R+LA+ + Sbjct: 22 QREIDDIRFVMSSEQGRRVVWSVLEKGRVFSAISPMDAMAMAFNEGQRNLALEL 75 >gi|167752499|ref|ZP_02424626.1| hypothetical protein ALIPUT_00750 [Alistipes putredinis DSM 17216] gi|167659568|gb|EDS03698.1| hypothetical protein ALIPUT_00750 [Alistipes putredinis DSM 17216] Length = 343 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 27/46 (58%) Query: 4 FRKLADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPE 49 FR A+ + + L +GY V++ A A QLEE ++ +R HV + E Sbjct: 121 FRIWANKVLKEYLIKGYAVNNQAKAEQLEELKKTVRLLSHVLAAKE 166 >gi|89152429|ref|YP_512262.1| hypothetical protein PhiV10p08 [Escherichia phage phiV10] gi|74055452|gb|AAZ95901.1| hypothetical protein PhiV10p08 [Escherichia phage phiV10] Length = 98 Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 32/54 (59%) Query: 35 ERRIRHYKHVYSTPEGRFVLTDLMVEGGLLSSVSNDSAHQLALLEGKRSLAVHI 88 +R I + V S +GR V+ ++ +G + S++S A +A EG+R+LA+ + Sbjct: 22 QREIDDIRFVMSCEQGRRVVWSVLEKGRVFSAISPMDAMAMAFNEGQRNLALEL 75 >gi|186687127|ref|YP_001870270.1| helicase domain-containing protein [Nostoc punctiforme PCC 73102] gi|186469430|gb|ACC85229.1| helicase domain protein [Nostoc punctiforme PCC 73102] Length = 946 Score = 34.3 bits (77), Expect = 5.9, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 7 LADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPEGRFVLTDLMVEG 61 +AD ++ K+ +G + A+ +L EDER IR + + S P+ V TD + EG Sbjct: 502 VADALRQKLQKKGSQIRVIAITGELSEDEREIR-LEELKSYPQRVLVATDCLSEG 555 >gi|300898428|ref|ZP_07116769.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|300357895|gb|EFJ73765.1| conserved hypothetical protein [Escherichia coli MS 198-1] Length = 98 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 17/53 (32%), Positives = 32/53 (60%) Query: 36 RRIRHYKHVYSTPEGRFVLTDLMVEGGLLSSVSNDSAHQLALLEGKRSLAVHI 88 R I + V S+ +GR V+ ++ +G + S++S A +A EG+R+LA+ + Sbjct: 23 REIDDIRFVMSSEQGRRVVWSVLEKGRVFSAISPMDAMAMAFNEGQRNLALEL 75 >gi|229544102|ref|ZP_04433161.1| selenide, water dikinase [Bacillus coagulans 36D1] gi|229325241|gb|EEN90917.1| selenide, water dikinase [Bacillus coagulans 36D1] Length = 349 Score = 33.9 bits (76), Expect = 7.3, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 5/41 (12%) Query: 40 HYKHVYSTPEG-----RFVLTDLMVEGGLLSSVSNDSAHQL 75 H ++V PEG +++L+D + GGLL SV+ D A QL Sbjct: 281 HIENVVDFPEGMDQIDKWILSDAVTSGGLLLSVAGDEAEQL 321 >gi|27884137|emb|CAD61260.1| odd Oz/ten-m homolog 4 [Danio rerio] Length = 2192 Score = 33.9 bits (76), Expect = 7.5, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 27 LARQLEEDERRIRHYKHVYSTPEGR-FVLTDLMVEGGLLSSVSNDSAHQLALLEGKRSLA 85 +ARQ E R I +Y++ Y PEG VL D +G LL ++ + ++ GK S Sbjct: 1384 VARQTLETTRSIGYYRNTYRPPEGNATVLQDYSEDGLLLQTIHQGTGRRVIYKYGKLSRL 1443 Query: 86 VHI 88 + I Sbjct: 1444 LEI 1446 >gi|303239064|ref|ZP_07325594.1| peptidase S1 and S6 chymotrypsin/Hap [Acetivibrio cellulolyticus CD2] gi|302593402|gb|EFL63120.1| peptidase S1 and S6 chymotrypsin/Hap [Acetivibrio cellulolyticus CD2] Length = 424 Score = 33.9 bits (76), Expect = 8.5, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 9/101 (8%) Query: 14 KVLSRGYT-----VDSDALARQLEEDERRIRHYKHVYSTPEGRFV---LTDLMVEGGLLS 65 ++L RGY ++ ++ R+ + + R R + VY T V LT LMV GGL Sbjct: 7 RLLKRGYDNYEKFMNFNSAYRRDGKYDDRSRDGRRVYRTVALVLVCCILTSLMVGGGLYM 66 Query: 66 SVSNDSAHQLALLEGKRSLAVHIASNCGLSFERIVQMYSDN 106 +SND +L +L ++ A + N ++ E +++ SD+ Sbjct: 67 KLSND-IKELTMLSANQAKADTVIGNRAVNLESALKLASDS 106 Searching..................................................done Results from round 2 CONVERGED! >gi|254781212|ref|YP_003065625.1| hypothetical protein CLIBASIA_05595 [Candidatus Liberibacter asiaticus str. psy62] gi|254040889|gb|ACT57685.1| hypothetical protein CLIBASIA_05595 [Candidatus Liberibacter asiaticus str. psy62] gi|317120677|gb|ADV02500.1| hypothetical protein SC1_gp100 [Liberibacter phage SC1] gi|317120821|gb|ADV02642.1| hypothetical protein SC1_gp100 [Candidatus Liberibacter asiaticus] Length = 109 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 109/109 (100%), Positives = 109/109 (100%) Query: 1 MVNFRKLADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPEGRFVLTDLMVE 60 MVNFRKLADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPEGRFVLTDLMVE Sbjct: 1 MVNFRKLADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPEGRFVLTDLMVE 60 Query: 61 GGLLSSVSNDSAHQLALLEGKRSLAVHIASNCGLSFERIVQMYSDNPRY 109 GGLLSSVSNDSAHQLALLEGKRSLAVHIASNCGLSFERIVQMYSDNPRY Sbjct: 61 GGLLSSVSNDSAHQLALLEGKRSLAVHIASNCGLSFERIVQMYSDNPRY 109 >gi|315122899|ref|YP_004063388.1| hypothetical protein CKC_05775 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496301|gb|ADR52900.1| hypothetical protein CKC_05775 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 108 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 62/104 (59%), Positives = 80/104 (76%) Query: 1 MVNFRKLADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPEGRFVLTDLMVE 60 M++F+ +A+ IK+ L RGYTVD LA +LEEDE+R+R YK V++T G+ VL DLMVE Sbjct: 1 MIDFKAIAEKIKNTALGRGYTVDPVVLAERLEEDEKRLRLYKSVFATEAGKEVLIDLMVE 60 Query: 61 GGLLSSVSNDSAHQLALLEGKRSLAVHIASNCGLSFERIVQMYS 104 GGLLSS D A +LA EGKR++AV IAS+ GL+FE+IVQMYS Sbjct: 61 GGLLSSPEIDDALKLAHCEGKRAMAVRIASSLGLNFEQIVQMYS 104 >gi|315121937|ref|YP_004062426.1| hypothetical protein CKC_00935 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495339|gb|ADR51938.1| hypothetical protein CKC_00935 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 104 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 59/98 (60%), Positives = 74/98 (75%) Query: 7 LADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPEGRFVLTDLMVEGGLLSS 66 +A+ IK+ L RGYTVD LA +LEEDE+R+R YK V++T G+ VL DLMVEGGLLS Sbjct: 3 IAEKIKNTALGRGYTVDPVVLAERLEEDEKRLRLYKSVFATEAGKEVLIDLMVEGGLLSY 62 Query: 67 VSNDSAHQLALLEGKRSLAVHIASNCGLSFERIVQMYS 104 D A +LA EGKR++AV IAS+ GL+FE+IVQMYS Sbjct: 63 PEIDDALKLAHCEGKRAMAVRIASSLGLNFEQIVQMYS 100 >gi|317120720|gb|ADV02542.1| hypothetical protein SC2_gp100 [Liberibacter phage SC2] gi|317120781|gb|ADV02602.1| hypothetical protein SC2_gp100 [Candidatus Liberibacter asiaticus] Length = 90 Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats. Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 4/83 (4%) Query: 23 DSDALARQLEEDERRIRHYKHVYSTPEGRFVLTDLMVEGGLLSSVSNDSAHQLALLEGKR 82 D A ++E ++R YK V++T EGR+VL D+M EGGLL++ ++ LA EGKR Sbjct: 6 DEVEKAEKVE----QVRRYKSVFATFEGRWVLLDIMREGGLLATELSNDPIALARREGKR 61 Query: 83 SLAVHIASNCGLSFERIVQMYSD 105 ++A++I L E ++ Y + Sbjct: 62 TIALYITDLIALEAEELISAYRE 84 >gi|227355859|ref|ZP_03840252.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906] gi|227164178|gb|EEI49075.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906] Length = 104 Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 32/64 (50%) Query: 29 RQLEEDERRIRHYKHVYSTPEGRFVLTDLMVEGGLLSSVSNDSAHQLALLEGKRSLAVHI 88 +Q E+ + K V ST GR V+ L+ + G+ S ++ + +A EG+R+ + + Sbjct: 21 QQKNRQEKEEQQLKEVMSTEAGRAVIWRLISDSGVFRSSFSNDPYAMAFREGERNYGLKV 80 Query: 89 ASNC 92 + Sbjct: 81 FNQL 84 >gi|167041084|gb|ABZ05845.1| hypothetical protein ALOHA_HF400048F7ctg1g12 [uncultured marine microorganism HF4000_48F7] Length = 97 Score = 40.4 bits (93), Expect = 0.097, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 6/83 (7%) Query: 32 EEDERRIRHYKHVYSTPEGRFVLTDLMVEGGLLSSVSN-DSAHQLALLEGKRSLAVHIAS 90 E++++R+ Y+ ++ P+G+ VL+DL G+ + A +G+RS+ + + Sbjct: 5 EKEKKRLADYRTIFEGPQGQRVLSDLCHRHGIFDPCHVPGDPYSTAYNDGRRSVIIDLLR 64 Query: 91 NCGLSFER----IVQMYSD-NPR 108 G ER ++Q Y D +PR Sbjct: 65 YLGTDLERLDNLLIQPYGDYDPR 87 >gi|317152044|ref|YP_004120092.1| hypothetical protein Daes_0321 [Desulfovibrio aespoeensis Aspo-2] gi|316942295|gb|ADU61346.1| hypothetical protein Daes_0321 [Desulfovibrio aespoeensis Aspo-2] Length = 76 Score = 38.1 bits (87), Expect = 0.48, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 29/54 (53%) Query: 39 RHYKHVYSTPEGRFVLTDLMVEGGLLSSVSNDSAHQLALLEGKRSLAVHIASNC 92 R Y+ ++ + +G+ V+ DL G L S + + AL EG+RSL +H+ Sbjct: 10 RAYRRLFESTDGQTVMEDLEQRGSFLRSTFSTDPGRTALNEGRRSLVLHVKHML 63 >gi|291334463|gb|ADD94117.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1161] gi|291334660|gb|ADD94307.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C695] gi|291334714|gb|ADD94360.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C890] gi|291336440|gb|ADD95995.1| hypothetical protein [uncultured organism MedDCM-OCT-S04-C1073] Length = 78 Score = 36.9 bits (84), Expect = 0.94, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 41/66 (62%), Gaps = 2/66 (3%) Query: 29 RQLEEDERRIR-HYKHVYSTPEGRFVLTDLMVEGGLLSSVSND-SAHQLALLEGKRSLAV 86 +QLE +++R +Y+++++T EG+ VL+DL S+ + +H+ A +EG+RS+ + Sbjct: 5 KQLESLVKKLRENYQYIFNTDEGKEVLSDLEKRCHYHSTTNVKGDSHESAYMEGQRSVLL 64 Query: 87 HIASNC 92 I S Sbjct: 65 FIKSML 70 >gi|118590947|ref|ZP_01548347.1| hypothetical protein SIAM614_19841 [Stappia aggregata IAM 12614] gi|118436469|gb|EAV43110.1| hypothetical protein SIAM614_19841 [Stappia aggregata IAM 12614] Length = 104 Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 39 RHYKHVYSTPEGRFVLTDLMVEGGLLSSVSND-SAHQLALLEGKRSLAVHIASNCGLSFE 97 R Y+ V+ P+G VL DL E G+ + + L+G+++L I S + E Sbjct: 22 RAYRSVFLCPDGEIVLADLAAECGIYQAPPVNLEPRAGGYLDGRKALYARILSMIRIPPE 81 Query: 98 R 98 Sbjct: 82 E 82 >gi|290968646|ref|ZP_06560184.1| hypothetical protein HMPREF0889_0286 [Megasphaera genomosp. type_1 str. 28L] gi|290781299|gb|EFD93889.1| hypothetical protein HMPREF0889_0286 [Megasphaera genomosp. type_1 str. 28L] Length = 98 Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 32/73 (43%) Query: 29 RQLEEDERRIRHYKHVYSTPEGRFVLTDLMVEGGLLSSVSNDSAHQLALLEGKRSLAVHI 88 + E +++ V T EGR++ LM G N ++A EGKR++ ++ Sbjct: 7 EKTELEKKDELCIDTVLDTKEGRWLFMRLMEVTGFYQPSFNADPVKMAYQEGKRAVGQYL 66 Query: 89 ASNCGLSFERIVQ 101 + +RI + Sbjct: 67 LYELTRTEDRITK 79 >gi|291515047|emb|CBK64257.1| Fic/DOC family [Alistipes shahii WAL 8301] Length = 327 Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 27/46 (58%) Query: 4 FRKLADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPE 49 FR A+ I + L +GY V++ A A QLEE ++ +R HV + E Sbjct: 105 FRIWANKILKEYLIKGYAVNTQAKAEQLEELKKTVRLLSHVLAAKE 150 >gi|167752499|ref|ZP_02424626.1| hypothetical protein ALIPUT_00750 [Alistipes putredinis DSM 17216] gi|167659568|gb|EDS03698.1| hypothetical protein ALIPUT_00750 [Alistipes putredinis DSM 17216] Length = 343 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 27/46 (58%) Query: 4 FRKLADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPE 49 FR A+ + + L +GY V++ A A QLEE ++ +R HV + E Sbjct: 121 FRIWANKVLKEYLIKGYAVNNQAKAEQLEELKKTVRLLSHVLAAKE 166 >gi|295109628|emb|CBL23581.1| glycogen/starch/alpha-glucan phosphorylases [Ruminococcus obeum A2-162] Length = 755 Score = 34.6 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 12/113 (10%) Query: 9 DMIKSKVLSRGYTVDSDALARQL---------EEDERRIRHYKHVYSTPEGRFVLTD-LM 58 D + V+ G + D +A+ L +ED R +R Y+ + G ++ D M Sbjct: 197 DTVDESVIGDGISFDKKDIAKNLTLFLYPDDSDEDGRLLRIYQQYFMVSAGAQLILDECM 256 Query: 59 VEGGLLSSVSNDSAHQLALLEGKRSLA--VHIASNCGLSFERIVQMYSDNPRY 109 G L +++ +A Q+ + + + G+ FE VQ+ +D Y Sbjct: 257 ARGCNLHDLADYAAIQINDTHPSMVIPELIRLLGLHGIEFEEAVQIVTDTCAY 309 >gi|325094196|gb|EGC47506.1| DNA replication licensing factor mcm6 [Ajellomyces capsulatus H88] Length = 965 Score = 33.4 bits (75), Expect = 9.1, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Query: 5 RKLADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPEGRFVLTDLMVE 60 R LA+ I + ++R V+ D QL+ R R ++ V+ T E + +L + E Sbjct: 682 RNLAEHIVNVHMNRDDAVEPDLTTEQLQRYIRFARTFRPVF-TEEAKELLVEKYKE 736 >gi|225558412|gb|EEH06696.1| DNA replication licensing factor mcm6 [Ajellomyces capsulatus G186AR] Length = 965 Score = 33.4 bits (75), Expect = 9.1, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Query: 5 RKLADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPEGRFVLTDLMVE 60 R LA+ I + ++R V+ D QL+ R R ++ V+ T E + +L + E Sbjct: 682 RNLAEHIVNVHMNRDDAVEPDLTTEQLQRYIRFARTFRPVF-TEEAKELLVEKYKE 736 >gi|240274843|gb|EER38358.1| DNA replication licensing factor mcm6 [Ajellomyces capsulatus H143] Length = 965 Score = 33.4 bits (75), Expect = 9.4, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Query: 5 RKLADMIKSKVLSRGYTVDSDALARQLEEDERRIRHYKHVYSTPEGRFVLTDLMVE 60 R LA+ I + ++R V+ D QL+ R R ++ V+ T E + +L + E Sbjct: 682 RNLAEHIVNVHMNRDDAVEPDLTTEQLQRYIRFARTFRPVF-TEEAKELLVEKYKE 736 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.317 0.140 0.360 Lambda K H 0.267 0.0427 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,830,561,362 Number of Sequences: 14124377 Number of extensions: 63706898 Number of successful extensions: 207764 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 30 Number of HSP's successfully gapped in prelim test: 33 Number of HSP's that attempted gapping in prelim test: 207731 Number of HSP's gapped (non-prelim): 63 length of query: 109 length of database: 4,842,793,630 effective HSP length: 77 effective length of query: 32 effective length of database: 3,755,216,601 effective search space: 120166931232 effective search space used: 120166931232 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 76 (33.8 bits)