HHsearch alignment for GI: 254781213 and conserved domain: pfam05133

>pfam05133 Phage_prot_Gp6 Phage portal protein, SPP1 Gp6-like. This protein forms a hole, or portal, that enables DNA passage during packaging and ejection. It also forms the junction between the phage head (capsid) and the tail proteins. During SPP1 morphogenesis, Gp6 participates in the procapsid assembly reaction. This family also includes family Phage_min_cap, pfam05126.
Probab=97.28  E-value=0.015  Score=35.17  Aligned_cols=265  Identities=13%  Similarity=0.005  Sum_probs=132.7

Q ss_pred             HHHCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEEEEHHHEEEEECC--CCCEEEEEEEECCCHHHHHHHC
Q ss_conf             23147388999999998754103322216766654446605888655446661089--8887153200036977866631
Q gi|254781213|r  113 RSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNH--QNVVDSVYREFTFTVDQIVSKW  190 (556)
Q Consensus       113 ~~~snf~~~~~e~~~dL~~~Gta~l~i~~d~~~~~~~~~~rf~~~pl~~~~i~~d~--~G~vd~i~r~~~~t~~ql~~~f  190 (556)
T Consensus        87 ~~~n~~~~~~~~~~~~a~~~G~ay~~~y~d~d-----g~~~~~~~~p~~~~~i~d~~~~~~~~~~vr~~~~~~~~-----  156 (435)
T pfam05133        87 LDANDFDDKLSELHKDALIYGRAYELVYIDED-----GEPRIRVVSPEQAFPIYDDTIDRELAAAVRYYTDKDGD-----  156 (435)
T ss_pred             HHHCCHHHHHHHHHHHHHHCCCEEEEEEECCC-----CCEEEEEECCCEEEEEEECCCCCCEEEEEEEEEEECCC-----
T ss_conf             97267877999999999861757999998899-----97899998768489999789887635999999973684-----


Q ss_pred             CCCCCCHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-EECCCCCCCCCCEEEEEEEECCCCC
Q ss_conf             522357256654103555715666888535765655444532127765421376-4510178665874555114148721
Q gi|254781213|r  191 GDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDEN-RFFEEKQIATFPYIVGRYRVRADEI  269 (556)
Q Consensus       191 g~~~l~~~~~~~~~~~~~~~~~v~~~v~pr~~~~~~~~~~~~~~~sv~~~~~~~-~vl~e~g~~e~P~~~~Rw~~~~ge~  269 (556)
T Consensus       157 -------~~~-~--~e~y~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~g~vPvv~f~Nn--~~~~  210 (435)
T pfam05133       157 -------KTG-Y--YELYTDDEVYTYVREGG--------------GDLIEVDVIGERIPPHEFGRVPVVEFNNN--DLRS  210 (435)
T ss_pred             -------EEE-E--EEEEECCEEEEEEECCC--------------CCCCCCCCCCCCCCCCCCCCCCEEEECCC--CCCC
T ss_conf             -------589-9--99996898999994798--------------64112453345666688885265986258--5445


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC--C-EECCCCCCCCCCCCCCCCCCCCCC-CCCHHH
Q ss_conf             020269975889999999999999999975198689327863043--1-002476433245887655422000-122026
Q gi|254781213|r  270 YGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRN--F-DLKPGYMNIGALSREGRSLFQPVQ-FGNPLP  345 (556)
Q Consensus       270 YGrgp~~~aL~D~k~Ln~l~~~~l~~~~~~~~p~~~v~~~~~~~~--~-~l~pg~~~~~~~~~~~~~~~~p~~-~g~~~~  345 (556)
T Consensus       211 ~G~sd~e~v~~liDa~d~~~s~~~n~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~  290 (435)
T pfam05133       211 PGLSDLEPVKSLIDAYDKTLSEFANDFYDFPRAILVLKGYGEDDDEFVKDLKDAKLIRLLDGAEDDGDAKFLTKQFPVAS  290 (435)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHCCCEECCCCCCCCCCEEEEECCCCHHH
T ss_conf             68651777699999999998387788987420037741777665156787775143011366678997048805688689


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999997422210132466677779999999999999778887788789999999999999
Q gi|254781213|r  346 YHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDIL  414 (556)
Q Consensus       346 ~~~~i~~~~~~I~~~f~~d~~~~~~~~~~~TAtEv~~r~~e~~~~Lg~v~~rl~~E~l~Pli~r~~~il  414 (556)
T Consensus       291 ~e~~~~~l~~~i~~~s~~~~~~~~~f~~n~Sg~Alk~~~~~l~~ka-~~~e~~f~~~l~~~~~li~~~~  358 (435)
T pfam05133       291 LENYLDALKQDIYEFAMVPDLPDEYFGGNASGEALKAKYSLLDLKA-ERKERKFGEALRRLLRLALEIL  358 (435)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999983889999466088740999999998999999-9999999999999999999986