>pfam12236 Head-tail_con Bacteriophage head to tail connecting protein. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 516 and 555 amino acids in length. The head-tail connector, a dodecamer of gp10, is embedded within a unique five-fold vertex of the head. The connector serves as the site of assembly of the transient DNA packaging motor that translocates the dsDNA genome into a precursor head shell, or prohead.

Probab=100.00 E-value=0 Score=867.40 Aligned_cols=465 Identities=28% Similarity=0.439 Sum_probs=430.0 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCC----------CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHH Q ss_conf 999997235669999999985042289----------8777752542799999999998764188788760111081144 Q gi|254781213|r 13 FNYLKNQRGELNYWMEELTGFLYPYKN----------NAQLRMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAY 82 (556) Q Consensus 13 ~~~l~~~R~~~e~~w~e~~~y~lP~r~----------~~~~~i~dst~~~a~~~lAs~L~~~ltPp~~~WF~l~~~~~~~ 82 (556) T Consensus 1 y~~l~~~R~~~~~~w~e~a~~~lP~~~~~~~~~~~g~~~~~~i~dst~~~a~~~LAs~L~~~LtPp~~~wFrl~~~d~~~ 80 (480) T pfam12236 1 YEKLKSDRQSWESRWRECADYTLPSLDPFESDSNRGERRNTNIFDSTGARALRNLAAKLMSGLTPPGRPWFRLELRDDED 80 (480) T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC T ss_conf 96788768779999999999857776787788887443568864028999999999999861589999855700688656 Q ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEEEEHHHE Q ss_conf 44202322334899999999999999875023147388999999998754103322216766654446605888655446 Q gi|254781213|r 83 QAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNV 162 (556) Q Consensus 83 ~~~~~~~~~~~~ev~~~L~~v~~~i~~~~~~~~snf~~~~~e~~~dL~~~Gta~l~i~~d~~~~~~~~~~rf~~~pl~~~ 162 (556) T Consensus 81 ~-------~~~~ev~~~L~~ve~~~~~~--l~~Snf~~~~~e~~~dL~v~G~a~l~~~~d~-----~~~~~f~~~pl~~~ 146 (480) T pfam12236 81 N-------EAADEVKAWLDAVERRLMSV--LEASNFYVALHEAFKDLLVAGNALLYIEEDR-----KGVIRFEAVPLGSY 146 (480) T ss_pred H-------HHHHHHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHCCEEEEEECCC-----CCCCEEEEEECCEE T ss_conf 0-------13799999999999999999--9870559999999999984185589872356-----77623799631539 Q ss_pred EEEECCCCC-EEEEEEEECCCHHHHHHHCCCCCCCHHHHHHHCC--CCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEE Q ss_conf 661089888-7153200036977866631522357256654103--5557156668885357656554445321277654 Q gi|254781213|r 163 YMSVNHQNV-VDSVYREFTFTVDQIVSKWGDKVLSSKMKSALAR--NENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFV 239 (556) Q Consensus 163 ~i~~d~~G~-vd~i~r~~~~t~~ql~~~fg~~~l~~~~~~~~~~--~~~~~~~v~~~v~pr~~~~~~~~~~~~~~~sv~~ 239 (556) T Consensus 147 ~v~~d~~G~~vd~v~R~~~~t~~q~~~~f~~~~l~~~v~~~~~~~~~p~~~~~v~~~V~~~~d-----~~~~~~~~s~~~ 221 (480) T pfam12236 147 VVARDANGNVVDIVFRRFSLTVRQIVQRFGLDALSEEIRKALEDGEKPEDKVEIYHAVEPRAD-----DAKNMPFASYQE 221 (480) T ss_pred EEEECCCCCEEEEEEEEEECCHHHHHHHCCHHHCCHHHHHHHHCCCCCCCEEEEEEEEEECCC-----CCCCCCEEEEEE T ss_conf 999679999789999976324999998617121897788887527897865899999998467-----778996699999 Q ss_pred ECCCCE-ECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEC Q ss_conf 213764-5101786658745551141487210202699758899999999999999999751986893278630431002 Q gi|254781213|r 240 SVDENR-FFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLK 318 (556) Q Consensus 240 ~~~~~~-vl~e~g~~e~P~~~~Rw~~~~ge~YGrgp~~~aL~D~k~Ln~l~~~~l~~~~~~~~p~~~v~~~~~~~~~~l~ 318 (556) T Consensus 222 ~~~~~~~~l~e~g~~~~P~~~~Rw~~~~ge~YGrgp~~~~l~d~k~l~~l~~~~~~~~~~a~~p~~~v~~~~~~~~~~l~ 301 (480) T pfam12236 222 DAGKDVGVLSESGYDEFPYLVPRWEKIDGEAYGRSPVEDALPDVKSLNKLSEALLKAAAKASKPPWLVPPSGVTQPRDLV 301 (480) T ss_pred ECCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEC T ss_conf 76885303441478878666677873799865708699986899999999999999998742685785765454741403 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH Q ss_conf 476433245887655422000122026-9999999999999974222101324666777799999999999997788877 Q gi|254781213|r 319 PGYMNIGALSREGRSLFQPVQFGNPLP-YHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGG 397 (556) Q Consensus 319 pg~~~~~~~~~~~~~~~~p~~~g~~~~-~~~~i~~~~~~I~~~f~~d~~~~~~~~~~~TAtEv~~r~~e~~~~Lg~v~~r 397 (556) T Consensus 302 ~~~~~~i~~g~~~~~~~~p~~~~~~~~~~~~~i~~~~~~I~~af~~d~~~~-~~~~~~TAtEV~~r~~E~~~~LGpv~~r 380 (480) T pfam12236 302 PGGTGYVVTGVAGDIGIKPLEKYADFQVAQAVIQDIRQRIREAFMVDLFQM-RDAERVTATEVRERAEEKEQLLGPVYSR 380 (480) T ss_pred CCCCCEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 578844742687776500055678744999999999999999998753147-7888777999999999999876078899 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC Q ss_conf 88789999999999999873999878711135652368883379999853676999999999999875422787898735 Q gi|254781213|r 398 LQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHM 477 (556) Q Consensus 398 l~~E~l~Pli~r~~~il~r~g~lp~~p~~~~~~~~~~~v~y~s~La~aq~~~~~~~~~~~l~~~~~~~~~~~~p~~~d~~ 477 (556) T Consensus 381 l~~E~l~Pli~r~~~il~r~g~lp~~p~~~-g--~~v~i~~~s~La~aqr~~~~~~i~~~~~~~~~l~--~~~p~~~d~i 455 (480) T pfam12236 381 LQEEFLSPLIERTFNILQRAGMLPPPPDEL-G--VAVKVEYVTGLAAAQRAIDLASLERFLQAIGQLA--QLKPEVLDKI 455 (480) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCHHH-C--CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHC T ss_conf 999999999999999999779999992460-8--8532899639999763556999999999999871--7996898736 Q ss_pred CHHHHHHHHHHHCCCCHHHCCCHHH Q ss_conf 9899999999970998546199899 Q gi|254781213|r 478 DTDRVSRFSLWATNTPAVLIRDTAE 502 (556) Q Consensus 478 d~d~~~~~~a~~~Gvp~~~~r~~ee 502 (556) T Consensus 456 d~d~~~~~~a~~~Gvp~~l~rs~ee 480 (480) T pfam12236 456 DWDEAVDRLADALGVPAGLLRSEEE 480 (480) T ss_pred CHHHHHHHHHHHCCCCHHHCCCCCC T ss_conf 9999999999980988423089899

HHsearch alignment for GI: 254781213 and conserved domain: pfam12236