BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781213|ref|YP_003065626.1| head-to-tail joining protein,
putative [Candidatus Liberibacter asiaticus str. psy62]
(556 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254781213|ref|YP_003065626.1| head-to-tail joining protein, putative [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040890|gb|ACT57686.1| head-to-tail joining protein, putative [Candidatus Liberibacter
asiaticus str. psy62]
gi|317120678|gb|ADV02501.1| putative phage-related head-to-tail joining protein [Liberibacter
phage SC1]
gi|317120822|gb|ADV02643.1| putative phage-related head-to-tail joining protein [Candidatus
Liberibacter asiaticus]
Length = 556
Score = 1163 bits (3008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/556 (100%), Positives = 556/556 (100%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLRMWDTTGSEACIKLSSL 60
MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLRMWDTTGSEACIKLSSL
Sbjct: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLRMWDTTGSEACIKLSSL 60
Query: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG
Sbjct: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
Query: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT
Sbjct: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS 240
FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS
Sbjct: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS 240
Query: 241 VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSL 300
VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSL
Sbjct: 241 VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSL 300
Query: 301 HPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSL 360
HPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSL
Sbjct: 301 HPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSL 360
Query: 361 FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNL 420
FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNL
Sbjct: 361 FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNL 420
Query: 421 PECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTD 480
PECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTD
Sbjct: 421 PECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTD 480
Query: 481 RVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGR 540
RVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGR
Sbjct: 481 RVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGR 540
Query: 541 AMEKKLTHDMMENSYG 556
AMEKKLTHDMMENSYG
Sbjct: 541 AMEKKLTHDMMENSYG 556
>gi|315121938|ref|YP_004062427.1| head-to-tail joining protein, putative [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495340|gb|ADR51939.1| head-to-tail joining protein, putative [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 555
Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/551 (72%), Positives = 455/551 (82%)
Query: 5 SAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLRMWDTTGSEACIKLSSLLSSL 64
S K I+ F +LK+QR ELN MEELT LYPYK + RMWDTTGSEACIKLSSLLSSL
Sbjct: 4 SIKKIKTCFEHLKSQREELNTRMEELTSLLYPYKQEPKSRMWDTTGSEACIKLSSLLSSL 63
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQS 124
ITPPGQKWHGL+E F +QAFLY+EDA +KK+R WCDQVTD LFGFRERSRSGFV CLQS
Sbjct: 64 ITPPGQKWHGLSEPFFRHQAFLYEEDAGAKKIRGWCDQVTDVLFGFRERSRSGFVSCLQS 123
Query: 125 FYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVD 184
FYTS+VEFGTGCFY+EADVDE GLEEGIRYI+VPL++VY+SVNHQN VDS+YR F FT +
Sbjct: 124 FYTSIVEFGTGCFYIEADVDETGLEEGIRYIAVPLADVYLSVNHQNEVDSIYRTFEFTAE 183
Query: 185 QIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDEN 244
QI KWG KVLS KMKS+ + E ++F IIHAVYPKSL +KKKDKGNK FHSKFV +DEN
Sbjct: 184 QIGGKWGYKVLSDKMKSSYEKKEPDKFKIIHAVYPKSLAEKKKDKGNKNFHSKFVCIDEN 243
Query: 245 RFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPT 304
FFEEKQI T PYI+GRYRVRADEIYG+SPAMEALP IRRLNE NELAQ+ RLSLHP
Sbjct: 244 VFFEEKQITTLPYIIGRYRVRADEIYGKSPAMEALPAIRRLNEISNELAQYARLSLHPAY 303
Query: 305 IAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLD 364
+A EAKQ F K YMNIGA+S++G++LFQP+Q GNPLP++EEL R++ SI SLFLLD
Sbjct: 304 LAPPEAKQLEFKNKSRYMNIGAMSKDGKALFQPLQVGNPLPFYEELKRIQGSIHSLFLLD 363
Query: 365 LFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECE 424
LFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI RELDILD+Q NLPE
Sbjct: 364 LFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIKRELDILDAQHNLPELT 423
Query: 425 GADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSR 484
D+ P LLKVEYTSPLFKYQQAESVAS LQG NTV+ELG KTG+P MDH+D D+VSR
Sbjct: 424 DYDHSPFHLLKVEYTSPLFKYQQAESVASVLQGTNTVLELGAKTGNPEPMDHIDIDKVSR 483
Query: 485 FSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEK 544
F+LWA+ +PA LIRD EV+ R+ R+ Q M+ + QQ +Q + GAKA +A+EK
Sbjct: 484 FALWASGSPAHLIRDVDEVKQRRKDRDDQMEAMQNRQDAQQQEQMGMEAGAKAVSKAIEK 543
Query: 545 KLTHDMMENSY 555
K+T+D+MENSY
Sbjct: 544 KMTNDLMENSY 554
>gi|315122900|ref|YP_004063389.1| head-to-tail joining protein, putative [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496302|gb|ADR52901.1| head-to-tail joining protein, putative [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 555
Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/551 (71%), Positives = 456/551 (82%)
Query: 5 SAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLRMWDTTGSEACIKLSSLLSSL 64
S K I+ F +LK+QR ELN MEELT LYPYK + RMWDTTGSEACIKLSSLLSSL
Sbjct: 4 SIKKIKTCFEHLKSQREELNTRMEELTSLLYPYKQEPKSRMWDTTGSEACIKLSSLLSSL 63
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQS 124
ITPPGQKWHGL+E F +QAFLY+EDA +KK+R WCDQVTD LFGFRERSRSGFV CLQS
Sbjct: 64 ITPPGQKWHGLSEPFFRHQAFLYEEDAGAKKIRGWCDQVTDVLFGFRERSRSGFVSCLQS 123
Query: 125 FYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVD 184
FYTS+VEFGTGCFY+EADVDE GLEEGIRYI+VPL++VY+SVNHQN VDS+YR F FT +
Sbjct: 124 FYTSIVEFGTGCFYIEADVDETGLEEGIRYIAVPLADVYLSVNHQNEVDSIYRTFEFTAE 183
Query: 185 QIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDEN 244
QI KWG KVLS KMKS+ + E ++F IIHAVYPKSL +KKKDKGNK FHSKFV +DEN
Sbjct: 184 QIGGKWGYKVLSDKMKSSYEKKEPDKFKIIHAVYPKSLAEKKKDKGNKNFHSKFVCIDEN 243
Query: 245 RFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPT 304
FFEEKQI T PYI+GRYRVRADEIYG+SPAMEALP IRRLNE NELAQ+ RLSLHP
Sbjct: 244 VFFEEKQITTLPYIIGRYRVRADEIYGKSPAMEALPAIRRLNEISNELAQYARLSLHPAY 303
Query: 305 IAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLD 364
+A +EAKQ F +K ++N GA+S++G++LFQP+Q GNPLP++EEL R++ SI SLFLLD
Sbjct: 304 LAPTEAKQLEFKIKSRHINTGAMSKDGKALFQPLQVGNPLPFYEELKRIQGSIHSLFLLD 363
Query: 365 LFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECE 424
LFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI RELDILD+Q NLPE
Sbjct: 364 LFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIKRELDILDAQHNLPELT 423
Query: 425 GADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSR 484
D+ P LLKVEYTSPLFKYQQAESVAS LQG NTV+ELG KTG+P MDH+D D+VSR
Sbjct: 424 DYDHSPFHLLKVEYTSPLFKYQQAESVASVLQGTNTVLELGAKTGNPEPMDHIDIDKVSR 483
Query: 485 FSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEK 544
F+LWA+ +PA LIRD EV+ R+ R+ Q M+ + QQ +Q + GAKA +A+EK
Sbjct: 484 FALWASGSPAHLIRDVDEVKQRRKDRDDQMEAMQNRQDAQQQEQMGMEAGAKAVSKAIEK 543
Query: 545 KLTHDMMENSY 555
K+T+D+MENSY
Sbjct: 544 KMTNDLMENSY 554
>gi|317120721|gb|ADV02543.1| putative phage-related head-to-tail joining protein [Liberibacter
phage SC2]
gi|317120782|gb|ADV02603.1| putative phage-related head-to-tail joining protein [Candidatus
Liberibacter asiaticus]
Length = 539
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/545 (40%), Positives = 312/545 (57%), Gaps = 28/545 (5%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQ--LRMWDTTGSEACIKLSS 59
N+ K + RF LK QR E+ +E+ + PY+ A ++WDTT + A KL+S
Sbjct: 14 NKEFIKKLIARFESLKAQRSEIEPIRQEIIDLVCPYRGKASEDKKIWDTTATSASDKLAS 73
Query: 60 LLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFV 119
LL +LITP G +WHGL +F ++ +K +RE CD LF RE SGF
Sbjct: 74 LLHNLITPFGSRWHGLVAPDPQSGSFFASQE--NKLIREQCDHFVMELFAQRELPASGFN 131
Query: 120 GCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREF 179
CL+ FYT VV FG GCFY+ E G G+RYISVP+S++ S NH+NVVD+V+ EF
Sbjct: 132 LCLKDFYTEVVLFGMGCFYVSER--EGG---GLRYISVPVSSIVCSANHENVVDTVFEEF 186
Query: 180 TFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFV 239
+ T + + KWG LS KMK L R++ +++ AV+P DK+ D +G+ V
Sbjct: 187 SLTPENVAKKWGYDALSDKMKEDLDRSDPQKYEFFQAVFP----DKEDD--YEGYKKVIV 240
Query: 240 SVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLS 299
S+DENR EE PYIVGRY +G SP +ALP+IRRLN ++ + +
Sbjct: 241 SIDENRIIEEGYHRVMPYIVGRYEASPSNPFGYSPTHKALPSIRRLNALSASVSLYSEKA 300
Query: 300 LHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG-NPLPYHEELNRLKESIR 358
L+P + + + + F KP +N G + R+GR P G + P HEE+ RL+ IR
Sbjct: 301 LNPAVLTSEDTRGKTFSTKPKTVNHGWMDRQGRPRAVPFFTGSDARPSHEEMQRLQMQIR 360
Query: 359 SLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDIL-DSQ 417
L+LLDLFQVL D+ASRSA ESMEKT EKG F+ ++GGLQ+EF+G+M+ RE+DIL Q
Sbjct: 361 ELYLLDLFQVLADRASRSATESMEKTLEKGIFISAIVGGLQAEFVGSMVKREIDILYQDQ 420
Query: 418 GNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHM 477
G++ G D LKV YTSPL+KYQ+AE + +QG+ E+ TGDP+ +
Sbjct: 421 GDI-RGLGKD------LKVSYTSPLYKYQKAEELNGIVQGIRVNAEIASMTGDPTPLMMF 473
Query: 478 DTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQR-EVQRRVMEEQHLQQQLQQTSQDIGAK 536
+ +++ + P VL+ ED +Q+ E Q++ Q Q ++++ + GA
Sbjct: 474 NPYLCGKYAADGSGVPEVLVLSE---EDTKQKLIEKQKQAEASQMKQLTMEESIKTGGAI 530
Query: 537 AAGRA 541
A RA
Sbjct: 531 AQDRA 535
>gi|262043663|ref|ZP_06016772.1| hypothetical protein HMPREF0484_3791 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039001|gb|EEW40163.1| hypothetical protein HMPREF0484_3791 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 554
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/466 (28%), Positives = 229/466 (49%), Gaps = 33/466 (7%)
Query: 47 DTTGSEACIKLSSLLSSLITPPGQKWHGLA-ESFSAYQAFLYKEDARSKKVREWCDQVTD 105
D TG+ A K + + S+ITP QKWH L+ E F A ++V+ + +V D
Sbjct: 65 DATGALALQKFGAAIESVITPRTQKWHTLSNERF-----------ANDEEVQRYFQEVRD 113
Query: 106 TLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMS 165
LF R + F Y S FGTGC +++ + + G RY + L +Y +
Sbjct: 114 ILFRLRYAPWANFASQSHEHYISSGAFGTGCTFVDNVIGK-----GPRYCTYHLREIYFT 168
Query: 166 VNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTD- 224
N Q ++D V+R++ T Q + ++G++ L ++++ + +++F +H V P D
Sbjct: 169 ENFQGMIDVVHRKYCMTARQAIQQFGEENLPQQVRTTARNDPSKQFNFLHRVEPNDKRDM 228
Query: 225 KKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRR 284
++DK F S + ++ ++ +E + PY + RY E+YGRSPAM LP I+
Sbjct: 229 SRQDKEGMPFRSVHICMEGSKIVQEGGYWSQPYAISRYYTAPGEVYGRSPAMVVLPDIKL 288
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPL 344
LNE + + ++++ PP + + + F + PG +N G ++R+G+ L P+
Sbjct: 289 LNEINRAIIEGAQMAVRPPMLLPEDGILQPFKMMPGALNFGGMNRDGKPLALPLNTATDF 348
Query: 345 PYHEELNRLK-ESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFI 403
L K ++I F + LFQ+L D +A E+M + +EKG + P G +Q+EF+
Sbjct: 349 SVAMTLAEQKRQTINDGFFITLFQILVDNPQMTATEAMLRAQEKGQLLAPTAGRIQAEFL 408
Query: 404 GAMISRELDILDSQGNLPECEGADNPPVSL------LKVEYTSPLFKYQQAESVASALQG 457
G +I RE+DI G LPE PP L +EYTSPL + Q +E + +
Sbjct: 409 GTLILREIDIAYQNGLLPE------PPEQLKEIGGEYDIEYTSPLVRLQMSEEASGIMNV 462
Query: 458 VNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEV 503
VN +G D + ++ D RF A+ P +++ E+
Sbjct: 463 VNAAGTIG--QFDQNIARTLNGDAALRFIAKASGAPLQVVKTEDEM 506
>gi|48697195|ref|YP_024925.1| hypothetical protein BcepC6B_gp05 [Burkholderia phage BcepC6B]
gi|47779001|gb|AAT38364.1| gp05 [Burkholderia phage BcepC6B]
Length = 549
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 224/451 (49%), Gaps = 31/451 (6%)
Query: 44 RMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQV 103
+M+D+T A + + S+ITP Q WH L A V+ + V
Sbjct: 61 KMFDSTAPLALRNFVAAMDSMITPATQLWHRLKTGNDALNEI--------ASVKAYLQGV 112
Query: 104 TDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVY 163
TLF R R + GFV + + Y S+ FG G +E DV + GI Y +VP+ ++
Sbjct: 113 VRTLFAARYRWQGGFVTQMGATYQSIGLFGPGALMIEHDVGK-----GIVYRNVPMQRLW 167
Query: 164 MSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLT 223
+ N+ ++D + ++ T+ Q ++G + LS M+S L ++ + HAV P++
Sbjct: 168 FAENNSGLIDKTHVQWELTLRQAAQRFGRENLSPSMQSTLEKDPEKSAIFYHAVEPRADR 227
Query: 224 DKKK-DKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
D +K D N F S ++ +R + TFP+ +GR+ V D++YG SPA +A+P +
Sbjct: 228 DPRKLDGRNMQFASYWLDEGRDRIVQNSGFRTFPFAIGRFYVGTDDVYGGSPAYDAMPDV 287
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
R N+ + + + PP +A + FDL+ G +N G L+ +G + +P+ G
Sbjct: 288 RMANDMAKTNIRGAQKLVDPPLLANEDGVLDGFDLRSGALNWGGLNDKGEEMVKPLLTGK 347
Query: 343 PLPYHEELNR-LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
E + +++I F + LFQ+L D +A E +++ +EKG + P +G QSE
Sbjct: 348 QAQIGIEFAQDTRQTINQWFYVTLFQILVDSGDMTATEVLQRAQEKGVLLAPTLGRTQSE 407
Query: 402 FIGAMISRELDILDSQGNLPEC------EGADNPPVSLLKVEYTSPLFKYQQAESVASAL 455
+G MI+RE+DIL G LP+ GAD + VEY SPL K +A A+ L
Sbjct: 408 LLGPMIAREVDILAEAGQLPDMPQELIDAGAD------VDVEYDSPLNKAMRAGEGAAIL 461
Query: 456 QGVNTVVELGVKTG-DPSCMDHMDTDRVSRF 485
Q + +LG+ + DP+ + R++R
Sbjct: 462 QWLQ---QLGIVSQFDPAAAKVPNGARIARL 489
>gi|221213955|ref|ZP_03586928.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221166132|gb|EED98605.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
Length = 549
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 217/451 (48%), Gaps = 31/451 (6%)
Query: 44 RMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQV 103
RM+D+T A + + S+ITP Q WH L S A V+ + V
Sbjct: 61 RMFDSTAPLALRNFVAAMDSMITPATQVWHRLKTSNDALNEV--------PSVKAYLQAV 112
Query: 104 TDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVY 163
LF R R + GF + + Y S+ FG G +E DV GI Y +VP+ ++
Sbjct: 113 VRALFAVRYRWQGGFTTQMGATYQSIGLFGPGALMIEHDVGH-----GIVYRNVPMQRLW 167
Query: 164 MSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLT 223
+ N+ ++D + + T+ Q ++G + LS M++AL R+ + T H V P++
Sbjct: 168 FAENNAGLIDKTHVLWRLTLRQAAQRFGRENLSPSMQTALERDPEKTHTFYHVVEPRADR 227
Query: 224 DKKK-DKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
D +K D N F S ++ +R + TFP+ +GR+ V D++YG SPA +A+P I
Sbjct: 228 DPRKLDGRNMRFGSYWLDEGRDRIIQNSGFRTFPFAIGRFYVGTDDVYGGSPAYDAMPDI 287
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
R N+ + + + PP +A + FDL+ G +N G L G + +P+ G
Sbjct: 288 RMANDMAKTNIRGAQKMVDPPLLASEDGVLEGFDLRSGSLNWGGLDERGNEMVKPLLTGK 347
Query: 343 PLPYHEELNR-LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
E ++ +++I F + LFQ+L D +A E +++ +EKG + P +G Q+E
Sbjct: 348 QAQIGIEFSQDTRQTINQWFYVTLFQILVDSGDMTATEVLQRAQEKGVLLAPTLGRTQAE 407
Query: 402 FIGAMISRELDILDSQGNLPEC------EGADNPPVSLLKVEYTSPLFKYQQAESVASAL 455
+G +I RE+DIL G P GAD + VEY SPL K +A A+ L
Sbjct: 408 LLGPLIQREVDILAEAGQFPPMPQELIDAGAD------VDVEYDSPLNKAMRAGEGAAIL 461
Query: 456 QGVNTVVELGVKTG-DPSCMDHMDTDRVSRF 485
Q + +LGV DP+ ++ R+ +
Sbjct: 462 QWLQ---QLGVVAQFDPNAAKLVNGHRIGKL 489
>gi|221201497|ref|ZP_03574536.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
gi|221207947|ref|ZP_03580953.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221172132|gb|EEE04573.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221178765|gb|EEE11173.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
Length = 549
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 207/415 (49%), Gaps = 15/415 (3%)
Query: 44 RMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQV 103
RM+D+T A + + S+ITP Q WH L S + E+A V+ + +V
Sbjct: 61 RMFDSTAPLALRNFVAAMDSMITPATQLWHRLKASND-----VLNENA---AVKAYLQEV 112
Query: 104 TDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVY 163
LF R R + GFV + + Y SV FG G +E DV + GI Y +VP+ ++
Sbjct: 113 VRVLFAVRYRWQGGFVTQMGATYQSVGLFGPGALMIEHDVGQ-----GIVYRNVPMQRLW 167
Query: 164 MSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLT 223
+ N+ ++D + ++ T+ Q ++G + LS M+SAL R+ + H V P++
Sbjct: 168 FAENNAGIIDKTHVQWELTLRQAAQRFGRENLSPSMQSALERDPEKSAIFYHIVEPRADR 227
Query: 224 DKKK-DKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
D +K D N F S ++ +R + TFP+ +GR+ V + YG SPA +A+P
Sbjct: 228 DPRKLDGRNMRFGSYWLDEGRDRIIQNSGFRTFPFAIGRFYVGTGDAYGGSPACDAMPDT 287
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
R +N+ + + + PP + + FDL+ G +N G L +G + +P+ G
Sbjct: 288 RMVNDMAKTNIRGAQKLVDPPLLVSEDGSLEGFDLRSGSLNWGGLDEKGNEMVKPLLMGK 347
Query: 343 PLPYHEELNR-LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
E + +++I F + LFQ+L D +A E +++ +EKG + P +G QSE
Sbjct: 348 QAQIGIEFTQDTRQTINQWFYVTLFQILVDSGDMTATEVLQRAQEKGVLLAPTLGRTQSE 407
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQ 456
+G +I RELDIL LPE + +++EY SPL K +A A+ LQ
Sbjct: 408 LLGPLIERELDILAEAAQLPEMPRELINAGANVEIEYDSPLNKAMRAGESAATLQ 462
>gi|242279813|ref|YP_002991942.1| hypothetical protein Desal_2347 [Desulfovibrio salexigens DSM 2638]
gi|242122707|gb|ACS80403.1| conserved hypothetical protein [Desulfovibrio salexigens DSM 2638]
Length = 555
Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 150/523 (28%), Positives = 242/523 (46%), Gaps = 56/523 (10%)
Query: 16 LKNQRGELNYW---MEELTGFLYPYK--------NNAQLR---MWDTTGSEACIKLSSLL 61
L+ R E N W ++++ ++ P K N+ ++R + D+T + A L++ L
Sbjct: 13 LQGLRQERNSWESHWQDISDYILPRKGVYDGHRPNDGRVRSGKIIDSTATRALRILAAGL 72
Query: 62 SSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGC 121
+T P + W L S ++ AR K VREW +V +T++ R +RS F C
Sbjct: 73 QGGLTSPARPWFRLGIS--------DRDLARHKSVREWISKVENTMY--RALARSNFYSC 122
Query: 122 LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTF 181
+ S YT + FGTG Y E D DE+G IR+ ++ ++ + Q VD+VYREF
Sbjct: 123 IHSLYTELAGFGTGILYCEPD-DERG----IRFRTLTAGEYCLATDAQGRVDTVYREFKM 177
Query: 182 TVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTD-KKKDKGNKGFHSKF-V 239
T Q+ ++G + L + + S+L N + F ++H V P+ D D N F S F +
Sbjct: 178 TARQLEKRFGMQNLPATVHSSLNMNRDHWFDVLHVVQPRDEFDIALMDTMNMPFESVFLL 237
Query: 240 SVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLS 299
+ E PY+ R+ A ++YGRSPAM+ L ++ L E Q L+
Sbjct: 238 NGHGGHVLSESGFMENPYMAPRWDTSAMDVYGRSPAMDVLADVKMLMEMSKSQIQAVHLT 297
Query: 300 LHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP--LPYHEELNRLKESI 357
L PP + V R +L PG N + + + P+ P ++ ++ +I
Sbjct: 298 LRPP-MKVPSMYSRRLNLLPGGQN--PVEQNQQDSVSPLYQVRPDLAGVSNKIQDVRTAI 354
Query: 358 RSLFLLDLFQVLDDKASR--SAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILD 415
R F D+F ++ R +AAE E+ EK +GP+I +E + +I R IL
Sbjct: 355 REGFYNDIFMMMAGTNRRTITAAEVAERHEEKLIQLGPVIERQHTELLDPLIDRVFGILM 414
Query: 416 SQGNLPEC----EGADNPPVSLLKVEYTSPLFKYQQ---AESVASALQGVNTVVELGVKT 468
G LPE EGAD +K++Y S L + Q+ +S+ S Q V + +
Sbjct: 415 RSGQLPEAPSVLEGAD------IKIDYISVLAQAQKMVGTQSIQSLAQFVGNLAK----- 463
Query: 469 GDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQRE 511
+P +D +D DR P ++R EVE +R R+
Sbjct: 464 ANPEVLDKVDMDRAVDDYAELIGVPNGIVRSGDEVEKLRNMRK 506
>gi|42526662|ref|NP_971760.1| head-to-tail joining protein, putative [Treponema denticola ATCC
35405]
gi|41816855|gb|AAS11641.1| head-to-tail joining protein, putative [Treponema denticola ATCC
35405]
Length = 560
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 214/469 (45%), Gaps = 34/469 (7%)
Query: 51 SEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGF 110
SE KL S L P W L S + + Y V++W +Q L+
Sbjct: 64 SEYLKKLVSGLMGYTISPNVTWLKL--SLNNTEMLEYA------GVKDWLEQSEKALY-- 113
Query: 111 RERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQN 170
E +R+ + F ++ FG G +DEK E IR++++ +Y++ N
Sbjct: 114 EEFNRNNLYSQVSLFISNAASFGHGVML----IDEKK-ENSIRFLTIAEPEIYIAENEYG 168
Query: 171 VVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALA--RNENERFTIIHAVYPKSLTDKKK- 227
+D+V+R F+ TV I++++G++ +S ++K+ + +N+ I+HAV P+ D+ K
Sbjct: 169 DIDTVFRYFSMTVKNIIARFGEENVSEQIKNDAKDIKGKNKEIKILHAVLPRDDYDESKL 228
Query: 228 DKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNE 287
D N F S ++ +D N EE PY V + YG SPA EA+P +R LN+
Sbjct: 229 DGKNMEFASYYIDMDNNTILEESGYYELPYSVFIWEKETSSAYGGSPAREAIPDMRLLNK 288
Query: 288 TVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYH 347
+ +L PP + + GY + P+ G P
Sbjct: 289 VEEARLKLAQLVSEPPMNVPDSMRGFESVVPAGY----NYYERPDMIMTPINIGANFPIT 344
Query: 348 -EELNRLKESIRSLFLLDLFQVLDDK-ASRSAAESMEKTREKGAFVGPLIGGLQSEFIGA 405
E + ++ +R F +D +L + A ++A E +E EK A + LI Q++ +
Sbjct: 345 LETIQDIESRLRDKFHVDFMLMLQAQTAQKTATEVIELQGEKSALLSSLIVN-QNKALSE 403
Query: 406 MISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLF----KYQQAESVASALQGVNTV 461
++ R L+I+ QG PE N ++L V++ PL +Y Q V ++L +
Sbjct: 404 IVIRTLNIMYRQGRFPEPPNILNGSDAVLNVDFVGPLAQAQKRYHQTGGVQTSLAISQPI 463
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQR 510
+++ +P +D++DTD++ + L P IR+ EVE IRQQR
Sbjct: 464 IQM-----NPEVLDYIDTDKLLKNVLDTNGFPQSAIREDDEVEKIRQQR 507
>gi|291334411|gb|ADD94066.1| hypothetical protein ALOHA_HF400048F7ctg1g11 [uncultured phage
MedDCM-OCT-S04-C1035]
Length = 467
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 212/449 (47%), Gaps = 41/449 (9%)
Query: 64 LITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQ 123
++T P W L F ++ + + W + T+ ++ ++S F +
Sbjct: 1 MLTNPSTPWFSLK--------FKNEDMEGEDEAKLWLESATEVMYS--AFNQSNFQQEIF 50
Query: 124 SFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTV 183
Y ++ FGT ++E D DE L+ R+I+ +Y+S N + +D+V+R+F +
Sbjct: 51 ELYHDLITFGTAAMFIEED-DEDNLKFSTRHIN----EIYISENEKGRIDTVFRKFRISA 105
Query: 184 DQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKS-LTDKKKDKGNKGFHSKFVSVD 242
+ K+G+ +S+ + ++ E I+HAVYP+ KK+D N F S ++ D
Sbjct: 106 RAAIRKFGN--VSNNIAVIAKKDPYEEVEILHAVYPRDDYNPKKQDTENMQFESIYLDAD 163
Query: 243 ENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHP 302
FP++V RY + EIYGRSPAM ALP ++ LNE + + + + P
Sbjct: 164 SGEELSVSGFREFPFVVPRYLKASHEIYGRSPAMTALPDVKMLNEMSKTIIKSAQKQVDP 223
Query: 303 PTIAVSEAKQRNFDLKPGYMNIGALSREG-RSLFQPVQFG--NPLPYHEELNRLKESIRS 359
P + + PG +N R G R +P+ G N L + E R + SIR+
Sbjct: 224 PLLVPDDGFLLPVRTVPGGLN---FYRAGTRDRIEPLNIGANNTLGLNMEEQR-RNSIRN 279
Query: 360 LFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGN 419
F ++ ++ D +A E +++ EK +GP++G LQSE + +I R IL + N
Sbjct: 280 AFYVNQL-MMQDGPQMTATEVIQRNEEKMRLLGPVLGRLQSELLKPLIDRSFAIL-MRRN 337
Query: 420 L----PE-CEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCM 474
L PE G D +++EY SPL K Q++ ++S ++ + +G +
Sbjct: 338 LFAQPPEFLSGQD------IEIEYVSPLAKAQKSTELSSIMRAIEI---MGSLSNVAPVF 388
Query: 475 DHMDTDRVSRFSLWATNTPAVLIRDTAEV 503
DH++ D++ R P +++ +E+
Sbjct: 389 DHINMDKLVRHLTNIVGVPQKILKPQSEL 417
>gi|291336934|gb|ADD96462.1| hypothetical protein ALOHA_HF400048F7ctg1g11 [uncultured organism
MedDCM-OCT-S09-C787]
Length = 450
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 213/446 (47%), Gaps = 35/446 (7%)
Query: 45 MWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVT 104
++D + ++ L++ L ++T P W L F + + +EW + T
Sbjct: 22 IFDGSPLQSVELLAASLHGMLTNPSTPWFSLR--------FKQNDMENEDEAKEWLEDAT 73
Query: 105 DTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYM 164
+ ++ ++S F + Y ++ FGT ++E D DE L+ R+I+ +++
Sbjct: 74 EVMYS--AFNKSNFQQEIFELYHDLITFGTAAMFIEED-DEDILKFSTRHIN----EIFI 126
Query: 165 SVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTD 224
+ N + +D+V+R+F+ + ++ K+GD +S + + ++ E I+HAVYP+S D
Sbjct: 127 AENDKGRIDTVFRKFSLSARAVMQKFGD--VSINIATKAKKDPYEEVEIMHAVYPRSDFD 184
Query: 225 -KKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIR 283
+K+DK N F S ++ + FP++V RY + EIYGRSPAM ALP ++
Sbjct: 185 PRKQDKENMPFESVYLDAESGDELSVSGFREFPFVVPRYLKASHEIYGRSPAMTALPDVK 244
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP 343
LNE + + + PP + + PG +N R + P
Sbjct: 245 MLNEMSKTTIKSAQKQVDPPLLVPDDGFMLPVRTIPGGLNFYRAGTRDRIETLNIGANTP 304
Query: 344 LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFI 403
L + E R + SIR+ F ++ ++ +A E +++ EK +GP++G LQSE +
Sbjct: 305 LGLNMEEQR-RNSIRNAFYVNQL-MMQSGPQMTATEVIQRNEEKMRLLGPVLGRLQSELL 362
Query: 404 GAMISRELDILDSQGNL----PE-CEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGV 458
+I R ++ + NL PE G D +++EY SPL K Q++ ++S ++ +
Sbjct: 363 KPLIDRTFALI-LRKNLFRPAPEFLAGQD------IEIEYVSPLAKAQKSTELSSIMRAI 415
Query: 459 NTVVELGVKTGDPSCMDHMDTDRVSR 484
LG + DH++ D++ R
Sbjct: 416 EI---LGSLSNVAPVFDHINMDKLVR 438
>gi|288959388|ref|YP_003449729.1| phage head-tail connector protein [Azospirillum sp. B510]
gi|288911696|dbj|BAI73185.1| phage head-tail connector protein [Azospirillum sp. B510]
Length = 535
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 208/475 (43%), Gaps = 37/475 (7%)
Query: 44 RMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQV 103
R++D T A L++ L +IT P W + E + V+ W V
Sbjct: 55 RLFDATAGMANNNLAAGLYGMITNPANSWFNIKHEID--------ELNEVQAVKLWMATV 106
Query: 104 TDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVY 163
+ + F + Y + FGT FY++ ++ G G+ Y LS +
Sbjct: 107 ERAMRQALAANGLAFYSRVFGLYLDLPAFGTAVFYID---EQPG--RGLWYSHRRLSECF 161
Query: 164 MSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENER-FTIIHAVYPKSL 222
+S N + +D+VYR+FT+T Q +WGD+ ++ A+ + E +R F +HAV P
Sbjct: 162 VSENDREEIDTVYRDFTWTARQAQQRWGDRA-GREVAKAIEKGEPDRPFRWLHAVEPNPD 220
Query: 223 TDKKKDKGN-KGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPT 281
D +K K F S +V VD+ E PY V R+ YG S A+ A+
Sbjct: 221 FDPRKLGARFKPFRSVYVGVDDRHVVAEGGYDELPYQVPRWAPSDAGTYGDSAAVLAIAD 280
Query: 282 IRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG 341
I+ +N + ++ PP +A E R PG + G + G L +P+Q G
Sbjct: 281 IKMVNAMGKTTIVGAQKAVDPPLLAPDEFSVRGLRTSPGGITYGGVDMGGNQLLKPLQTG 340
Query: 342 NPLPYHEELNRLKE-SIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQS 400
+ EL + +IR F L ++ + R+A E ME EK + P +G +Q+
Sbjct: 341 ARVDLGLELEEQRRGAIREAFHWSLL-LMVQQPGRTATEVMEHQEEKLRLMAPHLGRIQA 399
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSL-----LKVEYTSPL---FKYQQAESVA 452
EF+ + R +L+ G LP PP L L+++Y SPL K + +V
Sbjct: 400 EFLDPALGRVFSLLNRTGQLPP------PPDVLRQYPGLRLDYVSPLARAAKAAEGAAVI 453
Query: 453 SALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIR 507
L+ + + +L P MD+ DTD ++R A PA ++ D +VE +R
Sbjct: 454 RTLEALGPIAQL-----RPEVMDNFDTDEIARGISDAYGLPAKMMLDPRQVEQMR 503
>gi|317152045|ref|YP_004120093.1| Bacteriophage head-to-tail connecting protein [Desulfovibrio
aespoeensis Aspo-2]
gi|316942296|gb|ADU61347.1| Bacteriophage head-to-tail connecting protein [Desulfovibrio
aespoeensis Aspo-2]
Length = 603
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 143/529 (27%), Positives = 220/529 (41%), Gaps = 53/529 (10%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN-------------AQLRMWDTTGSE 52
A+ +Q RF L+ R EL+ ++ P KN+ R++D+T S
Sbjct: 7 ARSLQTRFKGLEEARQPWLAAWRELSDYMLPRKNSFTGIDPGSTRGRSGDERIFDSTPSH 66
Query: 53 ACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRE 112
A L+S L L+T P W + + VR + Q + +
Sbjct: 67 ALELLASSLGGLLTNPAMPWFDIRAR--------DPDQGDGAGVRTFLQQARERMIALFN 118
Query: 113 RSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV 172
+GF + Y V GT Y+EAD D +R+ + PL VY + + + V
Sbjct: 119 TEDTGFQTNVHELYLDVALLGTAVMYVEADPDTV-----VRFCTRPLGEVYAAESARGAV 173
Query: 173 DSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKK-DKGN 231
DSVYR +T + Q +WG S + + ++ I+HAV+P++ D +
Sbjct: 174 DSVYRRYTLSARQTAREWG-AACSGETRRKAEERPDDTVEILHAVFPRTDRDPYGVGAAH 232
Query: 232 KGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNE 291
F S +V EE PY+V R+ A E YGR P AL R LN
Sbjct: 233 FPFASVYVETGAEHVLEESGYLEMPYLVPRWAKAAGETYGRGPGQTALSDTRVLNAMART 292
Query: 292 LAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALS--REGRSLFQPVQFGNPLPYHEE 349
PP + + L P + G LS R G P + PLP + +
Sbjct: 293 ALMAAEKMSDPPLMVPDDGF-----LGPVHSGPGGLSYYRAG----SPDRI-EPLPVNVD 342
Query: 350 L-------NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEF 402
L + +ESIR +FL D Q+ + + +A E++ + EK +GP++G LQ+EF
Sbjct: 343 LAATETMMQQRRESIRRIFLGD--QLTPEGPAVTATEALIRQSEKMRVLGPVLGRLQAEF 400
Query: 403 IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVV 462
+ +I R I+ G LP P ++V YTSP+ + Q+ E A L +
Sbjct: 401 LSPLIRRVFRIMLRAGALPPFPQGFGP--DDIEVRYTSPVARAQK-EFEARGLSRTMEYL 457
Query: 463 ELGVKTGDP-SCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQR 510
V DP MD+ DTDR +R TP+ +R +V + R +
Sbjct: 458 APLVGASDPFGIMDNFDTDRAARHVAELFGTPSDYLRPEKDVAETRAAK 506
>gi|167041083|gb|ABZ05844.1| hypothetical protein ALOHA_HF400048F7ctg1g11 [uncultured marine
microorganism HF4000_48F7]
Length = 552
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 125/512 (24%), Positives = 232/512 (45%), Gaps = 53/512 (10%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN-----------AQLRMWDTT 49
M+ +A +Q+ + LK++RG +++ + P + + + R++++T
Sbjct: 1 MSSDAATLVQE-YEALKSERGNWENMWQDIAELMIPRRADFTNRYRAPGEQRRDRIYEST 59
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
A ++ +S L + +T W L +E ++++V+ W + T
Sbjct: 60 AVRALVRGASGLHNTLTSSTVPWFALETE--------DRELMKNRQVQLWLEDATRRCNS 111
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
RS F +Y ++ FGTGC Y+ E G+ G + S L + Y++
Sbjct: 112 VFNAPRSMFHQSAHEYYLDLLAFGTGCMYV---TQEPGM--GPVFKSYFLGHTYIAEGKT 166
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDK 229
++DSVYR F T + ++G+K+ +K+A + RF ++H V P+S +
Sbjct: 167 GMIDSVYRRFDDTARSLYKQFGNKLPDEIVKAA-DKEPFRRFELLHIVRPRSNAPGGRTS 225
Query: 230 GNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETV 289
K F S +V + + +E PYIV R++ + E+YGR P +EALP +R V
Sbjct: 226 KQKPFLSVYVHAESRKVVQEGGFDEMPYIVSRWQKNSMEVYGRGPGIEALPDVR----MV 281
Query: 290 NELAQFGRLSLH----PPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLP 345
NE+ + G ++L PP + + PG +N + P+Q G +
Sbjct: 282 NEMERVGLIALQKVVDPPLLVPDDGFLSPIRTTPGGLNYYRAGLGPQDRIAPLQTGGRVD 341
Query: 346 YHE-ELNRLKESIRSLFLLDLFQVLDDKASR------SAAESMEKTREKGAFVGPLIGGL 398
+E ++ +++ +I F LDL ++ A+ SA E + R++ +GP++
Sbjct: 342 LNEAKIGQVRAAIERTFYLDLLELPGPTAADGDVLRFSATEIAARQRDRLNILGPIVARQ 401
Query: 399 QSEFIGAMISRELDILDSQGNLPECEGADNPPVSLL----KVEYTSPLFKYQQAESVASA 454
++EF+G ++ R L ++ LP PP LL KV Y++P+ Q+A +AS
Sbjct: 402 EAEFLGPLVIRTLSVMLRAEMLPP------PPQVLLDADFKVSYSNPVAIAQRAGELASI 455
Query: 455 LQGVNTVVELGVKTGDPSCMDHMDTDRVSRFS 486
Q + +V DP+ + T RV+ +
Sbjct: 456 SQLIQFLVPFA--QLDPTVIQRFQTGRVAELA 485
>gi|218886173|ref|YP_002435494.1| hypothetical protein DvMF_1072 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757127|gb|ACL08026.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 595
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 212/486 (43%), Gaps = 51/486 (10%)
Query: 44 RMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQV 103
R+ D T + A L++ + +T P + W L + A DA S R W D V
Sbjct: 74 RVIDATATRAVRILAAGMQGGLTSPARPWFRLRLADGA--------DAESGPARRWLDAV 125
Query: 104 TDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVY 163
L+ +RS F + YT + FG+ Y E D E R+ ++
Sbjct: 126 EQRLYW--ALARSNFYQASHALYTELAAFGSADLYQEVDP-----ERLTRFAALTCGEFS 178
Query: 164 MSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLT 223
+ + VD+V R T Q+ ++G+ LS+ + L + N ++H V P+++
Sbjct: 179 WACDAAGRVDTVARRMLMTARQLAERYGEAHLSTGTRRMLRKEPNRHVEVVHLVRPRAV- 237
Query: 224 DKKKDKGNKGFHSKFVSV------DENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAME 277
+ G H F S+ E FP++ R+ V ++YGRSP M+
Sbjct: 238 --RTPGHGSGLHMPFESLVFEADGAAGDLLHEGGFEEFPHLAARWDVTGSDVYGRSPGMD 295
Query: 278 ALPTIRRLNETVNELAQFGRLSLH----PPTIAVSEAKQRNFDLKPGYMNIGALSREGRS 333
LP ++ L E+A+ L++H PP + KQR +L PG N A +
Sbjct: 296 VLPDVKML----QEMARSQLLAIHKVVNPPMRVPTGFKQR-LNLIPGAQNYVAPGQP--E 348
Query: 334 LFQPVQFGNP--LPYHEELNRLKESIRSLFLLDLFQVL--DDKASRSAAESMEKTREKGA 389
P+ NP +++ +++++R F DLF + D +++ +AAE E+ +EK
Sbjct: 349 AVAPLYQINPDIAAVTRKIDDVRKAVREGFFNDLFLMFTADGRSNVTAAEVAERGQEKLL 408
Query: 390 FVGPLIGGLQSEFIGAMISRELDILDSQG----NLPECEGADNPPVSLLKVEYTSPLFKY 445
+GP+I Q+E + +++R IL G N PE EG + ++VEY S L +
Sbjct: 409 MLGPVIERHQTELLDPLLTRTYGILRRAGALPPNPPELEGLE------MRVEYVSALAQA 462
Query: 446 QQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVED 505
Q+ + S Q V L P +D +D D+ PA ++R AEV
Sbjct: 463 QRLGAAQSIRQFAAEVTALSATA--PGVLDKIDFDQAVDELASIGGVPARVVRSDAEVLR 520
Query: 506 IRQQRE 511
+R +RE
Sbjct: 521 LRAERE 526
>gi|298485985|ref|ZP_07004059.1| hypothetical protein PSA3335_1414 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298159462|gb|EFI00509.1| hypothetical protein PSA3335_1414 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 533
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 142/509 (27%), Positives = 219/509 (43%), Gaps = 42/509 (8%)
Query: 10 QDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLRMWDTTGSEACIKLSSLLSSLITPPG 69
+D F++ RG + +E++T + + RM D T ++A LSS + S +TP
Sbjct: 26 RDCFDHSYPIRGS-GFCIEQITAMEAQMR---KARMIDGTTTDAARILSSGIMSGLTPAN 81
Query: 70 QKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSV 129
W G+ S + R W D D L+ + S F T V
Sbjct: 82 SLWFGM------------DVGQESDEERRWLDGSADILW--QNIHASNFDAAAFEGLTDV 127
Query: 130 VEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQN-VVDSVYREFTFTVDQIVS 188
V G Y++ D+ EKG G + P+++VY S + +D+VYR + T +Q V+
Sbjct: 128 VCAGWFALYIDQDM-EKG---GFTFDLWPIASVYCSASKAGGKIDTVYRTYKLTAEQAVN 183
Query: 189 KWGDKVLSSKMKSALARNENERFTIIHAVYPKS--LTDKKKDKGNKGFHSKFVSVDENRF 246
++G+ LS + E IHA+YP++ + + K N S V V
Sbjct: 184 EFGEDNLSETTRKLAKEKPQELVEFIHAIYPRTTHMVGARLAK-NMPVASCKVEVAAKTL 242
Query: 247 FEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIA 306
E P +V R+ + D +Y P +ALP R LNE G L++ IA
Sbjct: 243 VSESGYHEMPVVVPRWMMIPDSVYAVGPVFDALPDSRTLNELCRMDLAAGDLAIAGMWIA 302
Query: 307 VSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHE-ELNRLKESIRSLFLLDL 365
+ +K G I + +P+Q G+ Y E ++ RL+ SIR + + D
Sbjct: 303 EDDGVLNPRTVKVGPRKI--IVANSVDSMKPLQSGSNFQYAETKIARLQGSIRKILMADQ 360
Query: 366 FQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEG 425
Q D A +A E + +GP+ G LQ+E++ MI R I G L +
Sbjct: 361 LQAQDGPA-MTATEVHVRVNLIRQLLGPVYGRLQTEYLQPMIERCFGIAYRAGVLGQA-- 417
Query: 426 ADNPPVSL----LKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDR 481
P SL V Y SPL + Q+ E V++ Q V L V DPS MD++D D
Sbjct: 418 ----PESLAGRDFTVRYLSPLARSQKLEEVSAIDQFVQGA--LIVAQADPSVMDNIDMDE 471
Query: 482 VSRFSLWATNTPAVLIRDTAEVEDIRQQR 510
RF A P+ +IR A+ + +R+ R
Sbjct: 472 AQRFKGEALGVPSSVIRSKADRDKLREDR 500
>gi|302339294|ref|YP_003804500.1| head-to-tail joining protein [Spirochaeta smaragdinae DSM 11293]
gi|301636479|gb|ADK81906.1| head-to-tail joining protein, putative [Spirochaeta smaragdinae DSM
11293]
Length = 560
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 131/526 (24%), Positives = 237/526 (45%), Gaps = 44/526 (8%)
Query: 3 QRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----NNAQLR-----MWDTTGSE 52
++SA++I F LK +R +E+T ++P + N + ++D T
Sbjct: 4 EKSAQEIIQTFEQLKQERSTWEDEYQEITEQIFPRRSVWTDNKGRASRSGGLIYDGTPIS 63
Query: 53 ACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRE 112
A L++ L + P +W L + E + + R+W + V + ++ E
Sbjct: 64 ALNLLANGLVGYLVSPATRWFKLRPT--------QDELLQIRGARQWLEIVENLIYD--E 113
Query: 113 RSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV 172
+RS F + ++ G Y++ D+ + R+ +Y++ + +
Sbjct: 114 FNRSNFYEEIVEYFRDGGSIGIATIYVQEDIGRRMANYSCRH----PKEIYIAEDRFGYI 169
Query: 173 DSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNK 232
D+V+R F T ++ ++G + LS +++ R+ ER IIHAVYP+ + +K KGN+
Sbjct: 170 DTVFRRFFPTAKELEEEFGREALSDGVQNLCERSPYERVEIIHAVYPRKKRNPRK-KGNR 228
Query: 233 G--FHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVN 290
F S +V N E+ PY+V R+ +DE+YGR P +AL ++RLN
Sbjct: 229 DMKFASAYVEGGSNHKIRERGYERLPYVVWRWSTNSDEVYGRGPGYDALVDVKRLNRLSR 288
Query: 291 ELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEEL 350
++ + ++++ PP +AV E + + P +N E PV + + L
Sbjct: 289 DMLKQSQMAVDPP-LAVPEKMRGKVNWVPRGLNYYQNPNE-----VPVALNPGMQFQVGL 342
Query: 351 NR---LKESIRSLFLLDLFQVLDDKASR-SAAESMEKTREKGAFVGPLIGGLQSEFIGAM 406
+R +++ I F+ D F +L+ +A E ME+ EK A +G +IG + SEF+ +
Sbjct: 343 DREQHMQQIIEKHFMTDFFLMLEQAPKEMTATEVMERQSEKAAVLGTVIGRISSEFLDPI 402
Query: 407 ISRELDILDSQGNL----PECEGADNPPVSLLKVEYTSPLFKYQQAESVA-SALQGVNTV 461
I DI L PE A ++++Y PL + Q+ V A Q +N V
Sbjct: 403 IDITFDIAMKGKRLPPPPPEFAEAMYKTNGGIEIDYLGPLAQAQKKFHVTQGAQQSLNAV 462
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIR 507
+ +P D ++ D+++ L A P I D +V+ IR
Sbjct: 463 AP--IMQINPQVADLINWDQLTMEILHAYGMPQKAIVDLRDVQKIR 506
>gi|327252184|gb|EGE63856.1| bbp21 [Escherichia coli STEC_7v]
Length = 559
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 128/523 (24%), Positives = 236/523 (45%), Gaps = 51/523 (9%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D D+ IR + P+ + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAMAVLEDDDDI-----IRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFT-IIHAVYPKSLTDKKK- 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSR-EGRSLFQPVQFGNP 343
L +Q + +PP IA + K + L PG +I + + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMIAPTSLKNQRASLLPG--DITYIDQITGQDGFRPAYLVNP 343
Query: 344 LPYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQ 399
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 344 STADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLN 403
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASAL 455
E + +I R ++ + LP PP ++ LKVEY S + + Q++ ++S
Sbjct: 404 DECLNPLIDRAFSMMVRKNMLPP------PPDAMEGMPLKVEYISVMAQAQKSIGLSSLA 457
Query: 456 QGVNTVVELGVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLI 497
VN + +L P +D ++ D+ + F+ + +P V++
Sbjct: 458 STVNFIGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIV 498
>gi|324008560|gb|EGB77779.1| hypothetical protein HMPREF9532_01747 [Escherichia coli MS 57-2]
Length = 559
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/523 (24%), Positives = 236/523 (45%), Gaps = 51/523 (9%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFT-IIHAVYPKSLTDKKK- 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSR-EGRSLFQPVQFGNP 343
L +Q + +PP +A + K + L PG +I + + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPG--DITYIDQITGQDGFRPAYLVNP 343
Query: 344 LPYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQ 399
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 344 STADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLN 403
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASAL 455
E + +I R ++ + LP PP ++ LKVEY S + + Q++ ++S
Sbjct: 404 DECLNPLIDRSFSMMVRKNMLPP------PPDAMEGMPLKVEYISVMAQAQKSIGLSSLA 457
Query: 456 QGVNTVVELGVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLI 497
VN + +L P +D ++ D+ + F+ + +P V++
Sbjct: 458 STVNFIGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIV 498
>gi|301046408|ref|ZP_07193568.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|300301634|gb|EFJ58019.1| conserved hypothetical protein [Escherichia coli MS 185-1]
Length = 559
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/523 (24%), Positives = 236/523 (45%), Gaps = 51/523 (9%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEANRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFT-IIHAVYPKSLTDKKK- 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSR-EGRSLFQPVQFGNP 343
L +Q + +PP +A + K + L PG +I + + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPG--DITYIDQITGQDGFRPAYLVNP 343
Query: 344 LPYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQ 399
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 344 STADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLN 403
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASAL 455
E + +I R ++ + LP PP ++ LKVEY S + + Q++ ++S
Sbjct: 404 DECLNPLIDRAFSMMVRKNMLPP------PPDAMEGMPLKVEYISVMAQAQKSIGLSSLA 457
Query: 456 QGVNTVVELGVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLI 497
VN + +L P +D ++ D+ + F+ + +P V++
Sbjct: 458 STVNFIGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIV 498
>gi|117624712|ref|YP_853625.1| putative tail protein [Escherichia coli APEC O1]
gi|115513836|gb|ABJ01911.1| putative tail protein [Escherichia coli APEC O1]
Length = 559
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/523 (24%), Positives = 238/523 (45%), Gaps = 51/523 (9%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFT-IIHAVYPKSLTDKKK- 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMN-IGALSREGRSLFQPVQFGNP 343
L +Q +PP +A + + ++ L PG + + L+ G+ +PV NP
Sbjct: 286 LQLLQKRKSQIIDKVTNPPMVAPTTLRTQSVSLLPGGVTYVDQLT--GQEGLRPVYQVNP 343
Query: 344 --LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQ 399
++ +++I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 344 NTADLISDIQDTRQTINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLN 403
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASAL 455
E + +I R ++ + LP PP ++ LKVEY S + + Q++ ++S
Sbjct: 404 DECLNPLIDRAFSMMVRKNMLPP------PPDAMEGMPLKVEYISVMAQAQKSIGLSSLA 457
Query: 456 QGVNTVVELGVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLI 497
VN + +L G P +D ++ D+ + F+ + +P V++
Sbjct: 458 STVNFIGQLA--QGKPEALDKLNVDQAIDAFADMSGVSPTVIV 498
>gi|323156133|gb|EFZ42292.1| bbp21 [Escherichia coli EPECa14]
Length = 559
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/523 (24%), Positives = 236/523 (45%), Gaps = 51/523 (9%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFT-IIHAVYPKSLTDKKK- 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIDVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMN-IGALSREGRSLFQPVQFGNP 343
L +Q + +PP +A + K + L PG + I ++ G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITYIDQIT--GQDGFRPAYLVNP 343
Query: 344 LPYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQ 399
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 344 STADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLN 403
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASAL 455
E + +I R ++ + LP PP ++ LKVEY S + + Q++ ++S
Sbjct: 404 DECLNPLIDRAFSMMVRKNMLPP------PPDAMEGMPLKVEYISVMAQAQKSIGLSSLA 457
Query: 456 QGVNTVVELGVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLI 497
VN + +L P +D ++ D+ + F+ + +P V++
Sbjct: 458 STVNFIGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIV 498
>gi|301019343|ref|ZP_07183529.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|299882260|gb|EFI90471.1| conserved hypothetical protein [Escherichia coli MS 196-1]
Length = 559
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/523 (24%), Positives = 236/523 (45%), Gaps = 51/523 (9%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEANRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFT-IIHAVYPKSLTDKKK- 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSR-EGRSLFQPVQFGNP 343
L +Q + +PP +A + K + L PG +I + + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPG--DITYIDQITGQDGFRPAYLVNP 343
Query: 344 LPYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQ 399
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 344 STADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLN 403
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASAL 455
E + +I R ++ + LP PP ++ LKVEY S + + Q++ ++S
Sbjct: 404 DECLNPLIDRAFSMMVRKNMLPP------PPDAMEGIPLKVEYISVMAQAQKSIGLSSLA 457
Query: 456 QGVNTVVELGVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLI 497
VN + +L P +D ++ D+ + F+ + +P V++
Sbjct: 458 STVNFIGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIV 498
>gi|331648176|ref|ZP_08349266.1| conserved hypothetical protein [Escherichia coli M605]
gi|331043036|gb|EGI15176.1| conserved hypothetical protein [Escherichia coli M605]
Length = 559
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/523 (24%), Positives = 236/523 (45%), Gaps = 51/523 (9%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFT-IIHAVYPKSLTDKKK- 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSR-EGRSLFQPVQFGNP 343
L +Q + +PP +A + K + L PG +I + + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPG--DITYIDQITGQDGFRPAYLVNP 343
Query: 344 LPYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQ 399
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 344 STADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLN 403
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASAL 455
E + +I R ++ + LP PP ++ LKVEY S + + Q++ ++S
Sbjct: 404 DECLNPLIDRAFSMMVRKNMLPP------PPDAMEGMPLKVEYISVMAQAQKSIGLSSLA 457
Query: 456 QGVNTVVELGVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLI 497
VN + +L P +D ++ D+ + F+ + +P V++
Sbjct: 458 STVNFIGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIV 498
>gi|320175046|gb|EFW50159.1| putative tail protein [Shigella dysenteriae CDC 74-1112]
Length = 559
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 129/524 (24%), Positives = 236/524 (45%), Gaps = 53/524 (10%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 -FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNH 168
F E S L Y S+ + TG + D E+ IR + P+ + Y++ +
Sbjct: 113 MFNE---SNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSP 164
Query: 169 QNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFT-IIHAVYPKSLTDKKK 227
+ VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 165 RGSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSK 224
Query: 228 -DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIR 283
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 225 LDSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVK 284
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMN-IGALSREGRSLFQPVQFGN 342
L +Q + +PP +A + K + L PG + I ++ G+ F+P N
Sbjct: 285 ALQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITYIDQIT--GQDGFRPAYLVN 342
Query: 343 PLPYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGL 398
P ++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 343 PSTADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERL 402
Query: 399 QSEFIGAMISRELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASA 454
E + +I R ++ + LP PP ++ LKVEY S + + Q++ ++S
Sbjct: 403 NDECLNPLIDRAFSMMVRKNMLPP------PPDAMEGMPLKVEYISVMAQAQKSIGLSSL 456
Query: 455 LQGVNTVVELGVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLI 497
VN + +L P +D ++ D+ + F+ + +P V++
Sbjct: 457 ASTVNFIGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIV 498
>gi|323699782|ref|ZP_08111694.1| phage head-tail connector protein [Desulfovibrio sp. ND132]
gi|323459714|gb|EGB15579.1| phage head-tail connector protein [Desulfovibrio desulfuricans
ND132]
Length = 579
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 144/560 (25%), Positives = 238/560 (42%), Gaps = 53/560 (9%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN--------------AQLRMWDTTGS 51
A+ + RF+ L+ R +ELT ++ P KN+ R++D+T
Sbjct: 7 ARSLLKRFSGLEEARRPWVSSWQELTEYMLPRKNSFAGPGGHTLGRGRAGDERIFDSTPL 66
Query: 52 EACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFR 111
A L+S L L+T P W ++ A K DA +VR + + + +
Sbjct: 67 HALELLASSLGGLLTNPSLPWFDISVKDRA------KGDA--DEVRAFMQEARERMVAVF 118
Query: 112 ERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNV 171
+GF + Y V GT Y+EAD +R+ + PL V+++ + +
Sbjct: 119 NSEDTGFQAHVHELYLDVALLGTAVMYVEADPTSV-----VRFSARPLGEVFVAESARGQ 173
Query: 172 VDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKK-DKG 230
VD+VYR + T Q + +WG + R E E ++HAV+P+ D
Sbjct: 174 VDTVYRRYEVTARQAIQEWGAACSDETRRKGEDRPE-EPVEVLHAVFPRMDRDPAGFGSA 232
Query: 231 NKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVN 290
+ F S ++ V + EE PY+V R+ A E YGR P AL +R LN
Sbjct: 233 HFPFASVYMEVKNSHVLEESGYLEMPYMVPRWAKAAGETYGRGPGQTALSDVRVLNAMAR 292
Query: 291 ELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEEL 350
PP + + PG ++ R PV + E +
Sbjct: 293 TALMAAEKMSDPPLMVPDDGFLGPVRSGPGGLSYYRAGSTDRIEALPVNV-DLRAAEEMM 351
Query: 351 NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRE 410
N +ESI +FL D Q+ + + +A E++ + EK +GP++G LQ+EF+ +I R
Sbjct: 352 NGRRESIGRIFLSD--QLAPEGPAVTATEAVIRQAEKMRVLGPVLGRLQTEFLSPLIRRV 409
Query: 411 LDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQ---QAESVASALQGVNTVVELGVK 467
++ G LP +P L+V YTS + + Q +A+ +A ++ ++ +V
Sbjct: 410 FRVMLRGGALPPFPEGLSP--DDLEVRYTSSVTRAQKQYEAQGLAQVMEYLSPLVGGRDA 467
Query: 468 TGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQ 527
G MD+ DTDRV+R N P+ D + ED RV+E + +Q++
Sbjct: 468 FG---IMDNFDTDRVARHVAELFNIPS----DYLKSED---------RVVEGRTQKQRVA 511
Query: 528 QTSQDIGAKAAGRAMEKKLT 547
+ Q A A+ K L+
Sbjct: 512 SSQQTASTVANAAAIAKTLS 531
>gi|294492610|gb|ADE91366.1| conserved hypothetical protein [Escherichia coli IHE3034]
gi|323948685|gb|EGB44590.1| hypothetical protein ERKG_04908 [Escherichia coli H252]
Length = 559
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 127/524 (24%), Positives = 235/524 (44%), Gaps = 53/524 (10%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFT-IIHAVYPKSLTDKKK- 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSR-EGRSLFQPVQFGNP 343
L +Q + +PP +A + K + L PG +I + + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPG--DITYIDQITGQDGFRPAYLVNP 343
Query: 344 LPYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQ 399
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 344 STADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLN 403
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSL-----LKVEYTSPLFKYQQAESVASA 454
E + +I R ++ + LP PP + LKVEY S + + Q++ ++S
Sbjct: 404 DECLNPLIDRSFSMMVRKNMLP-------PPPDVMEGMPLKVEYISVMAQAQKSIGLSSL 456
Query: 455 LQGVNTVVELGVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLI 497
VN + +L P +D ++ D+ + F+ + +P V++
Sbjct: 457 ASTVNFIGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIV 498
>gi|218700990|ref|YP_002408619.1| putative head-to-tail-joining protein [Escherichia coli IAI39]
gi|218370976|emb|CAR18803.1| putative head-to-tail-joining protein [Escherichia coli IAI39]
Length = 559
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 127/523 (24%), Positives = 235/523 (44%), Gaps = 51/523 (9%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+ S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NNSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFT-IIHAVYPKSLTDKKK- 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMN-IGALSREGRSLFQPVQFGNP 343
L +Q + +PP +A + K + L PG + I ++ G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITYIDQIT--GQDGFRPAYLVNP 343
Query: 344 LPYH--EELNRLKESIRSLFLLDLFQVLDDKASRS--AAESMEKTREKGAFVGPLIGGLQ 399
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 344 STADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLN 403
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASAL 455
E + +I R ++ + LP PP ++ LKVEY S + + Q++ ++S
Sbjct: 404 DECLNPLIDRAFSMMVRKNMLPP------PPDAMEGMPLKVEYISVMAQAQKSIGLSSLA 457
Query: 456 QGVNTVVELGVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLI 497
VN + +L P +D ++ D+ + F+ + +P V++
Sbjct: 458 STVNFIGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIV 498
>gi|298381718|ref|ZP_06991317.1| hypothetical protein ECFG_01455 [Escherichia coli FVEC1302]
gi|298279160|gb|EFI20674.1| hypothetical protein ECFG_01455 [Escherichia coli FVEC1302]
Length = 559
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 127/523 (24%), Positives = 235/523 (44%), Gaps = 51/523 (9%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+ S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NNSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFT-IIHAVYPKSLTDKKK- 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSR-EGRSLFQPVQFGNP 343
L +Q + +PP +A + K + L PG +I + + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPG--DITYIDQITGQDGFRPAYLVNP 343
Query: 344 LPYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQ 399
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 344 STADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLN 403
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASAL 455
E + +I R ++ + LP PP ++ LKVEY S + + Q++ ++S
Sbjct: 404 DECLNPLIDRAFSMMVRKNMLPP------PPDAMEGMPLKVEYISVMAQAQKSIGLSSLA 457
Query: 456 QGVNTVVELGVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLI 497
VN + +L P +D ++ D+ + F+ + +P V++
Sbjct: 458 STVNFIGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIV 498
>gi|89152428|ref|YP_512261.1| putative head-to-tail-joining protein [Escherichia phage phiV10]
gi|74055451|gb|AAZ95900.1| putative head-to-tail-joining protein [Escherichia phage phiV10]
Length = 559
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 130/525 (24%), Positives = 239/525 (45%), Gaps = 55/525 (10%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG A +D+ E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAM---AVLDDD--EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFT-IIHAVYPKSLTDKKK- 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSR-EGRSLFQPVQFGNP 343
L +Q + +PP +A + K + L PG +I + + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPG--DITYIDQITGQDGFRPAYLVNP 343
Query: 344 LPYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQ 399
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 344 STADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLN 403
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSL-----LKVEYTSPLFKYQQAESVASA 454
E + +I R ++ + LP PP + LKVEY S + + Q++ ++S
Sbjct: 404 DECLNPLIDRSFSMMVRKNMLP-------PPPDVMEGMPLKVEYISVMAQAQKSIGLSSL 456
Query: 455 LQGVNTVVELG-VKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLI 497
VN + +L VK P +D ++ D+ + F+ + +P V++
Sbjct: 457 ASTVNFIGQLAQVK---PEALDKLNVDQAIDAFADMSGVSPTVIV 498
>gi|30387383|ref|NP_848212.1| hypothetical protein epsilon15p04 [Enterobacteria phage epsilon15]
gi|30266038|gb|AAO06067.1| 4 [Salmonella phage epsilon15]
Length = 556
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 136/528 (25%), Positives = 236/528 (44%), Gaps = 66/528 (12%)
Query: 16 LKNQRGEL-NYWMEELTGFLYPY-----------KNNAQLRMWDTTGSEACIKLSSLLSS 63
LKN+R ++W++ L+ F+ P + ++ D TGS A LSS + S
Sbjct: 16 LKNERTSFESHWLD-LSDFINPRGSRFLTSDVNRDDRRNTKIVDPTGSMAQRILSSGMMS 74
Query: 64 LITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQV---TDTLFGFRERSRSGFVG 120
IT P + W LA + V+ W + V + +F ++S
Sbjct: 75 GITSPARPWFKLATPDPDMMDY--------GPVKIWLEVVQRRMNEVF-----NKSNLYQ 121
Query: 121 CLQSFYTSVVEFGTGCF-YMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREF 179
L Y S+ FGTG ME D D IR + P+ + Y++ + + VD+ R+F
Sbjct: 122 SLPVMYASLGTFGTGAMAVMEDDQDV------IRTMPFPIGSYYLANSPRGSVDTCIRQF 175
Query: 180 TFTVDQIVSKWGDKVLSSKMKSALARNENERFT-IIHAVYPKSLTDK-KKDKGNKGFHSK 237
+ TV Q+V ++G +S+ +K E + + H + P D K D NK + S
Sbjct: 176 SMTVRQMVQEFGLDNVSTSVKGMWENGTYETWVEVNHCITPNVNRDSGKMDSKNKPYRSV 235
Query: 238 FVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRRLNETVNELAQ 294
+ D ++ E FP + R+ V +++Y S P M AL ++ L AQ
Sbjct: 236 YFESGGDSDKLLRESGFDEFPILAPRWEVNGEDVYASSCPGMLALGQVKALQVEQKRKAQ 295
Query: 295 FGRLSLHPPTIAVSEAKQRNFDLKPG---YMNIGALSREGRSLFQPVQFGNP--LPYHEE 349
+ +PP +A + K + L PG Y+++ + G+ F+P NP +
Sbjct: 296 LIDKATNPPMVAPTSLKNQRVSLLPGDVTYLDVIS----GQDGFKPAYLVNPNTADLLAD 351
Query: 350 LNRLKESIRSLFLLDLFQVLDDKASRS--AAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
+ +++I S + +DLF +L + +RS +E EK +GP++ L E + +I
Sbjct: 352 IQDTRQTINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLNDEALNPLI 411
Query: 408 SRELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASALQGVNTVVE 463
R I+ + LPE PP L L++EY S + + Q++ + S Q V + +
Sbjct: 412 DRVFSIMARKNMLPE------PPDVLQGMPLRIEYISVMAQAQKSIGLTSLSQTVGFIGQ 465
Query: 464 LGVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLIRDTAEVEDIRQQR 510
L P +D +D D+ + FS + +P V++ +V+ IR++R
Sbjct: 466 LA--QFKPEALDKLDVDQAIDAFSEMSGVSPTVIV-PQEQVQGIREER 510
>gi|300898427|ref|ZP_07116768.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300357894|gb|EFJ73764.1| conserved hypothetical protein [Escherichia coli MS 198-1]
Length = 559
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 126/524 (24%), Positives = 234/524 (44%), Gaps = 53/524 (10%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFT-IIHAVYPKSLTDKKK- 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEFGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSR-EGRSLFQPVQFGNP 343
L +Q + +PP +A + K + L PG +I + + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPG--DITYIDQITGQDGFRPAYLVNP 343
Query: 344 LPYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQ 399
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 344 STADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLN 403
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSL-----LKVEYTSPLFKYQQAESVASA 454
E + +I R ++ + LP PP + LKVEY S + + Q++ ++S
Sbjct: 404 DECLNPLIDRAFSMMVRKNMLP-------PPPDVMEGMPLKVEYISVMAQAQKSIGLSSL 456
Query: 455 LQGVNTVVELGVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLI 497
VN + +L P +D ++ D+ + F+ + +P V++
Sbjct: 457 ASTVNFIGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIV 498
>gi|78357592|ref|YP_389041.1| hypothetical protein Dde_2550 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219997|gb|ABB39346.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 549
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 137/535 (25%), Positives = 235/535 (43%), Gaps = 72/535 (13%)
Query: 15 YLKNQRGELNY-WMEE---LTGFLY-----------PYKNNAQLRMWDTTGSEACIKLSS 59
Y+++QRGE + W E +TG Y P Q R+ D T + A L++
Sbjct: 15 YIESQRGEWDSRWREVADYVTGAGYGGGSWQEGTARPEGRRGQ-RIIDATATRALRVLAA 73
Query: 60 LLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFV 119
L +TPP + W L + S +VR W D V L+ + S F
Sbjct: 74 GLQGGLTPPARPWFRLRLADRGLM--------ESAEVRRWLDDVEAALYA--ALAGSNFY 123
Query: 120 GCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREF 179
+ +T++ +G+ YMEAD + +R+ VP + + + VD+V R F
Sbjct: 124 QNSHALFTALAAYGSADMYMEADP-----QRVMRFCVVPHGDFAWACDAAGRVDTVVRRF 178
Query: 180 TFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKK-KDKGNKGFHS-K 237
+ T Q K+G LS ++ A ++ V P++ D + +D NK + S
Sbjct: 179 SMTAAQAAQKYGSDRLSRTVRRLAAVQPYAPVALVQLVRPRARRDPRRQDSLNKPYESLT 238
Query: 238 FVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGR 297
+ + + R A FP++ R+ V ++YG SP M+ LP ++ L E+A+
Sbjct: 239 WEAQEPRRLLHVSGYAEFPHLCARWEVNGGQLYGHSPVMDVLPDVKML----QEMARSQL 294
Query: 298 LSLH----PPTIAVSEAKQRNFDLKPG---YMNIG---ALSR--EGRSLFQPVQFGNPLP 345
L++H PP + KQR +L PG Y+N ALS + R Q V +
Sbjct: 295 LAVHKVVNPPMRVPTGFKQR-LNLIPGAQNYVNPAQPDALSPLYQIRPDIQAVTY----- 348
Query: 346 YHEELNRLKESIRSLFLLDLFQVL--DDKASRSAAESMEKTREKGAFVGPLIGGLQSEFI 403
++ ++ SIR ++F + + +++ +AAE ME+++EK +GP++ Q++ +
Sbjct: 349 ---KIEDVRRSIREGLFTEMFLLFAGESRSNVTAAEIMERSQEKLLLLGPVVERHQTDIL 405
Query: 404 GAMISRELDILDSQGNLPEC----EGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVN 459
+I R +L G LP G D LKVEY S L + Q+ + Q
Sbjct: 406 DPLIGRAFGLLARAGRLPPAPDVLAGRD------LKVEYVSALAQAQRLSAAQGVRQLAG 459
Query: 460 TVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQR 514
V P +D +D D+ PA ++R +V+ +R++R +++
Sbjct: 460 DVSRFAAMA--PEVLDKIDFDQAVDELASIAGAPAGIVRSDEDVQLLRRERALKQ 512
>gi|332344354|gb|AEE57688.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 559
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 126/523 (24%), Positives = 234/523 (44%), Gaps = 51/523 (9%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + + + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFTIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFT-IIHAVYPKSLTDKKK- 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSR-EGRSLFQPVQFGNP 343
L +Q + +PP +A K + L PG +I + + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPISLKNQRASLLPG--DITYIDQITGQDGFRPAYLVNP 343
Query: 344 LPYH--EELNRLKESIRSLFLLDLFQVLDDKASRS--AAESMEKTREKGAFVGPLIGGLQ 399
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 344 STADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLN 403
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASAL 455
E + +I R ++ + LP PP ++ LKVEY S + + Q++ ++S
Sbjct: 404 DECLNPLIDRAFSMMVRKNMLPP------PPDAMEGMPLKVEYISVMAQAQKSIGLSSLA 457
Query: 456 QGVNTVVELGVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLI 497
VN + +L P +D ++ D+ + F+ + +P V++
Sbjct: 458 STVNFIGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIV 498
>gi|215487822|ref|YP_002330253.1| predicted phage head-tail connector protein [Escherichia coli
O127:H6 str. E2348/69]
gi|215265894|emb|CAS10303.1| predicted phage head-tail connector protein [Escherichia coli
O127:H6 str. E2348/69]
Length = 556
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 134/527 (25%), Positives = 230/527 (43%), Gaps = 64/527 (12%)
Query: 16 LKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTTGSEACIKLSSLLSSL 64
LKN+R +L+ F+ P + ++ D TGS A LSS + S
Sbjct: 16 LKNERTSFESHWRDLSDFINPRGSRFLTSDVNRDDRRNTKIVDPTGSMAQRILSSGMMSG 75
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQV---TDTLFGFRERSRSGFVGC 121
IT P + W LA + V+ W + V + +F ++S
Sbjct: 76 ITSPARPWFKLATPDPDMMDY--------GPVKIWLEVVQRRMNEVF-----NKSNLYQS 122
Query: 122 LQSFYTSVVEFGTGCF-YMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
L Y S+ FGTG +E D D IR + P+ + Y++ + + VD+ R+F+
Sbjct: 123 LPVMYASLGTFGTGAMAVLEDDQDV------IRTMPFPIGSYYLANSPRGSVDTCIRQFS 176
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTII-HAVYPKSLTDK-KKDKGNKGFHSKF 238
TV Q+V ++G +S+ +K E + + H + P D K D NK + S +
Sbjct: 177 MTVRQMVQEFGLDNVSTSVKGMWENGTYETWVKVNHCITPNVNRDSGKMDSKNKPYRSVY 236
Query: 239 VSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRRLNETVNELAQF 295
D ++ E FP + R+ V +++Y S P M AL ++ L AQ
Sbjct: 237 FESGGDSDKLLRESGFDEFPILAPRWEVNGEDVYASSCPGMLALGQVKALQVEQKRKAQL 296
Query: 296 GRLSLHPPTIAVSEAKQRNFDLKPG---YMNIGALSREGRSLFQPVQFGNP--LPYHEEL 350
+ +PP +A + K + L PG Y+++ G+ F+P NP ++
Sbjct: 297 IDKATNPPMVAPTSLKNQRVSLLPGDVTYLDV----LTGQDGFKPAYLVNPNTADLLADI 352
Query: 351 NRLKESIRSLFLLDLFQVLDDKASRS--AAESMEKTREKGAFVGPLIGGLQSEFIGAMIS 408
+++I S + +DLF +L +RS +E EK +GP++ L E + +I
Sbjct: 353 QDTRQTINSAYFVDLFMMLQKINTRSMPVEAVIEMKEEKLLMLGPVLERLNDEALNPLID 412
Query: 409 RELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASALQGVNTVVEL 464
R I+ + LPE PP L L++EY S + + Q++ + S Q V + +L
Sbjct: 413 RVFSIMARKNMLPE------PPDVLQGMPLRIEYISVMAQAQKSIGLTSLSQTVGFIGQL 466
Query: 465 GVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLIRDTAEVEDIRQQR 510
P +D +D D+ + FS + +P V++ +V+ IR++R
Sbjct: 467 A--QFKPEALDKLDVDQAIDAFSEMSGVSPTVIV-PQEQVQGIREER 510
>gi|118590948|ref|ZP_01548348.1| hypothetical protein SIAM614_19846 [Stappia aggregata IAM 12614]
gi|118436470|gb|EAV43111.1| hypothetical protein SIAM614_19846 [Stappia aggregata IAM 12614]
Length = 567
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 213/481 (44%), Gaps = 39/481 (8%)
Query: 44 RMWDTTGSEACIKLSSLLSSLITPPGQKWHGLA--ESFSAYQAFLYKEDARSKKVREWCD 101
+++D T +L+S + SL P G WHG+ + F+ A S+ E+ +
Sbjct: 66 KLYDPTAVWLLDRLASGIGSLTMPEGFPWHGVGFGDPFAP---------APSQADEEFFE 116
Query: 102 QVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGC-FYMEADVDEKGLEEGIRYISVPLS 160
V D LF R RSGF +S S V+ GTG F +E + + + Y VPL
Sbjct: 117 LVRDHLFRVRYSGRSGFALANRSRLLSTVKLGTGVLFPVENEDSLADIRTPVHYRYVPLY 176
Query: 161 NVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMK--SALARNENERFTIIHAVY 218
+Y+ ++ Q +R T Q V ++ KV S K+K +A A+ +N +T +HA +
Sbjct: 177 EIYLVIDAQGNDCGFFRVRTLKAWQAVKEYAGKV-SPKVKEDAADAKRKNTDYTFVHACF 235
Query: 219 PKS-----LTDKKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRS 273
+ TD +K + F S D +P ++ R+ YG
Sbjct: 236 LREGGHAQATDTRKSR----FESIHFEEDSGHICRRGGFFEYPLVISRWDRDGLSPYGSP 291
Query: 274 PAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRS 333
P + + I+ L + ++ PP + A++R DL PG +N G + +GR
Sbjct: 292 PQAKLMSDIKSLQSLARDGLIASSQAVRPPI--ATHAQERQLDLNPGRINPGLIDEQGRP 349
Query: 334 LFQP-VQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVG 392
LF+P + NP ++ ++E +R DL+Q L + R+A E+ + +E +G
Sbjct: 350 LFRPMIDTVNPGAADAQIETIREKLRVGLYGDLWQTLLEGNGRTATEANIRRKEMADMIG 409
Query: 393 PLIGGLQSEFIGAMISRELDILDSQGNL-PECEGADNPPVSLLKVEYT----SPLFKYQQ 447
P + + A+ RE+ IL +G P A PP S+L+ + T +P+ + ++
Sbjct: 410 PFSTNIMAGN-EALFEREIGILGRRGAFAPGSPLA--PPQSVLEGDVTLTPTAPIDQMRE 466
Query: 448 AESVASALQGVNTVVELGVKTG-DPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDI 506
A A+ G LG+ G DPS +D D + + A PA L R EVE +
Sbjct: 467 AGHF-EAIMGFQEY--LGIAAGADPSILDLHDREAEYDLTRRALGLPAKLRRRPEEVEAL 523
Query: 507 R 507
R
Sbjct: 524 R 524
>gi|304398403|ref|ZP_07380277.1| phage head-tail connector protein [Pantoea sp. aB]
gi|304354269|gb|EFM18642.1| phage head-tail connector protein [Pantoea sp. aB]
Length = 553
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 137/527 (25%), Positives = 237/527 (44%), Gaps = 57/527 (10%)
Query: 9 IQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTTGSEACIKL 57
+ + LK++R + +L+ ++ P N + D T + A L
Sbjct: 10 LNKQLGLLKSERTTFDPHWRDLSDYISPRSSRFLVSDANRDNRRNTNIVDPTCTLAERTL 69
Query: 58 SSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQV---TDTLFGFRERS 114
SS + S IT P + W L+ S A + + V+ W + V + +F +
Sbjct: 70 SSGMMSGITSPARPWFTLSVSDPAMKDY--------GPVKVWLEDVQRRMNEVF-----N 116
Query: 115 RSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDS 174
+S L Y + +GT + D E+ IR P+ + Y+S + + VD+
Sbjct: 117 KSNLYQSLPIVYAQLGTYGTAAMAILEDD-----EDIIRTYPFPIGSYYVSNSARLSVDT 171
Query: 175 VYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERF-TIIHAVYPK-SLTDKKKDKGNK 232
VYREF T Q+V ++G +S +K A E + +IHAVYP S K D NK
Sbjct: 172 VYREFRMTTRQLVEQFGLDNVSETVKGQWATQNTESWHDVIHAVYPNVSRQTGKMDAKNK 231
Query: 233 GFHSK-FVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRRLNETVN 290
+ S F +++ E FP + R+ V ++ YG + P M AL ++ L
Sbjct: 232 RYKSVYFEKAGDDKVLRESGFDEFPILAPRWEVNGEDAYGSNCPGMTALGQVKALQLEQK 291
Query: 291 ELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMN-IGALSREGRSLFQPVQFGNPLPYHEE 349
+Q + +PP + S K + PG + + L+ G+ +P+ NP +
Sbjct: 292 RKSQLIDKATNPPMVGPSSLKTQRVSQLPGAVTYVDQLT--GQDGLKPLYMVNP-NTADL 348
Query: 350 LNRLKES---IRSLFLLDLFQVLDDKASRS-AAESMEKTR-EKGAFVGPLIGGLQSEFIG 404
LN ++++ IRS + +DLF +L + +RS E++ + R EK +GP++ L EF+
Sbjct: 349 LNDIQDTRDIIRSAYFVDLFLMLQNINTRSMPVEAVNELREEKLLMLGPVLERLNDEFLD 408
Query: 405 AMISRELDILDSQGNLPECEGADNPPV---SLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+I R I+ +G LP P V + L++EY S + + Q++ V S + V V
Sbjct: 409 PLIDRAFAIMQRKGMLPPA-----PEVLQGTALRIEYISVMAQAQKSIGVNSMERFVGFV 463
Query: 462 VELGVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLIRDTAEVEDIR 507
G+ P +D +D D+ + + +P+V++ D EV+ IR
Sbjct: 464 G--GMAQAKPEALDKLDIDKIIDSYGDSIGVSPSVIVPD-EEVQKIR 507
>gi|187736539|ref|YP_001878651.1| hypothetical protein Amuc_2060 [Akkermansia muciniphila ATCC
BAA-835]
gi|187426591|gb|ACD05870.1| hypothetical protein Amuc_2060 [Akkermansia muciniphila ATCC
BAA-835]
Length = 544
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 137/552 (24%), Positives = 229/552 (41%), Gaps = 80/552 (14%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN-----------AQLRMWDTT 49
M +R+A ++ + L QR W + L ++ P + N A RM DTT
Sbjct: 1 MEERTA-ELNSVYKSLAAQRAPWETWWDRLRDYVLPRRLNREGEVSLPNRDAMDRMTDTT 59
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
EAC KL+S S ITP W +SA +D + W +Q ++
Sbjct: 60 AVEACQKLASGHMSYITPSHDVWF----KWSA------PDDRGGDEAEAWYNQCSE--IA 107
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+E S S F + + V GTG + D + L + ++P + N +
Sbjct: 108 LKELSVSNFYTEIHECFLDRVALGTGSLFTGTSSDGRLL-----FTNIPCGQFACAENAE 162
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFT---IIHAVYPKSLTDKK 226
VD+ REFT+T Q S +G K L K + L R N T +H V P++ ++
Sbjct: 163 GRVDTYVREFTYTAHQARSMFGVKALGPKAREVLERGGNPYATTLRFLHVVRPRTRRSRR 222
Query: 227 KDKGNK-GFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIR-- 283
+++ + F S ++S+D+ EE FPY+V R+ YG +P P I+
Sbjct: 223 REQASHMPFESVYLSLDDQVIVEEGGYMEFPYLVTRFLKWGSGPYGLAPGRLVFPAIQQV 282
Query: 284 ----RLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQ 339
R+ +T+ E+A F P I + DL+ G + ++ E SL P +
Sbjct: 283 QFLNRILDTLGEVAAF-------PRILELANQIGEVDLRAGGRTV--ITPEAASLHLPRE 333
Query: 340 FGNPLPYHEELNRL---KESIRSLFLLDLFQVLD-DKASRSAAESMEKTREKGAFVGPLI 395
+ Y ++RL +++IR + L + ++ + + +A E M + E+ P
Sbjct: 334 WATQGKYDVGMDRLAQKQDAIRRAYYLPMLELWSGHRGNMTATEVMARENERVLMFSPSF 393
Query: 396 GGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLK------VEYTSPLFKYQ--- 446
S+ M +R +L G P PP ++L+ V P YQ
Sbjct: 394 TLFVSDLYSTM-TRIFSLLFRMGKFP------RPPRAVLRVGRDGSVAVGEPRVVYQSKI 446
Query: 447 -------QAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRD 499
Q+E + +LQ +N +++ P DH+D D R S P ++R
Sbjct: 447 ALVLRRLQSEGMDRSLQRLNMMMQAA-----PDLADHVDWDHCFRLSARVDGAPESMLRP 501
Query: 500 TAEVEDIRQQRE 511
A+V +R++RE
Sbjct: 502 WADVRAMRKERE 513
>gi|212703348|ref|ZP_03311476.1| hypothetical protein DESPIG_01391 [Desulfovibrio piger ATCC 29098]
gi|212673194|gb|EEB33677.1| hypothetical protein DESPIG_01391 [Desulfovibrio piger ATCC 29098]
Length = 611
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 125/507 (24%), Positives = 221/507 (43%), Gaps = 53/507 (10%)
Query: 47 DTTGSEACIKLSSLLSSLITPPGQKWHGLA------ESFSAYQAFLYKEDARSKKVREWC 100
D TG A L++ L +T P + W LA A Q +L + +AR + V + C
Sbjct: 89 DATGILAMRTLAAGLQGGMTSPARPWFRLALDDPDLSRSHAGQRYLDEVEARMRVVLQRC 148
Query: 101 DQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLS 160
+ F + + Y + FGT + AD L G R++ +
Sbjct: 149 N----------------FYNAMHTIYAELGTFGTAFVFELAD-----LRHGFRFVPLCAG 187
Query: 161 NVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPK 220
+ + VD+V+ ++ Q+V +G + L ++ A R ++R +IHAV P+
Sbjct: 188 QYVLDTDAARRVDTVFHRMHMSLRQMVQSFGPEALPENLRLAARRTPDQRHAVIHAVLPR 247
Query: 221 SLTDKKKDKGNKGFHSKFVSV--DENR-----FFEEKQIATFPYIVGRYRVRADEIYGRS 273
+ +++ + H + SV E R +E FP R+ V A+++YGRS
Sbjct: 248 T---ERRPRLAGPCHMPWASVYWLEGREGQVVPLKESGFMGFPGFGPRWDVAANDVYGRS 304
Query: 274 PAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMN-IGALSREGR 332
PAM+ALP R L + + ++ PP + + DL PG +N + +L + +
Sbjct: 305 PAMDALPDCRMLQQMGITTLKAIHKAVDPPMSVHAGLRSVGLDLTPGGINFVDSLPGQNQ 364
Query: 333 SLFQPVQFGNP--LPYHEELNRLKESIRSLFLLDLFQ-VLDDKASRSAAESMEKTREKGA 389
+ P+ P + +++ IR+ DLF+ +L+ ++ +A+E + EK
Sbjct: 365 PVATPLLQVKPDLAQARSAMEAVQQQIRAGLYNDLFRLILEGRSKVTASEIAAREEEKLL 424
Query: 390 FVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVS--LLKVEYTSPLFKYQQ 447
+GP++ L E + +I R ++ + LP C P +S LKVE+ S L + Q+
Sbjct: 425 LIGPVLERLHDELLIPLIDRTFRLMLALDMLPPCP----PELSGRHLKVEFVSLLAQAQK 480
Query: 448 AESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIR 507
+++ Q + + L + P +D +D D + + P L R E +R
Sbjct: 481 LVGISATDQYL--ALTLKAASAWPEALDSVDVDNLLDNYAESLGLPVNLTRPREERARLR 538
Query: 508 QQREVQRRVMEEQHLQQQLQQTSQDIG 534
RE R+ EQ L L Q + D+G
Sbjct: 539 AGREEARQT--EQQL--ALLQKAADLG 561
>gi|187476929|ref|YP_784953.1| phage head-tail connector protein [Bordetella avium 197N]
gi|115421515|emb|CAJ48024.1| Putative phage head-tail connector protein [Bordetella avium 197N]
Length = 555
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 144/560 (25%), Positives = 252/560 (45%), Gaps = 55/560 (9%)
Query: 3 QRSAKDIQDRFNYLKNQRGE-LNYWMEELTGFLYPY--------KNNAQLR---MWDTTG 50
Q K + R+ LK +R +++W +E++ +L P +N R + D TG
Sbjct: 4 QTERKLLLSRWGQLKAERESWISHW-KEISDYLLPRSGRFFINDRNRGGKRHNNILDNTG 62
Query: 51 SEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGF 110
+ A L++ + + +T P + W L S E S V+ W VT +
Sbjct: 63 TRALRVLAAGMMAGMTSPARPWFRLTTSIP--------ELDESAAVKAWLANVTRLMLMV 114
Query: 111 RERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQN 170
+S + L S Y + FGT + D ++ IR+ ++ ++ ++Q
Sbjct: 115 FAKSNT--YRALHSTYEELGLFGTASSIVLPD-----FKDVIRHHTLSAGEYAIAADNQG 167
Query: 171 VVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERF-TIIHAVYPKSLTD-KKKD 228
VD++YREF TV Q+V ++G S+ +++ R E++ T+IHA+ P++ D K+D
Sbjct: 168 RVDTLYREFQITVAQMVREFGKDKCSTTVRNLFDRGALEQWVTVIHAIEPRADRDPNKRD 227
Query: 229 KGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLN 286
N + S +V + DE R E +F + R+ + +IYG SPAMEAL +R+L
Sbjct: 228 DRNMAWKSVYVELGADETRTLRESGYRSFRALCPRWALAGGDIYGNSPAMEALGDVRQLQ 287
Query: 287 ETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPG---YMNIGALSREGRSLFQ-PVQFGN 342
AQ +PP AK ++ PG Y+++ A + R+ F+ + +
Sbjct: 288 HEQLRKAQGIDYKSNPPLQLPVSAKNQDISTVPGGLSYVDVAAPNGGIRTAFEVNLDLSH 347
Query: 343 PLPYHEELNRLKESIRSLFLLDLFQVLDDKAS--RSAAESMEKTREKGAFVGPLIGGLQS 400
L ++ ++E I++ F DLF +L + + +A E E+ EK +GP++ + +
Sbjct: 348 LL---ADIVDVRERIKASFYADLFLMLANGTNPKMTATEVAERHEEKLLMLGPVLERMHN 404
Query: 401 EFIGAMISRELDILDSQGNLP----ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQ 456
E + +I + LP E +G D L VE+ S L + Q+A + S +
Sbjct: 405 EILDPLIELTFQRMVEANILPPPPQEMQGVD------LNVEFVSMLAQAQRAIATNSVDR 458
Query: 457 GVNTVVELGVKTG-DPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRR 515
V LGV P +D + DR + LI +V IR+QR Q++
Sbjct: 459 FVGN---LGVVAKIKPEVLDKFNADRWADTYADMLGIDPELIVPGNQVALIRKQRAEQQQ 515
Query: 516 VMEEQHLQQQLQQTSQDIGA 535
++ L Q T+ +G+
Sbjct: 516 AAQQAALLNQGADTAAKLGS 535
>gi|41179382|ref|NP_958690.1| Bbp21 [Bordetella phage BPP-1]
gi|45569514|ref|NP_996583.1| hypothetical protein BMP-1p20 [Bordetella phage BMP-1]
gi|45580765|ref|NP_996631.1| hypothetical protein BIP-1p20 [Bordetella phage BIP-1]
gi|40950121|gb|AAR97687.1| Bbp21 [Bordetella phage BPP-1]
Length = 555
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 143/560 (25%), Positives = 248/560 (44%), Gaps = 55/560 (9%)
Query: 3 QRSAKDIQDRFNYLKNQRGE-LNYWMEELTGFLYPY--------KNNAQLR---MWDTTG 50
Q K + R+ L+ +R +++W +E++ +L P +N + R + D TG
Sbjct: 4 QTERKLLLSRWGQLRTERESWMSHW-KEISDYLLPRAGRFFVQDRNRGEKRHNNILDNTG 62
Query: 51 SEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGF 110
+ A L++ + + +T P + W L S E S V+ W VT +
Sbjct: 63 TRALRVLAAGMMAGMTSPARPWFRLTTSIP--------ELDESAAVKAWLANVTRLMLMI 114
Query: 111 RERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQN 170
+S + L S Y + FGT + D D + + S+ ++ ++Q
Sbjct: 115 FAKSNT--YRALHSMYEELGAFGTASSIVLPDFDAV-----VYHHSLTAGEYAIAADNQG 167
Query: 171 VVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERF-TIIHAVYPKSLTD-KKKD 228
V+++YREF TV Q+V ++G S+ ++S R E++ T+IHA+ P++ D K+D
Sbjct: 168 RVNTLYREFQITVAQMVREFGKDKCSTTVQSLFDRGALEQWVTVIHAIEPRADRDPSKRD 227
Query: 229 KGNKGFHSKFV--SVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLN 286
N + S + DE R E +F + R+ + +IYG SPAMEAL +R+L
Sbjct: 228 DRNMAWKSVYFEPGADETRTLRESGYRSFRALCPRWALVGGDIYGNSPAMEALGDVRQLQ 287
Query: 287 ETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPG---YMNIGALSREGRSLFQ-PVQFGN 342
AQ +PP AK ++ PG Y++ A + R+ F+ + +
Sbjct: 288 HEQLRKAQAIDYKSNPPLQLPVSAKNQDISTVPGGLSYVDAAAPNGGIRTAFEVNLDLSH 347
Query: 343 PLPYHEELNRLKESIRSLFLLDLFQVLDDKAS--RSAAESMEKTREKGAFVGPLIGGLQS 400
L ++ ++E I++ F DLF +L + + +A E E+ EK +GP++ + +
Sbjct: 348 LL---ADIVDVRERIKASFYADLFLMLANGTNPQMTATEVAERHEEKLLMLGPVLERMHN 404
Query: 401 EFIGAMISRELDILDSQGNLP----ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQ 456
E + +I + LP E +G D L VE+ S L + Q+A + S +
Sbjct: 405 EILDPLIELTFQRMVEANILPPPPQEMQGVD------LNVEFVSMLAQAQRAIATNSVDR 458
Query: 457 GVNTVVELGVKTG-DPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRR 515
V LG G P +D D DR + LI +V IR+QR Q++
Sbjct: 459 FVGN---LGAVAGIKPEVLDKFDADRWADTYADMLGIDPELIVPGNQVALIRKQRADQQQ 515
Query: 516 VMEEQHLQQQLQQTSQDIGA 535
++ L Q T+ +G+
Sbjct: 516 AAQQAALLNQGADTAAKLGS 535
>gi|220903991|ref|YP_002479303.1| hypothetical protein Ddes_0717 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868290|gb|ACL48625.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 597
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/477 (25%), Positives = 201/477 (42%), Gaps = 45/477 (9%)
Query: 47 DTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKED-ARSKKVREWCDQVTD 105
D TG A L++ L +T P + W ++ L D ARS+ + W D+V
Sbjct: 59 DATGILAMRTLAAGLQGGLTSPARPW---------FRLGLDDADLARSRPGQAWLDEVA- 108
Query: 106 TLFGFRERS---RSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNV 162
R RS R F + + Y + FGT + AD +G R++ +
Sbjct: 109 ----ARMRSVFHRCNFYNAMHTLYAELATFGTAFVFELADP-----RDGFRFMPLCAGEY 159
Query: 163 YMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSL 222
+ + VD+V+R + ++ QIV +G L ++ A+ RN +ER +I AVYP+
Sbjct: 160 VLDCDAGRRVDTVFRRSSMSLRQIVQTFGPAALPESLREAVRRNADERRNVIQAVYPR-- 217
Query: 223 TDKKKDKGNKGFHSKFVSV-------DENRFFEEKQIATFPYIVGRYRVRADEIYGRSPA 275
D + H SV E FP R+ V +++YGRSPA
Sbjct: 218 -DDRIHGILTASHMPVASVYWLEGRDGGEHALRESGFRHFPGFGPRWDVAGNDVYGRSPA 276
Query: 276 MEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMN-IGALSREGRSL 334
M+ALP R L + + ++ PP + + DL PG +N + + +
Sbjct: 277 MDALPDCRMLQQMGITTLKAIHKAVDPPMSVSAGLRSVGLDLTPGGINYVDSAPGQSPQA 336
Query: 335 FQPVQFGNP--LPYHEELNRLKESIRSLFLLDLFQ-VLDDKASRSAAESMEKTREKGAFV 391
P+ NP + ++ IRS DLF+ +L+ ++ +A+E + EK +
Sbjct: 337 ATPLLQVNPDLSTARRAMESVQNQIRSGLYNDLFKLILEGRSGVTASEIAAREEEKLVLI 396
Query: 392 GPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVS--LLKVEYTSPLFKYQQAE 449
GP++ L E ++ R + + LP C P +S LKVE+ S L + Q+
Sbjct: 397 GPVLERLHDELFIPLMDRTFECMRELDMLPPCP----PELSGRRLKVEFVSLLAQAQKLV 452
Query: 450 SVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDI 506
V++A Q + + L T P +D ++ D + + P L R E E +
Sbjct: 453 GVSAADQYL--ALTLRASTAWPEALDTLNVDHLLDNYADSLGLPISLTRPPEEREQM 507
>gi|212710818|ref|ZP_03318946.1| hypothetical protein PROVALCAL_01886 [Providencia alcalifaciens DSM
30120]
gi|212686515|gb|EEB46043.1| hypothetical protein PROVALCAL_01886 [Providencia alcalifaciens DSM
30120]
Length = 550
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 130/507 (25%), Positives = 223/507 (43%), Gaps = 62/507 (12%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTTGSEACI 55
+D+ + + LKN+R +EL + P + ++ D +++
Sbjct: 5 QDLLKQLSQLKNERQSFEPHWKELAEYTRPRSTRFSTSEVNRGDRRNTKIIDQEAAKSER 64
Query: 56 KLSSLLSSLITPPGQKWHGLAE------SFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
LSS + S IT P +KW LA ++S + +L E +Q + +F
Sbjct: 65 TLSSGMMSGITSPARKWFRLATPDPDMMNYSPVKMWL-----------EVVEQRMNEVF- 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+RS L Y+ + F T + D E IR + P+ + Y++
Sbjct: 113 ----NRSNIYQSLPQTYSDIGTFATSALAVLEDN-----ERVIRTVPFPIGSYYIANGPD 163
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSAL-ARNENERFTIIHAVYPK-SLTDKKK 227
VD+ +REF+ TV Q+V ++G +S ++KS + N ++ T+IH+VYP + K
Sbjct: 164 LTVDTCFREFSMTVRQLVMEFGLDNVSEQVKSMWDSGNYSQWITVIHSVYPNLNRISGKL 223
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + + D +R E FP + R+ V +++YG S P M AL +++
Sbjct: 224 DAKNKLFKSVYFEIGGDSDRVLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMIALGSVKA 283
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPG---YMNIGALSREGRSLFQPVQFG 341
L AQ +PP A + K + L PG Y+ + + + +FQ
Sbjct: 284 LQLLQRRKAQQIDKVTNPPMQAPASIKNQRISLVPGGITYLPMAGADQMIKPIFQVQADI 343
Query: 342 NPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRS--AAESMEKTREKGAFVGPLIGGLQ 399
N L ++ + I+ + DLF +L + +RS +E EK +GP++ L
Sbjct: 344 NGL--IADIGDTRNQIKEAYFSDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLQRLD 401
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASAL 455
SE + +I+R I+ + LP PP + LKVEY S + + Q++ V S
Sbjct: 402 SELLDKLINRTFAIMARKNLLPV------PPEEMQGMQLKVEYISVMAQAQKSVGVNSVE 455
Query: 456 QGVNTVVELGVKTGDPSCMDHMDTDRV 482
+ V V G+ P +D ++TD +
Sbjct: 456 RFVGFVG--GLAKLKPEALDKLNTDEI 480
>gi|268589375|ref|ZP_06123596.1| conserved hypothetical protein [Providencia rettgeri DSM 1131]
gi|291315402|gb|EFE55855.1| conserved hypothetical protein [Providencia rettgeri DSM 1131]
Length = 550
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 131/507 (25%), Positives = 226/507 (44%), Gaps = 62/507 (12%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYPYK---NNAQL--------RMWDTTGSEACI 55
+D+ + + LKN+R +EL + P N +++ ++ D +++
Sbjct: 5 QDLLKQLSQLKNERQSFEPHWKELAEYTRPRSTRFNTSEVNRGDRRNTKIIDQEAAKSER 64
Query: 56 KLSSLLSSLITPPGQKWHGLAE------SFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
LSS + S IT P +KW LA ++S + +L E +Q + +F
Sbjct: 65 TLSSGMMSGITSPARKWFRLATPDPDMMNYSPVKMWL-----------EVVEQRMNEVF- 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+RS L Y+ + F T + D E IR + P+ + Y++
Sbjct: 113 ----NRSNIYQSLPQTYSDIGTFATSALAVLEDN-----ERVIRTVPFPIGSYYIANGPD 163
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSAL-ARNENERFTIIHAVYPK-SLTDKKK 227
VD+ +REF+ TV Q+V ++G +S ++KS + N ++ T+IH+VYP + K
Sbjct: 164 LTVDTCFREFSMTVRQLVMEFGLDKVSEQVKSLWDSGNYSQWITVIHSVYPNLNRISGKL 223
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + + D R E FP + R+ V +++YG S P M AL +++
Sbjct: 224 DAKNKLFKSVYFEMGGDSERVLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMIALGSVKA 283
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPG---YMNIGALSREGRSLFQPVQFG 341
L AQ +PP A + K + L PG Y+ + + + +FQ
Sbjct: 284 LQLLQRRKAQQIDKVTNPPMQAPASIKNQRISLVPGGITYLPMAGADQMIKPIFQVQADI 343
Query: 342 NPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRS--AAESMEKTREKGAFVGPLIGGLQ 399
N L ++ + I+ + DLF +L + +RS +E EK +GP++ L
Sbjct: 344 NGL--IADIGDTRNQIKEAYFSDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLQRLD 401
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASAL 455
SE + +I+R I+ + LP PP + LKVEY S + + Q++ V+S
Sbjct: 402 SELLDKLINRTFAIMARKNLLPV------PPEEMQGMQLKVEYISVMAQAQKSVGVSSIE 455
Query: 456 QGVNTVVELGVKTGDPSCMDHMDTDRV 482
+ V V G+ P +D ++TD +
Sbjct: 456 RFVGFVG--GLAQMKPEALDKLNTDEM 480
>gi|309702812|emb|CBJ02143.1| putative phage protein [Escherichia coli ETEC H10407]
Length = 559
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 126/514 (24%), Positives = 223/514 (43%), Gaps = 63/514 (12%)
Query: 16 LKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTTGSEACIKLSSLLSSL 64
LK++R +L+ F+ P + ++ D TGS A LSS + S
Sbjct: 16 LKSERTSFESHWRDLSDFINPRGSRFLTSDVNRDDRRNTKIIDPTGSMAQRILSSGMMSG 75
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQV---TDTLFGFRERSRSGFVGC 121
IT P + W LA + V+ W + V + +F ++S
Sbjct: 76 ITSPARPWFKLATPDPDMMDY--------GPVKVWLEVVQRRMNEVF-----NKSNLYQS 122
Query: 122 LQSFYTSVVEFGTGCF-YMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
L Y S+ FGT +E D D IR + P+ Y++ + + VD+ +R+F+
Sbjct: 123 LPVMYASLGTFGTAAMAVLEDDQDV------IRTMPFPIGCYYLANSPRGSVDTSFRQFS 176
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFT-IIHAVYPKSLTDK-KKDKGNKGFHSKF 238
TV Q+V ++G +SS ++ E + + H + P D K D NK F S +
Sbjct: 177 MTVRQLVQEFGLDNVSSSVQGMWQNGTYETWIEVNHCITPNVNRDTGKMDSKNKPFRSVY 236
Query: 239 VSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRRLNETVNELAQF 295
D ++ E FP + R+ V +++Y S P M AL ++ L AQ
Sbjct: 237 FETGGDADKLLRESGFDEFPILAPRWEVNGEDVYASSCPGMLALGQVKALQVEQKRKAQL 296
Query: 296 GRLSLHPPTIAVSEAKQRNFDLKPG---YMNIGALSREGRSLFQPVQFGNP--LPYHEEL 350
+ +PP +A + K + L PG Y+++ G+ F+P NP ++
Sbjct: 297 IDKATNPPMVAPTSLKTQRVSLLPGDVTYLDV----LSGQDGFKPAYLVNPNTADLLADI 352
Query: 351 NRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQSEFIGAMIS 408
+++I S + +DLF +L + +RS +E EK +GP++ L E + +I
Sbjct: 353 QDTRQTINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLNDECLNPLID 412
Query: 409 RELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASALQGVNTVVEL 464
R ++ + LP PP ++ LKVEY S + + Q++ ++S VN + +L
Sbjct: 413 RAFSMMVRKNMLPP------PPDAMEGMPLKVEYISVMAQAQKSIGLSSLASTVNFIGQL 466
Query: 465 GVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLI 497
P +D ++ D+ + F+ + +P V++
Sbjct: 467 A--QAKPEALDKLNVDQAIDAFADMSGVSPTVIV 498
>gi|290968647|ref|ZP_06560185.1| hypothetical protein HMPREF0889_0287 [Megasphaera genomosp. type_1
str. 28L]
gi|290781300|gb|EFD93890.1| hypothetical protein HMPREF0889_0287 [Megasphaera genomosp. type_1
str. 28L]
Length = 577
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 122/481 (25%), Positives = 220/481 (45%), Gaps = 59/481 (12%)
Query: 45 MWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVT 104
+++ ++A ++ + S +TPP +KW F+ A L ++ + E C+ +
Sbjct: 76 IYNGITAQARDTFAAGIQSGLTPPSRKWF----RFAPTDASLDNNIDVARVLDERCEIME 131
Query: 105 DTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYM 164
L S+S F + S Y + FG + AD E+G+ +++ + +
Sbjct: 132 GVL------SQSNFYNVIHSAYKEL-PFGQSPVGVFAD------EKGVYFVNYTIGTYAL 178
Query: 165 SVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARN--ENERFTIIHAVYPKSL 222
+ Q +++ R+ + QIVS +GD V++ ++ A+ N + +T+ VYP
Sbjct: 179 GADGQGRINTFARKVKMSAAQIVSLYGDSVVTDSVREAVKANGGHEDYYTVCWLVYPNP- 237
Query: 223 TDKKKDKGNKGFHS-KFVSV------DENRFFEEKQIATFPYIVGRYRVRADEIYGRSPA 275
K K G H KF+SV D N K + V RY V+ + YG PA
Sbjct: 238 ----KAKPTGGNHDMKFLSVHWLEGSDPNSLLAAKGFEEWAIPVARYNVKGIDAYGIGPA 293
Query: 276 MEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYM--------NIGAL 327
+ALP R L + + A LS+ PP + +E + R +L PG N+ ++
Sbjct: 294 WDALPESRMLQKMEYDGAIALELSIKPPLVGPAELQGR-INLFPGAYTPSINPNDNVHSI 352
Query: 328 SREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLD--DKASRSAAESMEKTR 385
G L N L ++ ++++ I+ ++ DLF +L+ ++ +A E M + +
Sbjct: 353 YSGGLDL-------NSL--QAKITQIEDRIKRIYSTDLFLMLNELNRGQMTAQEVMARNQ 403
Query: 386 EKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSL----LKVEYTSP 441
EK A +GP+I LQ+EF+ +I R ++L+ P D+ +L +K+EY SP
Sbjct: 404 EKMAQLGPVIERLQNEFLSDIIERVYNLLERNQVFPPL--PDDVQQTLQGQEIKIEYLSP 461
Query: 442 LFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTA 501
L + Q+ + + QGV+ V +L DP+ + ++ D+ L P+ +IR
Sbjct: 462 LAQAQKMSGLTAIEQGVSFVGQLA--QLDPNVILRVNFDKAVENYLDKLGVPSTMIRTED 519
Query: 502 E 502
E
Sbjct: 520 E 520
>gi|262043566|ref|ZP_06016679.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039100|gb|EEW40258.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 560
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 126/512 (24%), Positives = 221/512 (43%), Gaps = 59/512 (11%)
Query: 16 LKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTTGSEACIKLSSLLSSL 64
L N R + EL+ F+ P + ++ D T + A LSS + S
Sbjct: 17 LTNDRSSFDPHWRELSDFINPRGSRFLVTDVNRDDRRNTKIVDPTATLAARTLSSGMMSG 76
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQV---TDTLFGFRERSRSGFVGC 121
IT P + W LA + V+ W + V + +F ++S
Sbjct: 77 ITSPARPWFKLATPDPDMMDY--------GPVKLWLEVVQRRMNEVF-----NKSNIYQS 123
Query: 122 LQSFYTSVVEFGTGCF-YMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
L Y S+ + TG +E D D IR + P+ + YM+ + + VD+ +R+F+
Sbjct: 124 LPLLYASLGNYSTGAMAVLEDDSDV------IRTMMFPIGSYYMANSARGSVDTCFRKFS 177
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFT-IIHAVYPKSLTDKKK-DKGNKGFHSKF 238
TV Q+V ++G +S +K E + +IHAVYP D K + NK S +
Sbjct: 178 MTVRQLVMEFGLNNVSDSVKGMWDSGNYESWIEVIHAVYPNIDRDTAKLNSKNKPVKSVY 237
Query: 239 VSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRRLNETVNELAQF 295
V D ++ E FP + R+ V +++YG S P M AL ++ L +Q
Sbjct: 238 YEVGGDSDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMIALGQVKALQLEQKRKSQL 297
Query: 296 GRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSR-EGRSLFQPVQFGNP--LPYHEELNR 352
+ +PP + S + + L PG +I + + G+ F+P NP ++
Sbjct: 298 IDKATNPPMVGPSSLRNQRVSLLPG--DITYIDQVTGQDGFKPAYLVNPNTADLLADIQD 355
Query: 353 LKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQSEFIGAMISRE 410
++ I S + +DLF +L + +RS +E EK +GP++ L E + +I R
Sbjct: 356 TRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLNDECLNPLIDRT 415
Query: 411 LDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
I+ + LP PP L L++EY S + + Q++ ++S V + +L
Sbjct: 416 FSIMARKNLLPP------PPDVLQGMPLRIEYISVMAQAQKSIGLSSLSSTVGFIGQLA- 468
Query: 467 KTGDPSCMDHMDTDR-VSRFSLWATNTPAVLI 497
P +D ++ D+ + F+ + +P V++
Sbjct: 469 -QAKPEALDKLNVDQAIDAFAEMSGVSPTVIV 499
>gi|144899435|emb|CAM76299.1| head-to-tail joining protein [Magnetospirillum gryphiswaldense
MSR-1]
Length = 502
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 124/485 (25%), Positives = 203/485 (41%), Gaps = 64/485 (13%)
Query: 44 RMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQV 103
R++D T ++A +L++ L S +TPP +W GL ++A ++V D+V
Sbjct: 62 RLFDGTAADAVDQLAASLLSELTPPWAQWFGLTAGPDL-------DEAERQQVAPLLDKV 114
Query: 104 TDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVY 163
L +RS F + Y VV GT C E + G R+ +VPL+
Sbjct: 115 GAILQSHFDRS--NFAVEMHQCYLDVVTGGTACLLFEEA--QPGEASAFRFTAVPLAQAV 170
Query: 164 MSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLT 223
+ +DS +R T+ + ++ L + + RF +I AV P
Sbjct: 171 LEEGPDGKLDSSFRRSELTLAALRQRFPAAQLDPSLIRRGEEDPQARFAVIEAVIP---- 226
Query: 224 DKKKDKGNKGFHSKFVSV------DENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAME 277
N+ H + ++ D+ E + P+I R+ EIYGRSP M+
Sbjct: 227 -------NQRGHYDYAAILEDATDDDEALLAEGRFGQSPFINFRWLKAPGEIYGRSPVMK 279
Query: 278 ALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQ---------RNFDLKPGYMNIGALS 328
ALP I+ N+ V L L TIAV+ Q N L PG + A+
Sbjct: 280 ALPDIKTANKVVE-------LVLKNATIAVTGIWQADDDGVLNPANIKLIPGTIIPKAVG 332
Query: 329 REGRSLFQPVQFGNPLPYHE-ELNRLKESIRSLFLLD-LFQVLDDKASRSAAESMEKTRE 386
G QP++ + L+ L+ IR L D L Q D +A E +E++ +
Sbjct: 333 SAG---LQPLESPGRFDISQLVLDDLRGRIRHALLADKLGQA--DNPKMTATEVLERSAD 387
Query: 387 KGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPE--CEGADNPPVSLLKVEYTSPLFK 444
+G G LQSE + +I R + IL +G +P +G L++++Y SPL +
Sbjct: 388 MARLLGATYGRLQSELLTPLILRAVTILRRRGEIPPLLVDG------HLVELQYRSPLAQ 441
Query: 445 YQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
Q + L ++ + +LG P+ M +D +++ A N PA L+ E
Sbjct: 442 SQAQRDAHNVLSWLSALAQLG-----PAGMAVVDPAAAAQWLGRAFNIPADLMVAPQNPE 496
Query: 505 DIRQQ 509
++ Q
Sbjct: 497 NVHVQ 501
>gi|291334466|gb|ADD94120.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1161]
Length = 330
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 156/330 (47%), Gaps = 28/330 (8%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLR----------MWDTTGSEACI 55
AK++ R++ LK+QR +E+ ++ P K + ++D + ++
Sbjct: 7 AKNLLKRYDRLKSQRQNWESHWQEVADYMQPRKADVTKTRSKGDKRTELIFDGSPLQSVE 66
Query: 56 KLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSR 115
L++ L ++T P W L F ++ + + W + TD ++ +R
Sbjct: 67 LLAASLHGMLTNPSTPWFTLR--------FKDEDIDNEDEAKLWLEASTDAMYT--AFNR 116
Query: 116 SGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSV 175
S F + Y ++ FGT ++E D DE ++ R+I+ V+++ N + +D+V
Sbjct: 117 SNFQQEIFELYHDLITFGTAAMFIEED-DEDIIKFSTRHIN----EVFIAENDKGRIDTV 171
Query: 176 YREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTD-KKKDKGNKGF 234
+R+F+ + ++ K+GD +S + + ++ E I+HAVYP+S D +K+DK N F
Sbjct: 172 FRKFSLSARAVMQKFGD--VSINIATKAKKDPYEEVEIMHAVYPRSDFDPRKQDKENMPF 229
Query: 235 HSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQ 294
S ++ + FP++V RY + EIYGRSPAM ALP ++ LNE +
Sbjct: 230 ESVYLDAESGDELSVSGFREFPFVVPRYLKASHEIYGRSPAMTALPDVKMLNEMSKTTIK 289
Query: 295 FGRLSLHPPTIAVSEAKQRNFDLKPGYMNI 324
+ + PP + + PG +N
Sbjct: 290 SAQKQVDPPLLVPDDGFMLPVRTIPGGLNF 319
>gi|330007155|ref|ZP_08305897.1| hypothetical protein HMPREF9538_03586 [Klebsiella sp. MS 92-3]
gi|328535502|gb|EGF61962.1| hypothetical protein HMPREF9538_03586 [Klebsiella sp. MS 92-3]
Length = 559
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 135/527 (25%), Positives = 225/527 (42%), Gaps = 70/527 (13%)
Query: 16 LKNQRGELNYWMEELTGFLYPY--------KNNA---QLRMWDTTGSEACIKLSSLLSSL 64
LKN+R EL F+ P +NN R+ D T S+A L S + S
Sbjct: 17 LKNERTSFEEHWRELAEFIDPRSTRFLTTERNNGSKRNTRIVDPTASKAARTLQSGMLSG 76
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQS 124
IT P + W LA + V+ W D V + +RS L
Sbjct: 77 ITSPTRPWFKLATPDPEMMQY--------GPVKRWLDVVMTRMNDVM--NRSNVYQSLPI 126
Query: 125 FYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVD 184
Y + FGT + D E+ IR +P+ + Y+S +H+ VD+ YR F+ T
Sbjct: 127 IYRHLGVFGTAAMAVLEDD-----EDVIRTHPLPIGSYYLSNSHRLSVDTTYRVFSMTAR 181
Query: 185 QIVSKWGDKVLSSKMKSALAR-NENERFTIIHAVYPK-SLTDKKKDKGNKGFHSKF--VS 240
QIV ++G +S+ ++ A N F ++H P + K + NK F S + +S
Sbjct: 182 QIVMQFGLDNVSNAVRGAWDNANYEAWFDVVHLTEPNIDRVNGKLNSRNKAFKSVYFELS 241
Query: 241 VDENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRRLN-ETVNELAQFGRL 298
D ++ E P + R+ + +++YG + P M AL T + L E + + +L
Sbjct: 242 GDGDKLLREAGFDEPPILSPRWEINGEDVYGSNCPGMMALGTGKALQLEQIRKANAIDKL 301
Query: 299 SLHPPTIAVSEAKQRNFDLKPG---YMNIGALSREGRSLFQPVQFGNPLPYHEELNRL-- 353
++PP +A + K + +L PG Y++ + L +P +P +LN +
Sbjct: 302 -VNPPMVAPTGLKNKLINLAPGGVTYVD----EVDATKLVRPAYAVSP-----QLNDMLG 351
Query: 354 -----KESIRSLFLLDLFQVLDDKASRS----AAESMEKTREKGAFVGPLIGGLQSEFIG 404
++ I + F DLF + +RS A +M+ EK +GP++ L EF+
Sbjct: 352 SIADDRQMIEACFFSDLFNLFSTINTRSMPVEAVAAMQD--EKLLQLGPVLERLNDEFLD 409
Query: 405 AMISRELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASALQGVNT 460
+ R +I+ + PE PP L LKVEY S L + Q++ ++S + V
Sbjct: 410 PFVDRTFNIMARRNLFPE------PPEELQGTPLKVEYVSILAQAQKSIGISSVERFVGF 463
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIR 507
V L +P+ +D ++ D+ PA ++ EV+ R
Sbjct: 464 VGNLA--KANPAALDKLNIDQTIDEYGNMLGVPATIVNSDDEVQATR 508
>gi|226940462|ref|YP_002795536.1| Bbp21 [Laribacter hongkongensis HLHK9]
gi|226715389|gb|ACO74527.1| Bbp21 [Laribacter hongkongensis HLHK9]
Length = 555
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 126/502 (25%), Positives = 218/502 (43%), Gaps = 55/502 (10%)
Query: 7 KDIQDRFNYLKNQRGE-LNYWMEELTGFLYPYK-----------NNAQLRMWDTTGSEAC 54
K + R+ LK +R +++W E++ +L P N ++D TG+ A
Sbjct: 8 KRVSARWEALKKERSSWMSHW-SEISDYLLPRSGRFFVEDRNKGNKRHKNIYDNTGTRAL 66
Query: 55 IKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERS 114
L++ + + +T P + W L S S V+ W VT + +S
Sbjct: 67 RVLAAGMMAGMTSPARPWFRLTTSDPQLD--------ESAAVKAWLADVTRIMQMVFAKS 118
Query: 115 RSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDS 174
+ L S Y + FGT + D + G+ I + + ++ +++ V++
Sbjct: 119 NT--YRALHSCYEELGAFGTAGTIVLPDFN--GV---IHHHVLTAGEFAIAADYRGQVNT 171
Query: 175 VYREFTFTVDQIVSKWGDKVLSSKMKSALAR-NENERFTIIHAVYPKSLTDK-KKDKGNK 232
+YREF TV Q+V ++G S+ ++ R +E T+IHA+ P++ K ++D N
Sbjct: 172 LYREFQMTVGQMVGEFGLSACSATVQRLHERWCLDEWITVIHAIEPRTDRHKGRQDARNM 231
Query: 233 GFHSKFVSVD--ENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVN 290
+ S + E + E FP + R+ +IYG SPAME+L I++L
Sbjct: 232 AWRSVYFEPGNREGQVLRESGFREFPALCPRWSTSGGDIYGNSPAMESLGDIKQLQHEQL 291
Query: 291 ELAQFGRLSLHPPTIAVSEAKQRNFDLKPG---YMNIGALSREGRSLFQPVQFGNPLPY- 346
Q PP S + R+ D PG +++ G + RS F + G L +
Sbjct: 292 RKGQVIDYKTKPPLQVPSSMRARDIDTLPGGVSFVDAGTPNGGIRSAF---EVGLDLSHL 348
Query: 347 HEELNRLKESIRSLFLLDLFQVLDDKAS--RSAAESMEKTREKGAFVGPLIGGLQSEFIG 404
++ ++E I+ F DLF +L + ++ +A E E+ EK +GP++ L +E +
Sbjct: 349 LADIQDVRERIKGSFYADLFLMLANGSNPQMTATEVAERHEEKLLMLGPVLERLHNEILD 408
Query: 405 AMISRELDILDSQGNLP----ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
+I + G +P E +G D L VE+ S L + Q+A + S + V
Sbjct: 409 PLIEMTFSRMVEAGIVPPPPEELQGVD------LNVEFVSMLAQAQRAIATNSVDRFVGN 462
Query: 461 VVELGVKTG-DPSCMDHMDTDR 481
LG G P +D D DR
Sbjct: 463 ---LGAVAGIKPEVLDKFDADR 481
>gi|303328393|ref|ZP_07358830.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
gi|302861387|gb|EFL84324.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
Length = 567
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 192/470 (40%), Gaps = 55/470 (11%)
Query: 38 KNNAQLRMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKV- 96
KN + D+TG A L++ + +T P + W GL L D+ +
Sbjct: 50 KNLLNPEVVDSTGIYALRTLAAGMQGGMTSPARPWFGLR---------LEGGDSGDGGIT 100
Query: 97 -REWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYI 155
R W D+V + + S F G + Y + FGT C + AD+ G +
Sbjct: 101 ARAWIDEVVERMRTILHTSN--FYGVIYQAYAQLAAFGTACVFERADM------SGFTFD 152
Query: 156 SVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSAL--ARNENERFTI 213
+ V+ VD+V R+ T Q+ ++G+ L +K++L A N R +
Sbjct: 153 CCQAGTFVLDVDAGGRVDTVMRKIWLTARQMAQEFGEDALPDMVKTSLNNASMGNVRHAV 212
Query: 214 IHAVYPKSLTDKKKDKGNKGFHSKFVSVDENRF---------FEEKQIATFPYIVGRYRV 264
HAVYP+ +++ N G F SV R E +FP+ R+ V
Sbjct: 213 FHAVYPRREPGLRRETIN-GARRPFASVYWMRGMSGAGGYHPLRESGFDSFPFFGVRWNV 271
Query: 265 RADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMN- 323
+ ++YG SPAM+ +P R L + + + PP +E + DL PG +N
Sbjct: 272 LSGDVYGTSPAMDTMPDCRMLQQMAKTTLKGVHKMVDPPVNVAAELQSVGVDLTPGGVNY 331
Query: 324 IGALSREGRSL-----FQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASR--S 376
+ + G ++ QP + ++KE + + DLF++L R +
Sbjct: 332 VSMMGNNGAAVTPVLKVQPDVAAAQAMIQQVQQQIKEGLYN----DLFRMLLGTNRRQIT 387
Query: 377 AAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSL--- 433
A E + EK +GP++ L E +I R ++D LP P L
Sbjct: 388 ATEVDAREAEKMILIGPVLERLHDELFIPLIDRTFALMDKFNALPPV------PEELAGR 441
Query: 434 -LKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRV 482
LKVE+ S L + Q+ S Q + + G DPS +D ++ DR+
Sbjct: 442 GLKVEFISTLAQAQKLVSTGGIQQLLAFIG--GAAQVDPSVLDALNGDRL 489
>gi|332160969|ref|YP_004297546.1| hypothetical protein YE105_C1347 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665199|gb|ADZ41843.1| Hypothetical phage protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862125|emb|CBX72289.1| hypothetical protein YEW_AK02260 [Yersinia enterocolitica W22703]
Length = 534
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 118/473 (24%), Positives = 197/473 (41%), Gaps = 40/473 (8%)
Query: 44 RMWDTTGSEACIKLSSLLSSLITPPGQKWHGL-AESFSAYQAFLYKEDARSKKVREWCDQ 102
R+ D T +++ L+S L S +TP +W L +E+ S +D RS W
Sbjct: 57 RLLDGTATDSARILASALMSGMTPANAQWLDLGSENLS--------DDERS-----WLS- 102
Query: 103 VTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNV 162
T + + F VV G Y VDE + G + PL+ V
Sbjct: 103 -TCATLTWENIHAANFDAEGYEANIDVVCAGWFALY----VDEDTEQGGYTFNQWPLAQV 157
Query: 163 YMSVNHQN-VVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPK- 220
+++ + ++ VV++VYR + T +Q V ++G +S K++ A + +++F IHA++P+
Sbjct: 158 FVASSRRDGVVNTVYRCYQLTAEQAVKEFGRDNVSHKIQDAANKKPDDKFEFIHAIFPRD 217
Query: 221 SLTDKKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALP 280
+ N F S V V E + E FP V R+ YG P +ALP
Sbjct: 218 GYIGNARLAKNLPFASFNVEVAEKKVVRESGYHEFPVCVPRWMKIPGTPYGVGPVYDALP 277
Query: 281 TIRRLNETVNELAQFGRLSLHPPTIAVSEA--KQRNFDLKPGYMNIGALSREGRSLFQPV 338
+ LNET L++ IA + R ++ P + + + L
Sbjct: 278 DCKELNETKRMEKAAQDLAIAGMWIAEDDGVLNPRTVNVGPRKIIVANSVNSMKPLLTGA 337
Query: 339 QFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGL 398
F E RL+ IR + + D Q D A +A E + +GP+ G
Sbjct: 338 DFNVAFTAEE---RLQAQIRKILMADQLQPQDGPA-MTATEVHVRVALIRQLLGPVYGRF 393
Query: 399 QSEFIGAMISRELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASA 454
Q+E++ ++ R I G P+ P S+ + Y SPL + Q+ E V +
Sbjct: 394 QAEYLQPLVERCFGIAFRAGVFPQM------PESMAQANFNIRYISPLARAQKLEDVTAI 447
Query: 455 LQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIR 507
+ + +L +P +D+MD D +R A PA ++R A+V +R
Sbjct: 448 ERLGANIAQLAAI--NPEVIDNMDADAAARVVSDALGVPAKVLRSAADVTALR 498
>gi|83313332|ref|YP_423596.1| hypothetical protein amb4233 [Magnetospirillum magneticum AMB-1]
gi|82948173|dbj|BAE53037.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
Length = 545
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 192/465 (41%), Gaps = 49/465 (10%)
Query: 44 RMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQV 103
R++D T + +L++ L S +TPP +W GLA +A + ++ + E V
Sbjct: 78 RLFDGTAPDCVDQLAASLLSELTPPWAQWFGLAAGDQMPEA----DRDQAAPLLERIAAV 133
Query: 104 TDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVY 163
+ F RS F + Y V GT E G R+ SVPL V
Sbjct: 134 MQSHF-----DRSNFAIEMHQCYLDAVTGGTASLMFEEA--PPGEPSAFRFTSVPLGQVV 186
Query: 164 MSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLT 223
+ +D +R +V + +++ VL ++ A A + + R ++ AV P
Sbjct: 187 LEEGPAGRLDVTFRRSELSVAALKARFPRAVLPREVIKAAADDPDLRLGVVEAVVPV--- 243
Query: 224 DKKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIR 283
+G + + + Q ++ P++ R+ E+YGRSP M+ALP I+
Sbjct: 244 -----RGGYSYAAVLDDDGSDLVLGRGQFSSSPFLNFRWLKAPGEVYGRSPVMKALPDIK 298
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQ---------RNFDLKPGYMNIGALSREG-RS 333
N+ V L L TIAV+ Q N L PG + A+ G +
Sbjct: 299 TANKVVE-------LVLKNATIAVTGIWQADDDGVLNPANIKLVPGTIIPKAVGSAGLQP 351
Query: 334 LFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGP 393
L P +F L+ L+ IR + D A +A E +++ + +G
Sbjct: 352 LTAPGRFDT---SQLVLDDLRGRIRHALMGDKLSQPASPA-LTATEVLQRADDMARLLGA 407
Query: 394 LIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVAS 453
G LQSE + +I R + IL +G +P + D + ++Y SPL + Q +
Sbjct: 408 TYGRLQSELLTPLILRAIHILRRRGEIPPLQ-VDG---RTIDLQYRSPLAQNQGRRDARN 463
Query: 454 ALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIR 498
L + + LG PS + +D+D +R+ A N P+ LIR
Sbjct: 464 VLNWLGALSSLG-----PSALATVDSDAAARWLARAFNVPSELIR 503
>gi|225158777|ref|ZP_03725094.1| hypothetical protein ObacDRAFT_8203 [Opitutaceae bacterium TAV2]
gi|224802612|gb|EEG20867.1| hypothetical protein ObacDRAFT_8203 [Opitutaceae bacterium TAV2]
Length = 562
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 200/462 (43%), Gaps = 51/462 (11%)
Query: 45 MWDTTGSE-ACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQV 103
++D+T +E A + + LLSSL+ P G+ W FSA S V EW D
Sbjct: 61 IYDSTANESALVYAAGLLSSLV-PAGELWF----RFSA-------RPGASAPVVEWFDDC 108
Query: 104 TDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGI-RYISVPLSNV 162
T S F + + + F + E +G G+ + +VP+
Sbjct: 109 THRAAA--ALHASNFYLGIHEDFMDMAGFSIASLFCEEGAALRGQRGGLLNFTNVPVGTF 166
Query: 163 YMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSAL----ARNENERFTIIHAVY 218
+ + + +VD+V+REF FT Q KWG+ LS M AL A + ++RF IIHAVY
Sbjct: 167 VIEEDAEGLVDTVFREFRFTARQCAQKWGEDKLSKPMLDALNSKTASDRDKRFQIIHAVY 226
Query: 219 PKSLTDKKKDKG---NKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPA 275
P+ D K+ G + S +V EE P V R +EIYGR P
Sbjct: 227 PRR--DGKQGPGIGKKRPIASVYVDKQAIHVIEEGGFYEMPIAVARLLRGNNEIYGRGPG 284
Query: 276 MEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPG---YMNIGALSREGR 332
+ +P I+ +N +L ++PP +A ++ R D +PG Y + + +
Sbjct: 285 DQVMPEIKLVNRMERDLLLSLEQQVNPPWLAPQDSSWRP-DNRPGGVFYWDASNPNNKPE 343
Query: 333 SLFQPVQF--GNPLPYHEELNRLKESIRSLFLLDLFQVLDD----KASRSAAESMEKTRE 386
L + G+ + LN +E IR + +D+F++L + K ++A E + +E
Sbjct: 344 RLRDTARLDIGDKV-----LNDKREVIRRAWFVDMFKMLSNPDAMKRDKTAFEVAQLMQE 398
Query: 387 KGAFVGPLIGGLQSEFIGAMISRELDILDSQGNL---PECEGADNPPVSL-LKVEYTSPL 442
K P+ + E + ++ R +IL G P EG SL +++Y S +
Sbjct: 399 KLVLFHPMFARITQEKLNPVLERVFNILMRAGIFAPPPMAEGE-----SLEYEIDYVSKI 453
Query: 443 FKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSR 484
+A + Q ++ + G+ T DP+ ++ + +R
Sbjct: 454 ALAIKAAQNGALAQMMDLIG--GMATFDPTVALVINWKKAAR 493
>gi|85059164|ref|YP_454866.1| hypothetical protein SG1186 [Sodalis glossinidius str. 'morsitans']
gi|84779684|dbj|BAE74461.1| hypothetical phage protein [Sodalis glossinidius str. 'morsitans']
Length = 541
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 133/534 (24%), Positives = 219/534 (41%), Gaps = 63/534 (11%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKN--------NAQ------LRMW 46
M++ + K I R + LK+ R E + YP + +AQ ++
Sbjct: 1 MDELAVKLIT-RADTLKSHRQRHESVWRECYDYTYPLRGAGFSADVLDAQSAKSKVAKLL 59
Query: 47 DTTGSEACIKLSSLLSSLITPPGQKWHGL-AESFSAYQAFLYKEDARSKKVREW---CDQ 102
D T +++ L+S L S +TP +W L +ES +DA++ W C
Sbjct: 60 DGTATDSARMLASALMSGMTPANAQWLNLDSESLP--------DDAKA-----WLSGCAT 106
Query: 103 VTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNV 162
+ G+ L VV G Y +DE E G + PLS
Sbjct: 107 LVWENIHAANFDAEGYEANL-----DVVCAGWFVLY----IDENREEGGYMFQQWPLSQC 157
Query: 163 YM-SVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYP-K 220
Y+ S +VD++YR + T +Q ++++G+ +S K++ A +++F +HA++P K
Sbjct: 158 YVASTRKDGIVDTIYRCYQMTAEQAIAEFGEAGVSEKIRRAAKDKPDDKFDFLHAIFPRK 217
Query: 221 SLTDKKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALP 280
+ + + F S V R E FP V R+ + YG P +ALP
Sbjct: 218 NYVVNARLAKHLRFASFHVERQGKRIVRESGYHEFPVCVPRWMKISGGAYGIGPVYDALP 277
Query: 281 TIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQF 340
+ LNET L++ IA + + +K G I + + +P+
Sbjct: 278 DCKELNETKRMEKAAQDLAISGMWIAEDDGVINPYSVKVGPRRI--IVASSVNSMKPLLT 335
Query: 341 GNPLPYHEEL---NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGG 397
G +H +RL+ SIR + + D Q D A +A E + +GP+ G
Sbjct: 336 GAD--FHVAFTAEDRLQASIRKIMMADQLQPQDGPA-MTATEVHVRVALIRQLLGPVYGR 392
Query: 398 LQSEFIGAMISRELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVAS 453
Q+E++ ++ R I G P PP S+ V Y SPL + Q+ E V +
Sbjct: 393 FQAEYLQPLVERCFGIAFRAGVFPA------PPDSMQTAHFNVRYISPLARAQKLEDVTA 446
Query: 454 ALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIR 507
+ V +L + P +D +DTD R A PA +IR A+V +R
Sbjct: 447 IERLGANVAQLSQVS--PEVVDLVDTDEAMRVVADALGVPAKVIRSAADVTSLR 498
>gi|303257564|ref|ZP_07343576.1| conserved hypothetical protein [Burkholderiales bacterium 1_1_47]
gi|302859534|gb|EFL82613.1| conserved hypothetical protein [Burkholderiales bacterium 1_1_47]
Length = 548
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 213/474 (44%), Gaps = 38/474 (8%)
Query: 92 RSKKVREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEG 151
++ V+EW +V D L + S++ L Y + FGT C ++ E+
Sbjct: 94 KNPAVKEWMTKVQDLLLLYF--SKAECYNALHQSYLELPVFGTACTIVKPHP-----EQL 146
Query: 152 IRYISVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERF 211
I ++ + +++ + VD++YR + T Q+V +WG + +++ ++ A ++ RF
Sbjct: 147 ISLQNLTIGEYWLAEDDYGKVDTMYRRLSLTAKQMVQQWGFEAVNNDVRQAFEKDPFTRF 206
Query: 212 TIIHAVYPK-SLTDKKKDKGNKGFHSKFVSVD-ENRFFEEKQIATFPYIVGRYRVRADEI 269
+IHA+ P+ K+D N + S + +++ E FP + R+ +
Sbjct: 207 NVIHAIEPRIERNPDKRDNKNMPWQSVYFQEGVQDKVLSESGFRNFPALCPRWMTSGGSV 266
Query: 270 YGRSPAMEALP---TIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGA 326
YGR P +AL +++RL+ + EL +G PP + S K + KPG +
Sbjct: 267 YGRGPGAKALSAQKSLQRLHLRLAELVDYGT---RPPILYPSTLKDQLSQFKPGG-RVAV 322
Query: 327 LSREG---RSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKAS---RSAAES 380
+E RS+++ +P + ++ I+ +F +++FQ++ A+ R+A E
Sbjct: 323 NPQEAPIIRSMWE--VRTDPQAMLALIQSTRQDIQRIFFVNVFQMIAATANQTDRTATEV 380
Query: 381 MEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSL----LKV 436
+EK +GP++ L +E + +++ + LPE P L L +
Sbjct: 381 QALEQEKVMMLGPVLERLHTELLDPLVTNAFGFMVEYNMLPEV------PEELYGRELSI 434
Query: 437 EYTSPLFKYQQAESVASALQGVNTVVELGVKTG-DPSCMDHMDTDRVSRFSLWATNTPAV 495
EY S L +A+ ASA V T ++G+ +P +D +D D P
Sbjct: 435 EYVSVL---AEAQKNASANGIVRTAQQIGLLAQINPQAVDKLDVDATIDQLADMNGVPPS 491
Query: 496 LIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHD 549
LI +V IRQQR Q++ + QQ + +D+G A + +++ + +
Sbjct: 492 LIVTGQKVALIRQQRAEQQQAQMQAAQLQQAMTSLKDLGQAADSQGLQEAFSEE 545
>gi|288957023|ref|YP_003447364.1| hypothetical protein AZL_001820 [Azospirillum sp. B510]
gi|288909331|dbj|BAI70820.1| hypothetical protein AZL_001820 [Azospirillum sp. B510]
Length = 534
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 187/432 (43%), Gaps = 43/432 (9%)
Query: 44 RMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQV 103
R++D T +A +L++ L S +TPP +W G F E R + + +
Sbjct: 68 RLFDGTAPDAVEQLAASLLSELTPPWSRWFG----FRPGPDLTGAERDRIAPLLDRAAGI 123
Query: 104 TDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVY 163
F RS F + + +V GT ME G +R+ +VPL++
Sbjct: 124 IQAHF-----DRSNFAVEVHQAFLDLVTVGTASLLMEEAA--PGAVSSLRFTAVPLADAV 176
Query: 164 MSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLT 223
+ +D+ +R T+ QI+ ++ L +++ A + + RF ++ AV P
Sbjct: 177 LEEGPDGRLDATFRRSEATLAQILQRFPGAGLPDELRRRAAEDPDHRFPLVEAVVPDGAA 236
Query: 224 DKKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIR 283
+ + G + + + + A P++ R+ E YGRSP M+ALP I+
Sbjct: 237 YRWGVVLDSGLA-------DPSWLAQGRFAQSPFVNFRWLKAPGETYGRSPVMKALPDIK 289
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQRNFD---------LKPGYMNIGALSREGRS- 333
N+ V L L +IAV+ Q + D L PG + A+ G +
Sbjct: 290 TANKVVE-------LVLKNASIAVTGIWQADDDGVLNPSTIRLVPGTIIPKAVGSAGLTP 342
Query: 334 LFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGP 393
L P +F L+ L+ IR L+D + D A +A E +E++ E +G
Sbjct: 343 LANPGRFDV---SQLVLDDLRGRIRHALLVDRLGPV-DSARMTATEVLERSVEMARLLGA 398
Query: 394 LIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVAS 453
G LQ+E + ++ R + IL +G +P+ D L+++++ SPL + Q V +
Sbjct: 399 TYGRLQAELMTPLLLRAVSILRRRGEIPDIT-VDG---RLVELQHRSPLAQAQAQRDVQA 454
Query: 454 ALQGVNTVVELG 465
L+ +++V LG
Sbjct: 455 TLRWLDSVKALG 466
>gi|46581008|ref|YP_011816.1| hypothetical protein DVU2604 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46450429|gb|AAS97076.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234693|gb|ADP87547.1| hypothetical protein Deval_2404 [Desulfovibrio vulgaris RCH1]
Length = 569
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 208/491 (42%), Gaps = 56/491 (11%)
Query: 44 RMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDAR-SKKVREWCDQ 102
R+ D T + A L++ + +T P + W ++ L ED + R W D
Sbjct: 56 RIIDGTATRAVRILAAGMQGGLTSPARPW---------FRLRLADEDMEEAGPERRWLDV 106
Query: 103 VTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNV 162
V L+ +RS F + YT + FG+ Y EAD + +R+ + +
Sbjct: 107 VERRLYA--ALARSNFYAAVHGLYTELAAFGSADMYHEADP-----QRVMRFSCLACGDF 159
Query: 163 YMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPK-- 220
+ + VD+V R + Q+ ++G+ LS +++ L R+ ++H V P+
Sbjct: 160 AWACDAAGRVDTVVRRLRMSARQMAQRYGEARLSRRVRRMLRRDPERSVPLVHMVRPRVR 219
Query: 221 ---SLTDKKKDKGNKGFHSKFVSV-----DENRFFEEKQIATFPYIVGRYRVRADEIYGR 272
K G G + + S+ E FP++ R+ V +IYGR
Sbjct: 220 RNAGEAGKTASGGLGGVNMPWQSLTWETEGAEGLLHEGGFEEFPHLAARWDVAGGDIYGR 279
Query: 273 SPAMEALPTIRRLNETVNELAQFGRLSLH----PPTIAVSEAKQRNFDLKPGYMNIGALS 328
SP M+ LP ++ L E+A+ L++H PP S KQR +L PG N
Sbjct: 280 SPGMDVLPDVKML----QEMARSQLLAIHKVVNPPMRVPSGFKQR-LNLIPGGQNY-VTP 333
Query: 329 REGRSLFQPVQFGNP--LPYHEELNRLKESIRSLFLLDLFQVL--DDKASRSAAESMEKT 384
+G S+ Q NP ++ ++ ++R F DLF + + +++ +AAE +E+
Sbjct: 334 GQGESVGPLYQI-NPDIGAVTHKMEDVRRAVREGFFNDLFLMFTAEGRSNITAAEVLERG 392
Query: 385 REKGAFVGPLIGGLQSEFIGAMISRELDI----LDSQGNLPECEGADNPPVSLLKVEYTS 440
EK +GP+I QSE + ++ R I PE G ++VEY S
Sbjct: 393 EEKLLMLGPVIERHQSELLDPLLERTYGILRRGGLLPPPPPELAGRS------MRVEYVS 446
Query: 441 PLFKYQQAESVASALQGVNTVVEL-GVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRD 499
L + Q+ + + + + V L GV P +D +D ++ PA ++R
Sbjct: 447 ALAQAQRVVTAQAIRRFASDVSALAGVA---PQVLDKVDFEQAVDELAAIAGVPARVVRS 503
Query: 500 TAEVEDIRQQR 510
AEV +R R
Sbjct: 504 DAEVATLRAAR 514
>gi|120601696|ref|YP_966096.1| hypothetical protein Dvul_0646 [Desulfovibrio vulgaris DP4]
gi|120561925|gb|ABM27669.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4]
Length = 569
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 208/491 (42%), Gaps = 56/491 (11%)
Query: 44 RMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDAR-SKKVREWCDQ 102
R+ D T + A L++ + +T P + W ++ L ED + R W D
Sbjct: 56 RIIDGTATRAVRILAAGMQGGLTSPARPW---------FRLRLADEDMEEAGPERRWLDV 106
Query: 103 VTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNV 162
V L+ +RS F + YT + FG+ Y EAD + +R+ + +
Sbjct: 107 VERRLYA--ALARSNFYAAVHGLYTELAAFGSADMYHEADP-----QRVMRFSCLACGDF 159
Query: 163 YMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPK-- 220
+ + VD+V R + Q+ ++G+ LS +++ L R+ ++H V P+
Sbjct: 160 AWACDAAGRVDTVVRRLRMSARQMAQRYGEARLSRRVRRMLRRDPERSVPLVHMVRPRVR 219
Query: 221 ---SLTDKKKDKGNKGFHSKFVSV-----DENRFFEEKQIATFPYIVGRYRVRADEIYGR 272
K G G + + S+ E FP++ R+ V +IYGR
Sbjct: 220 RNAGEAGKTASGGLGGVNMPWQSLTWETEGAEGLLHEGGFEEFPHLAARWDVAGGDIYGR 279
Query: 273 SPAMEALPTIRRLNETVNELAQFGRLSLH----PPTIAVSEAKQRNFDLKPGYMNIGALS 328
SP M+ LP ++ L E+A+ L++H PP S KQR +L PG N
Sbjct: 280 SPGMDVLPDVKML----QEMARSQLLAIHKVVNPPMRVPSGFKQR-LNLIPGGQNY-VTP 333
Query: 329 REGRSLFQPVQFGNP--LPYHEELNRLKESIRSLFLLDLFQVL--DDKASRSAAESMEKT 384
+G S+ Q NP ++ ++ ++R F DLF + + +++ +AAE +E+
Sbjct: 334 GQGESVGPLYQI-NPDIGAVTHKMEDVRRAVREGFFNDLFLMFTAEGRSNITAAEVLERG 392
Query: 385 REKGAFVGPLIGGLQSEFIGAMISRELDI----LDSQGNLPECEGADNPPVSLLKVEYTS 440
EK +GP+I QSE + ++ R I PE G ++VEY S
Sbjct: 393 EEKLLMLGPVIERHQSELLDPLLERTYGILRRGGLLPPPPPELAGRS------MRVEYVS 446
Query: 441 PLFKYQQAESVASALQGVNTVVEL-GVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRD 499
L + Q+ + + + + V L GV P +D +D ++ PA ++R
Sbjct: 447 ALAQAQRVVTAQAIRRFASDVSALAGVA---PQVLDKVDFEQAVDELAAIAGVPARVVRS 503
Query: 500 TAEVEDIRQQR 510
AEV +R R
Sbjct: 504 DAEVATLRAAR 514
>gi|209966578|ref|YP_002299493.1| hypothetical protein RC1_3320 [Rhodospirillum centenum SW]
gi|209960044|gb|ACJ00681.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 521
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 195/451 (43%), Gaps = 53/451 (11%)
Query: 59 SLLSSLITPPGQKWHGLAES--FSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRS 116
SLL+ L TPP +W GLA SA + L V ++ + L +RS
Sbjct: 86 SLLAQL-TPPWSRWAGLAPGPDLSAAERAL---------VAPLLERASADLQAHLDRSN- 134
Query: 117 GFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVY 176
F + VV GTGC +E G +R+ +VPL+++ + + +D+V+
Sbjct: 135 -FAVEAHQAFLDVVTGGTGCLLVEEA--PPGAPSALRFTAVPLADLVLEEGAEGRLDTVF 191
Query: 177 REFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHS 236
R T T+ Q+ +++G L ++ A + + R ++ AV P G +
Sbjct: 192 RRLTPTLAQLAARFGTDALPGALRRRAAADPDARAAVVEAVLPDP-------GGGACRWA 244
Query: 237 KFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFG 296
+ D E + A P+I R+ E+YGRSP M+ALP IR N+ V
Sbjct: 245 VALEDDPPVLLAEGRFAEPPFIAFRWMKAPGEVYGRSPVMKALPDIRTANKVVE------ 298
Query: 297 RLSLHPPTIAVSEAKQRNFD---------LKPGYMNIGALSREGRS-LFQPVQFGNPLPY 346
L L ++AV+ Q + D L PG + A+ G + L P +F
Sbjct: 299 -LVLKNASVAVTGIWQADDDGVLNPGTIRLVPGAIIPKAVGSAGLTPLASPGRFDV---S 354
Query: 347 HEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAM 406
L+ L+ IR L D + +A E +E++ E +G G LQSE + +
Sbjct: 355 QLVLDDLRAHIRHALLADRLGPVQGP-RMTATEVLERSAEMARMLGATYGRLQSELLVPL 413
Query: 407 ISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
+ R L +L +G +P+ AD L+ V+ SPL + QQ + L+ + +V LG
Sbjct: 414 VRRCLSLLRRRGAVPDL-AADG---RLVAVQILSPLARAQQRRDAEAVLRWLESVTGLGD 469
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTPAVLI 497
+ M +D + +RF A PA L+
Sbjct: 470 -----AAMRAVDLEACARFLADAAGVPAALL 495
>gi|239787361|emb|CAX83837.1| Head-to-tail joining protein [uncultured bacterium]
Length = 524
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 132/533 (24%), Positives = 214/533 (40%), Gaps = 83/533 (15%)
Query: 1 MNQRSAKDIQ----DRFNYLKNQRGELNYW---MEELTGFLYPYKNNAQL---------- 43
MN ++ D Q RF + +R N W +E F P + L
Sbjct: 1 MNGQNDPDAQRVVLKRFEKARERR---NVWEGHWQECYDFALPSRGGPLLSSQPGAKRTD 57
Query: 44 RMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQV 103
R++D T + +L++ L + +TPP +W GLA A +E + V E
Sbjct: 58 RLFDGTAPDCVDQLAASLLAQLTPPWAQWFGLA----AGPDLTPEEREVAAPVLEKAGAA 113
Query: 104 TDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVY 163
+ F RS F + Y +V GT E G R+ ++PL+ +
Sbjct: 114 LQSHF-----DRSNFAIEMHQCYLDLVTAGTASLLFEEA--PLGSASAFRFTAIPLAQLA 166
Query: 164 MSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPK--- 220
+ + + +D+ +R T+ I ++ L M + + RF ++ AV P+
Sbjct: 167 LEESVEGRLDTTFRSSEMTISAIRERFPKAQLPESMGRKSKDDADARFKVVEAVLPERHG 226
Query: 221 ----SLTDKKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAM 276
++ D + G + ++ E RF P+I R+ E+YGRSP M
Sbjct: 227 YAYHAILDGEGTGGAE-------TLAEGRF------EMSPFINFRWLKAPGEVYGRSPVM 273
Query: 277 EALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQ---------RNFDLKPGYMNIGAL 327
++LP I+ N+ V L L TIAV+ Q N L PG + A+
Sbjct: 274 KSLPDIKTANKVVE-------LVLKNATIAVTGIWQADDDGVLNPANIKLVPGTIIPKAV 326
Query: 328 SREGRS-LFQPVQFGNPLPYHEELNRLKESIRSLFLLD-LFQVLDDKASRSAAESMEKTR 385
G + L P +F L L++ I L D L Q+ D + +A E +E++
Sbjct: 327 GSAGLTPLETPGRFDI---SQLMLTDLRQRISHALLADRLGQI--DAPNMTATEVLERSA 381
Query: 386 EKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKY 445
E +G G LQSE + ++ R + IL +G +P D + L+ Y SPL
Sbjct: 382 EMARLLGATYGRLQSELLTPLVMRAVAILKRRGEIPGLS-IDGHQIELI---YKSPLANE 437
Query: 446 QQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIR 498
+ E + LQ + V+ G P +D +R+ A N PA L+R
Sbjct: 438 RGREDAKNTLQWLTAVMSFG-----PPANQVVDLGAAARWLAKALNVPAELLR 485
>gi|85059667|ref|YP_455369.1| hypothetical protein SG1689 [Sodalis glossinidius str. 'morsitans']
gi|84780187|dbj|BAE74964.1| hypothetical phage protein [Sodalis glossinidius str. 'morsitans']
Length = 517
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 131/530 (24%), Positives = 216/530 (40%), Gaps = 55/530 (10%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKN--------NAQ------LRMW 46
M++ + K I R + LK+ R E + YP + +AQ ++
Sbjct: 1 MDELAVKLIT-RADALKSHRQRHESVWSECYDYTYPLRGAGFSADVLDAQSAKSKVAKLL 59
Query: 47 DTTGSEACIKLSSLLSSLITPPGQKWHGL-AESFSAYQAFLYKEDARSKKVREWCDQVTD 105
D T +++ L+S L S +TP +W L ES L ED + W
Sbjct: 60 DGTATDSARMLASALMSGMTPANAQWLNLDCES-------LADED------KAWLSTCAT 106
Query: 106 TLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYM- 164
++ + G ++ VV G Y +DE E G + PLS Y+
Sbjct: 107 LVWENIHAANFDAEGYEENL--DVVCAGWFVLY----IDENREEGGYTFQQWPLSQCYVA 160
Query: 165 SVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTD 224
S +VD++YR + T +Q ++++G+ +S K++ A +++F +HA++P++
Sbjct: 161 STRKDGIVDTIYRCYQMTAEQAIAEFGEAGVSEKIRRAARDKPDDKFDFLHAIFPRTNYG 220
Query: 225 KKKDKGNK-GFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIR 283
F S V R E FP V R+ YG P +ALP +
Sbjct: 221 VNACLAKHLRFASFHVERQGKRIVRESGYHEFPVCVPRWMKIPGGAYGIGPVYDALPDCK 280
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP 343
LNET L++ I+ + + +K G I S +P+ G
Sbjct: 281 ELNETKRMEKAAQDLAISGMWISEDDGVINPYSVKVGPRRIIVASSVNS--MKPLLTGAD 338
Query: 344 --LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
+ + E +RL+ SIR + + D Q D A +A E + +GP+ G Q+E
Sbjct: 339 FQVAFTAE-DRLQASIRKIMMADQLQPQDGPA-MTATEVHVRVALIRQLLGPVYGRFQAE 396
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASALQG 457
++ ++ R I G P PP S+ V Y SPL + Q+ E V + +
Sbjct: 397 YLQPLVERCFGIAFRAGVFPP------PPDSMQTAHFNVLYISPLARAQKLEDVTAVERL 450
Query: 458 VNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIR 507
V +L + P +D +DTD +R A PA +IR A+V +R
Sbjct: 451 GANVAQLSQVS--PEVVDLVDTDEATRVVADALGVPAKVIRSAADVTSLR 498
>gi|262043408|ref|ZP_06016533.1| hypothetical protein HMPREF0484_3551 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039234|gb|EEW40380.1| hypothetical protein HMPREF0484_3551 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 515
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 185/475 (38%), Gaps = 50/475 (10%)
Query: 44 RMWDTTGSEACIKLSSLLSSLITPPGQKWHGL-AESFSAYQAFLYKEDARSKKVREWCDQ 102
R+ D T +++ L+S L S +TP +W L +ES +DA + W
Sbjct: 57 RLLDGTATDSARMLASALMSGMTPANAQWLNLDSESLP--------DDAAA-----WLS- 102
Query: 103 VTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNV 162
T + + F VV G Y +DE E G + PL+
Sbjct: 103 -TCATLVWENIHAANFDAEGYEANLDVVCAGWFALY----IDEDREEGGFSFQQWPLAQC 157
Query: 163 YM-SVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPK- 220
Y+ S +VD++YR + T +Q + ++G +S K+ A A+ +++F +H ++P+
Sbjct: 158 YVTSTRRDGIVDTIYRRYQLTAEQAIKEFGADKVSKKISDAAAKKPDDKFEFLHCIFPRE 217
Query: 221 SLTDKKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALP 280
+ + N F S V V E FP V R+ YG P +ALP
Sbjct: 218 NYVVNARLAKNLRFASYNVEVSGKLIVRESGYHEFPCCVPRWMKIPGTPYGIGPVYDALP 277
Query: 281 TIRRLNETVNELAQFGRLSLHPPTIAVSEA--KQRNFDLKPGYMNIGALSREGRSLFQPV 338
+ LNET L++ IA + R + P + + + L
Sbjct: 278 DCKELNETKRMEKAAQDLAIAGMWIAEDDGVLNPRTVKVGPRRIIVANSVDSMKPLLTGA 337
Query: 339 QFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGL 398
F E RL+ SIR + + D Q D A +A E + +GP+ G
Sbjct: 338 DFNVAFTAEE---RLQASIRKIMMADQLQPQDGPA-MTATEVHVRVALIRQLLGPVYGRF 393
Query: 399 QSEFIGAMISRELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASA 454
Q+E++ ++ R + G P P SL V Y SPL + QQ
Sbjct: 394 QAEYLQPLVERCFGLAFRAGVFPPA------PESLQNANFNVRYISPLARAQQ------- 440
Query: 455 LQGVNTVVELGVKTGD-----PSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
L+ V + LG + P D +DTD +R A PA +IR + VE
Sbjct: 441 LENVTAIERLGANVANLAQVSPDVTDLVDTDEATRVIADALGVPAKVIRSSDAVE 495
>gi|282848877|ref|ZP_06258267.1| hypothetical protein HMPREF1035_1386 [Veillonella parvula ATCC
17745]
gi|282581382|gb|EFB86775.1| hypothetical protein HMPREF1035_1386 [Veillonella parvula ATCC
17745]
Length = 575
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 207/478 (43%), Gaps = 50/478 (10%)
Query: 44 RMWDTTGSEACIKLSSLLSSLITPPGQKWHGLA-ESFSAYQAFLYKEDARSKKVREWCDQ 102
++ + E+C +S + S +TPP +KW L E+ A + +V E D+
Sbjct: 71 KILNPVAWESCQIFASGVMSGLTPPSRKWFKLTMENIDV---------AANSQVAELLDE 121
Query: 103 VTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNV 162
+ L+ ++S F + Y + G + AD E G+R+ S P+
Sbjct: 122 REEILYAVL--AKSNFYSVVHQVYMEL-PMGQAPMGIFADS-----ESGVRFTSYPIGTY 173
Query: 163 YMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNEN---ERFTIIHAVYP 219
+S N + +V+ R++ TVDQIV ++G + +K+ + N N + FT+ V P
Sbjct: 174 AISTNSKEIVNIFGRKYKMTVDQIVEQFGYENCPDNIKN-IYDNGNSLQQSFTVNWLVEP 232
Query: 220 KSLTDKKKDKGNKGFHSKF----VSVDENRF---FEEKQIATFPYIVGRYRVRADEIYGR 272
K + N + S + + DE + FEE +P + R+ YG+
Sbjct: 233 NKDRKDKLGRRNMPYSSIYWVEGSNSDEVLYHGGFEE-----WPIPIARHTSMDLNGYGK 287
Query: 273 SPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGR 332
A A P + L + + L + PP A S+ +L PG G EG+
Sbjct: 288 GAAWFAQPDSQMLQKLEFDYLTAVELGVKPPMQAPSDVIS-TVNLYPG----GITEIEGQ 342
Query: 333 SLFQP---VQFGNPLPYHEELNRLKESIRSLFLLDLFQVLD--DKASRSAAESMEKTREK 387
+P VQ N ++ ++SI+ + DLF +LD DK +A E ME+T+EK
Sbjct: 343 HKVEPMFAVQ-SNLQDIQNKIAVTEDSIKRAYSADLFLMLDQIDKGQMTAREVMERTQEK 401
Query: 388 GAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGA---DNPPVSLLKVEYTSPLFK 444
+GP++ L SEF+ +I R +LD G P E D +K+EY SPL +
Sbjct: 402 LQQLGPVVERLLSEFLNPIIERVYAVLDRAGVFPPVEDEELLDQLNGQEVKIEYISPLAQ 461
Query: 445 YQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAE 502
Q+ S+ + Q ++ L +P+ ++ + + + PA +IR E
Sbjct: 462 AQKMSSLVNIEQYFAFIMSLA--QANPNIVNKFNFEEAANTYGVNLGVPAKIIRSDDE 517
>gi|227355860|ref|ZP_03840253.1| tail protein [Proteus mirabilis ATCC 29906]
gi|227164179|gb|EEI49076.1| tail protein [Proteus mirabilis ATCC 29906]
Length = 554
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 196/437 (44%), Gaps = 44/437 (10%)
Query: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
+ S IT P + W LA + K E +Q + +F +RS
Sbjct: 72 MMSGITSPARPWFRLATPDPDLMDY-----GPVKLWLETTEQRMNEVF-----NRSNLYQ 121
Query: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
L Y + FGT + D + IR + PL + Y++ + VD YR+FT
Sbjct: 122 SLPLMYGDLGTFGTAAMAVVEDS-----QRIIRTVHFPLGSYYIANSPSLSVDVCYRKFT 176
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFT-IIHAVYPK-SLTDKKKDKGNKGFHSKF 238
TV Q+V ++G +S +KS ++ ++ ++HAVYP K + +K F S +
Sbjct: 177 MTVRQLVMEFGVDSVSDTVKSMWNSSQYSQWIEVVHAVYPNLERQTGKLEAKHKPFKSVY 236
Query: 239 VSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRRLNETVNELAQF 295
+ V D + E FP + R+ V +++YG S P M AL + L AQ
Sbjct: 237 LEVAGDHEKVLRESGYDEFPIMAPRWEVNGEDVYGSSCPGMLALGGTKALQLMQKRKAQM 296
Query: 296 GRLSLHPPTIAVSEAKQRNFDLKPG---YMNIGALSREGRSLF--QPVQFGNPLPYHEEL 350
+PP + K + + PG Y++ + + +++F QPV L E++
Sbjct: 297 IDKLTNPPLQVPASLKNQRVNTIPGGINYLDEANPTNKIQTIFDVQPVALKALL---EDV 353
Query: 351 NRLKESIRSLFLLDLFQVLDDKASRSAA-ESMEKTREKGAF-VGPLIGGLQSEFIGAMIS 408
++ I + + +DLF+++ +RS E++ + RE+ +GP++ L SE + +I+
Sbjct: 354 QDTRQLIDTAYFVDLFRMMQMVNTRSMPIEAVVEMREEKLLQLGPVLQRLDSELLDKLIN 413
Query: 409 RELDILDSQGNLP----ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVEL 464
R IL ++ LP E +G D LKVEY S + + Q++ V S + V L
Sbjct: 414 RTFSILVNKNLLPVAPDEMQGMD------LKVEYISVMAQAQKSIGVGSIERFAGFVGNL 467
Query: 465 G-VKTGDPSCMDHMDTD 480
VK P +D ++ D
Sbjct: 468 AKVK---PEALDKLNAD 481
>gi|23015763|ref|ZP_00055531.1| hypothetical protein Magn03010200 [Magnetospirillum magnetotacticum
MS-1]
Length = 543
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 193/475 (40%), Gaps = 61/475 (12%)
Query: 44 RMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQV 103
R++D T + +L++ L S +TPP +W GL +A E + + E V
Sbjct: 78 RLFDGTAPDCVDQLAASLLSELTPPWAQWFGLTAGDQMPEA----ERDQVAPLLERVAAV 133
Query: 104 TDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVY 163
+ F RS F + Y V GT E G R+ SVPL V
Sbjct: 134 MQSHF-----DRSNFAIEMHQCYLDAVTGGTASLLFEEAA--PGEASAFRFTSVPLGQVV 186
Query: 164 MSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLT 223
+ +D +R +V + +++ VLS + A A + + R ++ AV P
Sbjct: 187 LEEGPAGRLDVTFRRSEMSVAALKARFARAVLSGHLIKAAADDPDLRLGVVEAVIPV--- 243
Query: 224 DKKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIR 283
+G + + + ++ P++ R+ E+YGRSP M+ALP I+
Sbjct: 244 -----RGGYSYAAVLDDESSDVVLGRGSFSSSPFLNFRWLKAPGEVYGRSPVMKALPDIK 298
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQ---------RNFDLKPGYMNIGALSREG-RS 333
N+ V L L TIAV+ Q N L PG + A+ G +
Sbjct: 299 TANKVVE-------LVLKNATIAVTGIWQADDDGVLNPANIKLVPGTIIPKAVGSAGLQP 351
Query: 334 LFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRS--AAESMEKTREKGAFV 391
L P +F L+ L+ IR + D L AS S A E ++++ + +
Sbjct: 352 LTAPGRFDT---SQLVLDDLRGRIRHALMGD---KLSQPASPSLTATEVLQRSDDMARLL 405
Query: 392 GPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVS----LLKVEYTSPLFKYQQ 447
G G LQSE + +I R + IL +G + PP+S + ++Y SPL + Q
Sbjct: 406 GATYGRLQSELLTPLIMRAIHILRRRGEI--------PPLSVDGRVFDLQYRSPLAQNQG 457
Query: 448 AESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAE 502
+ L + + LG P+ + +D +R+ A N P+ L+R +E
Sbjct: 458 RRDARNVLSWLGALSSLG-----PAALATVDAAAAARWLGRAFNVPSELVRPASE 507
>gi|295096867|emb|CBK85957.1| Bacteriophage head to tail connecting protein [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 541
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 130/531 (24%), Positives = 214/531 (40%), Gaps = 57/531 (10%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKN--------NAQ------LRMW 46
M++ + K I+ R + LK R + E + YP + +AQ ++
Sbjct: 1 MDELAVKLIK-RSDTLKANRQQHESVWRECYDYTYPLRGAGFSDEVLDAQSAKHKVAKLL 59
Query: 47 DTTGSEACIKLSSLLSSLITPPGQKWHGL-AESFSAYQAFLYKEDARSKKVREWCDQVTD 105
D T +++ L+S L S +TP +W L +ES +DA++ W +
Sbjct: 60 DGTATDSARMLASALMSGMTPANAQWLNLDSESLP--------DDAKA-----WLSECAT 106
Query: 106 TLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYM- 164
++ + F VV G Y +DE E G + PL+ Y+
Sbjct: 107 LVW--ENIHAANFDAEGYEANLDVVCAGWFVLY----IDEDREEGGYTFQQWPLAQCYVT 160
Query: 165 SVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKS--L 222
S +VD++YR + T +Q + ++G +S K++ A + +++F +H ++P+ +
Sbjct: 161 STRKDGIVDTIYRRYQLTAEQAIKEFGADKVSEKIRDAAKKKADDKFDFLHCIFPRETYM 220
Query: 223 TDKKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
D + K N F S V V + E FP V R+ YG P +ALP
Sbjct: 221 VDARLAK-NMRFASYNVDVSNKQIVRESGYHEFPCCVPRWMKIPGGSYGIGPVYDALPDC 279
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEA--KQRNFDLKPGYMNIGALSREGRSLFQPVQF 340
+ LNET L++ IA + R + P + + + L F
Sbjct: 280 KELNETKRMEKAAQDLAISGMWIAEDDGVLNPRTVKVGPRRIIVANSVDSMKPLLTGSDF 339
Query: 341 GNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQS 400
E RL+ SIR + + D Q D A +A E + +GP+ G Q+
Sbjct: 340 SVAFTAEE---RLQASIRKIMMADQLQPQDGPA-MTATEVHVRVALIRQLLGPVYGRFQA 395
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESVASALQ 456
E++ ++ R I G PP SL V Y SPL + Q+ E V + +
Sbjct: 396 EYLQLLVVRCFGIAFRAGIFSP------PPESLQNANFNVRYISPLARAQKLEDVTAIER 449
Query: 457 GVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIR 507
V L + D +D +DTD +R A PA +IR + V D+R
Sbjct: 450 LGANVANLAGISQD--VVDLIDTDEATRVVADALGVPAKVIRSSDAVADLR 498
>gi|169795385|ref|YP_001713178.1| putative phage related protein [Acinetobacter baumannii AYE]
gi|169148312|emb|CAM86177.1| conserved hypothetical protein; putative phage related protein
[Acinetobacter baumannii AYE]
Length = 547
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 201/483 (41%), Gaps = 51/483 (10%)
Query: 45 MWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVT 104
+ D+T SEA L S + S TP W F A + + A +W D+V
Sbjct: 57 LLDSTLSEATQLLVSSIISGTTPANALW------FKAVPNGV-DDPAELTDGEKWLDEVC 109
Query: 105 DTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYM 164
F +R + + + V G G Y + D G G + + + Y+
Sbjct: 110 Q--FIWRNIHGANYDSEIFDLVLDCVVAGWGVMYADVDRHAGG---GYVFQTWDIGQCYL 164
Query: 165 SVNHQN-VVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLT 223
+ Q+ VD++YRE+ T+ +V+++G+ +S K+++ + + ++ V P+
Sbjct: 165 ASTRQDQKVDTLYREYEMTMAALVNEYGENKVSEKVRNTYKSKPDCKVKVLWVVEPRKTG 224
Query: 224 DKKKDK----GNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEAL 279
K D+ F S V VDE E FP+++ R+R +YG AL
Sbjct: 225 YIKGDRQLMPKEMPFASYHVEVDEKIILRETGYNEFPFVIPRFRKIPHSVYGTGQVSIAL 284
Query: 280 PTIRRLNETVNELAQFGRLSLHPPTIAVSEA--KQRNFDLKPGYM----NIGALSR--EG 331
P + N+ + + + +S V + R L G + ++ +L R +G
Sbjct: 285 PDAKTANKLMRDTLRSAEISTLGMYAGVDDGTFNPRTVRLGGGKIIVVNDVNSLKRIDDG 344
Query: 332 RSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFV 391
+ Q G L H L+ +IR + D Q D A +A E + +
Sbjct: 345 KGY----QVGVDLLAH-----LQGAIRKKMMADQLQPADGPAM-TATEVHVRVDLIRQQL 394
Query: 392 GPLIGGLQSEFIGAMISRELDILDSQGNL---PECEGADNPPVSLLKVEYTSPLFKYQQA 448
GPL G Q+E + ++ R + G + PE N L ++ S L + QQ
Sbjct: 395 GPLYGRWQAELLTPLLERTFGLAYRAGVIGEAPEEMQGRN-----LSFKFISALARSQQL 449
Query: 449 ESVASA---LQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVED 505
E V + LQG+++V EL DPS +D++D D V++ S P ++R +++
Sbjct: 450 EEVTAIERFLQGLSSVAEL-----DPSILDNVDMDAVAQVSGMGLGVPTAILRTQDQIDA 504
Query: 506 IRQ 508
IR+
Sbjct: 505 IRK 507
>gi|294648400|ref|ZP_06725899.1| phage protein [Acinetobacter haemolyticus ATCC 19194]
gi|292825705|gb|EFF84409.1| phage protein [Acinetobacter haemolyticus ATCC 19194]
Length = 558
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 114/497 (22%), Positives = 204/497 (41%), Gaps = 65/497 (13%)
Query: 38 KNNAQLRMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVR 97
+ A+ ++DTT E L S + S T P W +++ D S+
Sbjct: 51 RKQARTDLFDTTSVEGIQLLVSSIVSGTTSPVSIW---------FKSVPSGVDTPSQLTE 101
Query: 98 --EWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYI 155
+W QV F FR S F + F T +V G Y + + EKG G +
Sbjct: 102 GEQWLSQVDQ--FLFRNIHASNFDSEVTDFLTDLVVAGWAVLYADTN-REKG---GFTFN 155
Query: 156 SVPLSNVYMSVNHQN-VVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTII 214
+ + N Y+S N ++D++YREF + +QIVS++G +S K+++AL + +++FT++
Sbjct: 156 TWSIGNCYISSTQANGLIDTIYREFELSAEQIVSEFGIDNVSDKVRTALEKKPDQKFTLV 215
Query: 215 HAVYPKSLTDKKKDKGNKG--------FHSKFVSVDENRFFEEKQIATFPYIVGRYRVRA 266
A++P+ D K KG +G F S + +E FP +V R++
Sbjct: 216 QAIFPR---DSKLIKGEEGKRVSTSMPFASYTIEAQSKHILKESGFEEFPCVVSRFKKIP 272
Query: 267 DEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGA 326
D YG + + N+ + Q L+L IA Q + ++ P + I
Sbjct: 273 DSHYGLGMGSMVISDAKTANQIMKLSLQTAELNLGGLWIA-----QNDGNINPHTLRIRP 327
Query: 327 LSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFL-LDLFQVLDDKASR---------- 375
+ N + + + RL S+ L LD Q K R
Sbjct: 328 ---------NAIIAANTV---DSIKRLDTGSASVGLGLDFLQHFQAKIKRTLMSDQLTPQ 375
Query: 376 -----SAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPP 430
+A E + + +G + +QSE++ ++ R + G LP +
Sbjct: 376 GSSPLTATEIQARVQVYRNQLGSIFSRMQSEYLQVLLERTWGLAMRSGVLPPAP-EELMQ 434
Query: 431 VSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWAT 490
S + + +P+ Q+ E V +A+Q + V + D + MD+++ D + + A
Sbjct: 435 ASRISFNFINPMAASQKLEWV-TAIQNLMLNVSQMAQI-DQTVMDNLNLDAMVQVMADAL 492
Query: 491 NTPAVLIRDTAEVEDIR 507
+ P IR E+ ++R
Sbjct: 493 SVPVEAIRTDEEIAELR 509
>gi|293609619|ref|ZP_06691921.1| predicted protein [Acinetobacter sp. SH024]
gi|292828071|gb|EFF86434.1| predicted protein [Acinetobacter sp. SH024]
Length = 547
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 201/483 (41%), Gaps = 51/483 (10%)
Query: 45 MWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVT 104
+ D+T SEA L S + S TP W F A + + A + +W D+V
Sbjct: 57 LLDSTLSEATQLLVSSIISGTTPANALW------FKAVPNGV-DDPAELTEGEKWLDEVC 109
Query: 105 DTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYM 164
F +R + + + V G G Y + D G G + + + Y+
Sbjct: 110 Q--FIWRNIHGANYDSEIFDLVLDCVVAGWGVMYADVDRHAGG---GYVFQTWDIGQCYL 164
Query: 165 SVNHQN-VVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLT 223
+ Q+ VD++YRE+ T+ +V+++G+ +S K+++ + + ++ V P+
Sbjct: 165 ASTRQDQKVDTLYREYEMTMAALVNEYGENKVSEKVRNTYKSKPDCKVKVLWVVEPRKTG 224
Query: 224 DKKKDK----GNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEAL 279
K D+ F S V VDE E FP+++ R+R + +YG AL
Sbjct: 225 YIKGDRQLMPKEMPFASYHVEVDEKNVLRETGYNEFPFVIPRFRKIPNSVYGTGQVSIAL 284
Query: 280 PTIRRLNETVNELAQFGRLSLHPPTIAVSEA--KQRNFDLKPGYM----NIGALSR--EG 331
P + N+ + + + +S V + R L G + ++ +L R +G
Sbjct: 285 PDAKTANKLMRDTLRSAEISTLGMYAGVDDGTFNPRTVRLGGGKIIVVNDVNSLKRIDDG 344
Query: 332 RSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFV 391
+ Q G L H L+ +IR + D Q D A +A E + +
Sbjct: 345 KGY----QVGVDLLAH-----LQGAIRKKMMADQLQPADGPAM-TATEVHVRVDLIRQQL 394
Query: 392 GPLIGGLQSEFIGAMISRELDILDSQGNL---PECEGADNPPVSLLKVEYTSPLFKYQQA 448
GPL G Q+E + ++ R + G + PE N L ++ S L + QQ
Sbjct: 395 GPLYGRWQAELLTPLLERTFGLAYRAGVIGEAPEEMQGRN-----LSFKFISALARSQQL 449
Query: 449 ESVASA---LQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVED 505
E V + L G++ V ++ DPS +D++D D V++ S P ++R +++
Sbjct: 450 EEVTAIERFLAGMSNVAQI-----DPSILDNVDMDAVAQVSGMGLGVPTAILRTQDQIDA 504
Query: 506 IRQ 508
IR+
Sbjct: 505 IRK 507
>gi|332875224|ref|ZP_08443057.1| hypothetical protein HMPREF0022_02690 [Acinetobacter baumannii
6014059]
gi|332736668|gb|EGJ67662.1| hypothetical protein HMPREF0022_02690 [Acinetobacter baumannii
6014059]
Length = 547
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 201/483 (41%), Gaps = 51/483 (10%)
Query: 45 MWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVT 104
+ D+T SEA L S + S TP W F A + + A + +W D+V
Sbjct: 57 LLDSTLSEATQLLVSSIISGTTPANALW------FKAVPNGV-DDPAELTEGEKWLDEVC 109
Query: 105 DTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYM 164
F +R + + + V G G Y + D G G + + + Y+
Sbjct: 110 Q--FIWRNIHGANYDSEIFDLVLDCVVAGWGVMYADVDRHAGG---GYVFQTWDIGQCYL 164
Query: 165 SVNHQN-VVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLT 223
+ Q+ VD++YRE+ T+ +V+++G+ +S K+++ + + ++ V P+
Sbjct: 165 ASTRQDQKVDTLYREYEMTMAALVNEYGENKVSEKVRNTYKSKPDCKVKVLWVVEPRKTG 224
Query: 224 DKKKDK----GNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEAL 279
K D+ F S V VDE E FP+++ R+R + +YG AL
Sbjct: 225 YIKGDRQLMPKEMPFASYHVEVDEKIVLRETGYNEFPFVIPRFRKIPNSVYGTGQVSIAL 284
Query: 280 PTIRRLNETVNELAQFGRLSLHPPTIAVSEA--KQRNFDLKPGYM----NIGALSR--EG 331
P + N+ + + + +S V + R L G + ++ +L R +G
Sbjct: 285 PDAKTANKLMRDTLRSAEISTLGMYAGVDDGTFNPRTVRLGGGKIIVVNDVNSLKRIDDG 344
Query: 332 RSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFV 391
+ Q G L H L+ +IR + D Q D A +A E + +
Sbjct: 345 KGY----QVGVDLLAH-----LQGAIRKKMMADQLQPADGPAM-TATEVHVRVDLIRQQL 394
Query: 392 GPLIGGLQSEFIGAMISRELDILDSQGNL---PECEGADNPPVSLLKVEYTSPLFKYQQA 448
GPL G Q+E + ++ R + G + PE N L ++ S L + QQ
Sbjct: 395 GPLYGRWQAELLTPLLERTFGLAYRAGVIGEAPEEMQGRN-----LSFKFISALARSQQL 449
Query: 449 ESVASA---LQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVED 505
E V + L G++ V ++ DPS +D++D D V++ S P ++R +++
Sbjct: 450 EEVTAIERFLAGMSNVAQI-----DPSILDNVDMDAVAQVSGMGLGVPTAILRTQDQIDA 504
Query: 506 IRQ 508
IR+
Sbjct: 505 IRK 507
>gi|254251745|ref|ZP_04945063.1| hypothetical protein BDAG_00942 [Burkholderia dolosa AUO158]
gi|124894354|gb|EAY68234.1| hypothetical protein BDAG_00942 [Burkholderia dolosa AUO158]
Length = 539
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 120/512 (23%), Positives = 216/512 (42%), Gaps = 52/512 (10%)
Query: 45 MWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVT 104
++D+T ++A L + + S +TP W F + + W D +
Sbjct: 59 IFDSTATDAKRTLEASIMSGMTPANSLW------------FTMTVNGADDEGERWLDSAS 106
Query: 105 DTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYM 164
+ L+ + + F +V + G F + +DE G+ + P++ VY
Sbjct: 107 EVLW--QNIHSANFD---SEAADAVADGMAGWFALY--IDENRDAGGLYFEHWPMAGVYC 159
Query: 165 -SVNHQNVVDSVYREFTFTVDQIVSKW---GDKVLSSKMKSALARNENERFTIIHAVYPK 220
S VD V+R + T +Q V ++ GD + + A + E E + A+YP+
Sbjct: 160 ASSKPGGTVDIVFRCYQLTAEQCVREFNRRGDSLPQEIVDKAKNKPE-ELVDLCQAIYPR 218
Query: 221 SLTDKKKDKG-NKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEAL 279
+ + N S + ++ + E P +V R++ + +YG P ++AL
Sbjct: 219 DVHMVGALRAKNMPIASVTFACNQKQVIRESGYHEMPVVVARWKKIPNSVYGVGPLLDAL 278
Query: 280 PTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIG---ALSREGRSLFQ 336
P IR LN+ V ++ L L + ++E + L P + +G + +
Sbjct: 279 PDIRTLNDIVK--LEYANLDLAVSGMWIAE---DDGVLNPRTVKVGPRKVIVANSVDSMK 333
Query: 337 PVQFGNPLPYHE-ELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLI 395
P+Q + E + +L+ IR + D Q D A +A E + +GP+
Sbjct: 334 PLQPASNFQLAETRIEKLQGQIRKTLMADQLQPQDGPA-MTATEVHVRVDLIRQLLGPIY 392
Query: 396 GGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSL----LKVEYTSPLFKYQQAESV 451
G LQ+E++ +I+R + G P PP SL V+Y SPL + Q+ E V
Sbjct: 393 GRLQAEYLQPLIARCFGLAYRAGVFPP------PPDSLGGRNFSVQYQSPLARAQKLEEV 446
Query: 452 ASA--LQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQ 509
++ L G TV+ VK P +D++D D R + P ++R + +V RQQ
Sbjct: 447 SAIERLMGDVTVIA-QVK---PEALDNIDGDEAVRLTAKNLGVPDSIVRTSDQVTQYRQQ 502
Query: 510 REVQRRVMEEQHLQQQLQ-QTSQDIGAKAAGR 540
++ ++Q L ++Q + IG+ AA R
Sbjct: 503 KQAAAAQQQQQQLGMEVQGDVMKSIGSAAASR 534
>gi|54302247|ref|YP_132240.1| putative head-tail connector protein [Photobacterium profundum SS9]
gi|46915668|emb|CAG22440.1| hypothetical protein PBPRB0567 [Photobacterium profundum SS9]
Length = 552
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 192/460 (41%), Gaps = 42/460 (9%)
Query: 96 VREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYI 155
VR + D D + G + S F + S + ++ + E D +R+
Sbjct: 98 VRLYLDTCADLILGML--ASSNFYNVVPSMFMDLLTYSGSSVGFEKDP-----LTVMRFY 150
Query: 156 SVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFT-II 214
P+ + + + + V + R+ + V Q+V K+G +S +KSA + + T I
Sbjct: 151 PNPIGSYRLGIGPRQNVSTHGRKVEYRVSQVVEKFGLDNVSQSIKSAYRSGKYNQLTEIR 210
Query: 215 HAVY------PKSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADE 268
H V+ P++ + +K + + + D N F FP++ R+ V ++
Sbjct: 211 HLVFDNPDFVPRAFSAVRKPICSIWYDP---ADDRNPFLRRSGFDEFPFVTPRWEVIGND 267
Query: 269 IYGR-SPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGAL 327
YG P M AL +I+ L + + + L PP + S K L PG +
Sbjct: 268 TYGSFGPGMLALGSIKGLQKDQRDKYEAQDKMLKPPMVGPSSLKNNPRSLLPGAVTF-VD 326
Query: 328 SREGRSLFQPV-QFGNPLPYH-EELNRLKESIRSLFLLDLFQVLDD--KASRSAAESMEK 383
+++G+ F P Q PL Y E + + I S F DLF + D K++ +A E +
Sbjct: 327 NQQGQQGFTPAFQTNFPLNYQLESIRDTRAIIDSAFFKDLFLAVIDIGKSNTTATEIAAR 386
Query: 384 TREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSL----LKVEYT 439
EK +GP++ E + ++S ++ +G LPE PP L + +EY
Sbjct: 387 KEEKLLMLGPVLNRFNEEGLDPIVSASFYEMNRRGMLPE------PPPELDGVDVNIEYV 440
Query: 440 SPLFKYQQAESVASALQGVNTVVEL-GVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIR 498
L + Q+A ++S + V + L GV+ +D +D D V T T ++
Sbjct: 441 GLLQQAQKAVGISSIERTVGFIGNLAGVRQ---DVLDKVDFDSVVDIYTDITGTTPRILF 497
Query: 499 DTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAA 538
+ +V+ R R+ ++Q Q GA+AA
Sbjct: 498 NEQQVKATRDA-----RIQQQQREQMAAMAAPAKDGAEAA 532
>gi|167032756|ref|YP_001667987.1| putative tail protein [Pseudomonas putida GB-1]
gi|166859244|gb|ABY97651.1| putative tail protein [Pseudomonas putida GB-1]
Length = 564
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 112/535 (20%), Positives = 211/535 (39%), Gaps = 59/535 (11%)
Query: 10 QDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQL-----------RMWDTTGSEACIKLS 58
+ R + LK +R + +E++ F+ P ++ ++ + + A +
Sbjct: 11 EKRLSALKTERSSWDTNAKEISDFILPMRSRVMCDDTNRGDRRNNKIINNRATMASRTTA 70
Query: 59 SLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREW---CDQVTDTLFGFRERSR 115
S + S IT P + W LA A F V+ W C Q +F R
Sbjct: 71 SGMMSGITSPARPWFNLAPVARAIMEF--------GPVKSWFYECTQRMRDVF-----LR 117
Query: 116 SGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSV 175
S L + Y + FGTGC +++ D IR + Y+S ++
Sbjct: 118 SNLYQVLPTCYQEMATFGTGCIWVDEHPDTV-----IRCEAFTWGEYYISNGADGRAAAI 172
Query: 176 YREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFH 235
YREF +TV+Q+V ++G + LS K+ N ++F ++ G++
Sbjct: 173 YREFKWTVNQLVQEFGVEALSPSSKALYENNNGDQFISCAQRVELNMNANPDRAGSRNLP 232
Query: 236 SKFVSVDE----NRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNE 291
++ + + E++ FP + R+ + YG P L ++ L +
Sbjct: 233 FSALTWEAGAPGDMVLEDRGYHEFPAMAVRWESMPGDAYGTGPGRICLGDVKALQLYERQ 292
Query: 292 LAQFGRLSLHPPTIAVSEAKQRNFDLKPG---YMNIGALSREGRSLFQPVQFGNPLPYHE 348
A+ +PP A E K + PG Y+ + + ++QP P
Sbjct: 293 AARMTETGANPPLQAPVELKGQPSSTIPGGVTYVPMVGGQNQMAPIYQP-NAAWLSPIQA 351
Query: 349 ELNRLKESIRSLFLLDLFQVLDD-KASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
++ + I F +DLF ++ R+A E + EK +GP++ + E + +I
Sbjct: 352 KIQEHEGRINEAFFVDLFLMVSQLDTVRTATEIAARKEEKMLMLGPVLERINDELLDPLI 411
Query: 408 SRELDILDSQGNLPECEGADNPPV-------------SLLKVEYTSPLFKYQQAESVASA 454
R +I+ Q ++P G + S ++ EY S L + Q++++V
Sbjct: 412 DRTFNIMLRQ-SIPIWAGIIDGDPLLPPPPEELINANSEIQAEYVSILAQAQKSQNVL-G 469
Query: 455 LQGVNTVVELGVKTGD-PSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQ 508
L+ T+ G +G P +D +++D++ A ++R EV IR+
Sbjct: 470 LERFATLA--GNLSGAFPEVLDKVNSDQLIEEYADAIGVIPTVVRGADEVAAIRE 522
>gi|291334523|gb|ADD94176.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1201]
gi|291334657|gb|ADD94304.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C695]
gi|291334711|gb|ADD94357.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C890]
gi|291336437|gb|ADD95992.1| hypothetical protein [uncultured organism MedDCM-OCT-S04-C1073]
Length = 193
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 8/187 (4%)
Query: 138 YMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSS 197
++E D DE L+ R+I+ ++++ N + +D+V+R+F+ + ++ K+GD +S
Sbjct: 2 FIEED-DEDILKFSTRHIN----EIFIAENDKGRIDTVFRKFSLSARAVMQKFGD--VSI 54
Query: 198 KMKSALARNENERFTIIHAVYPKSLTD-KKKDKGNKGFHSKFVSVDENRFFEEKQIATFP 256
+ + ++ E I+HAVYP+S D +K+DK N F S ++ + FP
Sbjct: 55 NIATKAKKDPYEEVEIMHAVYPRSDFDPRKQDKENMPFESVYLDAESGDELSVSGFREFP 114
Query: 257 YIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFD 316
++V RY + EIYGRSPAM ALP ++ LNE + + + PP + +
Sbjct: 115 FVVPRYLKASHEIYGRSPAMTALPDVKMLNEMSKTTIKSAQKQVDPPLLVPDDGFMLPVR 174
Query: 317 LKPGYMN 323
PG +N
Sbjct: 175 TIPGGLN 181
>gi|48696640|ref|YP_024419.1| hypothetical protein VP2p04 [Vibrio phage VP2]
gi|48696684|ref|YP_024978.1| hypothetical protein VP5_gp03 [Vibrio phage VP5]
gi|40806147|gb|AAR92065.1| hypothetical protein [Vibrio phage VP5]
gi|40950038|gb|AAR97629.1| hypothetical protein [Vibrio phage VP2]
Length = 547
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 123/545 (22%), Positives = 214/545 (39%), Gaps = 80/545 (14%)
Query: 9 IQDRFNYLKNQRGELNYWMEELTGFLYPYKN--------------NAQLRMWDTTGSEAC 54
I R ++LK R + + + ++ P ++ N ++D+T +
Sbjct: 6 IVKRLDFLKTDRKNVEQIWDCIRKYIMPMRSDFFSDLRSEGSINWNQNREVFDSTAGDGL 65
Query: 55 IKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERS 114
LSS L +T P KW LA F KE + R+W + T ++ + S
Sbjct: 66 ETLSSSLHGSLTSPATKWFELA--------FRDKELNSDDECRKWLENATHDVYSALQDS 117
Query: 115 RSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDS 174
F Y + +G E D DE+G + + S P+ + Y + + V +
Sbjct: 118 --NFNLEANETYIDLCGYGNAIMVEEEDEDEEG---SVVFQSSPIQDSYFEEDSRGQVVN 172
Query: 175 VYREFTFTVDQIVSKWGDK------VLSSKMKSALARNENERFTIIHAVYPKSLTDKKKD 228
YR F +T QI ++GD+ + +K S A + E + Y DKK++
Sbjct: 173 FYRVFRWTPAQIYDRFGDEGTPEAIIKKAKEASNQAALKQEVVMCVFTRY-----DKKQN 227
Query: 229 KG--------NKGFHSKFVSVDEN-RFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEAL 279
+ + F K++ + + EE P R+R A +G P+ AL
Sbjct: 228 RNAGTVLAPTERPFGKKWILKEGAVQLGEEGGYYEMPAYAIRWRKSAGSQWGFGPSHLAL 287
Query: 280 PTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQ 339
P + N V EL + P I V+E G ++ L G ++ + ++
Sbjct: 288 PDVLTANRYV-ELVLRSSEKVIDPAIMVTER---------GLISDIDLGASGLTVVRDME 337
Query: 340 FGNPLPYHE-------ELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVG 392
P +L L+ ++R ++ +D Q + D + +A E + +G
Sbjct: 338 SMKPFESRARFDVSSIQLTDLRSAVRRIYYVDQLQ-MKDSPAMTATEVQVRYELMQRLLG 396
Query: 393 PLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLK-------VEYTSPLFKY 445
P +G L+++F+ MI R +I G L E P LL+ + YT PL +
Sbjct: 397 PTLGRLENDFLSPMIQRTFNIRFRAGKLGEL------PSKLLESGKAAMDIVYTGPLSRA 450
Query: 446 QQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVED 505
Q+ + AS + + +L +P +D D D + R P L+R A+V
Sbjct: 451 QKIDQAASIERWAGSTAQLA--EINPEVLDIPDWDEMVRMLGSLLGAPQTLMRPKAKVTS 508
Query: 506 IRQQR 510
IR+ R
Sbjct: 509 IRKNR 513
>gi|260557979|ref|ZP_05830191.1| Bbp21 [Acinetobacter baumannii ATCC 19606]
gi|260408489|gb|EEX01795.1| Bbp21 [Acinetobacter baumannii ATCC 19606]
Length = 555
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/463 (22%), Positives = 189/463 (40%), Gaps = 43/463 (9%)
Query: 37 YKNNAQLRMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKV 96
+ +A ++ D TG ++ L++ + S P +KW L + + Q + +V
Sbjct: 41 HDRSAWSKIVDNTGKDSLKTLAAGMVSGTCSPSRKWFTLQAADESLQ--------KDIEV 92
Query: 97 REWCDQVTDTLF-GFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYI 155
R+W V D + F S+S + Y FG G A E G + +
Sbjct: 93 RQWLKAVEDACYVAF---SKSNVYRTVHHIYMQEGAFGIGA----ALAPEHGRNSKAQLM 145
Query: 156 S-VPLS--NVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALA-RNENERF 211
+PL+ ++ + N + VYR+F T +V +G +S +K+A +N + F
Sbjct: 146 DLIPLTFGEFAITTDEFNKPNGVYRKFKLTSINMVKYFGLDNVSDAIKNAFENKNYEQEF 205
Query: 212 TIIHAVYPKSLTDKKKDKGNKGFHSKFVS-VDENRFFEEKQIATFPYIVGRYRVRADEIY 270
+ HA+Y + + K N F S + ++ E + F I GR+ V + ++Y
Sbjct: 206 EVCHAIYER-VDAKGYGPKNMPFASIYYEPSSSDKLLRESGLMGFQVICGRWTVSSSDVY 264
Query: 271 GRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSRE 330
G PA + + +R L + ++A + PP + K + P G +
Sbjct: 265 GEGPASDCIGDLRALQKGHQQIAVGVDYQVRPPLLLPDYLKGHERETLPN----GIAFYQ 320
Query: 331 GRSLFQPVQFGNPLPYHEELN-------RLKESIRSLFLLDLFQVLD--DKASRSAAESM 381
Q Q L +LN + +E ++ F DLF +LD DK +A E
Sbjct: 321 ASPTSQVAQVQAMLNVQFDLNGVMAQIAQCQERVKRAFHTDLFMMLDAFDKGKMTATEVY 380
Query: 382 EKTREKGAFVGPLIGGLQSEFIGAMISRELD-ILDSQGNLPEC--EGADNPPVSLLKVEY 438
E+ EK +GP++ E + ++ ++ +L + L + E N V + V
Sbjct: 381 ERKSEKMLMLGPVVERQIDELLRPLVEICVERVLANSEYLRQIAPEAIQNADVEINFVSI 440
Query: 439 TSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDR 481
+ K + + AL + V ++ DP +D +DTD+
Sbjct: 441 LALAQKSSGSAILERALAMIGQVAQV-----DPQVLDKVDTDK 478
>gi|296537022|ref|ZP_06899017.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296262651|gb|EFH09281.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 368
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 142/350 (40%), Gaps = 33/350 (9%)
Query: 115 RSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDS 174
RS F + + +V GTG +E G +R+ +VPL + +D+
Sbjct: 36 RSNFAVEMHQAFLDLVVAGTGVLLVEEA--PPGALSALRFTAVPLREAVLEEGESGRLDT 93
Query: 175 VYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGF 234
+YR I +++ VL + + E R ++ AV+P ++G +
Sbjct: 94 IYRAMALEAAAIAARYPGAVLPPGLGAGSPAQEAPRHRVVEAVWP--------ERGGSAY 145
Query: 235 HSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQ 294
+ E + P+I R+ E YGR P M+ALP IR N+ V
Sbjct: 146 LAVLEHDGRAWPLAEGRFQDSPFIAFRWLKAPGEAYGRGPVMKALPDIRTANKVVE---- 201
Query: 295 FGRLSLHPPTIAVSEAKQRNFD--LKPGYMNI--GAL--SREGRSLFQPVQF-GNPLPYH 347
L L +IA + Q D L P + + GA+ G S P+ GN
Sbjct: 202 ---LVLKNASIAATGIWQAEDDGVLNPATVRLVPGAIIPKAPGSSGLTPLAAPGNFDVSQ 258
Query: 348 EELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
L+ L+ IR+ L D A+ +A E +E++ + +G G LQ+E + +I
Sbjct: 259 LVLDDLRGRIRAALLADRLGP-PGTAAMTATEVLERSAQTARLLGATYGRLQAELLTPLI 317
Query: 408 SRELDILDSQGNLPE--CEGADNPPVSLLKVEYTSPLFKYQQAESVASAL 455
R L IL +G +P +G + ++ Y SPL + Q A+ L
Sbjct: 318 GRCLSILRRRGEVPPLLLDGREA------RLTYHSPLARVQGRSDAANTL 361
>gi|292670769|ref|ZP_06604195.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292647390|gb|EFF65362.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 567
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 113/485 (23%), Positives = 190/485 (39%), Gaps = 64/485 (13%)
Query: 45 MWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVT 104
+ D EA K ++ L S +T P + W L KE A V+ W ++
Sbjct: 69 LLDPYPMEASGKCAAGLHSGLTSPSRPWFALG--------LQDKELAEYHTVKLWLEECQ 120
Query: 105 DTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYM 164
D L G ++S L + + +FGTG + D + G+
Sbjct: 121 DVLMGIY--AKSNIYNMLLNIEAELTQFGTGAALLLEDFNT-----GVWARPYTCGEYAG 173
Query: 165 SVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSAL-ARNENERFTIIHAVYPKSLT 223
+V+ + V R+F Q+V ++G+ V+S +++A A+N + F + L
Sbjct: 174 NVDARGRVVQFARKFKLNAWQMVDEFGEDVVSDAVRNAYRAKNLKDYFPVTM------LI 227
Query: 224 DKKKD---KGNKGFHSKFVSVDENRFFEEKQIATF---------PYIVGRYRVRADEIYG 271
+K D N + K+ S +FE+ Q F P+++ R+ V A+ IYG
Sbjct: 228 EKNADYNPDSNALLNFKYKSY----YFEDSQTDVFLKVSGYHEVPFLMPRWTVIANGIYG 283
Query: 272 RSPAMEALPTIRRLN--ETVNELAQFGRLSLH---PPTIAVSEAKQRNF-----DLKPGY 321
P AL +L E +N RL H P I S + N L P
Sbjct: 284 VGPGHNALGNCMQLQKIEKINM-----RLLEHRSDPALIVPSSVGKVNRLPGKETLVPDS 338
Query: 322 MNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVL--DDKASRSAAE 379
M G R L++ G+ + + ++ I + F DLF +L D +A E
Sbjct: 339 MINGI-----RPLYEAT--GDRGEVMQTIQYKQQQIGAAFYNDLFVMLAQQDNPQMTARE 391
Query: 380 SMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYT 439
E+ EK + P++ + +E + + R +I G LP +K E+
Sbjct: 392 VAERHEEKLLMLSPVLEQMHNEVLAPLTRRAFEICYRNGLLPPLPEELRGQEGSIKAEFI 451
Query: 440 SPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRD 499
S L + Q+A V + + + P MD++D D R + TP ++RD
Sbjct: 452 SLLAQAQKA--VGTNAMEKTLAIAGNLMGASPEIMDNLDLDAAIREHAQMSGTPETIMRD 509
Query: 500 TAEVE 504
+V+
Sbjct: 510 EQDVQ 514
>gi|325971684|ref|YP_004247875.1| hypothetical protein SpiBuddy_1857 [Spirochaeta sp. Buddy]
gi|324026922|gb|ADY13681.1| hypothetical protein SpiBuddy_1857 [Spirochaeta sp. Buddy]
Length = 571
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 152/371 (40%), Gaps = 37/371 (9%)
Query: 161 NVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPK 220
+ ++ N +D+++ FT T + ++ DK + ++ + + A+YP+
Sbjct: 183 DFWIDKNANGKIDTIFIRFTMTSADALDRFKDKTPPNILRDVETDAGHNEHEFVLAIYPR 242
Query: 221 SLTDKKKDKGNKGFHSKFVSVD----ENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAM 276
+K K F +V E+ EE FP V + YG M
Sbjct: 243 KKLRSEKGKVLISTEKPFAAVTYYPVEDCIVEESGYDDFPVAVHVFEQDGTSAYGMGLVM 302
Query: 277 EALPTIRRLN-------ETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSR 329
+ L ++RLN ETV ++A+ P +++ E+ + F PG N
Sbjct: 303 KYLTELKRLNSMSRDHLETVQKVAK--------PPMSIPESLKGRFSGDPGARNYMGNMD 354
Query: 330 EGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVL--DDKASRSAAESMEKTREK 387
+ Q VQ L +E+ L+E I LF DLF L DK +A ++ E+
Sbjct: 355 AKPEIIQTVQDIGWL--SQEITELEEKIGRLFFNDLFNYLMRQDKV-LTATQTQAIKSEE 411
Query: 388 GAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKV-------EYTS 440
A + ++G Q I ++ R I+ LP+ PP LL++ +
Sbjct: 412 LALLASILGTTQYMKINPIVKRVFRIMVKGNRLPK------PPKELLRIKNALMRIDLDG 465
Query: 441 PLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDT 500
PL K + ++ LQ ++ + +D+++TD R + A P ++R+
Sbjct: 466 PLAKNVKMFAMQDGLQASLEWMQALHAMQMTNTLDNINTDIFVRKAFIAAGMPQSVLREL 525
Query: 501 AEVEDIRQQRE 511
EVE +R+Q++
Sbjct: 526 GEVEQMRKQKQ 536
>gi|46580131|ref|YP_010939.1| hypothetical protein DVU1721 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46449547|gb|AAS96198.1| hypothetical protein DVU_1721 [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233876|gb|ADP86730.1| hypothetical protein Deval_1575 [Desulfovibrio vulgaris RCH1]
Length = 550
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 109/484 (22%), Positives = 191/484 (39%), Gaps = 67/484 (13%)
Query: 96 VREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEF-GTGCFYMEADVDEKGLEEGIRY 154
R W D V ++ S G Q+ + +EF G + D + L R+
Sbjct: 100 ARAWLDTVEASI-----NSVLRACGFYQAIHACNMEFLAFGPLLLFQDNSQGAL---CRF 151
Query: 155 ISVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTII 214
S + ++++ +D+V R T Q+ ++G L+ L N+ +
Sbjct: 152 ESCTVGTWAVALDADGGLDTVVRRLKLTARQMEQRFGRDRLTPATVKLLETNKGHERVEV 211
Query: 215 HAVY-PKSLTDKKK-DKGNKGFHS-KFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYG 271
V P++ + D N F S + + + E PY Y D +YG
Sbjct: 212 VHVVRPRTERQHGRIDARNMPFASYMYEATGADDVLSESGYHEMPYFFAAYDDTLD-LYG 270
Query: 272 RSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREG 331
+P + LP +++L E + + ++PPT + KQR ++ PG N
Sbjct: 271 SAPGDDCLPDVKQLQELEKQKLVGLQKVINPPTRKPASFKQR-LNVNPGGENA------- 322
Query: 332 RSLFQPVQFGNPL---PYHE---ELNRLKESIRSL-----------FLLDLFQVLDDKAS 374
V G+P P +E +LN+++E I ++ + D+ L K
Sbjct: 323 ------VSGGDPHGIGPLYEVRIDLNQVREEIATVVDRIRQTTMASYFADMPLELRPK-D 375
Query: 375 RSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPP---- 430
+ E +E+ RE+ +GP + +++ + +I R +LD G LP PP
Sbjct: 376 MTYGEYLERKRERLQLMGPSLEAYEAKVLTPVIFRTFALLDRAGMLPP------PPDALG 429
Query: 431 -VSLLKVEYTSPL---FKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFS 486
V+++ + Y SPL + AES + L V + E DP +D +D D+
Sbjct: 430 EVAVVDISYISPLAQALRQTGAESTRALLMDVMQLAE-----ADPGVLDKVDMDQAVDEL 484
Query: 487 LWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKL 546
P ++R +V +RQQR+ + + E Q Q+ Q + A R L
Sbjct: 485 AKGIGAPGRVVRSDEDVAAMRQQRD-EAKAREAQ--AQEAITAMQGLAKVAGTRTGPGTL 541
Query: 547 THDM 550
HD+
Sbjct: 542 AHDL 545
>gi|119386466|ref|YP_917521.1| putative head-tail connector protein [Paracoccus denitrificans
PD1222]
gi|119377061|gb|ABL71825.1| putative head-tail connector protein [Paracoccus denitrificans
PD1222]
Length = 558
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 109/477 (22%), Positives = 187/477 (39%), Gaps = 52/477 (10%)
Query: 44 RMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQV 103
R+ D T A L + L S +T P + W L S D +V++W +V
Sbjct: 59 RILDNTAQMALRTLRAGLMSGVTSPSRPWFRLGLRGST-------ADEAEFEVKDWLHEV 111
Query: 104 TDTLFGFRERSR-SGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNV 162
++ E R S L + Y + +GT + D E+ +R ++ +
Sbjct: 112 QRRMY---EVMRGSNIYRMLDTTYGDLGLYGTAANLVVPD-----FEDVVRGHNLQVGRF 163
Query: 163 YMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNEN-ERFTIIHAVYPKS 221
+ + V ++YRE V IV WG +S ++ A E + FTI H + ++
Sbjct: 164 RLGEDGNGRVIALYRELKMPVRGIVETWGLDAVSQSVRRAWDTGEYYQTFTICHMIDKRA 223
Query: 222 LTDKKK-DKGNKGFHSKFVSVD--ENRFFEEKQIATFPYIVGRY-RVRADEIYGRSPAME 277
D K + + S + +D +F + P + R+ +V + SP M
Sbjct: 224 DGDPKAMQSSGRPWASIYWEMDAPSGQFLQIGGHRVKPLLAPRWEQVEGEAWSASSPGMV 283
Query: 278 ALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQP 337
AL R L + + A + +PP I + F PG A Q
Sbjct: 284 ALGDARSLQVSQEQKAIAIQKMHNPPLIGGAVQGGMFFKNVPGGFTAMAT--------QD 335
Query: 338 VQFGNPLPYHE----------ELNRLKESIRSLFLLDLFQV----LDDKASRSAAESMEK 383
+ G P +E ++ + + F DLFQ+ LD ++ +A E E+
Sbjct: 336 LSTGGIRPAYEVRPDIQGLIIDIQESQRRVEVAFYKDLFQMTALALDGRSQITAREIAER 395
Query: 384 TREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPEC-EGADNPPVSLLKVEYTSPL 442
EK +GP++ L E + +I + LPE EG P+ KVEY S L
Sbjct: 396 HEEKLMALGPVLESLDHELLQPLIEATFAYMQEADILPEAPEGIVGNPI---KVEYISLL 452
Query: 443 FKYQQAESVASALQGVNTVVELG-VKTGDPSCMDHMDTDRVSR-FSLWATNTPAVLI 497
+ Q+A + + + + L +K P +D +D +++ R F+ P +L+
Sbjct: 453 AQAQKAIGIGAIERTIGFAGTLAQIK---PDVIDMIDGEQMMREFADQVGGPPGILL 506
>gi|303327895|ref|ZP_07358334.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
gi|302861721|gb|EFL84656.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
Length = 554
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 105/522 (20%), Positives = 200/522 (38%), Gaps = 64/522 (12%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYPYK------NNAQLR---MWDTTGSEACIKL 57
K+++ +L++ R + EL + P + + LR +++ + A K
Sbjct: 9 KEVKQLVGHLESLRAKRLAQQRELGRLILPSRGLFQGEDTESLRESNLFNPAANRALRKA 68
Query: 58 SSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSG 117
++ ++ ITP G W AFL + D + E+ D V + L S G
Sbjct: 69 AAGMTQAITPAGNPWF--------KHAFLLRRDREATGGNEYVDTVDNMLRTVL--SAGG 118
Query: 118 FVGCLQSFYTSVVEFGT---GCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDS 174
F + SF ++ FG GC E+ RY +++ +D+
Sbjct: 119 FYRAIHSFNKELLGFGCALLGC--------EESPRTVARYFCQTCGTYCAALDEDGNLDA 170
Query: 175 VYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTD-KKKDKGNKG 233
V R T ++ ++G+ LS + L ++ + + H V ++ D ++ D+ N
Sbjct: 171 VARRLLMTPRELARRFGEDRLSDVSRQKLKKDSYDPVAVRHVVQRRTARDPERADRSNMP 230
Query: 234 FHSKFVSVDENRFFEEKQIATFPYIVGRYRV---------RADEIYGRSPAMEALPTIRR 284
+ S ++EE A F VG +R A +YG P EAL +
Sbjct: 231 WGSW--------WYEEGGAADF-LDVGGFRSMPFFFTVWEEARGVYGTGPGDEALADQKG 281
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPG-YMNIGALSREGRSLFQPVQFGNP 343
+ E G + P + + D PG + G + V FG
Sbjct: 282 I-EGWELRKAVGVEKMIDPVLVSQGPLKAYVDTSPGAVIPSGGFGADSLKPLYEVNFGPA 340
Query: 344 LPY-HEELNRLKESIRSLFLLDLFQVLD---DKASRSAAESMEKTREKGAFVGPLIGGLQ 399
+ + EE++++ + + + ++F + A + E M++ R +GP + G +
Sbjct: 341 VQHVQEEISQISLRLEDVMMANIFASMSLETRPAGMTMTEYMDRRRRSAELMGPTVSGYE 400
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFK-YQQAESVASALQGV 458
+ ++ +L+ G LP +P S L V Y SP+ + +Q+ +VA +
Sbjct: 401 PRILSPVLENTFGLLEEYGLLPGPPDGLSPFAS-LNVSYQSPMAQMLEQSGAVA-----I 454
Query: 459 NTVVELGVKT--GDPSCMDHMDTDRVSRFSLWATNTPAVLIR 498
++ EL P D +D ++ PA ++R
Sbjct: 455 QSLFELAAPMLRAVPDLADKIDFEQAIDELAQRLGVPASVVR 496
>gi|13186164|emb|CAC33475.1| hypothetical protein [Legionella pneumophila]
Length = 519
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 169/406 (41%), Gaps = 47/406 (11%)
Query: 30 LTGFLYPYKN-NAQLRMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYK 88
L GFL P + NA + +D T A +L+ + + P GQ+W F+ F
Sbjct: 70 LAGFLTPGQQYNADI--YDLTLPIAHKRLADKMLMNMVPQGQQWV----KFTPGDEFGEP 123
Query: 89 EDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSV------VEFGTGCFYMEAD 142
++ + ++TD F +RS +FY +V V TG
Sbjct: 124 GTPLYQRALDATQRMTDHFFKIIDRS---------NFYLAVGESLQDVLISTGII----A 170
Query: 143 VDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYRE-FTFTVDQIVSKWGDKVLSSKMKS 201
++E + +RY +VP + V + + VD+++R+ + ++ I S W ++
Sbjct: 171 INEGNRKRPVRYEAVPPAQVMFQGDAEGQVDAIFRDWYQVRIENIKSMWPKAEVAK---- 226
Query: 202 ALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGR 261
L + ++ I + +K+ + V E+ +++P++V R
Sbjct: 227 -LNKKPEDKVDIWECAWIDYEAPEKER------YQYVVMTSSKDVLLEQSNSSWPWVVYR 279
Query: 262 YRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEA--KQRNFDLKP 319
R EI GR P++ A PT +N+ + + +P +A S++ Q+ F +P
Sbjct: 280 MRRLTGEIRGRGPSLSAYPTAATINQALEDELVAAAFQANPMYMAASDSAFNQQTFTPRP 339
Query: 320 GYMNIGALSREGRSLFQPVQFGNPLPYHEEL-NRLKESIRS-LFLLDLFQVLDDKASRSA 377
G + + +G +P + + ++ L N ++ I L+ L V + +R+A
Sbjct: 340 GSI-VPVQMVQGEWPIKPFEQSGNIQFNALLVNDFRQQINELLYAFPLGAV--NSPTRTA 396
Query: 378 AESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPEC 423
E+ + E ++ LQ+EF +I R L +++ LPE
Sbjct: 397 TEAEIRYTENLESFSAMVPRLQNEFFIPVIQRTLWVINKV--LPET 440
>gi|253583086|ref|ZP_04860294.1| predicted protein [Fusobacterium varium ATCC 27725]
gi|251834978|gb|EES63531.1| predicted protein [Fusobacterium varium ATCC 27725]
Length = 517
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 22/254 (8%)
Query: 131 EFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYR-EFTFTVDQIVSK 189
E GTGC+ E EK R+ VPL+ + + + Q+ + V+R F +++ I S
Sbjct: 142 ELGTGCWKYEEQNSEKV---PFRHQYVPLNELLFNEDLQHRPNIVFRYNFKYSLWDIRSL 198
Query: 190 WGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDE--NRFF 247
+ LS NENE T+I V P + TD +++ DE +
Sbjct: 199 YKKADLSC----YDGINENEEVTVIECVMPVAETDT----------FEWILFDERMDNVL 244
Query: 248 EEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAV 307
K PY + R+ V + ++GR + L RL N A+ + PP + V
Sbjct: 245 YRKIYNYNPYTIFRFTVMPNNVWGRGLGVTCLDYYERLCYCENLRARQSIRIVEPPLLLV 304
Query: 308 SEAKQRN-FDLKPGYMNIGALSREGRSLFQPVQ-FGNPLPYHEELNRLKESIRSLFLLDL 365
+ + + FDL P +N G G++ P+ G LP +++ R + I+++ +
Sbjct: 305 GDKRLIDGFDLDPNGLNWGGDGITGQANAVPMNTTGTLLPLDQDIQRYTQVIQAIHFNNP 364
Query: 366 FQVLDDKASRSAAE 379
++++ +R AE
Sbjct: 365 MGSVENRTTRGNAE 378
>gi|212703247|ref|ZP_03311375.1| hypothetical protein DESPIG_01289 [Desulfovibrio piger ATCC 29098]
gi|212673291|gb|EEB33774.1| hypothetical protein DESPIG_01289 [Desulfovibrio piger ATCC 29098]
Length = 552
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 101/506 (19%), Positives = 189/506 (37%), Gaps = 45/506 (8%)
Query: 56 KLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSR 115
K ++ ++ ITP W FL + D E+ D V + +
Sbjct: 65 KAAAGMTQAITPASSPWF--------RHQFLDRADREVTGGNEYVDVVDARIRAVL--AA 114
Query: 116 SGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSV 175
GF + +F ++ FG C + D + + R+ ++++ + V
Sbjct: 115 GGFYSAIHAFNRELLGFG--CALLSCDASARTVA---RFACQTCGTYAVALDEDRTLSCV 169
Query: 176 YREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKK-DKGNKGF 234
R T ++ ++G L + L ++ V + D ++ D N F
Sbjct: 170 VRRLRMTPVEMSRRFGRDRLCEATRQKLESQPYAPIEVVQVVRKREERDPERGDNRNMPF 229
Query: 235 HSKFVSVDE--NRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNEL 292
S F D+ E + P+ + A +YG P +AL + +
Sbjct: 230 AS-FWYEDQGGTELLRESGFRSMPFFFSTWE-DARGVYGTGPGDDALADQKGIEAWEKRK 287
Query: 293 AQFGRLSLHPPTIAVSEAKQRNFDLKPG-------YMNIGALSREGRSLFQPVQFGNPL- 344
A + + PP +A K R+ PG Y AL R L++ V FG +
Sbjct: 288 AVGIEMMIQPPLLAPGTLK-RHVRAMPGSVISDTAYGQSNAL----RPLYE-VNFGPAVG 341
Query: 345 PYHEELNRLKESIRSLFLLDLFQVLD---DKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
+E+ ++ + + ++F + A + E M++ R +GP + +
Sbjct: 342 AVQQEIEQISMRLEDVMKANIFANMSLETRPAGMTMTEYMDRRRRAAELMGPTVSSYEPR 401
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+ I R +LD +G LP +P + L V Y SP+ + + + S Q ++ V
Sbjct: 402 VLTLCIERVYQLLDEEGLLPPPPQGLSP-WATLNVSYQSPMAQMLEQAAAVSIGQFMDQV 460
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQH 521
P+ +D +D D++ PA +IR +V IRQQRE ++
Sbjct: 461 GPWA--QSQPTILDKLDLDQMVDELAQRLGVPASIIRSDEQVAAIRQQREQAAAAQQQAA 518
Query: 522 LQQQLQQTSQDIG-----AKAAGRAM 542
++ Q+ ++ +G AG+ M
Sbjct: 519 MEVQMMESMAKMGNVKTEGTVAGKVM 544
>gi|307946242|ref|ZP_07661577.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307769906|gb|EFO29132.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 519
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 141/333 (42%), Gaps = 29/333 (8%)
Query: 155 ISVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALA-RNENERFTI 213
ISVP+ + + N + +++ + +V + W + +K L + E E
Sbjct: 152 ISVPIEELLIENGPNNRISAIFWKRKMSVRVLQDTWPEGKFGENLKKLLKEKPEGEIDVN 211
Query: 214 IHAVY-PKSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGR 272
+ V+ PK + NK V +E+R T P++ RY E YGR
Sbjct: 212 VDTVWVPKERRWRMIVWCNK--QETAVFQNESR--------TCPWLFARYFRVPGEAYGR 261
Query: 273 SPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGA---LSR 329
P M A+PTI+ LN Q +++ V + F+ + GA ++R
Sbjct: 262 GPVMLAMPTIKTLNTAARLQLQAAAIAMLGIYTTVDDGV---FNPDLASLEPGAFWKVAR 318
Query: 330 EGRSLFQPV-QFGNPL--PYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTRE 386
G +L + +F +P + LN ++ +++ ++D D A RSA E +E+ +
Sbjct: 319 NGGALGPSINRFPDPRLDLSNLVLNDMRMGVKAT-MMDQSLPADGAAVRSATEILERVKR 377
Query: 387 KGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVS--LLKVEYTSPLFK 444
+ G L E + + R ++I ++G + +D P+ L++V SPL
Sbjct: 378 LASDHLGAYGRLVKEIVIPAVKRAMEIAYNKGLI-----SDEIPIDQLLVRVRVKSPLAL 432
Query: 445 YQQAESVASALQGVNTVVELGVKTGDPSCMDHM 477
++A+ V +Q + V+ +G G P + +
Sbjct: 433 AREAQRVEKVIQWLQMVISIGAAVGQPGFLQQI 465
>gi|157828579|ref|YP_001494821.1| hypothetical protein A1G_03995 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|157801060|gb|ABV76313.1| hypothetical protein A1G_03995 [Rickettsia rickettsii str. 'Sheila
Smith']
Length = 111
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 175 VYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNK-- 232
+YR F+ + +KW D + K LA+N +E I+H V P+S + K K
Sbjct: 1 MYRLFSMPIKAASAKWPD---FADFKERLAKNPDETVKILHIVSPQSENQRGKGGKGKGL 57
Query: 233 ----GFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEAL 279
+ S+++ + E + + + FP+ V + ++YG +PA A+
Sbjct: 58 MTTLAYSSEYIYLSEQKIISQSGYSYFPFFVTLWIKGEGQVYGYAPAHHAI 108
>gi|165933293|ref|YP_001650082.1| hypothetical protein RrIowa_0838 [Rickettsia rickettsii str. Iowa]
gi|165908380|gb|ABY72676.1| hypothetical protein RrIowa_0838 [Rickettsia rickettsii str. Iowa]
Length = 111
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 175 VYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNK-- 232
+YR F+ + +KW D + K LA+N +E I+H V P+S + K K
Sbjct: 1 MYRLFSMPIKAASAKWPD---FADFKERLAKNPDETVKILHIVSPQSENQRGKGGKGKGL 57
Query: 233 ----GFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEAL 279
+ S+++ + E + + FP+ V + ++YG +PA A+
Sbjct: 58 MTTLAYSSEYIYLSEQKIISQSGYLYFPFFVTLWIKGEGQVYGYAPAHHAI 108
>gi|259419010|ref|ZP_05742927.1| hypothetical protein SCH4B_4395 [Silicibacter sp. TrichCH4B]
gi|259345232|gb|EEW57086.1| hypothetical protein SCH4B_4395 [Silicibacter sp. TrichCH4B]
Length = 506
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 129/332 (38%), Gaps = 47/332 (14%)
Query: 143 VDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSA 202
VD L I + +VP+ +Y++ + D +R F + + D ++
Sbjct: 136 VDRPTLNGAINFEAVPIPQLYVTPGPLGIEDR-FRRQRFHYRNLKVLFPDAKFPRAIEDK 194
Query: 203 LARNENERFTIIHAVYPKSLTDKKKD--KGNKGFHSKFVSVDENRFFEEKQIATFPYIVG 260
+ ++ N ++H + ++ D + + K + +D++ I +VG
Sbjct: 195 IKKSSNALAVVVHGFW-RTFEDVENPVWRHEIRVDGKPIGLDKDV----GSIGAVNLVVG 249
Query: 261 RYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPG 320
R+ A +GR P + LP R+ +E V + +L PP + DL G
Sbjct: 250 RFNPYAGSAWGRGPGRKLLPVFRQYDELVRMNMEGLDRTLDPPFTYPHDGM---LDLSQG 306
Query: 321 YMN-IGALSREG-RSLFQPVQFGNPLPY---HEELNRLKESIRSLFLLDLFQV------- 368
N +G + G + QPV FG L Y EE +L++ IR F + Q
Sbjct: 307 LENGVGYPTMPGTKDALQPVLFGT-LDYGFFSEE--KLEQKIRDGFYREKEQAGKTPPSA 363
Query: 369 -----LDDKASRSAAESMEKT-REKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPE 422
++K R A KT RE G + + L+ + G++ EL ++DS
Sbjct: 364 SQYIGQENKQVRRMARPATKTWREFGVGLLSRVEWLERQPGGSLEGAELPLIDS------ 417
Query: 423 CEGADNPPVSLLKVEYTSPLFKYQQAESVASA 454
++ SPL + Q + V +A
Sbjct: 418 ---------GVVNARPISPLERAQAMQDVTTA 440
>gi|291294768|ref|YP_003506166.1| NAD-dependent epimerase/dehydratase [Meiothermus ruber DSM 1279]
gi|290469727|gb|ADD27146.1| NAD-dependent epimerase/dehydratase [Meiothermus ruber DSM 1279]
Length = 501
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 409 RELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKT 468
R LD+L G P +P + +++ ++ +Q + V A++GV+TVV LG
Sbjct: 168 RLLDLL-LFGKEPIAHVLHHPNLEIIQADF-------RQVDKVVEAMRGVDTVVHLGGLV 219
Query: 469 GDPSCMDHMDTDRVSRFSLWATNTPA 494
GDP+C +D + +L AT T A
Sbjct: 220 GDPACA--LDENLTIEINLVATRTIA 243
>gi|198418843|ref|XP_002122505.1| PREDICTED: similar to myosin VIIA [Ciona intestinalis]
Length = 631
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 21/97 (21%)
Query: 84 AFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQ--SFYTSVVEFGTGCFYMEA 141
A LY +D K ++WC V +TL E+SRSG CL+ V+ + T F A
Sbjct: 458 ASLYGDD----KGKKWCQMVYNTLKALAEKSRSG--ACLEPIEIMQQVIRYATIAFV--A 509
Query: 142 DVDE-------KGLEEGIRYISVPLSNVYMSVNHQNV 171
+ + K + EG R PL+N+ + +NH+N+
Sbjct: 510 NFTKSFRLSTFKSITEGGR----PLTNLTLQLNHENL 542
>gi|291334263|gb|ADD93926.1| hypothetical protein [uncultured marine bacterium
MedDCM-OCT-S08-C235]
Length = 130
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Query: 371 DKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQG--NLPECEGADN 428
++ SA E E+ + +G G LQ+E + ++ R + IL QG N+P G +
Sbjct: 6 NRTPMSATEVAERMADLSRQIGSSFGRLQAEMVTPVLQRVIHILKKQGRINIPTVNGRE- 64
Query: 429 PPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVEL-GVKTGDPSCMDHMDTDRVSRF 485
+K++ TSPL + Q + + G N +EL G + G +D++ +++
Sbjct: 65 -----IKIQSTSPLAQAQANQDI----NGFNRFLELVGARFGPQLINLLVDSNEATKY 113
>gi|317402178|gb|EFV82769.1| ferrochelatase [Achromobacter xylosoxidans C54]
Length = 363
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 17/100 (17%)
Query: 440 SPLFKY--QQAESVASALQ--GVNTVVELGVKTGDPSCMDHMDTDR---------VSRFS 486
SPL Y +QAE V +AL GV VVELG++ G+PS D + R V +
Sbjct: 104 SPLMVYSRRQAEGVQAALSAAGVEAVVELGMRYGNPSIPDAISRLRAQGCERILTVPLYP 163
Query: 487 LWATNTPAVLI----RDTAEVEDIRQQREVQRRVMEEQHL 522
+A +T A ++ R A + D + R ++R E +L
Sbjct: 164 QYAASTTATVVDAVTRHAARLRDQPEMRFIKRFHQEPLYL 203
>gi|320033090|gb|EFW15039.1| fatty acid synthase beta subunit [Coccidioides posadasii str.
Silveira]
Length = 1334
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 268 EIYGRSPAMEALPTIRRLNETV-NELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMN--I 324
E+ G++ T+R N+TV + + G++ L PT + + ++ + N I
Sbjct: 731 ELLGQTLTFRLQSTVRFKNKTVFHSVETMGQVLLELPTKEIIQVASVEYEAGTSHGNPVI 790
Query: 325 GALSREGRSLFQPVQFGNPLP 345
L R G+S+ QPV F NP+P
Sbjct: 791 DYLQRHGQSIEQPVHFENPIP 811
>gi|293402283|ref|ZP_06646421.1| putative thioredoxin [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304390|gb|EFE45641.1| putative thioredoxin [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 603
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 177 REFTFTVDQIV-------SKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDK 229
RE F VD + + W +KVL K L ER A++P L + +D+
Sbjct: 485 REKVFNVDTDLFEPVNSFADWNEKVLKVNDKPVLVLFGAERCVHCKALHP-VLEEALQDE 543
Query: 230 GNKGFHSKFVSVDENR-FFEEKQIATFPYIVGRYR 263
N FH ++V+VDEN+ + + P +V YR
Sbjct: 544 FNSSFHIRYVNVDENKDIVDACHVQGIP-VVAIYR 577
Searching..................................................done
Results from round 2
>gi|254781213|ref|YP_003065626.1| head-to-tail joining protein, putative [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040890|gb|ACT57686.1| head-to-tail joining protein, putative [Candidatus Liberibacter
asiaticus str. psy62]
gi|317120678|gb|ADV02501.1| putative phage-related head-to-tail joining protein [Liberibacter
phage SC1]
gi|317120822|gb|ADV02643.1| putative phage-related head-to-tail joining protein [Candidatus
Liberibacter asiaticus]
Length = 556
Score = 690 bits (1780), Expect = 0.0, Method: Composition-based stats.
Identities = 556/556 (100%), Positives = 556/556 (100%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLRMWDTTGSEACIKLSSL 60
MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLRMWDTTGSEACIKLSSL
Sbjct: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLRMWDTTGSEACIKLSSL 60
Query: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG
Sbjct: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
Query: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT
Sbjct: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS 240
FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS
Sbjct: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS 240
Query: 241 VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSL 300
VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSL
Sbjct: 241 VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSL 300
Query: 301 HPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSL 360
HPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSL
Sbjct: 301 HPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSL 360
Query: 361 FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNL 420
FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNL
Sbjct: 361 FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNL 420
Query: 421 PECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTD 480
PECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTD
Sbjct: 421 PECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTD 480
Query: 481 RVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGR 540
RVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGR
Sbjct: 481 RVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGR 540
Query: 541 AMEKKLTHDMMENSYG 556
AMEKKLTHDMMENSYG
Sbjct: 541 AMEKKLTHDMMENSYG 556
>gi|315122900|ref|YP_004063389.1| head-to-tail joining protein, putative [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496302|gb|ADR52901.1| head-to-tail joining protein, putative [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 555
Score = 613 bits (1580), Expect = e-173, Method: Composition-based stats.
Identities = 396/555 (71%), Positives = 458/555 (82%), Gaps = 1/555 (0%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLRMWDTTGSEACIKLSSL 60
MN S K I+ F +LK+QR ELN MEELT LYPYK + RMWDTTGSEACIKLSSL
Sbjct: 1 MNN-SIKKIKTCFEHLKSQREELNTRMEELTSLLYPYKQEPKSRMWDTTGSEACIKLSSL 59
Query: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
LSSLITPPGQKWHGL+E F +QAFLY+EDA +KK+R WCDQVTD LFGFRERSRSGFV
Sbjct: 60 LSSLITPPGQKWHGLSEPFFRHQAFLYEEDAGAKKIRGWCDQVTDVLFGFRERSRSGFVS 119
Query: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
CLQSFYTS+VEFGTGCFY+EADVDE GLEEGIRYI+VPL++VY+SVNHQN VDS+YR F
Sbjct: 120 CLQSFYTSIVEFGTGCFYIEADVDETGLEEGIRYIAVPLADVYLSVNHQNEVDSIYRTFE 179
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS 240
FT +QI KWG KVLS KMKS+ + E ++F IIHAVYPKSL +KKKDKGNK FHSKFV
Sbjct: 180 FTAEQIGGKWGYKVLSDKMKSSYEKKEPDKFKIIHAVYPKSLAEKKKDKGNKNFHSKFVC 239
Query: 241 VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSL 300
+DEN FFEEKQI T PYI+GRYRVRADEIYG+SPAMEALP IRRLNE NELAQ+ RLSL
Sbjct: 240 IDENVFFEEKQITTLPYIIGRYRVRADEIYGKSPAMEALPAIRRLNEISNELAQYARLSL 299
Query: 301 HPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSL 360
HP +A +EAKQ F +K ++N GA+S++G++LFQP+Q GNPLP++EEL R++ SI SL
Sbjct: 300 HPAYLAPTEAKQLEFKIKSRHINTGAMSKDGKALFQPLQVGNPLPFYEELKRIQGSIHSL 359
Query: 361 FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNL 420
FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI RELDILD+Q NL
Sbjct: 360 FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIKRELDILDAQHNL 419
Query: 421 PECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTD 480
PE D+ P LLKVEYTSPLFKYQQAESVAS LQG NTV+ELG KTG+P MDH+D D
Sbjct: 420 PELTDYDHSPFHLLKVEYTSPLFKYQQAESVASVLQGTNTVLELGAKTGNPEPMDHIDID 479
Query: 481 RVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGR 540
+VSRF+LWA+ +PA LIRD EV+ R+ R+ Q M+ + QQ +Q + GAKA +
Sbjct: 480 KVSRFALWASGSPAHLIRDVDEVKQRRKDRDDQMEAMQNRQDAQQQEQMGMEAGAKAVSK 539
Query: 541 AMEKKLTHDMMENSY 555
A+EKK+T+D+MENSY
Sbjct: 540 AIEKKMTNDLMENSY 554
>gi|315121938|ref|YP_004062427.1| head-to-tail joining protein, putative [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495340|gb|ADR51939.1| head-to-tail joining protein, putative [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 555
Score = 612 bits (1579), Expect = e-173, Method: Composition-based stats.
Identities = 399/555 (71%), Positives = 457/555 (82%), Gaps = 1/555 (0%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLRMWDTTGSEACIKLSSL 60
MN S K I+ F +LK+QR ELN MEELT LYPYK + RMWDTTGSEACIKLSSL
Sbjct: 1 MNN-SIKKIKTCFEHLKSQREELNTRMEELTSLLYPYKQEPKSRMWDTTGSEACIKLSSL 59
Query: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
LSSLITPPGQKWHGL+E F +QAFLY+EDA +KK+R WCDQVTD LFGFRERSRSGFV
Sbjct: 60 LSSLITPPGQKWHGLSEPFFRHQAFLYEEDAGAKKIRGWCDQVTDVLFGFRERSRSGFVS 119
Query: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
CLQSFYTS+VEFGTGCFY+EADVDE GLEEGIRYI+VPL++VY+SVNHQN VDS+YR F
Sbjct: 120 CLQSFYTSIVEFGTGCFYIEADVDETGLEEGIRYIAVPLADVYLSVNHQNEVDSIYRTFE 179
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS 240
FT +QI KWG KVLS KMKS+ + E ++F IIHAVYPKSL +KKKDKGNK FHSKFV
Sbjct: 180 FTAEQIGGKWGYKVLSDKMKSSYEKKEPDKFKIIHAVYPKSLAEKKKDKGNKNFHSKFVC 239
Query: 241 VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSL 300
+DEN FFEEKQI T PYI+GRYRVRADEIYG+SPAMEALP IRRLNE NELAQ+ RLSL
Sbjct: 240 IDENVFFEEKQITTLPYIIGRYRVRADEIYGKSPAMEALPAIRRLNEISNELAQYARLSL 299
Query: 301 HPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSL 360
HP +A EAKQ F K YMNIGA+S++G++LFQP+Q GNPLP++EEL R++ SI SL
Sbjct: 300 HPAYLAPPEAKQLEFKNKSRYMNIGAMSKDGKALFQPLQVGNPLPFYEELKRIQGSIHSL 359
Query: 361 FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNL 420
FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI RELDILD+Q NL
Sbjct: 360 FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIKRELDILDAQHNL 419
Query: 421 PECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTD 480
PE D+ P LLKVEYTSPLFKYQQAESVAS LQG NTV+ELG KTG+P MDH+D D
Sbjct: 420 PELTDYDHSPFHLLKVEYTSPLFKYQQAESVASVLQGTNTVLELGAKTGNPEPMDHIDID 479
Query: 481 RVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGR 540
+VSRF+LWA+ +PA LIRD EV+ R+ R+ Q M+ + QQ +Q + GAKA +
Sbjct: 480 KVSRFALWASGSPAHLIRDVDEVKQRRKDRDDQMEAMQNRQDAQQQEQMGMEAGAKAVSK 539
Query: 541 AMEKKLTHDMMENSY 555
A+EKK+T+D+MENSY
Sbjct: 540 AIEKKMTNDLMENSY 554
>gi|327252184|gb|EGE63856.1| bbp21 [Escherichia coli STEC_7v]
Length = 559
Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats.
Identities = 132/559 (23%), Positives = 240/559 (42%), Gaps = 40/559 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D D + IR + P+ + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAMAVLEDDD-----DIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERF-TIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPL 344
L +Q + +PP IA + K + L PG + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMIAPTSLKNQRASLLPGDITY-IDQITGQDGFRPAYLVNPS 344
Query: 345 PYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQ 520
+ +L P +D ++ D+ + +I +VE RQQR Q++ +
Sbjct: 463 IGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVEQARQQRAQQQQQQQMM 520
Query: 521 HLQQQLQQTSQDIGAKAAG 539
+ Q ++ +
Sbjct: 521 EMGMAAAQGAKTLSEAKTS 539
>gi|301019343|ref|ZP_07183529.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|299882260|gb|EFI90471.1| conserved hypothetical protein [Escherichia coli MS 196-1]
Length = 559
Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats.
Identities = 131/559 (23%), Positives = 240/559 (42%), Gaps = 40/559 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEANRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERF-TIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPL 344
L +Q + +PP +A + K + L PG + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITY-IDQITGQDGFRPAYLVNPS 344
Query: 345 PYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDAMEGIP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQ 520
+ +L P +D ++ D+ + +I +VE RQQR Q++ +
Sbjct: 463 IGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVEQARQQRAQQQQQQQMM 520
Query: 521 HLQQQLQQTSQDIGAKAAG 539
+ Q ++ +
Sbjct: 521 AVGMAAAQGAKTLSEAKTS 539
>gi|218700990|ref|YP_002408619.1| putative head-to-tail-joining protein [Escherichia coli IAI39]
gi|218370976|emb|CAR18803.1| putative head-to-tail-joining protein [Escherichia coli IAI39]
Length = 559
Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats.
Identities = 131/559 (23%), Positives = 239/559 (42%), Gaps = 40/559 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+ S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NNSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERF-TIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPL 344
L +Q + +PP +A + K + L PG + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITY-IDQITGQDGFRPAYLVNPS 344
Query: 345 PYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQ 520
+ +L P +D ++ D+ + +I +VE RQQR Q++ +
Sbjct: 463 IGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVEQARQQRAQQQQQQQMM 520
Query: 521 HLQQQLQQTSQDIGAKAAG 539
+ Q ++ +
Sbjct: 521 AMGMVAAQGAKTLSEAKTS 539
>gi|117624712|ref|YP_853625.1| putative tail protein [Escherichia coli APEC O1]
gi|115513836|gb|ABJ01911.1| putative tail protein [Escherichia coli APEC O1]
Length = 559
Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats.
Identities = 125/524 (23%), Positives = 229/524 (43%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERF-TIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPL 344
L +Q +PP +A + + ++ L PG + G+ +PV NP
Sbjct: 286 LQLLQKRKSQIIDKVTNPPMVAPTTLRTQSVSLLPGGVTY-VDQLTGQEGLRPVYQVNPN 344
Query: 345 PYHE--ELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ +++I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLISDIQDTRQTINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L G P +D ++ D+ + +I +VE
Sbjct: 463 IGQLA--QGKPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|294492610|gb|ADE91366.1| conserved hypothetical protein [Escherichia coli IHE3034]
gi|323948685|gb|EGB44590.1| hypothetical protein ERKG_04908 [Escherichia coli H252]
Length = 559
Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats.
Identities = 124/524 (23%), Positives = 226/524 (43%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERF-TIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPL 344
L +Q + +PP +A + K + L PG + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITY-IDQITGQDGFRPAYLVNPS 344
Query: 345 PYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRSFSMMVRKNMLPPPPDVMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L P +D ++ D+ + +I +VE
Sbjct: 463 IGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|331648176|ref|ZP_08349266.1| conserved hypothetical protein [Escherichia coli M605]
gi|331043036|gb|EGI15176.1| conserved hypothetical protein [Escherichia coli M605]
Length = 559
Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats.
Identities = 125/524 (23%), Positives = 227/524 (43%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERF-TIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPL 344
L +Q + +PP +A + K + L PG + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITY-IDQITGQDGFRPAYLVNPS 344
Query: 345 PYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L P +D ++ D+ + +I +VE
Sbjct: 463 IGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|323156133|gb|EFZ42292.1| bbp21 [Escherichia coli EPECa14]
Length = 559
Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats.
Identities = 125/524 (23%), Positives = 227/524 (43%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERF-TIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIDVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPL 344
L +Q + +PP +A + K + L PG + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITY-IDQITGQDGFRPAYLVNPS 344
Query: 345 PYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L P +D ++ D+ + +I +VE
Sbjct: 463 IGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|300898427|ref|ZP_07116768.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300357894|gb|EFJ73764.1| conserved hypothetical protein [Escherichia coli MS 198-1]
Length = 559
Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats.
Identities = 123/524 (23%), Positives = 225/524 (42%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERF-TIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEFGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPL 344
L +Q + +PP +A + K + L PG + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITY-IDQITGQDGFRPAYLVNPS 344
Query: 345 PYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDVMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L P +D ++ D+ + +I +VE
Sbjct: 463 IGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|324008560|gb|EGB77779.1| hypothetical protein HMPREF9532_01747 [Escherichia coli MS 57-2]
Length = 559
Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats.
Identities = 125/524 (23%), Positives = 227/524 (43%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERF-TIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPL 344
L +Q + +PP +A + K + L PG + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITY-IDQITGQDGFRPAYLVNPS 344
Query: 345 PYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRSFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L P +D ++ D+ + +I +VE
Sbjct: 463 IGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|298381718|ref|ZP_06991317.1| hypothetical protein ECFG_01455 [Escherichia coli FVEC1302]
gi|298279160|gb|EFI20674.1| hypothetical protein ECFG_01455 [Escherichia coli FVEC1302]
Length = 559
Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats.
Identities = 125/524 (23%), Positives = 226/524 (43%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+ S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NNSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERF-TIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPL 344
L +Q + +PP +A + K + L PG + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITY-IDQITGQDGFRPAYLVNPS 344
Query: 345 PYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L P +D ++ D+ + +I +VE
Sbjct: 463 IGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|301046408|ref|ZP_07193568.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|300301634|gb|EFJ58019.1| conserved hypothetical protein [Escherichia coli MS 185-1]
Length = 559
Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats.
Identities = 125/524 (23%), Positives = 227/524 (43%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEANRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERF-TIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPL 344
L +Q + +PP +A + K + L PG + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITY-IDQITGQDGFRPAYLVNPS 344
Query: 345 PYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L P +D ++ D+ + +I +VE
Sbjct: 463 IGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|89152428|ref|YP_512261.1| putative head-to-tail-joining protein [Escherichia phage phiV10]
gi|74055451|gb|AAZ95900.1| putative head-to-tail-joining protein [Escherichia phage phiV10]
Length = 559
Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats.
Identities = 124/524 (23%), Positives = 226/524 (43%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAMAVLDDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERF-TIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPL 344
L +Q + +PP +A + K + L PG + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITY-IDQITGQDGFRPAYLVNPS 344
Query: 345 PYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRSFSMMVRKNMLPPPPDVMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L P +D ++ D+ + +I +VE
Sbjct: 463 IGQLA--QVKPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|320175046|gb|EFW50159.1| putative tail protein [Shigella dysenteriae CDC 74-1112]
Length = 559
Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats.
Identities = 125/524 (23%), Positives = 226/524 (43%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+ S L Y S+ + TG + D E+ IR + P+ + Y++ + +
Sbjct: 113 MF--NESNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERF-TIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPL 344
L +Q + +PP +A + K + L PG + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPTSLKNQRASLLPGDITY-IDQITGQDGFRPAYLVNPS 344
Query: 345 PYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L P +D ++ D+ + +I +VE
Sbjct: 463 IGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|332344354|gb|AEE57688.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 559
Score = 553 bits (1424), Expect = e-155, Method: Composition-based stats.
Identities = 124/524 (23%), Positives = 225/524 (42%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + +F L+++R EL+ ++ P + R+ D+T
Sbjct: 1 MAETTKERLNKQFAQLESERQSFEPHWRELSDYINPRGSRFLTSEVNRNDRRNTRIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ A L+S + S IT P + W LA + V+ W + V + +
Sbjct: 61 GTMAARTLASGMMSGITSPARPWFRLATPDPEMMDY--------GPVKLWLEAVQNRMND 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ + TG + D E+ IR + + + Y++ + +
Sbjct: 113 MF--NKSNLYQSLPQLYGSLGTYSTGAMAVLEDD-----EDIIRTMPFTIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERF-TIIHAVYPKSLTDK-KK 227
VD+ +R+F+ TV Q+V ++G +S +KS E++ ++H+VYP D K
Sbjct: 166 GSVDTCFRKFSMTVRQLVQEFGLNNVSESVKSMWESGTYEKWIEVMHSVYPNIDRDTSKL 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + V D ++ E FP + R+ V +++YG S P M AL ++
Sbjct: 226 DSKNKPFKSVYYEVGGDNDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMLALGPVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPL 344
L +Q + +PP +A K + L PG + G+ F+P NP
Sbjct: 286 LQLLQKRKSQLIDKATNPPMVAPISLKNQRASLLPGDITY-IDQITGQDGFRPAYLVNPS 344
Query: 345 PYH--EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ ++ I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLVADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L P +D ++ D+ + +I +VE
Sbjct: 463 IGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|215487822|ref|YP_002330253.1| predicted phage head-tail connector protein [Escherichia coli
O127:H6 str. E2348/69]
gi|215265894|emb|CAS10303.1| predicted phage head-tail connector protein [Escherichia coli
O127:H6 str. E2348/69]
Length = 556
Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats.
Identities = 128/559 (22%), Positives = 230/559 (41%), Gaps = 40/559 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + LKN+R +L+ F+ P + ++ D T
Sbjct: 1 MAETEKERLLKQLAQLKNERTSFESHWRDLSDFINPRGSRFLTSDVNRDDRRNTKIVDPT 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
GS A LSS + S IT P + W LA + V+ W + V +
Sbjct: 61 GSMAQRILSSGMMSGITSPARPWFKLATPDPDMMDY--------GPVKIWLEVVQRRMNE 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ FGTG + D ++ IR + P+ + Y++ + +
Sbjct: 113 VF--NKSNLYQSLPVMYASLGTFGTGAMAVLEDD-----QDVIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLTD-KKK 227
VD+ R+F+ TV Q+V ++G +S+ +K E + H + P D K
Sbjct: 166 GSVDTCIRQFSMTVRQMVQEFGLDNVSTSVKGMWENGTYETWVKVNHCITPNVNRDSGKM 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK + S + D ++ E FP + R+ V +++Y S P M AL ++
Sbjct: 226 DSKNKPYRSVYFESGGDSDKLLRESGFDEFPILAPRWEVNGEDVYASSCPGMLALGQVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L AQ + +PP +A + K + L PG + + G+ F+P NP
Sbjct: 286 LQVEQKRKAQLIDKATNPPMVAPTSLKNQRVSLLPGDVTYLDV-LTGQDGFKPAYLVNPN 344
Query: 344 -LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ +++I S + +DLF +L +RS +E EK +GP++ L
Sbjct: 345 TADLLADIQDTRQTINSAYFVDLFMMLQKINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R I+ + LPE L++EY S + + Q++ + S Q V
Sbjct: 405 EALNPLIDRVFSIMARKNMLPEPPDVLQGMP--LRIEYISVMAQAQKSIGLTSLSQTVGF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQ 520
+ +L P +D +D D+ + +I +V+ IR++R Q + +
Sbjct: 463 IGQLA--QFKPEALDKLDVDQAIDAFSEMSGVSPTVIVPQEQVQGIREERAKQAQAAQAM 520
Query: 521 HLQQQLQQTSQDIGAKAAG 539
+ Q Q ++ +
Sbjct: 521 AMGQAAAQGAKTLSETQTS 539
>gi|242279813|ref|YP_002991942.1| hypothetical protein Desal_2347 [Desulfovibrio salexigens DSM 2638]
gi|242122707|gb|ACS80403.1| conserved hypothetical protein [Desulfovibrio salexigens DSM 2638]
Length = 555
Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats.
Identities = 142/529 (26%), Positives = 228/529 (43%), Gaps = 39/529 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK--------NNAQLR---MWDTT 49
M R L+ +R ++++ ++ P K N+ ++R + D+T
Sbjct: 1 MRHIENNQYLRRLQGLRQERNSWESHWQDISDYILPRKGVYDGHRPNDGRVRSGKIIDST 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
+ A L++ L +T P + W L S ++ AR K VREW +V +T++
Sbjct: 61 ATRALRILAAGLQGGLTSPARPWFRLGISD--------RDLARHKSVREWISKVENTMY- 111
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
R +RS F C+ S YT + FGTG Y E D E GIR+ ++ ++ + Q
Sbjct: 112 -RALARSNFYSCIHSLYTELAGFGTGILYCEPDD-----ERGIRFRTLTAGEYCLATDAQ 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKK-KD 228
VD+VYREF T Q+ ++G + L + + S+L N + F ++H V P+ D D
Sbjct: 166 GRVDTVYREFKMTARQLEKRFGMQNLPATVHSSLNMNRDHWFDVLHVVQPRDEFDIALMD 225
Query: 229 KGNKGFHSKFVSVD-ENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNE 287
N F S F+ E PY+ R+ A ++YGRSPAM+ L ++ L E
Sbjct: 226 TMNMPFESVFLLNGHGGHVLSESGFMENPYMAPRWDTSAMDVYGRSPAMDVLADVKMLME 285
Query: 288 TVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP--LP 345
Q L+L PP R +L PG N + + + P+ P
Sbjct: 286 MSKSQIQAVHLTLRPPMKVP-SMYSRRLNLLPGGQNP--VEQNQQDSVSPLYQVRPDLAG 342
Query: 346 YHEELNRLKESIRSLFLLDLFQVLDDKASR--SAAESMEKTREKGAFVGPLIGGLQSEFI 403
++ ++ +IR F D+F ++ R +AAE E+ EK +GP+I +E +
Sbjct: 343 VSNKIQDVRTAIREGFYNDIFMMMAGTNRRTITAAEVAERHEEKLIQLGPVIERQHTELL 402
Query: 404 GAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVE 463
+I R IL G LPE +K++Y S L + Q+ S V
Sbjct: 403 DPLIDRVFGILMRSGQLPEAPSVLEGAD--IKIDYISVLAQAQKMVGTQSIQSLAQFVGN 460
Query: 464 LGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREV 512
L +P +D +D DR P ++R EVE +R R+
Sbjct: 461 LA--KANPEVLDKVDMDRAVDDYAELIGVPNGIVRSGDEVEKLRNMRKD 507
>gi|30387383|ref|NP_848212.1| hypothetical protein epsilon15p04 [Enterobacteria phage epsilon15]
gi|30266038|gb|AAO06067.1| 4 [Salmonella phage epsilon15]
Length = 556
Score = 548 bits (1412), Expect = e-154, Method: Composition-based stats.
Identities = 128/559 (22%), Positives = 231/559 (41%), Gaps = 40/559 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + LKN+R +L+ F+ P + ++ D T
Sbjct: 1 MAETEKERLLKQLAQLKNERTSFESHWLDLSDFINPRGSRFLTSDVNRDDRRNTKIVDPT 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
GS A LSS + S IT P + W LA + V+ W + V +
Sbjct: 61 GSMAQRILSSGMMSGITSPARPWFKLATPDPDMMDY--------GPVKIWLEVVQRRMNE 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ FGTG + D ++ IR + P+ + Y++ + +
Sbjct: 113 VF--NKSNLYQSLPVMYASLGTFGTGAMAVMEDD-----QDVIRTMPFPIGSYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLTD-KKK 227
VD+ R+F+ TV Q+V ++G +S+ +K E + H + P D K
Sbjct: 166 GSVDTCIRQFSMTVRQMVQEFGLDNVSTSVKGMWENGTYETWVEVNHCITPNVNRDSGKM 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK + S + D ++ E FP + R+ V +++Y S P M AL ++
Sbjct: 226 DSKNKPYRSVYFESGGDSDKLLRESGFDEFPILAPRWEVNGEDVYASSCPGMLALGQVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L AQ + +PP +A + K + L PG + + G+ F+P NP
Sbjct: 286 LQVEQKRKAQLIDKATNPPMVAPTSLKNQRVSLLPGDVTYLDV-ISGQDGFKPAYLVNPN 344
Query: 344 -LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ +++I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLLADIQDTRQTINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R I+ + LPE L++EY S + + Q++ + S Q V
Sbjct: 405 EALNPLIDRVFSIMARKNMLPEPPDVLQGMP--LRIEYISVMAQAQKSIGLTSLSQTVGF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQ 520
+ +L P +D +D D+ + +I +V+ IR++R Q + +
Sbjct: 463 IGQLA--QFKPEALDKLDVDQAIDAFSEMSGVSPTVIVPQEQVQGIREERAKQAQAAQAM 520
Query: 521 HLQQQLQQTSQDIGAKAAG 539
+ Q Q ++ +
Sbjct: 521 AMGQAAAQGAKTLSETQTS 539
>gi|187476929|ref|YP_784953.1| phage head-tail connector protein [Bordetella avium 197N]
gi|115421515|emb|CAJ48024.1| Putative phage head-tail connector protein [Bordetella avium 197N]
Length = 555
Score = 547 bits (1409), Expect = e-153, Method: Composition-based stats.
Identities = 132/557 (23%), Positives = 234/557 (42%), Gaps = 37/557 (6%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLR---MWDTTG 50
Q K + R+ LK +R +E++ +L P +N R + D TG
Sbjct: 3 EQTERKLLLSRWGQLKAERESWISHWKEISDYLLPRSGRFFINDRNRGGKRHNNILDNTG 62
Query: 51 SEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGF 110
+ A L++ + + +T P + W L S E S V+ W VT +
Sbjct: 63 TRALRVLAAGMMAGMTSPARPWFRLTTSIP--------ELDESAAVKAWLANVTRLMLMV 114
Query: 111 RERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQN 170
++S L S Y + FGT + D ++ IR+ ++ ++ ++Q
Sbjct: 115 F--AKSNTYRALHSTYEELGLFGTASSIVLPDF-----KDVIRHHTLSAGEYAIAADNQG 167
Query: 171 VVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNE-NERFTIIHAVYPKSLTDK-KKD 228
VD++YREF TV Q+V ++G S+ +++ R + T+IHA+ P++ D K+D
Sbjct: 168 RVDTLYREFQITVAQMVREFGKDKCSTTVRNLFDRGALEQWVTVIHAIEPRADRDPNKRD 227
Query: 229 KGNKGFHSKFVS--VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLN 286
N + S +V DE R E +F + R+ + +IYG SPAMEAL +R+L
Sbjct: 228 DRNMAWKSVYVELGADETRTLRESGYRSFRALCPRWALAGGDIYGNSPAMEALGDVRQLQ 287
Query: 287 ETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG-NPLP 345
AQ +PP AK ++ PG ++ ++ + + +
Sbjct: 288 HEQLRKAQGIDYKSNPPLQLPVSAKNQDISTVPGGLSYVDVAAPNGGIRTAFEVNLDLSH 347
Query: 346 YHEELNRLKESIRSLFLLDLFQVLDDK--ASRSAAESMEKTREKGAFVGPLIGGLQSEFI 403
++ ++E I++ F DLF +L + +A E E+ EK +GP++ + +E +
Sbjct: 348 LLADIVDVRERIKASFYADLFLMLANGTNPKMTATEVAERHEEKLLMLGPVLERMHNEIL 407
Query: 404 GAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVE 463
+I + LP L VE+ S L + Q+A + S + V +
Sbjct: 408 DPLIELTFQRMVEANILPPPPQEMQGVD--LNVEFVSMLAQAQRAIATNSVDRFVGNLG- 464
Query: 464 LGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQ 523
V P +D + DR + LI +V IR+QR Q++ ++ L
Sbjct: 465 -VVAKIKPEVLDKFNADRWADTYADMLGIDPELIVPGNQVALIRKQRAEQQQAAQQAALL 523
Query: 524 QQLQQTSQDIGAKAAGR 540
Q T+ +G+ +
Sbjct: 524 NQGADTAAKLGSVDTSK 540
>gi|309702812|emb|CBJ02143.1| putative phage protein [Escherichia coli ETEC H10407]
Length = 559
Score = 541 bits (1393), Expect = e-151, Method: Composition-based stats.
Identities = 122/524 (23%), Positives = 218/524 (41%), Gaps = 40/524 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTT 49
M + + + + LK++R +L+ F+ P + ++ D T
Sbjct: 1 MAETEKERLLKQLAQLKSERTSFESHWRDLSDFINPRGSRFLTSDVNRDDRRNTKIIDPT 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
GS A LSS + S IT P + W LA + V+ W + V +
Sbjct: 61 GSMAQRILSSGMMSGITSPARPWFKLATPDPDMMDY--------GPVKVWLEVVQRRMNE 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L Y S+ FGT + D ++ IR + P+ Y++ + +
Sbjct: 113 VF--NKSNLYQSLPVMYASLGTFGTAAMAVLEDD-----QDVIRTMPFPIGCYYLANSPR 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERF-TIIHAVYPKSLTD-KKK 227
VD+ +R+F+ TV Q+V ++G +SS ++ E + + H + P D K
Sbjct: 166 GSVDTSFRQFSMTVRQLVQEFGLDNVSSSVQGMWQNGTYETWIEVNHCITPNVNRDTGKM 225
Query: 228 DKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRR 284
D NK F S + D ++ E FP + R+ V +++Y S P M AL ++
Sbjct: 226 DSKNKPFRSVYFETGGDADKLLRESGFDEFPILAPRWEVNGEDVYASSCPGMLALGQVKA 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L AQ + +PP +A + K + L PG + + G+ F+P NP
Sbjct: 286 LQVEQKRKAQLIDKATNPPMVAPTSLKTQRVSLLPGDVTYLDV-LSGQDGFKPAYLVNPN 344
Query: 344 -LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQS 400
++ +++I S + +DLF +L + +RS +E EK +GP++ L
Sbjct: 345 TADLLADIQDTRQTINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLND 404
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E + +I R ++ + LP A LKVEY S + + Q++ ++S VN
Sbjct: 405 ECLNPLIDRAFSMMVRKNMLPPPPDAMEGMP--LKVEYISVMAQAQKSIGLSSLASTVNF 462
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+ +L P +D ++ D+ + +I +VE
Sbjct: 463 IGQLA--QAKPEALDKLNVDQAIDAFADMSGVSPTVIVPQEQVE 504
>gi|41179382|ref|NP_958690.1| Bbp21 [Bordetella phage BPP-1]
gi|45569514|ref|NP_996583.1| hypothetical protein BMP-1p20 [Bordetella phage BMP-1]
gi|45580765|ref|NP_996631.1| hypothetical protein BIP-1p20 [Bordetella phage BIP-1]
gi|40950121|gb|AAR97687.1| Bbp21 [Bordetella phage BPP-1]
Length = 555
Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats.
Identities = 131/557 (23%), Positives = 231/557 (41%), Gaps = 37/557 (6%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLR---MWDTTG 50
Q K + R+ L+ +R +E++ +L P +N + R + D TG
Sbjct: 3 EQTERKLLLSRWGQLRTERESWMSHWKEISDYLLPRAGRFFVQDRNRGEKRHNNILDNTG 62
Query: 51 SEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGF 110
+ A L++ + + +T P + W L S E S V+ W VT +
Sbjct: 63 TRALRVLAAGMMAGMTSPARPWFRLTTSIP--------ELDESAAVKAWLANVTRLMLMI 114
Query: 111 RERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQN 170
++S L S Y + FGT + D D + + S+ ++ ++Q
Sbjct: 115 F--AKSNTYRALHSMYEELGAFGTASSIVLPDFDA-----VVYHHSLTAGEYAIAADNQG 167
Query: 171 VVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNE-NERFTIIHAVYPKSLTDK-KKD 228
V+++YREF TV Q+V ++G S+ ++S R + T+IHA+ P++ D K+D
Sbjct: 168 RVNTLYREFQITVAQMVREFGKDKCSTTVQSLFDRGALEQWVTVIHAIEPRADRDPSKRD 227
Query: 229 KGNKGFHSKFVS--VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLN 286
N + S + DE R E +F + R+ + +IYG SPAMEAL +R+L
Sbjct: 228 DRNMAWKSVYFEPGADETRTLRESGYRSFRALCPRWALVGGDIYGNSPAMEALGDVRQLQ 287
Query: 287 ETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG-NPLP 345
AQ +PP AK ++ PG ++ + + + +
Sbjct: 288 HEQLRKAQAIDYKSNPPLQLPVSAKNQDISTVPGGLSYVDAAAPNGGIRTAFEVNLDLSH 347
Query: 346 YHEELNRLKESIRSLFLLDLFQVLDDK--ASRSAAESMEKTREKGAFVGPLIGGLQSEFI 403
++ ++E I++ F DLF +L + +A E E+ EK +GP++ + +E +
Sbjct: 348 LLADIVDVRERIKASFYADLFLMLANGTNPQMTATEVAERHEEKLLMLGPVLERMHNEIL 407
Query: 404 GAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVE 463
+I + LP L VE+ S L + Q+A + S + V +
Sbjct: 408 DPLIELTFQRMVEANILPPPPQEMQGVD--LNVEFVSMLAQAQRAIATNSVDRFVGNLG- 464
Query: 464 LGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQ 523
V P +D D DR + LI +V IR+QR Q++ ++ L
Sbjct: 465 -AVAGIKPEVLDKFDADRWADTYADMLGIDPELIVPGNQVALIRKQRADQQQAAQQAALL 523
Query: 524 QQLQQTSQDIGAKAAGR 540
Q T+ +G+ +
Sbjct: 524 NQGADTAAKLGSVDTSK 540
>gi|262043566|ref|ZP_06016679.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039100|gb|EEW40258.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 560
Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats.
Identities = 120/523 (22%), Positives = 214/523 (40%), Gaps = 40/523 (7%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTTG 50
+ + +Q + L N R + EL+ F+ P + ++ D T
Sbjct: 3 AETLKEQLQKQQAQLTNDRSSFDPHWRELSDFINPRGSRFLVTDVNRDDRRNTKIVDPTA 62
Query: 51 SEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGF 110
+ A LSS + S IT P + W LA + V+ W + V +
Sbjct: 63 TLAARTLSSGMMSGITSPARPWFKLATPDPDMMDY--------GPVKLWLEVVQRRMNEV 114
Query: 111 RERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQN 170
++S L Y S+ + TG + D + IR + P+ + YM+ + +
Sbjct: 115 F--NKSNIYQSLPLLYASLGNYSTGAMAVLEDDS-----DVIRTMMFPIGSYYMANSARG 167
Query: 171 VVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERF-TIIHAVYPKSLTDK-KKD 228
VD+ +R+F+ TV Q+V ++G +S +K E + +IHAVYP D K +
Sbjct: 168 SVDTCFRKFSMTVRQLVMEFGLNNVSDSVKGMWDSGNYESWIEVIHAVYPNIDRDTAKLN 227
Query: 229 KGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRRL 285
NK S + V D ++ E FP + R+ V +++YG S P M AL ++ L
Sbjct: 228 SKNKPVKSVYYEVGGDSDKLLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMIALGQVKAL 287
Query: 286 NETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP-- 343
+Q + +PP + S + + L PG + G+ F+P NP
Sbjct: 288 QLEQKRKSQLIDKATNPPMVGPSSLRNQRVSLLPGDITY-IDQVTGQDGFKPAYLVNPNT 346
Query: 344 LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQSE 401
++ ++ I S + +DLF +L + +RS +E EK +GP++ L E
Sbjct: 347 ADLLADIQDTRQIINSAYFVDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLERLNDE 406
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+ +I R I+ + LP L++EY S + + Q++ ++S V +
Sbjct: 407 CLNPLIDRTFSIMARKNLLPPPPDVLQGMP--LRIEYISVMAQAQKSIGLSSLSSTVGFI 464
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
+L P +D ++ D+ + +I +VE
Sbjct: 465 GQLA--QAKPEALDKLNVDQAIDAFAEMSGVSPTVIVPQEQVE 505
>gi|304398403|ref|ZP_07380277.1| phage head-tail connector protein [Pantoea sp. aB]
gi|304354269|gb|EFM18642.1| phage head-tail connector protein [Pantoea sp. aB]
Length = 553
Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats.
Identities = 133/554 (24%), Positives = 233/554 (42%), Gaps = 39/554 (7%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----------KNNAQLRMWDTTG 50
+ + + + LK++R + +L+ ++ P N + D T
Sbjct: 3 EETLKQRLNKQLGLLKSERTTFDPHWRDLSDYISPRSSRFLVSDANRDNRRNTNIVDPTC 62
Query: 51 SEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGF 110
+ A LSS + S IT P + W L+ S A + + V+ W + V +
Sbjct: 63 TLAERTLSSGMMSGITSPARPWFTLSVSDPAMKDY--------GPVKVWLEDVQRRMNEV 114
Query: 111 RERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQN 170
++S L Y + +GT + D E+ IR P+ + Y+S + +
Sbjct: 115 F--NKSNLYQSLPIVYAQLGTYGTAAMAILEDD-----EDIIRTYPFPIGSYYVSNSARL 167
Query: 171 VVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALAR-NENERFTIIHAVYPK-SLTDKKKD 228
VD+VYREF T Q+V ++G +S +K A N +IHAVYP S K D
Sbjct: 168 SVDTVYREFRMTTRQLVEQFGLDNVSETVKGQWATQNTESWHDVIHAVYPNVSRQTGKMD 227
Query: 229 KGNKGFHSKFVS-VDENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRRLN 286
NK + S + +++ E FP + R+ V ++ YG + P M AL ++ L
Sbjct: 228 AKNKRYKSVYFEKAGDDKVLRESGFDEFPILAPRWEVNGEDAYGSNCPGMTALGQVKALQ 287
Query: 287 ETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP--L 344
+Q + +PP + S K + PG + G+ +P+ NP
Sbjct: 288 LEQKRKSQLIDKATNPPMVGPSSLKTQRVSQLPGAVTY-VDQLTGQDGLKPLYMVNPNTA 346
Query: 345 PYHEELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQSEF 402
++ ++ IRS + +DLF +L + +RS E EK +GP++ L EF
Sbjct: 347 DLLNDIQDTRDIIRSAYFVDLFLMLQNINTRSMPVEAVNELREEKLLMLGPVLERLNDEF 406
Query: 403 IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVV 462
+ +I R I+ +G LP + L++EY S + + Q++ V S + V V
Sbjct: 407 LDPLIDRAFAIMQRKGMLPPAPEVL--QGTALRIEYISVMAQAQKSIGVNSMERFVGFVG 464
Query: 463 ELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHL 522
G+ P +D +D D++ + +I EV+ IRQQR Q + ++ +
Sbjct: 465 --GMAQAKPEALDKLDIDKIIDSYGDSIGVSPSVIVPDEEVQKIRQQRAEQIQQQQQMQM 522
Query: 523 QQQLQQTSQDIGAK 536
Q +++D+
Sbjct: 523 AQAAVASAKDLSQA 536
>gi|226940462|ref|YP_002795536.1| Bbp21 [Laribacter hongkongensis HLHK9]
gi|226715389|gb|ACO74527.1| Bbp21 [Laribacter hongkongensis HLHK9]
Length = 555
Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats.
Identities = 128/559 (22%), Positives = 226/559 (40%), Gaps = 38/559 (6%)
Query: 1 MNQRSA-KDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLR---MWDT 48
M+ S K + R+ LK +R E++ +L P +N R ++D
Sbjct: 1 MDGPSIQKRVSARWEALKKERSSWMSHWSEISDYLLPRSGRFFVEDRNKGNKRHKNIYDN 60
Query: 49 TGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLF 108
TG+ A L++ + + +T P + W L S + S V+ W VT +
Sbjct: 61 TGTRALRVLAAGMMAGMTSPARPWFRLTTSDP--------QLDESAAVKAWLADVTRIMQ 112
Query: 109 GFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNH 168
++S L S Y + FGT + D + I + + ++ ++
Sbjct: 113 MVF--AKSNTYRALHSCYEELGAFGTAGTIVLPDFN-----GVIHHHVLTAGEFAIAADY 165
Query: 169 QNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALAR-NENERFTIIHAVYPKSLTDK-K 226
+ V+++YREF TV Q+V ++G S+ ++ R +E T+IHA+ P++ K +
Sbjct: 166 RGQVNTLYREFQMTVGQMVGEFGLSACSATVQRLHERWCLDEWITVIHAIEPRTDRHKGR 225
Query: 227 KDKGNKGFHSKFVSVD--ENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRR 284
+D N + S + E + E FP + R+ +IYG SPAME+L I++
Sbjct: 226 QDARNMAWRSVYFEPGNREGQVLRESGFREFPALCPRWSTSGGDIYGNSPAMESLGDIKQ 285
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG-NP 343
L Q PP S + R+ D PG ++ + + G +
Sbjct: 286 LQHEQLRKGQVIDYKTKPPLQVPSSMRARDIDTLPGGVSFVDAGTPNGGIRSAFEVGLDL 345
Query: 344 LPYHEELNRLKESIRSLFLLDLFQVLDDK--ASRSAAESMEKTREKGAFVGPLIGGLQSE 401
++ ++E I+ F DLF +L + +A E E+ EK +GP++ L +E
Sbjct: 346 SHLLADIQDVRERIKGSFYADLFLMLANGSNPQMTATEVAERHEEKLLMLGPVLERLHNE 405
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+ +I + G +P L VE+ S L + Q+A + S + V +
Sbjct: 406 ILDPLIEMTFSRMVEAGIVPPPPEELQGVD--LNVEFVSMLAQAQRAIATNSVDRFVGNL 463
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQH 521
V P +D D DR + LI V IRQQR ++ ++
Sbjct: 464 G--AVAGIKPEVLDKFDADRWADAYADMLGIDPELIVPGDRVALIRQQRAQAQQAQQQAA 521
Query: 522 LQQQLQQTSQDIGAKAAGR 540
+ Q +Q +G+ +
Sbjct: 522 MLQMGADAAQKLGSVDTSQ 540
>gi|212710818|ref|ZP_03318946.1| hypothetical protein PROVALCAL_01886 [Providencia alcalifaciens DSM
30120]
gi|212686515|gb|EEB46043.1| hypothetical protein PROVALCAL_01886 [Providencia alcalifaciens DSM
30120]
Length = 550
Score = 516 bits (1330), Expect = e-144, Method: Composition-based stats.
Identities = 132/551 (23%), Positives = 233/551 (42%), Gaps = 40/551 (7%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTTGSEAC 54
+D+ + + LKN+R +EL + P + ++ D +++
Sbjct: 4 KQDLLKQLSQLKNERQSFEPHWKELAEYTRPRSTRFSTSEVNRGDRRNTKIIDQEAAKSE 63
Query: 55 IKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERS 114
LSS + S IT P +KW LA + V+ W + V + +
Sbjct: 64 RTLSSGMMSGITSPARKWFRLATPDPDMMNY--------SPVKMWLEVVEQRMNEVF--N 113
Query: 115 RSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDS 174
RS L Y+ + F T + D E IR + P+ + Y++ VD+
Sbjct: 114 RSNIYQSLPQTYSDIGTFATSALAVLEDN-----ERVIRTVPFPIGSYYIANGPDLTVDT 168
Query: 175 VYREFTFTVDQIVSKWGDKVLSSKMKSALARNEN-ERFTIIHAVYPKSLT-DKKKDKGNK 232
+REF+ TV Q+V ++G +S ++KS + T+IH+VYP K D NK
Sbjct: 169 CFREFSMTVRQLVMEFGLDNVSEQVKSMWDSGNYSQWITVIHSVYPNLNRISGKLDAKNK 228
Query: 233 GFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRRLNETV 289
F S + + D +R E FP + R+ V +++YG S P M AL +++ L
Sbjct: 229 LFKSVYFEIGGDSDRVLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMIALGSVKALQLLQ 288
Query: 290 NELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQ--FGNPLPYH 347
AQ +PP A + K + L PG + ++ + + +P+ +
Sbjct: 289 RRKAQQIDKVTNPPMQAPASIKNQRISLVPGGITYLPMAGADQ-MIKPIFQVQADINGLI 347
Query: 348 EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQSEFIGA 405
++ + I+ + DLF +L + +RS +E EK +GP++ L SE +
Sbjct: 348 ADIGDTRNQIKEAYFSDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLQRLDSELLDK 407
Query: 406 MISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELG 465
+I+R I+ + LP LKVEY S + + Q++ V S + V V G
Sbjct: 408 LINRTFAIMARKNLLPVPPEEMQGMQ--LKVEYISVMAQAQKSVGVNSVERFVGFVG--G 463
Query: 466 VKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQ 525
+ P +D ++TD + + ++ +V IRQQR Q++ M++ + Q+
Sbjct: 464 LAKLKPEALDKLNTDEIIDNYAESIGISPTIVSSNDQVAAIRQQRAEQQQQMQQMQMAQE 523
Query: 526 LQQTSQDIGAK 536
+Q +G
Sbjct: 524 AVAGAQALGNT 534
>gi|268589375|ref|ZP_06123596.1| conserved hypothetical protein [Providencia rettgeri DSM 1131]
gi|291315402|gb|EFE55855.1| conserved hypothetical protein [Providencia rettgeri DSM 1131]
Length = 550
Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats.
Identities = 132/551 (23%), Positives = 233/551 (42%), Gaps = 40/551 (7%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTTGSEAC 54
+D+ + + LKN+R +EL + P + ++ D +++
Sbjct: 4 KQDLLKQLSQLKNERQSFEPHWKELAEYTRPRSTRFNTSEVNRGDRRNTKIIDQEAAKSE 63
Query: 55 IKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERS 114
LSS + S IT P +KW LA + V+ W + V + +
Sbjct: 64 RTLSSGMMSGITSPARKWFRLATPDPDMMNY--------SPVKMWLEVVEQRMNEVF--N 113
Query: 115 RSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDS 174
RS L Y+ + F T + D E IR + P+ + Y++ VD+
Sbjct: 114 RSNIYQSLPQTYSDIGTFATSALAVLEDN-----ERVIRTVPFPIGSYYIANGPDLTVDT 168
Query: 175 VYREFTFTVDQIVSKWGDKVLSSKMKSALARNEN-ERFTIIHAVYPKSLT-DKKKDKGNK 232
+REF+ TV Q+V ++G +S ++KS + T+IH+VYP K D NK
Sbjct: 169 CFREFSMTVRQLVMEFGLDKVSEQVKSLWDSGNYSQWITVIHSVYPNLNRISGKLDAKNK 228
Query: 233 GFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRRLNETV 289
F S + + D R E FP + R+ V +++YG S P M AL +++ L
Sbjct: 229 LFKSVYFEMGGDSERVLRESGFDEFPIMAPRWEVNGEDVYGSSCPGMIALGSVKALQLLQ 288
Query: 290 NELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQ--FGNPLPYH 347
AQ +PP A + K + L PG + ++ + + +P+ +
Sbjct: 289 RRKAQQIDKVTNPPMQAPASIKNQRISLVPGGITYLPMAGADQ-MIKPIFQVQADINGLI 347
Query: 348 EELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQSEFIGA 405
++ + I+ + DLF +L + +RS +E EK +GP++ L SE +
Sbjct: 348 ADIGDTRNQIKEAYFSDLFMMLQNINTRSMPVEAVIEMKEEKLLMLGPVLQRLDSELLDK 407
Query: 406 MISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELG 465
+I+R I+ + LP LKVEY S + + Q++ V+S + V V G
Sbjct: 408 LINRTFAIMARKNLLPVPPEEMQGMQ--LKVEYISVMAQAQKSVGVSSIERFVGFVG--G 463
Query: 466 VKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQ 525
+ P +D ++TD + + ++ +V IRQQR Q++ M++ + Q+
Sbjct: 464 LAQMKPEALDKLNTDEMIDNYAESIGVSPTIVSSNDQVAAIRQQRAEQQQQMQQMQMAQE 523
Query: 526 LQQTSQDIGAK 536
+Q +G
Sbjct: 524 AISGAQALGNT 534
>gi|85059667|ref|YP_455369.1| hypothetical protein SG1689 [Sodalis glossinidius str. 'morsitans']
gi|84780187|dbj|BAE74964.1| hypothetical phage protein [Sodalis glossinidius str. 'morsitans']
Length = 517
Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats.
Identities = 117/526 (22%), Positives = 204/526 (38%), Gaps = 45/526 (8%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNA--------------QLRMW 46
M++ + K I R + LK+ R E + YP + ++
Sbjct: 1 MDELAVKLI-TRADALKSHRQRHESVWSECYDYTYPLRGAGFSADVLDAQSAKSKVAKLL 59
Query: 47 DTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDT 106
D T +++ L+S L S +TP +W L ++ + + + W
Sbjct: 60 DGTATDSARMLASALMSGMTPANAQWLNL------------DCESLADEDKAWLSTCATL 107
Query: 107 LFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMS- 165
++ + F VV G Y+ DE E G + PLS Y++
Sbjct: 108 VW--ENIHAANFDAEGYEENLDVVCAGWFVLYI----DENREEGGYTFQQWPLSQCYVAS 161
Query: 166 VNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDK 225
+VD++YR + T +Q ++++G+ +S K++ A +++F +HA++P++
Sbjct: 162 TRKDGIVDTIYRCYQMTAEQAIAEFGEAGVSEKIRRAARDKPDDKFDFLHAIFPRTNYGV 221
Query: 226 KK-DKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRR 284
+ F S V R E FP V R+ YG P +ALP +
Sbjct: 222 NACLAKHLRFASFHVERQGKRIVRESGYHEFPVCVPRWMKIPGGAYGIGPVYDALPDCKE 281
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRN--FDLKPGYMNIGALSREGRSLFQPVQFGN 342
LNET L++ I+ + + P + + + + L F
Sbjct: 282 LNETKRMEKAAQDLAISGMWISEDDGVINPYSVKVGPRRIIVASSVNSMKPLLTGADFQV 341
Query: 343 PLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEF 402
+RL+ SIR + + D Q D A +A E + +GP+ G Q+E+
Sbjct: 342 AFTAE---DRLQASIRKIMMADQLQPQDGPA-MTATEVHVRVALIRQLLGPVYGRFQAEY 397
Query: 403 IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVV 462
+ ++ R I G P D+ + V Y SPL + Q+ E V + + V
Sbjct: 398 LQPLVERCFGIAFRAGVFPPPP--DSMQTAHFNVLYISPLARAQKLEDVTAVERLGANVA 455
Query: 463 ELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQ 508
+L P +D +DTD +R A PA +IR A+V +R
Sbjct: 456 QL--SQVSPEVVDLVDTDEATRVVADALGVPAKVIRSAADVTSLRD 499
>gi|330007155|ref|ZP_08305897.1| hypothetical protein HMPREF9538_03586 [Klebsiella sp. MS 92-3]
gi|328535502|gb|EGF61962.1| hypothetical protein HMPREF9538_03586 [Klebsiella sp. MS 92-3]
Length = 559
Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats.
Identities = 134/570 (23%), Positives = 228/570 (40%), Gaps = 42/570 (7%)
Query: 1 MNQRSAKD-IQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDT 48
M + S K LKN+R EL F+ P + R+ D
Sbjct: 1 MAELSPKQHYLKHLGQLKNERTSFEEHWRELAEFIDPRSTRFLTTERNNGSKRNTRIVDP 60
Query: 49 TGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLF 108
T S+A L S + S IT P + W LA + V+ W D V +
Sbjct: 61 TASKAARTLQSGMLSGITSPTRPWFKLATPDPEMMQY--------GPVKRWLDVVMTRMN 112
Query: 109 GFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNH 168
+RS L Y + FGT + D E+ IR +P+ + Y+S +H
Sbjct: 113 DVM--NRSNVYQSLPIIYRHLGVFGTAAMAVLEDD-----EDVIRTHPLPIGSYYLSNSH 165
Query: 169 QNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-RFTIIHAVYPKSLT-DKK 226
+ VD+ YR F+ T QIV ++G +S+ ++ A E F ++H P + K
Sbjct: 166 RLSVDTTYRVFSMTARQIVMQFGLDNVSNAVRGAWDNANYEAWFDVVHLTEPNIDRVNGK 225
Query: 227 KDKGNKGFHSKFVSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIR 283
+ NK F S + + D ++ E P + R+ + +++YG + P M AL T +
Sbjct: 226 LNSRNKAFKSVYFELSGDGDKLLREAGFDEPPILSPRWEINGEDVYGSNCPGMMALGTGK 285
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP 343
L A ++PP +A + K + +L PG + + L +P +P
Sbjct: 286 ALQLEQIRKANAIDKLVNPPMVAPTGLKNKLINLAPGGVTY-VDEVDATKLVRPAYAVSP 344
Query: 344 LPYHE--ELNRLKESIRSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQ 399
+ ++ I + F DLF + +RS EK +GP++ L
Sbjct: 345 QLNDMLGSIADDRQMIEACFFSDLFNLFSTINTRSMPVEAVAAMQDEKLLQLGPVLERLN 404
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVN 459
EF+ + R +I+ + PE LKVEY S L + Q++ ++S + V
Sbjct: 405 DEFLDPFVDRTFNIMARRNLFPEPPEELQGTP--LKVEYVSILAQAQKSIGISSVERFVG 462
Query: 460 TVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEE 519
V L +P+ +D ++ D+ PA ++ EV+ R+QR + +
Sbjct: 463 FVGNLA--KANPAALDKLNIDQTIDEYGNMLGVPATIVNSDDEVQATREQRAQMEQQQQM 520
Query: 520 QHLQQQLQQTSQDIG-AKAAGRAMEKKLTH 548
+ QQ T++ + A ++ K L+
Sbjct: 521 MAMAQQAGATAKTLSDTNTADPSLLKTLSD 550
>gi|85059164|ref|YP_454866.1| hypothetical protein SG1186 [Sodalis glossinidius str. 'morsitans']
gi|84779684|dbj|BAE74461.1| hypothetical phage protein [Sodalis glossinidius str. 'morsitans']
Length = 541
Score = 508 bits (1307), Expect = e-141, Method: Composition-based stats.
Identities = 118/526 (22%), Positives = 200/526 (38%), Gaps = 45/526 (8%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNA--------------QLRMW 46
M++ + K I R + LK+ R E + YP + ++
Sbjct: 1 MDELAVKLI-TRADTLKSHRQRHESVWRECYDYTYPLRGAGFSADVLDAQSAKSKVAKLL 59
Query: 47 DTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDT 106
D T +++ L+S L S +TP +W L + W
Sbjct: 60 DGTATDSARMLASALMSGMTPANAQWLNLDSESLP------------DDAKAWLSGCATL 107
Query: 107 LFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMS- 165
++ + F VV G Y+ DE E G + PLS Y++
Sbjct: 108 VW--ENIHAANFDAEGYEANLDVVCAGWFVLYI----DENREEGGYMFQQWPLSQCYVAS 161
Query: 166 VNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTD- 224
+VD++YR + T +Q ++++G+ +S K++ A +++F +HA++P+
Sbjct: 162 TRKDGIVDTIYRCYQMTAEQAIAEFGEAGVSEKIRRAAKDKPDDKFDFLHAIFPRKNYVV 221
Query: 225 KKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRR 284
+ + F S V R E FP V R+ + YG P +ALP +
Sbjct: 222 NARLAKHLRFASFHVERQGKRIVRESGYHEFPVCVPRWMKISGGAYGIGPVYDALPDCKE 281
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRN--FDLKPGYMNIGALSREGRSLFQPVQFGN 342
LNET L++ IA + + P + + + + L F
Sbjct: 282 LNETKRMEKAAQDLAISGMWIAEDDGVINPYSVKVGPRRIIVASSVNSMKPLLTGADFHV 341
Query: 343 PLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEF 402
+RL+ SIR + + D Q D A +A E + +GP+ G Q+E+
Sbjct: 342 AFTAE---DRLQASIRKIMMADQLQPQDGPA-MTATEVHVRVALIRQLLGPVYGRFQAEY 397
Query: 403 IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVV 462
+ ++ R I G P D+ + V Y SPL + Q+ E V + + V
Sbjct: 398 LQPLVERCFGIAFRAGVFPAPP--DSMQTAHFNVRYISPLARAQKLEDVTAIERLGANVA 455
Query: 463 ELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQ 508
+L P +D +DTD R A PA +IR A+V +R
Sbjct: 456 QL--SQVSPEVVDLVDTDEAMRVVADALGVPAKVIRSAADVTSLRD 499
>gi|332160969|ref|YP_004297546.1| hypothetical protein YE105_C1347 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665199|gb|ADZ41843.1| Hypothetical phage protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862125|emb|CBX72289.1| hypothetical protein YEW_AK02260 [Yersinia enterocolitica W22703]
Length = 534
Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats.
Identities = 119/526 (22%), Positives = 206/526 (39%), Gaps = 45/526 (8%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNA--------------QLRMW 46
M+ +A+ + R + LK R E + YP + + R+
Sbjct: 1 MDDTAARLV-KRVSSLKAARQLHESVWRECYDYTYPLRGSGFSTEVLDAQSAKSKVARLL 59
Query: 47 DTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDT 106
D T +++ L+S L S +TP +W L + S R W
Sbjct: 60 DGTATDSARILASALMSGMTPANAQWLDLGS------------ENLSDDERSWLSTC--A 105
Query: 107 LFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSV 166
+ + F VV G Y++ D + G + PL+ V+++
Sbjct: 106 TLTWENIHAANFDAEGYEANIDVVCAGWFALYVDED----TEQGGYTFNQWPLAQVFVAS 161
Query: 167 NHQ-NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKS-LTD 224
+ + VV++VYR + T +Q V ++G +S K++ A + +++F IHA++P+
Sbjct: 162 SRRDGVVNTVYRCYQLTAEQAVKEFGRDNVSHKIQDAANKKPDDKFEFIHAIFPRDGYIG 221
Query: 225 KKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRR 284
+ N F S V V E + E FP V R+ YG P +ALP +
Sbjct: 222 NARLAKNLPFASFNVEVAEKKVVRESGYHEFPVCVPRWMKIPGTPYGVGPVYDALPDCKE 281
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEA--KQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
LNET L++ IA + R ++ P + + + L F
Sbjct: 282 LNETKRMEKAAQDLAIAGMWIAEDDGVLNPRTVNVGPRKIIVANSVNSMKPLLTGADFNV 341
Query: 343 PLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEF 402
E RL+ IR + + D Q D A +A E + +GP+ G Q+E+
Sbjct: 342 AFTAEE---RLQAQIRKILMADQLQPQDGPA-MTATEVHVRVALIRQLLGPVYGRFQAEY 397
Query: 403 IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVV 462
+ ++ R I G P+ + + + Y SPL + Q+ E V + + +
Sbjct: 398 LQPLVERCFGIAFRAGVFPQMPESMA--QANFNIRYISPLARAQKLEDVTAIERLGANIA 455
Query: 463 ELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQ 508
+L +P +D+MD D +R A PA ++R A+V +R
Sbjct: 456 QLAAI--NPEVIDNMDADAAARVVSDALGVPAKVLRSAADVTALRD 499
>gi|262043408|ref|ZP_06016533.1| hypothetical protein HMPREF0484_3551 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039234|gb|EEW40380.1| hypothetical protein HMPREF0484_3551 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 515
Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats.
Identities = 118/522 (22%), Positives = 192/522 (36%), Gaps = 45/522 (8%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQ--------------LRMW 46
M++ + K + R + LK R E + YP + R+
Sbjct: 1 MDELAVKLV-KRADTLKANRQVHESVWRECYDYTYPLRGAGLSDEVLDAQSAKSKVARLL 59
Query: 47 DTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDT 106
D T +++ L+S L S +TP +W L W
Sbjct: 60 DGTATDSARMLASALMSGMTPANAQWLNLDSESLP------------DDAAAWLSTCATL 107
Query: 107 LFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYM-S 165
++ + F VV G Y++ D E G + PL+ Y+ S
Sbjct: 108 VW--ENIHAANFDAEGYEANLDVVCAGWFALYIDED----REEGGFSFQQWPLAQCYVTS 161
Query: 166 VNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTD- 224
+VD++YR + T +Q + ++G +S K+ A A+ +++F +H ++P+
Sbjct: 162 TRRDGIVDTIYRRYQLTAEQAIKEFGADKVSKKISDAAAKKPDDKFEFLHCIFPRENYVV 221
Query: 225 KKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRR 284
+ N F S V V E FP V R+ YG P +ALP +
Sbjct: 222 NARLAKNLRFASYNVEVSGKLIVRESGYHEFPCCVPRWMKIPGTPYGIGPVYDALPDCKE 281
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEA--KQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
LNET L++ IA + R + P + + + L F
Sbjct: 282 LNETKRMEKAAQDLAIAGMWIAEDDGVLNPRTVKVGPRRIIVANSVDSMKPLLTGADFNV 341
Query: 343 PLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEF 402
E RL+ SIR + + D Q D A +A E + +GP+ G Q+E+
Sbjct: 342 AFTAEE---RLQASIRKIMMADQLQPQDGPA-MTATEVHVRVALIRQLLGPVYGRFQAEY 397
Query: 403 IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVV 462
+ ++ R + G P + + V Y SPL + QQ E+V + + V
Sbjct: 398 LQPLVERCFGLAFRAGVFPPAPESL--QNANFNVRYISPLARAQQLENVTAIERLGANVA 455
Query: 463 ELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVE 504
L P D +DTD +R A PA +IR + VE
Sbjct: 456 NLA--QVSPDVTDLVDTDEATRVIADALGVPAKVIRSSDAVE 495
>gi|218886173|ref|YP_002435494.1| hypothetical protein DvMF_1072 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757127|gb|ACL08026.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 595
Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats.
Identities = 128/548 (23%), Positives = 220/548 (40%), Gaps = 59/548 (10%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN-------------------- 40
M + +D ++ ++L+ QR ++ ++ P +
Sbjct: 1 MTSQRLRDAREAVDFLERQRSPWEEAWRDIAAYVLPRRGRMHGRDPLGASAPGAVGGSSG 60
Query: 41 ----------AQLRMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKED 90
R+ D T + A L++ + +T P + W L + A D
Sbjct: 61 VSGTHRSTDMRGGRVIDATATRAVRILAAGMQGGLTSPARPWFRLRLADGA--------D 112
Query: 91 ARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEE 150
A S R W D V L+ +RS F + YT + FG+ Y E D E
Sbjct: 113 AESGPARRWLDAVEQRLYW--ALARSNFYQASHALYTELAAFGSADLYQEVDP-----ER 165
Query: 151 GIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENER 210
R+ ++ + + VD+V R T Q+ ++G+ LS+ + L + N
Sbjct: 166 LTRFAALTCGEFSWACDAAGRVDTVARRMLMTARQLAERYGEAHLSTGTRRMLRKEPNRH 225
Query: 211 FTIIHAVYPKSLTDKKKDKG-NKGFHSKFVSVDE--NRFFEEKQIATFPYIVGRYRVRAD 267
++H V P+++ G + F S D E FP++ R+ V
Sbjct: 226 VEVVHLVRPRAVRTPGHGSGLHMPFESLVFEADGAAGDLLHEGGFEEFPHLAARWDVTGS 285
Query: 268 EIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGAL 327
++YGRSP M+ LP ++ L E ++PP + KQR +L PG N A
Sbjct: 286 DVYGRSPGMDVLPDVKMLQEMARSQLLAIHKVVNPPMRVPTGFKQR-LNLIPGAQNYVAP 344
Query: 328 SREGRSLFQPVQFGNP--LPYHEELNRLKESIRSLFLLDLFQVL--DDKASRSAAESMEK 383
+ P+ NP +++ +++++R F DLF + D +++ +AAE E+
Sbjct: 345 GQ--PEAVAPLYQINPDIAAVTRKIDDVRKAVREGFFNDLFLMFTADGRSNVTAAEVAER 402
Query: 384 TREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLF 443
+EK +GP+I Q+E + +++R IL G LP ++VEY S L
Sbjct: 403 GQEKLLMLGPVIERHQTELLDPLLTRTYGILRRAGALPPNPPELEGLE--MRVEYVSALA 460
Query: 444 KYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEV 503
+ Q+ + S Q V L P +D +D D+ PA ++R AEV
Sbjct: 461 QAQRLGAAQSIRQFAAEVTALSATA--PGVLDKIDFDQAVDELASIGGVPARVVRSDAEV 518
Query: 504 EDIRQQRE 511
+R +RE
Sbjct: 519 LRLRAERE 526
>gi|212703348|ref|ZP_03311476.1| hypothetical protein DESPIG_01391 [Desulfovibrio piger ATCC 29098]
gi|212673194|gb|EEB33677.1| hypothetical protein DESPIG_01391 [Desulfovibrio piger ATCC 29098]
Length = 611
Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats.
Identities = 121/566 (21%), Positives = 226/566 (39%), Gaps = 37/566 (6%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNA----------QLRMWDTTGSEACI 55
+ R+ L +R + E L P + + D TG A
Sbjct: 38 VPALARRYRALLERRSPWDTAWESLAEHFLPTRFRTDDSLDDRPLLNRSLVDATGILAMR 97
Query: 56 KLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSR 115
L++ L +T P + W LA + +RS + + D+V + + R
Sbjct: 98 TLAAGLQGGMTSPARPWFRLALDDP--------DLSRSHAGQRYLDEVEARMRVVLQ--R 147
Query: 116 SGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSV 175
F + + Y + FGT + AD L G R++ + + + VD+V
Sbjct: 148 CNFYNAMHTIYAELGTFGTAFVFELAD-----LRHGFRFVPLCAGQYVLDTDAARRVDTV 202
Query: 176 YREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKK-KDKGNKGF 234
+ ++ Q+V +G + L ++ A R ++R +IHAV P++ + + +
Sbjct: 203 FHRMHMSLRQMVQSFGPEALPENLRLAARRTPDQRHAVIHAVLPRTERRPRLAGPCHMPW 262
Query: 235 HSKFVSVDEN---RFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNE 291
S + +E FP R+ V A+++YGRSPAM+ALP R L +
Sbjct: 263 ASVYWLEGREGQVVPLKESGFMGFPGFGPRWDVAANDVYGRSPAMDALPDCRMLQQMGIT 322
Query: 292 LAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMN-IGALSREGRSLFQPVQFGNPLPYHEE- 349
+ ++ PP + + DL PG +N + +L + + + P+ P
Sbjct: 323 TLKAIHKAVDPPMSVHAGLRSVGLDLTPGGINFVDSLPGQNQPVATPLLQVKPDLAQARS 382
Query: 350 -LNRLKESIRSLFLLDLF-QVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
+ +++ IR+ DLF +L+ ++ +A+E + EK +GP++ L E + +I
Sbjct: 383 AMEAVQQQIRAGLYNDLFRLILEGRSKVTASEIAAREEEKLLLIGPVLERLHDELLIPLI 442
Query: 408 SRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVK 467
R ++ + LP C + LKVE+ S L + Q+ +++ Q + + L
Sbjct: 443 DRTFRLMLALDMLPPCPPELSG--RHLKVEFVSLLAQAQKLVGISATDQYL--ALTLKAA 498
Query: 468 TGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQ 527
+ P +D +D D + + P L R E +R RE R+ ++ L Q+
Sbjct: 499 SAWPEALDSVDVDNLLDNYAESLGLPVNLTRPREERARLRAGREEARQTEQQLALLQKAA 558
Query: 528 QTSQDIGAKAAGRAMEKKLTHDMMEN 553
+ EK ++ N
Sbjct: 559 DLGHTLADSDLTVEGEKSSVLQVLAN 584
>gi|295096867|emb|CBK85957.1| Bacteriophage head to tail connecting protein [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 541
Score = 488 bits (1256), Expect = e-135, Method: Composition-based stats.
Identities = 117/526 (22%), Positives = 198/526 (37%), Gaps = 45/526 (8%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNA--------------QLRMW 46
M++ + K I R + LK R + E + YP + ++
Sbjct: 1 MDELAVKLI-KRSDTLKANRQQHESVWRECYDYTYPLRGAGFSDEVLDAQSAKHKVAKLL 59
Query: 47 DTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDT 106
D T +++ L+S L S +TP +W L + W +
Sbjct: 60 DGTATDSARMLASALMSGMTPANAQWLNLDSESLP------------DDAKAWLSECATL 107
Query: 107 LFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYM-S 165
++ + F VV G Y++ D E G + PL+ Y+ S
Sbjct: 108 VW--ENIHAANFDAEGYEANLDVVCAGWFVLYIDED----REEGGYTFQQWPLAQCYVTS 161
Query: 166 VNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTD- 224
+VD++YR + T +Q + ++G +S K++ A + +++F +H ++P+
Sbjct: 162 TRKDGIVDTIYRRYQLTAEQAIKEFGADKVSEKIRDAAKKKADDKFDFLHCIFPRETYMV 221
Query: 225 KKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRR 284
+ N F S V V + E FP V R+ YG P +ALP +
Sbjct: 222 DARLAKNMRFASYNVDVSNKQIVRESGYHEFPCCVPRWMKIPGGSYGIGPVYDALPDCKE 281
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEA--KQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
LNET L++ IA + R + P + + + L F
Sbjct: 282 LNETKRMEKAAQDLAISGMWIAEDDGVLNPRTVKVGPRRIIVANSVDSMKPLLTGSDFSV 341
Query: 343 PLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEF 402
E RL+ SIR + + D Q D A +A E + +GP+ G Q+E+
Sbjct: 342 AFTAEE---RLQASIRKIMMADQLQPQDGPA-MTATEVHVRVALIRQLLGPVYGRFQAEY 397
Query: 403 IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVV 462
+ ++ R I G + + V Y SPL + Q+ E V + + V
Sbjct: 398 LQLLVVRCFGIAFRAGIFSPPPESL--QNANFNVRYISPLARAQKLEDVTAIERLGANVA 455
Query: 463 ELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQ 508
L + D +D +DTD +R A PA +IR + V D+R
Sbjct: 456 NLAGISQD--VVDLIDTDEATRVVADALGVPAKVIRSSDAVADLRD 499
>gi|303257564|ref|ZP_07343576.1| conserved hypothetical protein [Burkholderiales bacterium 1_1_47]
gi|302859534|gb|EFL82613.1| conserved hypothetical protein [Burkholderiales bacterium 1_1_47]
Length = 548
Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats.
Identities = 114/560 (20%), Positives = 222/560 (39%), Gaps = 35/560 (6%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYP-----------YKNNAQLRMWDTTGSEAC 54
K I RF LK +R ++ + P + ++ D +
Sbjct: 5 IKLINQRFESLKQERSSWEDLWRDIRDYCLPDLGCFPGEDATQGSKRYRKILDAEAIDCA 64
Query: 55 IKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERS 114
L++ L ++ P + W L + + ++ V+EW +V D L S
Sbjct: 65 DVLAAGLLGGVSSPSRPWLRLTT--------MDPDLDKNPAVKEWMTKVQDLL--LLYFS 114
Query: 115 RSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDS 174
++ L Y + FGT C ++ E+ I ++ + +++ + VD+
Sbjct: 115 KAECYNALHQSYLELPVFGTACTIVKPHP-----EQLISLQNLTIGEYWLAEDDYGKVDT 169
Query: 175 VYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDK-KKDKGNKG 233
+YR + T Q+V +WG + +++ ++ A ++ RF +IHA+ P+ + K+D N
Sbjct: 170 MYRRLSLTAKQMVQQWGFEAVNNDVRQAFEKDPFTRFNVIHAIEPRIERNPDKRDNKNMP 229
Query: 234 FHSKFVSVD-ENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNEL 292
+ S + +++ E FP + R+ +YGR P +AL + L L
Sbjct: 230 WQSVYFQEGVQDKVLSESGFRNFPALCPRWMTSGGSVYGRGPGAKALSAQKSLQRLHLRL 289
Query: 293 AQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNR 352
A+ PP + S K + KPG +P +
Sbjct: 290 AELVDYGTRPPILYPSTLKDQLSQFKPGGRVAVNPQEAPIIRSMWEVRTDPQAMLALIQS 349
Query: 353 LKESIRSLFLLDLFQVLDDKAS---RSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISR 409
++ I+ +F +++FQ++ A+ R+A E +EK +GP++ L +E + +++
Sbjct: 350 TRQDIQRIFFVNVFQMIAATANQTDRTATEVQALEQEKVMMLGPVLERLHTELLDPLVTN 409
Query: 410 ELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTG 469
+ LPE L +EY S L + Q+ S ++ + L
Sbjct: 410 AFGFMVEYNMLPEVPEELYGRE--LSIEYVSVLAEAQKNASANGIVRTAQQIGLLA--QI 465
Query: 470 DPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQT 529
+P +D +D D P LI +V IRQQR Q++ + QQ +
Sbjct: 466 NPQAVDKLDVDATIDQLADMNGVPPSLIVTGQKVALIRQQRAEQQQAQMQAAQLQQAMTS 525
Query: 530 SQDIGAKAAGRAMEKKLTHD 549
+D+G A + +++ + +
Sbjct: 526 LKDLGQAADSQGLQEAFSEE 545
>gi|298485985|ref|ZP_07004059.1| hypothetical protein PSA3335_1414 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298159462|gb|EFI00509.1| hypothetical protein PSA3335_1414 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 533
Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats.
Identities = 136/523 (26%), Positives = 212/523 (40%), Gaps = 42/523 (8%)
Query: 5 SAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNA--------------QLRMWDTTG 50
+A I + LK+ R + YP + + + RM D T
Sbjct: 3 TAAQICKTLSTLKSLRSPHESVWRDCFDHSYPIRGSGFCIEQITAMEAQMRKARMIDGTT 62
Query: 51 SEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGF 110
++A LSS + S +TP W G+ S + R W D D L+
Sbjct: 63 TDAARILSSGIMSGLTPANSLWFGM------------DVGQESDEERRWLDGSADILW-- 108
Query: 111 RERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVN-HQ 169
+ S F T VV G Y++ D+ + G + P+++VY S +
Sbjct: 109 QNIHASNFDAAAFEGLTDVVCAGWFALYIDQDM----EKGGFTFDLWPIASVYCSASKAG 164
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTD-KKKD 228
+D+VYR + T +Q V+++G+ LS + E IHA+YP++ +
Sbjct: 165 GKIDTVYRTYKLTAEQAVNEFGEDNLSETTRKLAKEKPQELVEFIHAIYPRTTHMVGARL 224
Query: 229 KGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNET 288
N S V V E P +V R+ + D +Y P +ALP R LNE
Sbjct: 225 AKNMPVASCKVEVAAKTLVSESGYHEMPVVVPRWMMIPDSVYAVGPVFDALPDSRTLNEL 284
Query: 289 VNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHE 348
G L++ IA + +K G I + +P+Q G+ Y E
Sbjct: 285 CRMDLAAGDLAIAGMWIAEDDGVLNPRTVKVGPRKI--IVANSVDSMKPLQSGSNFQYAE 342
Query: 349 -ELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
++ RL+ SIR + + D Q D A +A E + +GP+ G LQ+E++ MI
Sbjct: 343 TKIARLQGSIRKILMADQLQAQDGPA-MTATEVHVRVNLIRQLLGPVYGRLQTEYLQPMI 401
Query: 408 SRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVK 467
R I G L + + V Y SPL + Q+ E V++ Q V L V
Sbjct: 402 ERCFGIAYRAGVLGQAPESLAGRD--FTVRYLSPLARSQKLEEVSAIDQFVQ--GALIVA 457
Query: 468 TGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQR 510
DPS MD++D D RF A P+ +IR A+ + +R+ R
Sbjct: 458 QADPSVMDNIDMDEAQRFKGEALGVPSSVIRSKADRDKLREDR 500
>gi|227355860|ref|ZP_03840253.1| tail protein [Proteus mirabilis ATCC 29906]
gi|227164179|gb|EEI49076.1| tail protein [Proteus mirabilis ATCC 29906]
Length = 554
Score = 484 bits (1247), Expect = e-134, Method: Composition-based stats.
Identities = 128/539 (23%), Positives = 221/539 (41%), Gaps = 41/539 (7%)
Query: 17 KNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTTGSEACIKLSSLLSSLI 65
+ +R EL+ F P + ++ D T S A LSS + S I
Sbjct: 17 ETERSSFEPHWRELSDFTRPRSTRFTASDVNRGDRRNSKIIDPTASLASSVLSSGMMSGI 76
Query: 66 TPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQSF 125
T P + W LA + V+ W + + +RS L
Sbjct: 77 TSPARPWFRLATPDPDLMDY--------GPVKLWLETTEQRMNEVF--NRSNLYQSLPLM 126
Query: 126 YTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVDQ 185
Y + FGT + D + IR + PL + Y++ + VD YR+FT TV Q
Sbjct: 127 YGDLGTFGTAAMAVVEDS-----QRIIRTVHFPLGSYYIANSPSLSVDVCYRKFTMTVRQ 181
Query: 186 IVSKWGDKVLSSKMKSALARNEN-ERFTIIHAVYPKSLTDK-KKDKGNKGFHSKFVSVDE 243
+V ++G +S +KS ++ + ++HAVYP K + +K F S ++ V
Sbjct: 182 LVMEFGVDSVSDTVKSMWNSSQYSQWIEVVHAVYPNLERQTGKLEAKHKPFKSVYLEVAG 241
Query: 244 NR--FFEEKQIATFPYIVGRYRVRADEIYGRS-PAMEALPTIRRLNETVNELAQFGRLSL 300
+ E FP + R+ V +++YG S P M AL + L AQ
Sbjct: 242 DHEKVLRESGYDEFPIMAPRWEVNGEDVYGSSCPGMLALGGTKALQLMQKRKAQMIDKLT 301
Query: 301 HPPTIAVSEAKQRNFDLKPGYMNI---GALSREGRSLFQPVQFGNPLPYHEELNRLKESI 357
+PP + K + + PG +N + + +++F VQ E++ ++ I
Sbjct: 302 NPPLQVPASLKNQRVNTIPGGINYLDEANPTNKIQTIF-DVQPVALKALLEDVQDTRQLI 360
Query: 358 RSLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILD 415
+ + +DLF+++ +RS +E EK +GP++ L SE + +I+R IL
Sbjct: 361 DTAYFVDLFRMMQMVNTRSMPIEAVVEMREEKLLQLGPVLQRLDSELLDKLINRTFSILV 420
Query: 416 SQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMD 475
++ LP D LKVEY S + + Q++ V S + V L P +D
Sbjct: 421 NKNLLPVAP--DEMQGMDLKVEYISVMAQAQKSIGVGSIERFAGFVGNLAKV--KPEALD 476
Query: 476 HMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIG 534
++ D A ++ +V+ IRQQR+ Q++ M + + Q ++ +
Sbjct: 477 KLNADDAIDNYASAIGVSPTIVATNEQVQAIRQQRQAQQQQMAQMQMAQSAIDGAKTLS 535
>gi|291336934|gb|ADD96462.1| hypothetical protein ALOHA_HF400048F7ctg1g11 [uncultured organism
MedDCM-OCT-S09-C787]
Length = 450
Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats.
Identities = 106/462 (22%), Positives = 208/462 (45%), Gaps = 28/462 (6%)
Query: 38 KNNAQLR---MWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSK 94
++ R ++D + ++ L++ L ++T P W L F +
Sbjct: 12 RSKGDKRTELIFDGSPLQSVELLAASLHGMLTNPSTPWFSLR--------FKQNDMENED 63
Query: 95 KVREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRY 154
+ +EW + T+ ++ ++S F + Y ++ FGT ++E D E+ +++
Sbjct: 64 EAKEWLEDATEVMYSAF--NKSNFQQEIFELYHDLITFGTAAMFIEEDD-----EDILKF 116
Query: 155 ISVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTII 214
+ ++ ++++ N + +D+V+R+F+ + ++ K+GD +S + + ++ E I+
Sbjct: 117 STRHINEIFIAENDKGRIDTVFRKFSLSARAVMQKFGD--VSINIATKAKKDPYEEVEIM 174
Query: 215 HAVYPKSLTDKKK-DKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRS 273
HAVYP+S D +K DK N F S ++ + FP++V RY + EIYGRS
Sbjct: 175 HAVYPRSDFDPRKQDKENMPFESVYLDAESGDELSVSGFREFPFVVPRYLKASHEIYGRS 234
Query: 274 PAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRS 333
PAM ALP ++ LNE + + + PP + + PG +N R
Sbjct: 235 PAMTALPDVKMLNEMSKTTIKSAQKQVDPPLLVPDDGFMLPVRTIPGGLNFYRAGTRDRI 294
Query: 334 LFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGP 393
+ PL + E R + SIR+ F ++ + +A E +++ EK +GP
Sbjct: 295 ETLNIGANTPLGLNMEEQR-RNSIRNAFYVNQLMMQSG-PQMTATEVIQRNEEKMRLLGP 352
Query: 394 LIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVAS 453
++G LQSE + +I R ++ + +++EY SPL K Q++ ++S
Sbjct: 353 VLGRLQSELLKPLIDRTFALILRKNLFRPAPEFLAGQD--IEIEYVSPLAKAQKSTELSS 410
Query: 454 ALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAV 495
++ + + L DH++ D++ R P
Sbjct: 411 IMRAIEILGSLSNVA---PVFDHINMDKLVRHLADIVGVPQK 449
>gi|220903991|ref|YP_002479303.1| hypothetical protein Ddes_0717 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868290|gb|ACL48625.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 597
Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats.
Identities = 122/551 (22%), Positives = 213/551 (38%), Gaps = 40/551 (7%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLR-------------MWDTTGSE 52
+ R+ L +R + + L P + + + + D TG
Sbjct: 5 IPVLARRYQALLRRRMPWDTAWQSLADHFLPTRCRLRPQGGGAEEGPMLNSGLVDATGIL 64
Query: 53 ACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRE 112
A L++ L +T P + W L + ARS+ + W D+V +
Sbjct: 65 AMRTLAAGLQGGLTSPARPWFRLG--------LDDADLARSRPGQAWLDEVAARMRSVF- 115
Query: 113 RSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV 172
R F + + Y + FGT + AD +G R++ + + + V
Sbjct: 116 -HRCNFYNAMHTLYAELATFGTAFVFELADP-----RDGFRFMPLCAGEYVLDCDAGRRV 169
Query: 173 DSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKK-KDKGN 231
D+V+R + ++ QIV +G L ++ A+ RN +ER +I AVYP+ +
Sbjct: 170 DTVFRRSSMSLRQIVQTFGPAALPESLREAVRRNADERRNVIQAVYPRDDRIHGILTASH 229
Query: 232 KGFHSKFVSVDEN---RFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNET 288
S + + E FP R+ V +++YGRSPAM+ALP R L +
Sbjct: 230 MPVASVYWLEGRDGGEHALRESGFRHFPGFGPRWDVAGNDVYGRSPAMDALPDCRMLQQM 289
Query: 289 VNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNI-GALSREGRSLFQPVQFGNPLPYH 347
+ ++ PP + + DL PG +N + + P+ NP
Sbjct: 290 GITTLKAIHKAVDPPMSVSAGLRSVGLDLTPGGINYVDSAPGQSPQAATPLLQVNPDLST 349
Query: 348 EE--LNRLKESIRSLFLLDLF-QVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIG 404
+ ++ IRS DLF +L+ ++ +A+E + EK +GP++ L E
Sbjct: 350 ARRAMESVQNQIRSGLYNDLFKLILEGRSGVTASEIAAREEEKLVLIGPVLERLHDELFI 409
Query: 405 AMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVEL 464
++ R + + LP C + LKVE+ S L + Q+ V++A Q + + L
Sbjct: 410 PLMDRTFECMRELDMLPPCPPELSG--RRLKVEFVSLLAQAQKLVGVSAADQYL--ALTL 465
Query: 465 GVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQ 524
T P +D ++ D + + P L R E E +R R R +
Sbjct: 466 RASTAWPEALDTLNVDHLLDNYADSLGLPISLTRPPEEREQMRAARAEAARGAALADSLK 525
Query: 525 QLQQTSQDIGA 535
Q Q +
Sbjct: 526 QGVDLVQQLAK 536
>gi|317152045|ref|YP_004120093.1| Bacteriophage head-to-tail connecting protein [Desulfovibrio
aespoeensis Aspo-2]
gi|316942296|gb|ADU61347.1| Bacteriophage head-to-tail connecting protein [Desulfovibrio
aespoeensis Aspo-2]
Length = 603
Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats.
Identities = 130/526 (24%), Positives = 210/526 (39%), Gaps = 33/526 (6%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN-------------AQLRMWDT 48
+ A+ +Q RF L+ R EL+ ++ P KN+ R++D+
Sbjct: 3 AKELARSLQTRFKGLEEARQPWLAAWRELSDYMLPRKNSFTGIDPGSTRGRSGDERIFDS 62
Query: 49 TGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLF 108
T S A L+S L L+T P W + + VR + Q + +
Sbjct: 63 TPSHALELLASSLGGLLTNPAMPWFDIRARDP--------DQGDGAGVRTFLQQARERMI 114
Query: 109 GFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNH 168
+GF + Y V GT Y+EAD D +R+ + PL VY + +
Sbjct: 115 ALFNTEDTGFQTNVHELYLDVALLGTAVMYVEADPD-----TVVRFCTRPLGEVYAAESA 169
Query: 169 QNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKK- 227
+ VDSVYR +T + Q +WG S + + ++ I+HAV+P++ D
Sbjct: 170 RGAVDSVYRRYTLSARQTAREWG-AACSGETRRKAEERPDDTVEILHAVFPRTDRDPYGV 228
Query: 228 DKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNE 287
+ F S +V EE PY+V R+ A E YGR P AL R LN
Sbjct: 229 GAAHFPFASVYVETGAEHVLEESGYLEMPYLVPRWAKAAGETYGRGPGQTALSDTRVLNA 288
Query: 288 TVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYH 347
PP + + PG ++ R PV +
Sbjct: 289 MARTALMAAEKMSDPPLMVPDDGFLGPVHSGPGGLSYYRAGSPDRIEPLPVN-VDLAATE 347
Query: 348 EELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
+ + +ESIR +FL D + + +A E++ + EK +GP++G LQ+EF+ +I
Sbjct: 348 TMMQQRRESIRRIFLGDQLTP--EGPAVTATEALIRQSEKMRVLGPVLGRLQAEFLSPLI 405
Query: 408 SRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVK 467
R I+ G LP P ++V YTSP+ + Q+ + + + L
Sbjct: 406 RRVFRIMLRAGALPPFPQGFGPDD--IEVRYTSPVARAQKEFEARGLSRTMEYLAPLVGA 463
Query: 468 TGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQ 513
+ MD+ DTDR +R TP+ +R +V + R +
Sbjct: 464 SDPFGIMDNFDTDRAARHVAELFGTPSDYLRPEKDVAETRAAKGRA 509
>gi|167032756|ref|YP_001667987.1| putative tail protein [Pseudomonas putida GB-1]
gi|166859244|gb|ABY97651.1| putative tail protein [Pseudomonas putida GB-1]
Length = 564
Score = 475 bits (1222), Expect = e-131, Method: Composition-based stats.
Identities = 109/535 (20%), Positives = 203/535 (37%), Gaps = 51/535 (9%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTTGSEAC 54
K + R + LK +R + +E++ F+ P + + ++ + + A
Sbjct: 7 RKLAEKRLSALKTERSSWDTNAKEISDFILPMRSRVMCDDTNRGDRRNNKIINNRATMAS 66
Query: 55 IKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERS 114
+S + S IT P + W LA A F V+ W + T +
Sbjct: 67 RTTASGMMSGITSPARPWFNLAPVARAIMEF--------GPVKSWFYECTQRMRDVFL-- 116
Query: 115 RSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDS 174
RS L + Y + FGTGC +++ D IR + Y+S +
Sbjct: 117 RSNLYQVLPTCYQEMATFGTGCIWVDEHPD-----TVIRCEAFTWGEYYISNGADGRAAA 171
Query: 175 VYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTII-HAVYPKSLTDK-KKDKGNK 232
+YREF +TV+Q+V ++G + LS K+ N ++F V + + N
Sbjct: 172 IYREFKWTVNQLVQEFGVEALSPSSKALYENNNGDQFISCAQRVELNMNANPDRAGSRNL 231
Query: 233 GFHSKFVSVD--ENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVN 290
F + + E++ FP + R+ + YG P L ++ L
Sbjct: 232 PFSALTWEAGAPGDMVLEDRGYHEFPAMAVRWESMPGDAYGTGPGRICLGDVKALQLYER 291
Query: 291 ELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGAL---SREGRSLFQPVQFGNPLPYH 347
+ A+ +PP A E K + PG + + + ++QP P
Sbjct: 292 QAARMTETGANPPLQAPVELKGQPSSTIPGGVTYVPMVGGQNQMAPIYQP-NAAWLSPIQ 350
Query: 348 EELNRLKESIRSLFLLDLFQVLDD-KASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAM 406
++ + I F +DLF ++ R+A E + EK +GP++ + E + +
Sbjct: 351 AKIQEHEGRINEAFFVDLFLMVSQLDTVRTATEIAARKEEKMLMLGPVLERINDELLDPL 410
Query: 407 ISRELDILDSQGNLPECEGADNPPV-------------SLLKVEYTSPLFKYQQAESVAS 453
I R +I+ Q ++P G + S ++ EY S L + Q++++V
Sbjct: 411 IDRTFNIMLRQ-SIPIWAGIIDGDPLLPPPPEELINANSEIQAEYVSILAQAQKSQNVLG 469
Query: 454 ALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQ 508
+ L P +D +++D++ A ++R EV IR+
Sbjct: 470 LERFATLAGNLSGAF--PEVLDKVNSDQLIEEYADAIGVIPTVVRGADEVAAIRE 522
>gi|78357592|ref|YP_389041.1| hypothetical protein Dde_2550 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219997|gb|ABB39346.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 549
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 125/547 (22%), Positives = 229/547 (41%), Gaps = 44/547 (8%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLY---------------PYKNNAQLRM 45
M+ + ++ + Y+++QRGE + E+ ++ P Q R+
Sbjct: 1 MSISTLEEARGAAAYIESQRGEWDSRWREVADYVTGAGYGGGSWQEGTARPEGRRGQ-RI 59
Query: 46 WDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTD 105
D T + A L++ L +TPP + W L + S +VR W D V
Sbjct: 60 IDATATRALRVLAAGLQGGLTPPARPWFRLR--------LADRGLMESAEVRRWLDDVEA 111
Query: 106 TLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMS 165
L+ + S F + +T++ +G+ YMEAD + +R+ VP + +
Sbjct: 112 ALYA--ALAGSNFYQNSHALFTALAAYGSADMYMEADP-----QRVMRFCVVPHGDFAWA 164
Query: 166 VNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDK 225
+ VD+V R F+ T Q K+G LS ++ A ++ V P++ D
Sbjct: 165 CDAAGRVDTVVRRFSMTAAQAAQKYGSDRLSRTVRRLAAVQPYAPVALVQLVRPRARRDP 224
Query: 226 K-KDKGNKGFHS-KFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIR 283
+ +D NK + S + + + R A FP++ R+ V ++YG SP M+ LP ++
Sbjct: 225 RRQDSLNKPYESLTWEAQEPRRLLHVSGYAEFPHLCARWEVNGGQLYGHSPVMDVLPDVK 284
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP 343
L E ++PP + KQR +L PG N ++ P+ P
Sbjct: 285 MLQEMARSQLLAVHKVVNPPMRVPTGFKQR-LNLIPGAQNY--VNPAQPDALSPLYQIRP 341
Query: 344 --LPYHEELNRLKESIRSLFLLDLFQVLDD--KASRSAAESMEKTREKGAFVGPLIGGLQ 399
++ ++ SIR ++F + +++ +AAE ME+++EK +GP++ Q
Sbjct: 342 DIQAVTYKIEDVRRSIREGLFTEMFLLFAGESRSNVTAAEIMERSQEKLLLLGPVVERHQ 401
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVN 459
++ + +I R +L G LP LKVEY S L + Q+ + Q
Sbjct: 402 TDILDPLIGRAFGLLARAGRLPPAPDVLAGRD--LKVEYVSALAQAQRLSAAQGVRQLAG 459
Query: 460 TVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEE 519
V P +D +D D+ PA ++R +V+ +R++R +++
Sbjct: 460 DVSRFAAMA--PEVLDKIDFDQAVDELASIAGAPAGIVRSDEDVQLLRRERALKQAEQAG 517
Query: 520 QHLQQQL 526
+ L +
Sbjct: 518 RALLESA 524
>gi|221213955|ref|ZP_03586928.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221166132|gb|EED98605.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
Length = 549
Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats.
Identities = 138/521 (26%), Positives = 229/521 (43%), Gaps = 34/521 (6%)
Query: 1 MNQRSAKDIQDR---FNYLKNQRGELNYWMEELTGFLYPYKNN--------------AQL 43
M AK ++ +K +R ++ F+ P +
Sbjct: 1 MTNDDAKLLEALNADHGRMKEKRQSYEAVWNDVIDFMMPRLDKFGQMPRPDSEKGRERSQ 60
Query: 44 RMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQV 103
RM+D+T A + + S+ITP Q WH L S A V+ + V
Sbjct: 61 RMFDSTAPLALRNFVAAMDSMITPATQVWHRLKTSNDA--------LNEVPSVKAYLQAV 112
Query: 104 TDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVY 163
LF R R + GF + + Y S+ FG G +E DV GI Y +VP+ ++
Sbjct: 113 VRALFAVRYRWQGGFTTQMGATYQSIGLFGPGALMIEHDVG-----HGIVYRNVPMQRLW 167
Query: 164 MSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLT 223
+ N+ ++D + + T+ Q ++G + LS M++AL R+ + T H V P++
Sbjct: 168 FAENNAGLIDKTHVLWRLTLRQAAQRFGRENLSPSMQTALERDPEKTHTFYHVVEPRADR 227
Query: 224 DKKK-DKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
D +K D N F S ++ +R + TFP+ +GR+ V D++YG SPA +A+P I
Sbjct: 228 DPRKLDGRNMRFGSYWLDEGRDRIIQNSGFRTFPFAIGRFYVGTDDVYGGSPAYDAMPDI 287
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
R N+ + + + PP +A + FDL+ G +N G L G + +P+ G
Sbjct: 288 RMANDMAKTNIRGAQKMVDPPLLASEDGVLEGFDLRSGSLNWGGLDERGNEMVKPLLTGK 347
Query: 343 PLPYHEEL-NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
E +++I F + LFQ+L D +A E +++ +EKG + P +G Q+E
Sbjct: 348 QAQIGIEFSQDTRQTINQWFYVTLFQILVDSGDMTATEVLQRAQEKGVLLAPTLGRTQAE 407
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+G +I RE+DIL G P + + VEY SPL K +A A+ LQ + +
Sbjct: 408 LLGPLIQREVDILAEAGQFPPMPQELIDAGADVDVEYDSPLNKAMRAGEGAAILQWLQQL 467
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAE 502
V DP+ ++ R+ + P + E
Sbjct: 468 G--VVAQFDPNAAKLVNGHRIGKLLADFGGVPVEALNTDEE 506
>gi|323699782|ref|ZP_08111694.1| phage head-tail connector protein [Desulfovibrio sp. ND132]
gi|323459714|gb|EGB15579.1| phage head-tail connector protein [Desulfovibrio desulfuricans
ND132]
Length = 579
Score = 468 bits (1205), Expect = e-129, Method: Composition-based stats.
Identities = 135/564 (23%), Positives = 228/564 (40%), Gaps = 48/564 (8%)
Query: 1 MNQRS-AKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN--------------AQLRM 45
M++ A+ + RF+ L+ R +ELT ++ P KN+ R+
Sbjct: 1 MDRTELARSLLKRFSGLEEARRPWVSSWQELTEYMLPRKNSFAGPGGHTLGRGRAGDERI 60
Query: 46 WDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTD 105
+D+T A L+S L L+T P W ++ A + +VR + + +
Sbjct: 61 FDSTPLHALELLASSLGGLLTNPSLPWFDISVKDRAKGD--------ADEVRAFMQEARE 112
Query: 106 TLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMS 165
+ +GF + Y V GT Y+EAD +R+ + PL V+++
Sbjct: 113 RMVAVFNSEDTGFQAHVHELYLDVALLGTAVMYVEADPT-----SVVRFSARPLGEVFVA 167
Query: 166 VNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDK 225
+ + VD+VYR + T Q + +WG S + + E ++HAV+P+ D
Sbjct: 168 ESARGQVDTVYRRYEVTARQAIQEWG-AACSDETRRKGEDRPEEPVEVLHAVFPRMDRDP 226
Query: 226 KK-DKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRR 284
+ F S ++ V + EE PY+V R+ A E YGR P AL +R
Sbjct: 227 AGFGSAHFPFASVYMEVKNSHVLEESGYLEMPYMVPRWAKAAGETYGRGPGQTALSDVRV 286
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPL 344
LN PP + + PG ++ R PV +
Sbjct: 287 LNAMARTALMAAEKMSDPPLMVPDDGFLGPVRSGPGGLSYYRAGSTDRIEALPVN-VDLR 345
Query: 345 PYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIG 404
E +N +ESI +FL D + + +A E++ + EK +GP++G LQ+EF+
Sbjct: 346 AAEEMMNGRRESIGRIFLSDQLAP--EGPAVTATEAVIRQAEKMRVLGPVLGRLQTEFLS 403
Query: 405 AMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVEL 464
+I R ++ G LP +P L+V YTS + + Q+ Q + + L
Sbjct: 404 PLIRRVFRVMLRGGALPPFPEGLSPDD--LEVRYTSSVTRAQKQYEAQGLAQVMEYLSPL 461
Query: 465 GVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQ 524
MD+ DTDRV+R N P+ ++ RV+E + +Q
Sbjct: 462 VGGRDAFGIMDNFDTDRVARHVAELFNIPSDYLKSED-------------RVVEGRTQKQ 508
Query: 525 QLQQTSQDIGAKAAGRAMEKKLTH 548
++ + Q A A+ K L+
Sbjct: 509 RVASSQQTASTVANAAAIAKTLSE 532
>gi|317120721|gb|ADV02543.1| putative phage-related head-to-tail joining protein [Liberibacter
phage SC2]
gi|317120782|gb|ADV02603.1| putative phage-related head-to-tail joining protein [Candidatus
Liberibacter asiaticus]
Length = 539
Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats.
Identities = 209/543 (38%), Positives = 301/543 (55%), Gaps = 24/543 (4%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNA--QLRMWDTTGSEACIKLSS 59
N+ K + RF LK QR E+ +E+ + PY+ A ++WDTT + A KL+S
Sbjct: 14 NKEFIKKLIARFESLKAQRSEIEPIRQEIIDLVCPYRGKASEDKKIWDTTATSASDKLAS 73
Query: 60 LLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFV 119
LL +LITP G +WHGL +F + +K +RE CD LF RE SGF
Sbjct: 74 LLHNLITPFGSRWHGLVAPDPQSGSFFASQ--ENKLIREQCDHFVMELFAQRELPASGFN 131
Query: 120 GCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREF 179
CL+ FYT VV FG GCFY+ G+RYISVP+S++ S NH+NVVD+V+ EF
Sbjct: 132 LCLKDFYTEVVLFGMGCFYVSE-----REGGGLRYISVPVSSIVCSANHENVVDTVFEEF 186
Query: 180 TFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFV 239
+ T + + KWG LS KMK L R++ +++ AV+P D +G+ V
Sbjct: 187 SLTPENVAKKWGYDALSDKMKEDLDRSDPQKYEFFQAVFPDKEDD------YEGYKKVIV 240
Query: 240 SVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLS 299
S+DENR EE PYIVGRY +G SP +ALP+IRRLN ++ + +
Sbjct: 241 SIDENRIIEEGYHRVMPYIVGRYEASPSNPFGYSPTHKALPSIRRLNALSASVSLYSEKA 300
Query: 300 LHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG-NPLPYHEELNRLKESIR 358
L+P + + + + F KP +N G + R+GR P G + P HEE+ RL+ IR
Sbjct: 301 LNPAVLTSEDTRGKTFSTKPKTVNHGWMDRQGRPRAVPFFTGSDARPSHEEMQRLQMQIR 360
Query: 359 SLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQG 418
L+LLDLFQVL D+ASRSA ESMEKT EKG F+ ++GGLQ+EF+G+M+ RE+DIL
Sbjct: 361 ELYLLDLFQVLADRASRSATESMEKTLEKGIFISAIVGGLQAEFVGSMVKREIDILY--- 417
Query: 419 NLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMD 478
+ +G LKV YTSPL+KYQ+AE + +QG+ E+ TGDP+ + +
Sbjct: 418 ---QDQGDIRGLGKDLKVSYTSPLYKYQKAEELNGIVQGIRVNAEIASMTGDPTPLMMFN 474
Query: 479 TDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAA 538
+++ + P VL+ + + + E Q++ Q Q ++++ + GA A
Sbjct: 475 PYLCGKYAADGSGVPEVLVLSEEDTKQ--KLIEKQKQAEASQMKQLTMEESIKTGGAIAQ 532
Query: 539 GRA 541
RA
Sbjct: 533 DRA 535
>gi|46581008|ref|YP_011816.1| hypothetical protein DVU2604 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46450429|gb|AAS97076.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234693|gb|ADP87547.1| hypothetical protein Deval_2404 [Desulfovibrio vulgaris RCH1]
Length = 569
Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats.
Identities = 115/531 (21%), Positives = 210/531 (39%), Gaps = 49/531 (9%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYPY-------------KNNAQLRMWDTTGSEA 53
++ +D + ++ +R E+ F+ P R+ D T + A
Sbjct: 6 REARDAASCVERERRVWEPLWREVEDFVLPRCIDSPRRADEAGDTARRGPRIIDGTATRA 65
Query: 54 CIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRER 113
L++ + +T P + W L ++ + R W D V L+
Sbjct: 66 VRILAAGMQGGLTSPARPWFRLR--------LADEDMEEAGPERRWLDVVERRLYA--AL 115
Query: 114 SRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVD 173
+RS F + YT + FG+ Y EAD + +R+ + + + + VD
Sbjct: 116 ARSNFYAAVHGLYTELAAFGSADMYHEADP-----QRVMRFSCLACGDFAWACDAAGRVD 170
Query: 174 SVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKG--- 230
+V R + Q+ ++G+ LS +++ L R+ ++H V P+ + +
Sbjct: 171 TVVRRLRMSARQMAQRYGEARLSRRVRRMLRRDPERSVPLVHMVRPRVRRNAGEAGKTAS 230
Query: 231 ------NKGFHS-KFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIR 283
N + S + + E FP++ R+ V +IYGRSP M+ LP ++
Sbjct: 231 GGLGGVNMPWQSLTWETEGAEGLLHEGGFEEFPHLAARWDVAGGDIYGRSPGMDVLPDVK 290
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP 343
L E ++PP S KQR +L PG N + P+ NP
Sbjct: 291 MLQEMARSQLLAIHKVVNPPMRVPSGFKQR-LNLIPGGQNYVTPGQG--ESVGPLYQINP 347
Query: 344 --LPYHEELNRLKESIRSLFLLDLFQVL--DDKASRSAAESMEKTREKGAFVGPLIGGLQ 399
++ ++ ++R F DLF + + +++ +AAE +E+ EK +GP+I Q
Sbjct: 348 DIGAVTHKMEDVRRAVREGFFNDLFLMFTAEGRSNITAAEVLERGEEKLLMLGPVIERHQ 407
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVN 459
SE + ++ R IL G ++VEY S L + Q+ + + + +
Sbjct: 408 SELLDPLLERTYGILRRGGL--LPPPPPELAGRSMRVEYVSALAQAQRVVTAQAIRRFAS 465
Query: 460 TVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQR 510
V L P +D +D ++ PA ++R AEV +R R
Sbjct: 466 DVSALAGVA--PQVLDKVDFEQAVDELAAIAGVPARVVRSDAEVATLRAAR 514
>gi|120601696|ref|YP_966096.1| hypothetical protein Dvul_0646 [Desulfovibrio vulgaris DP4]
gi|120561925|gb|ABM27669.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4]
Length = 569
Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats.
Identities = 115/531 (21%), Positives = 210/531 (39%), Gaps = 49/531 (9%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYPY-------------KNNAQLRMWDTTGSEA 53
++ +D + ++ +R E+ F+ P R+ D T + A
Sbjct: 6 REARDAASCVERERRVWEPLWREVEDFVLPRCIDSPRRADEAGDTARRGPRIIDGTATRA 65
Query: 54 CIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRER 113
L++ + +T P + W L ++ + R W D V L+
Sbjct: 66 VRILAAGMQGGLTSPARPWFRLR--------LADEDMEEAGPERRWLDVVERRLYA--AL 115
Query: 114 SRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVD 173
+RS F + YT + FG+ Y EAD + +R+ + + + + VD
Sbjct: 116 ARSNFYAAVHGLYTELAAFGSADMYHEADP-----QRVMRFSCLACGDFAWACDAAGRVD 170
Query: 174 SVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKG--- 230
+V R + Q+ ++G+ LS +++ L R+ ++H V P+ + +
Sbjct: 171 TVVRRLRMSARQMAQRYGEARLSRRVRRMLRRDPERSVPLVHMVRPRVRRNAGEAGKTAS 230
Query: 231 ------NKGFHS-KFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIR 283
N + S + + E FP++ R+ V +IYGRSP M+ LP ++
Sbjct: 231 GGLGGVNMPWQSLTWETEGAEGLLHEGGFEEFPHLAARWDVAGGDIYGRSPGMDVLPDVK 290
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP 343
L E ++PP S KQR +L PG N + P+ NP
Sbjct: 291 MLQEMARSQLLAIHKVVNPPMRVPSGFKQR-LNLIPGGQNYVTPGQG--ESVGPLYQINP 347
Query: 344 --LPYHEELNRLKESIRSLFLLDLFQVL--DDKASRSAAESMEKTREKGAFVGPLIGGLQ 399
++ ++ ++R F DLF + + +++ +AAE +E+ EK +GP+I Q
Sbjct: 348 DIGAVTHKMEDVRRAVREGFFNDLFLMFTAEGRSNITAAEVLERGEEKLLMLGPVIERHQ 407
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVN 459
SE + ++ R IL G ++VEY S L + Q+ + + + +
Sbjct: 408 SELLDPLLERTYGILRRGGL--LPPPPPELAGRSMRVEYVSALAQAQRVVTAQAIRRFAS 465
Query: 460 TVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQR 510
V L P +D +D ++ PA ++R AEV +R R
Sbjct: 466 DVSALAGVA--PQVLDKVDFEQAVDELAAIAGVPARVVRSDAEVATLRAAR 514
>gi|48697195|ref|YP_024925.1| hypothetical protein BcepC6B_gp05 [Burkholderia phage BcepC6B]
gi|47779001|gb|AAT38364.1| gp05 [Burkholderia phage BcepC6B]
Length = 549
Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats.
Identities = 140/520 (26%), Positives = 235/520 (45%), Gaps = 34/520 (6%)
Query: 1 MNQRSAKDIQDR---FNYLKNQRGELNYWMEELTGFLYPYKNN--------------AQL 43
M AK +Q +K +R ++ +L P +
Sbjct: 1 MTNDDAKILQALNADHGRMKEKRQSYEAVWNDVIDYLMPRLDKFGQLPRPDSEKGRERSQ 60
Query: 44 RMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQV 103
+M+D+T A + + S+ITP Q WH L A V+ + V
Sbjct: 61 KMFDSTAPLALRNFVAAMDSMITPATQLWHRLKTGNDA--------LNEIASVKAYLQGV 112
Query: 104 TDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVY 163
TLF R R + GFV + + Y S+ FG G +E DV + GI Y +VP+ ++
Sbjct: 113 VRTLFAARYRWQGGFVTQMGATYQSIGLFGPGALMIEHDVGK-----GIVYRNVPMQRLW 167
Query: 164 MSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLT 223
+ N+ ++D + ++ T+ Q ++G + LS M+S L ++ + HAV P++
Sbjct: 168 FAENNSGLIDKTHVQWELTLRQAAQRFGRENLSPSMQSTLEKDPEKSAIFYHAVEPRADR 227
Query: 224 DKKK-DKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
D +K D N F S ++ +R + TFP+ +GR+ V D++YG SPA +A+P +
Sbjct: 228 DPRKLDGRNMQFASYWLDEGRDRIVQNSGFRTFPFAIGRFYVGTDDVYGGSPAYDAMPDV 287
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
R N+ + + + PP +A + FDL+ G +N G L+ +G + +P+ G
Sbjct: 288 RMANDMAKTNIRGAQKLVDPPLLANEDGVLDGFDLRSGALNWGGLNDKGEEMVKPLLTGK 347
Query: 343 PLPYHEEL-NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
E +++I F + LFQ+L D +A E +++ +EKG + P +G QSE
Sbjct: 348 QAQIGIEFAQDTRQTINQWFYVTLFQILVDSGDMTATEVLQRAQEKGVLLAPTLGRTQSE 407
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+G MI+RE+DIL G LP+ + + VEY SPL K +A A+ LQ + +
Sbjct: 408 LLGPMIAREVDILAEAGQLPDMPQELIDAGADVDVEYDSPLNKAMRAGEGAAILQWLQQL 467
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTA 501
V DP+ + R++R P +
Sbjct: 468 G--IVSQFDPAAAKVPNGARIARLLADYGGVPVEAMSTDE 505
>gi|254251745|ref|ZP_04945063.1| hypothetical protein BDAG_00942 [Burkholderia dolosa AUO158]
gi|124894354|gb|EAY68234.1| hypothetical protein BDAG_00942 [Burkholderia dolosa AUO158]
Length = 539
Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats.
Identities = 110/563 (19%), Positives = 213/563 (37%), Gaps = 46/563 (8%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLR--------------MW 46
M + + R +K++R E P + + ++
Sbjct: 1 MIDSLGETLAKRLETMKSKRQVHELVWRECFMLTDPVRASGLDGPQMDANQIAQAVALIF 60
Query: 47 DTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDT 106
D+T ++A L + + S +TP W + + + W D ++
Sbjct: 61 DSTATDAKRTLEASIMSGMTPANSLWFTMT------------VNGADDEGERWLDSASEV 108
Query: 107 LFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSV 166
L+ + + F G Y+ DE G+ + P++ VY +
Sbjct: 109 LW--QNIHSANFDSEAADAVAD-GMAGWFALYI----DENRDAGGLYFEHWPMAGVYCAS 161
Query: 167 N-HQNVVDSVYREFTFTVDQIVSKWGD--KVLSSKMKSALARNENERFTIIHAVYPKSLT 223
+ VD V+R + T +Q V ++ L ++ E + A+YP+ +
Sbjct: 162 SKPGGTVDIVFRCYQLTAEQCVREFNRRGDSLPQEIVDKAKNKPEELVDLCQAIYPRDVH 221
Query: 224 DKKKDK-GNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
+ N S + ++ + E P +V R++ + +YG P ++ALP I
Sbjct: 222 MVGALRAKNMPIASVTFACNQKQVIRESGYHEMPVVVARWKKIPNSVYGVGPLLDALPDI 281
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
R LN+ V L++ IA + +K G + + +P+Q +
Sbjct: 282 RTLNDIVKLEYANLDLAVSGMWIAEDDGVLNPRTVKVGPRKV--IVANSVDSMKPLQPAS 339
Query: 343 PLPYHEE-LNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
E + +L+ IR + D Q D A +A E + +GP+ G LQ+E
Sbjct: 340 NFQLAETRIEKLQGQIRKTLMADQLQPQDGPA-MTATEVHVRVDLIRQLLGPIYGRLQAE 398
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
++ +I+R + G P + V+Y SPL + Q+ E V++ + + V
Sbjct: 399 YLQPLIARCFGLAYRAGVFPPPPDSLGG--RNFSVQYQSPLARAQKLEEVSAIERLMGDV 456
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQH 521
+ P +D++D D R + P ++R + +V RQQ++ ++Q
Sbjct: 457 TVIA--QVKPEALDNIDGDEAVRLTAKNLGVPDSIVRTSDQVTQYRQQKQAAAAQQQQQQ 514
Query: 522 LQQQLQ-QTSQDIGAKAAGRAME 543
L ++Q + IG+ AA R +
Sbjct: 515 LGMEVQGDVMKSIGSAAASRMVA 537
>gi|291334411|gb|ADD94066.1| hypothetical protein ALOHA_HF400048F7ctg1g11 [uncultured phage
MedDCM-OCT-S04-C1035]
Length = 467
Score = 456 bits (1172), Expect = e-126, Method: Composition-based stats.
Identities = 116/483 (24%), Positives = 219/483 (45%), Gaps = 29/483 (6%)
Query: 64 LITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQ 123
++T P W L F ++ + + W + T+ ++ ++S F +
Sbjct: 1 MLTNPSTPWFSLK--------FKNEDMEGEDEAKLWLESATEVMYSAF--NQSNFQQEIF 50
Query: 124 SFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTV 183
Y ++ FGT ++E D DE L+ R+I+ +Y+S N + +D+V+R+F +
Sbjct: 51 ELYHDLITFGTAAMFIEED-DEDNLKFSTRHIN----EIYISENEKGRIDTVFRKFRISA 105
Query: 184 DQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKK-DKGNKGFHSKFVSVD 242
+ K+G +S+ + ++ E I+HAVYP+ + KK D N F S ++ D
Sbjct: 106 RAAIRKFG--NVSNNIAVIAKKDPYEEVEILHAVYPRDDYNPKKQDTENMQFESIYLDAD 163
Query: 243 ENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHP 302
FP++V RY + EIYGRSPAM ALP ++ LNE + + + + P
Sbjct: 164 SGEELSVSGFREFPFVVPRYLKASHEIYGRSPAMTALPDVKMLNEMSKTIIKSAQKQVDP 223
Query: 303 PTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEEL-NRLKESIRSLF 361
P + + PG +N R +P+ G + + + SIR+ F
Sbjct: 224 PLLVPDDGFLLPVRTVPGGLNFYRAGT--RDRIEPLNIGANNTLGLNMEEQRRNSIRNAF 281
Query: 362 LLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLP 421
++ ++ D +A E +++ EK +GP++G LQSE + +I R IL +
Sbjct: 282 YVNQL-MMQDGPQMTATEVIQRNEEKMRLLGPVLGRLQSELLKPLIDRSFAILMRRNLFA 340
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDR 481
+ + +++EY SPL K Q++ ++S ++ + + L DH++ D+
Sbjct: 341 QPPEFLSGQD--IEIEYVSPLAKAQKSTELSSIMRAIEIMGSLSNVA---PVFDHINMDK 395
Query: 482 VSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRA 541
+ R P +++ +E+ RQ + Q+ M++ QQL + + A +A
Sbjct: 396 LVRHLTNIVGVPQKILKPQSELNAERQAQAQQQEQMQQMQQVQQLAEAGGKVAPLA--KA 453
Query: 542 MEK 544
+ +
Sbjct: 454 LPE 456
>gi|221201497|ref|ZP_03574536.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
gi|221207947|ref|ZP_03580953.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221172132|gb|EEE04573.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221178765|gb|EEE11173.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
Length = 549
Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats.
Identities = 143/555 (25%), Positives = 240/555 (43%), Gaps = 34/555 (6%)
Query: 1 MNQRSAKDIQDR---FNYLKNQRGELNYWMEELTGFLYPYKNN--------------AQL 43
M AK ++ +K +R ++ FL P +
Sbjct: 1 MTNDDAKLLEALNADHGRMKEKRQSYEATWNDVIDFLMPRLDKFGQLPRPDSEKGRERSQ 60
Query: 44 RMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQV 103
RM+D+T A + + S+ITP Q WH L S + V+ + +V
Sbjct: 61 RMFDSTAPLALRNFVAAMDSMITPATQLWHRLKASN--------DVLNENAAVKAYLQEV 112
Query: 104 TDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVY 163
LF R R + GFV + + Y SV FG G +E DV + GI Y +VP+ ++
Sbjct: 113 VRVLFAVRYRWQGGFVTQMGATYQSVGLFGPGALMIEHDVGQ-----GIVYRNVPMQRLW 167
Query: 164 MSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLT 223
+ N+ ++D + ++ T+ Q ++G + LS M+SAL R+ + H V P++
Sbjct: 168 FAENNAGIIDKTHVQWELTLRQAAQRFGRENLSPSMQSALERDPEKSAIFYHIVEPRADR 227
Query: 224 DKKK-DKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
D +K D N F S ++ +R + TFP+ +GR+ V + YG SPA +A+P
Sbjct: 228 DPRKLDGRNMRFGSYWLDEGRDRIIQNSGFRTFPFAIGRFYVGTGDAYGGSPACDAMPDT 287
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
R +N+ + + + PP + + FDL+ G +N G L +G + +P+ G
Sbjct: 288 RMVNDMAKTNIRGAQKLVDPPLLVSEDGSLEGFDLRSGSLNWGGLDEKGNEMVKPLLMGK 347
Query: 343 PLPYHEEL-NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
E +++I F + LFQ+L D +A E +++ +EKG + P +G QSE
Sbjct: 348 QAQIGIEFTQDTRQTINQWFYVTLFQILVDSGDMTATEVLQRAQEKGVLLAPTLGRTQSE 407
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+G +I RELDIL LPE + +++EY SPL K +A A+ LQ + +
Sbjct: 408 LLGPLIERELDILAEAAQLPEMPRELINAGANVEIEYDSPLNKAMRAGESAATLQWLQQL 467
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQH 521
V D M + R++R A P + E++ +V +
Sbjct: 468 S--VVAQFDLRAMKAPNGLRIARMLADAGGVPVEAMNTDEELQAQEAAEAQAMQVQQALA 525
Query: 522 LQQQLQQTSQDIGAK 536
+D+
Sbjct: 526 AAPVAAGAIKDLSDA 540
>gi|262043663|ref|ZP_06016772.1| hypothetical protein HMPREF0484_3791 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039001|gb|EEW40163.1| hypothetical protein HMPREF0484_3791 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 554
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 133/514 (25%), Positives = 236/514 (45%), Gaps = 29/514 (5%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK----------NNAQLRMWDTTGS 51
I ++ R +E+ + P + D TG+
Sbjct: 10 ESERIGRILREQKSMETDRSVFEQHWQEIAERILPRSAEFKGTRQKGGKRTEKAIDATGA 69
Query: 52 EACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFR 111
A K + + S+ITP QKWH L+ + A ++V+ + +V D LF R
Sbjct: 70 LALQKFGAAIESVITPRTQKWHTLS----------NERFANDEEVQRYFQEVRDILFRLR 119
Query: 112 ERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNV 171
+ F Y S FGTGC +++ + + G RY + L +Y + N Q +
Sbjct: 120 YAPWANFASQSHEHYISSGAFGTGCTFVDNVIGK-----GPRYCTYHLREIYFTENFQGM 174
Query: 172 VDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTD-KKKDKG 230
+D V+R++ T Q + ++G++ L ++++ + +++F +H V P D ++DK
Sbjct: 175 IDVVHRKYCMTARQAIQQFGEENLPQQVRTTARNDPSKQFNFLHRVEPNDKRDMSRQDKE 234
Query: 231 NKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVN 290
F S + ++ ++ +E + PY + RY E+YGRSPAM LP I+ LNE
Sbjct: 235 GMPFRSVHICMEGSKIVQEGGYWSQPYAISRYYTAPGEVYGRSPAMVVLPDIKLLNEINR 294
Query: 291 ELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEEL 350
+ + ++++ PP + + + F + PG +N G ++R+G+ L P+ L
Sbjct: 295 AIIEGAQMAVRPPMLLPEDGILQPFKMMPGALNFGGMNRDGKPLALPLNTATDFSVAMTL 354
Query: 351 -NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISR 409
+ +++I F + LFQ+L D +A E+M + +EKG + P G +Q+EF+G +I R
Sbjct: 355 AEQKRQTINDGFFITLFQILVDNPQMTATEAMLRAQEKGQLLAPTAGRIQAEFLGTLILR 414
Query: 410 ELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTG 469
E+DI G LPE +EYTSPL + Q +E + + VN +G
Sbjct: 415 EIDIAYQNGLLPEPPEQLKEIGGEYDIEYTSPLVRLQMSEEASGIMNVVNAAGTIG--QF 472
Query: 470 DPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEV 503
D + ++ D RF A+ P +++ E+
Sbjct: 473 DQNIARTLNGDAALRFIAKASGAPLQVVKTEDEM 506
>gi|303328393|ref|ZP_07358830.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
gi|302861387|gb|EFL84324.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
Length = 567
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 117/521 (22%), Positives = 199/521 (38%), Gaps = 46/521 (8%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYP-------------YKNNAQLRMWDTTGSEA 53
K + R+ L +R ++L P KN + D+TG A
Sbjct: 6 KKLHQRWEMLVEKRRPWISTWKDLAALYLPTGYRDADDGNARGGKNLLNPEVVDSTGIYA 65
Query: 54 CIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRER 113
L++ + +T P + W GL R W D+V + +
Sbjct: 66 LRTLAAGMQGGMTSPARPWFGLRLE-------GGDSGDGGITARAWIDEVVERMRTIL-- 116
Query: 114 SRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVD 173
S F G + Y + FGT C + AD+ G + + V+ VD
Sbjct: 117 HTSNFYGVIYQAYAQLAAFGTACVFERADM------SGFTFDCCQAGTFVLDVDAGGRVD 170
Query: 174 SVYREFTFTVDQIVSKWGDKVLSSKMKSAL--ARNENERFTIIHAVYPKSLTDKKKDKGN 231
+V R+ T Q+ ++G+ L +K++L A N R + HAVYP+ +++ N
Sbjct: 171 TVMRKIWLTARQMAQEFGEDALPDMVKTSLNNASMGNVRHAVFHAVYPRREPGLRRETIN 230
Query: 232 ---KGFHSKFVS-----VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIR 283
+ F S + E +FP+ R+ V + ++YG SPAM+ +P R
Sbjct: 231 GARRPFASVYWMRGMSGAGGYHPLRESGFDSFPFFGVRWNVLSGDVYGTSPAMDTMPDCR 290
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP 343
L + + + PP +E + DL PG +N ++ + PV P
Sbjct: 291 MLQQMAKTTLKGVHKMVDPPVNVAAELQSVGVDLTPGGVNYVSMMGNNGAAVTPVLKVQP 350
Query: 344 --LPYHEELNRLKESIRSLFLLDLFQVLDDKASR--SAAESMEKTREKGAFVGPLIGGLQ 399
+ ++++ I+ DLF++L R +A E + EK +GP++ L
Sbjct: 351 DVAAAQAMIQQVQQQIKEGLYNDLFRMLLGTNRRQITATEVDAREAEKMILIGPVLERLH 410
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVN 459
E +I R ++D LP LKVE+ S L + Q+ S Q +
Sbjct: 411 DELFIPLIDRTFALMDKFNALPPVPEELAG--RGLKVEFISTLAQAQKLVSTGGIQQLLA 468
Query: 460 TVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDT 500
+ G DPS +D ++ DR+ A ++R
Sbjct: 469 FIG--GAAQVDPSVLDALNGDRLVDKYNEYLGVDAGVLRPQ 507
>gi|302339294|ref|YP_003804500.1| head-to-tail joining protein [Spirochaeta smaragdinae DSM 11293]
gi|301636479|gb|ADK81906.1| head-to-tail joining protein, putative [Spirochaeta smaragdinae DSM
11293]
Length = 560
Score = 448 bits (1152), Expect = e-123, Method: Composition-based stats.
Identities = 125/526 (23%), Positives = 231/526 (43%), Gaps = 42/526 (7%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----NNAQLR-----MWDTTGS 51
++SA++I F LK +R +E+T ++P + N + ++D T
Sbjct: 3 EEKSAQEIIQTFEQLKQERSTWEDEYQEITEQIFPRRSVWTDNKGRASRSGGLIYDGTPI 62
Query: 52 EACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFR 111
A L++ L + P +W L E + + R+W + V + ++
Sbjct: 63 SALNLLANGLVGYLVSPATRWFKLRP--------TQDELLQIRGARQWLEIVENLIYD-- 112
Query: 112 ERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNV 171
E +RS F + ++ G Y++ D+ + R+ +Y++ +
Sbjct: 113 EFNRSNFYEEIVEYFRDGGSIGIATIYVQEDIGRRMANYSCRH----PKEIYIAEDRFGY 168
Query: 172 VDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKK-DKG 230
+D+V+R F T ++ ++G + LS +++ R+ ER IIHAVYP+ + +K
Sbjct: 169 IDTVFRRFFPTAKELEEEFGREALSDGVQNLCERSPYERVEIIHAVYPRKKRNPRKKGNR 228
Query: 231 NKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVN 290
+ F S +V N E+ PY+V R+ +DE+YGR P +AL ++RLN
Sbjct: 229 DMKFASAYVEGGSNHKIRERGYERLPYVVWRWSTNSDEVYGRGPGYDALVDVKRLNRLSR 288
Query: 291 ELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEEL 350
++ + ++++ PP + + + + P +N E PV + + L
Sbjct: 289 DMLKQSQMAVDPPLAVPEKMRGK-VNWVPRGLNYYQNPNE-----VPVALNPGMQFQVGL 342
Query: 351 NR---LKESIRSLFLLDLFQVLDDKAS-RSAAESMEKTREKGAFVGPLIGGLQSEFIGAM 406
+R +++ I F+ D F +L+ +A E ME+ EK A +G +IG + SEF+ +
Sbjct: 343 DREQHMQQIIEKHFMTDFFLMLEQAPKEMTATEVMERQSEKAAVLGTVIGRISSEFLDPI 402
Query: 407 ISRELDILDSQGNL----PECEGADNPPVSLLKVEYTSPLFKYQQAESV-ASALQGVNTV 461
I DI L PE A ++++Y PL + Q+ V A Q +N V
Sbjct: 403 IDITFDIAMKGKRLPPPPPEFAEAMYKTNGGIEIDYLGPLAQAQKKFHVTQGAQQSLNAV 462
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIR 507
+ +P D ++ D+++ L A P I D +V+ IR
Sbjct: 463 API--MQINPQVADLINWDQLTMEILHAYGMPQKAIVDLRDVQKIR 506
>gi|288959388|ref|YP_003449729.1| phage head-tail connector protein [Azospirillum sp. B510]
gi|288911696|dbj|BAI73185.1| phage head-tail connector protein [Azospirillum sp. B510]
Length = 535
Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats.
Identities = 135/552 (24%), Positives = 220/552 (39%), Gaps = 30/552 (5%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTT 49
M A++I R L R EL ++ P + R++D T
Sbjct: 1 MADARAEEIIRRRESLAALRSPWEGVWSELGEYVRPLRTGFAGGPPQSGAKPSSRLFDAT 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
A L++ L +IT P W + E + V+ W V +
Sbjct: 61 AGMANNNLAAGLYGMITNPANSWFNIKHEI--------DELNEVQAVKLWMATVERAMRQ 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+ F + Y + FGT FY++ G+ Y LS ++S N +
Sbjct: 113 ALAANGLAFYSRVFGLYLDLPAFGTAVFYIDEQPG-----RGLWYSHRRLSECFVSENDR 167
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKK-D 228
+D+VYR+FT+T Q +WGD+ K+ + F +HAV P D +K
Sbjct: 168 EEIDTVYRDFTWTARQAQQRWGDRAGREVAKAIEKGEPDRPFRWLHAVEPNPDFDPRKLG 227
Query: 229 KGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNET 288
K F S +V VD+ E PY V R+ YG S A+ A+ I+ +N
Sbjct: 228 ARFKPFRSVYVGVDDRHVVAEGGYDELPYQVPRWAPSDAGTYGDSAAVLAIADIKMVNAM 287
Query: 289 VNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHE 348
+ ++ PP +A E R PG + G + G L +P+Q G +
Sbjct: 288 GKTTIVGAQKAVDPPLLAPDEFSVRGLRTSPGGITYGGVDMGGNQLLKPLQTGARVDLGL 347
Query: 349 EL-NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
EL + + +IR F L ++ R+A E ME EK + P +G +Q+EF+ +
Sbjct: 348 ELEEQRRGAIREAFHWSLLLMVQQ-PGRTATEVMEHQEEKLRLMAPHLGRIQAEFLDPAL 406
Query: 408 SRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVK 467
R +L+ G LP L+++Y SPL + +A A+ ++ + + +
Sbjct: 407 GRVFSLLNRTGQLPPPPDVLR-QYPGLRLDYVSPLARAAKAAEGAAVIRTLEALGPIA-- 463
Query: 468 TGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQ 527
P MD+ DTD ++R A PA ++ D +VE +R R Q++
Sbjct: 464 QLRPEVMDNFDTDEIARGISDAYGLPAKMMLDPRQVEQMRSARAQQQQQAVALEQSAVAA 523
Query: 528 QTSQDIGAKAAG 539
+D+ A A
Sbjct: 524 GALKDMSAAGAA 535
>gi|167041083|gb|ABZ05844.1| hypothetical protein ALOHA_HF400048F7ctg1g11 [uncultured marine
microorganism HF4000_48F7]
Length = 552
Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats.
Identities = 115/517 (22%), Positives = 222/517 (42%), Gaps = 37/517 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN-----------AQLRMWDTT 49
M+ +A +Q+ + LK++RG +++ + P + + + R++++T
Sbjct: 1 MSSDAATLVQE-YEALKSERGNWENMWQDIAELMIPRRADFTNRYRAPGEQRRDRIYEST 59
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
A ++ +S L + +T W L +E ++++V+ W + T
Sbjct: 60 AVRALVRGASGLHNTLTSSTVPWFALETED--------RELMKNRQVQLWLEDATRRCNS 111
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
RS F +Y ++ FGTGC Y+ + G + S L + Y++
Sbjct: 112 VFNAPRSMFHQSAHEYYLDLLAFGTGCMYVTQEPG-----MGPVFKSYFLGHTYIAEGKT 166
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDK 229
++DSVYR F T + ++G L ++ A + RF ++H V P+S +
Sbjct: 167 GMIDSVYRRFDDTARSLYKQFG-NKLPDEIVKAADKEPFRRFELLHIVRPRSNAPGGRTS 225
Query: 230 GNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETV 289
K F S +V + + +E PYIV R++ + E+YGR P +EALP +R +NE
Sbjct: 226 KQKPFLSVYVHAESRKVVQEGGFDEMPYIVSRWQKNSMEVYGRGPGIEALPDVRMVNEME 285
Query: 290 NELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHE- 348
+ + PP + + PG +N + P+Q G + +E
Sbjct: 286 RVGLIALQKVVDPPLLVPDDGFLSPIRTTPGGLNYYRAGLGPQDRIAPLQTGGRVDLNEA 345
Query: 349 ELNRLKESIRSLFLLDLFQVLDDKASR------SAAESMEKTREKGAFVGPLIGGLQSEF 402
++ +++ +I F LDL ++ A+ SA E + R++ +GP++ ++EF
Sbjct: 346 KIGQVRAAIERTFYLDLLELPGPTAADGDVLRFSATEIAARQRDRLNILGPIVARQEAEF 405
Query: 403 IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVV 462
+G ++ R L ++ LP + KV Y++P+ Q+A +AS Q + +V
Sbjct: 406 LGPLVIRTLSVMLRAEMLPPPPQVLL--DADFKVSYSNPVAIAQRAGELASISQLIQFLV 463
Query: 463 ELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRD 499
DP+ + T RV+ + + +
Sbjct: 464 PFA--QLDPTVIQRFQTGRVAELAAEILKVSPSVFKS 498
>gi|54302247|ref|YP_132240.1| putative head-tail connector protein [Photobacterium profundum SS9]
gi|46915668|emb|CAG22440.1| hypothetical protein PBPRB0567 [Photobacterium profundum SS9]
Length = 552
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 120/567 (21%), Positives = 216/567 (38%), Gaps = 46/567 (8%)
Query: 3 QRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN-----------AQLRMWDTTGS 51
+ + F L + EL ++ P + + D + +
Sbjct: 2 KTIRQQCDSIFQGLDSDYAPWESHYRELANYIQPRRQRFSKDSVNRGGAHNSNIIDPSAT 61
Query: 52 EACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFR 111
A + + S IT P KW L K+ + VR + D D + G
Sbjct: 62 LAMRVAAGGMYSGITNPVTKWLRL--------NVEDKDLNKYHIVRLYLDTCADLILGML 113
Query: 112 ERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNV 171
+ S F + S + ++ + E D +R+ P+ + + + +
Sbjct: 114 --ASSNFYNVVPSMFMDLLTYSGSSVGFEKDP-----LTVMRFYPNPIGSYRLGIGPRQN 166
Query: 172 VDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFT-IIHAVYPKSLTDKKK-DK 229
V + R+ + V Q+V K+G +S +KSA + + T I H V+ +
Sbjct: 167 VSTHGRKVEYRVSQVVEKFGLDNVSQSIKSAYRSGKYNQLTEIRHLVFDNPDFVPRAFSA 226
Query: 230 GNKGFHSKFVS--VDENRFFEEKQIATFPYIVGRYRVRADEIYGR-SPAMEALPTIRRLN 286
K S + D N F FP++ R+ V ++ YG P M AL +I+ L
Sbjct: 227 VRKPICSIWYDPADDRNPFLRRSGFDEFPFVTPRWEVIGNDTYGSFGPGMLALGSIKGLQ 286
Query: 287 ETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPV-QFGNPLP 345
+ + + L PP + S K L PG + +++G+ F P Q PL
Sbjct: 287 KDQRDKYEAQDKMLKPPMVGPSSLKNNPRSLLPGAVTF-VDNQQGQQGFTPAFQTNFPLN 345
Query: 346 YHEE-LNRLKESIRSLFLLDLFQVLDD--KASRSAAESMEKTREKGAFVGPLIGGLQSEF 402
Y E + + I S F DLF + D K++ +A E + EK +GP++ E
Sbjct: 346 YQLESIRDTRAIIDSAFFKDLFLAVIDIGKSNTTATEIAARKEEKLLMLGPVLNRFNEEG 405
Query: 403 IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVV 462
+ ++S ++ +G LPE + + +EY L + Q+A ++S + V +
Sbjct: 406 LDPIVSASFYEMNRRGMLPEPPPELDGVD--VNIEYVGLLQQAQKAVGISSIERTVGFIG 463
Query: 463 ELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHL 522
L D +D +D D V T T ++ + +V+ R R + ++Q
Sbjct: 464 NLAGVRQD--VLDKVDFDSVVDIYTDITGTTPRILFNEQQVKATRDAR-----IQQQQRE 516
Query: 523 QQQLQQTSQDIGAKAAGRAMEKKLTHD 549
Q GA+AA + + + T +
Sbjct: 517 QMAAMAAPAKDGAEAA-KLLSETRTDE 542
>gi|293609619|ref|ZP_06691921.1| predicted protein [Acinetobacter sp. SH024]
gi|292828071|gb|EFF86434.1| predicted protein [Acinetobacter sp. SH024]
Length = 547
Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats.
Identities = 121/570 (21%), Positives = 226/570 (39%), Gaps = 47/570 (8%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN-------------AQLRMWD 47
M++ A+ + R + LK R L E + P + + + D
Sbjct: 1 MSELVAR-LCKRLSELKAARNRLEPHWSECYRYAAPERQQSFIGDDVTDTRKTQRAELLD 59
Query: 48 TTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTL 107
+T SEA L S + S TP W + + A + +W D+V
Sbjct: 60 STLSEATQLLVSSIISGTTPANALWFKAVPN-------GVDDPAELTEGEKWLDEVCQ-- 110
Query: 108 FGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVN 167
F +R + + + V G G Y + D G G + + + Y++
Sbjct: 111 FIWRNIHGANYDSEIFDLVLDCVVAGWGVMYADVDRHAGG---GYVFQTWDIGQCYLAST 167
Query: 168 HQN-VVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKK 226
Q+ VD++YRE+ T+ +V+++G+ +S K+++ + + ++ V P+ K
Sbjct: 168 RQDQKVDTLYREYEMTMAALVNEYGENKVSEKVRNTYKSKPDCKVKVLWVVEPRKTGYIK 227
Query: 227 KDK----GNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
D+ F S V VDE E FP+++ R+R + +YG ALP
Sbjct: 228 GDRQLMPKEMPFASYHVEVDEKNVLRETGYNEFPFVIPRFRKIPNSVYGTGQVSIALPDA 287
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEA--KQRNFDLKPGYMNIGALSREGRSLFQPVQF 340
+ N+ + + + +S V + R L G + + + +
Sbjct: 288 KTANKLMRDTLRSAEISTLGMYAGVDDGTFNPRTVRLGGGKIIVVNDVNS----LKRIDD 343
Query: 341 GNPLPYHEE-LNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQ 399
G + L L+ +IR + D Q D A +A E + +GPL G Q
Sbjct: 344 GKGYQVGVDLLAHLQGAIRKKMMADQLQPADGPA-MTATEVHVRVDLIRQQLGPLYGRWQ 402
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVN 459
+E + ++ R + G + E L ++ S L + QQ E V + + +
Sbjct: 403 AELLTPLLERTFGLAYRAGVIGEAPEEM--QGRNLSFKFISALARSQQLEEVTAIERFLA 460
Query: 460 TVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEE 519
+ + DPS +D++D D V++ S P ++R +++ IR+QR+ ++ +
Sbjct: 461 GMSNVA--QIDPSILDNVDMDAVAQVSGMGLGVPTAILRTQDQIDAIRKQRQEAQQQAAQ 518
Query: 520 QHLQQQLQQTSQDIGAKAAGRAMEKKLTHD 549
Q +Q L Q + A G+ +E +LT +
Sbjct: 519 QEQEQALAQPLAN----AVGKGLESELTSE 544
>gi|332875224|ref|ZP_08443057.1| hypothetical protein HMPREF0022_02690 [Acinetobacter baumannii
6014059]
gi|332736668|gb|EGJ67662.1| hypothetical protein HMPREF0022_02690 [Acinetobacter baumannii
6014059]
Length = 547
Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats.
Identities = 121/570 (21%), Positives = 226/570 (39%), Gaps = 47/570 (8%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN-------------AQLRMWD 47
M++ A+ + R + LK R L E + P + + + D
Sbjct: 1 MSELVAR-LCKRLSELKAARNRLEPHWSECYRYAAPERQQSFIGDDVTDTRKTQRAELLD 59
Query: 48 TTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTL 107
+T SEA L S + S TP W + + A + +W D+V
Sbjct: 60 STLSEATQLLVSSIISGTTPANALWFKAVPN-------GVDDPAELTEGEKWLDEVCQ-- 110
Query: 108 FGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVN 167
F +R + + + V G G Y + D G G + + + Y++
Sbjct: 111 FIWRNIHGANYDSEIFDLVLDCVVAGWGVMYADVDRHAGG---GYVFQTWDIGQCYLAST 167
Query: 168 HQN-VVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKK 226
Q+ VD++YRE+ T+ +V+++G+ +S K+++ + + ++ V P+ K
Sbjct: 168 RQDQKVDTLYREYEMTMAALVNEYGENKVSEKVRNTYKSKPDCKVKVLWVVEPRKTGYIK 227
Query: 227 KDK----GNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
D+ F S V VDE E FP+++ R+R + +YG ALP
Sbjct: 228 GDRQLMPKEMPFASYHVEVDEKIVLRETGYNEFPFVIPRFRKIPNSVYGTGQVSIALPDA 287
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEA--KQRNFDLKPGYMNIGALSREGRSLFQPVQF 340
+ N+ + + + +S V + R L G + + + +
Sbjct: 288 KTANKLMRDTLRSAEISTLGMYAGVDDGTFNPRTVRLGGGKIIVVNDVNS----LKRIDD 343
Query: 341 GNPLPYHEE-LNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQ 399
G + L L+ +IR + D Q D A +A E + +GPL G Q
Sbjct: 344 GKGYQVGVDLLAHLQGAIRKKMMADQLQPADGPA-MTATEVHVRVDLIRQQLGPLYGRWQ 402
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVN 459
+E + ++ R + G + E L ++ S L + QQ E V + + +
Sbjct: 403 AELLTPLLERTFGLAYRAGVIGEAPEEM--QGRNLSFKFISALARSQQLEEVTAIERFLA 460
Query: 460 TVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEE 519
+ + DPS +D++D D V++ S P ++R +++ IR+QR+ ++ +
Sbjct: 461 GMSNVA--QIDPSILDNVDMDAVAQVSGMGLGVPTAILRTQDQIDAIRKQRQEAQQQAAQ 518
Query: 520 QHLQQQLQQTSQDIGAKAAGRAMEKKLTHD 549
Q +Q L Q + A G+ +E +LT +
Sbjct: 519 QEQEQALAQPLAN----AVGKGLESELTSE 544
>gi|169795385|ref|YP_001713178.1| putative phage related protein [Acinetobacter baumannii AYE]
gi|169148312|emb|CAM86177.1| conserved hypothetical protein; putative phage related protein
[Acinetobacter baumannii AYE]
Length = 547
Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats.
Identities = 121/570 (21%), Positives = 224/570 (39%), Gaps = 47/570 (8%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN-------------AQLRMWD 47
M++ A+ + R + LK R L E + P + + + D
Sbjct: 1 MSELVAR-LCKRLSELKAARNRLEPHWSECYRYAAPERQQSFIGDDVTDTRKTQRAELLD 59
Query: 48 TTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTL 107
+T SEA L S + S TP W + + A +W D+V
Sbjct: 60 STLSEATQLLVSSIISGTTPANALWFKAVPN-------GVDDPAELTDGEKWLDEVCQ-- 110
Query: 108 FGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVN 167
F +R + + + V G G Y + D G G + + + Y++
Sbjct: 111 FIWRNIHGANYDSEIFDLVLDCVVAGWGVMYADVDRHAGG---GYVFQTWDIGQCYLAST 167
Query: 168 HQN-VVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKK 226
Q+ VD++YRE+ T+ +V+++G+ +S K+++ + + ++ V P+ K
Sbjct: 168 RQDQKVDTLYREYEMTMAALVNEYGENKVSEKVRNTYKSKPDCKVKVLWVVEPRKTGYIK 227
Query: 227 KDK----GNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
D+ F S V VDE E FP+++ R+R +YG ALP
Sbjct: 228 GDRQLMPKEMPFASYHVEVDEKIILRETGYNEFPFVIPRFRKIPHSVYGTGQVSIALPDA 287
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEA--KQRNFDLKPGYMNIGALSREGRSLFQPVQF 340
+ N+ + + + +S V + R L G + + + +
Sbjct: 288 KTANKLMRDTLRSAEISTLGMYAGVDDGTFNPRTVRLGGGKIIVVNDVNS----LKRIDD 343
Query: 341 GNPLPYHEE-LNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQ 399
G + L L+ +IR + D Q D A +A E + +GPL G Q
Sbjct: 344 GKGYQVGVDLLAHLQGAIRKKMMADQLQPADGPA-MTATEVHVRVDLIRQQLGPLYGRWQ 402
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVN 459
+E + ++ R + G + E L ++ S L + QQ E V + + +
Sbjct: 403 AELLTPLLERTFGLAYRAGVIGEAPEEM--QGRNLSFKFISALARSQQLEEVTAIERFLQ 460
Query: 460 TVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEE 519
+ + DPS +D++D D V++ S P ++R +++ IR+QR+ ++ +
Sbjct: 461 GLSSVA--ELDPSILDNVDMDAVAQVSGMGLGVPTAILRTQDQIDAIRKQRQEAQQQAAQ 518
Query: 520 QHLQQQLQQTSQDIGAKAAGRAMEKKLTHD 549
Q +Q L Q + A G+ +E +LT +
Sbjct: 519 QEQEQALAQPLAN----AVGKGLESELTSE 544
>gi|282848877|ref|ZP_06258267.1| hypothetical protein HMPREF1035_1386 [Veillonella parvula ATCC
17745]
gi|282581382|gb|EFB86775.1| hypothetical protein HMPREF1035_1386 [Veillonella parvula ATCC
17745]
Length = 575
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 116/517 (22%), Positives = 209/517 (40%), Gaps = 44/517 (8%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN----------AQLRMWDTTGSEACIK 56
++ +F+ L N + + L + P+ ++ + E+C
Sbjct: 24 TKLRKKFSQLFNAQQRYVNKWKHLRDYQLPFIGQFDGEEDQSEPYNGKILNPVAWESCQI 83
Query: 57 LSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRS 116
+S + S +TPP +KW L + A + +V E D+ + L+ ++S
Sbjct: 84 FASGVMSGLTPPSRKWFKLT--------MENIDVAANSQVAELLDEREEILYAVL--AKS 133
Query: 117 GFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVY 176
F + Y + G + AD E G+R+ S P+ +S N + +V+
Sbjct: 134 NFYSVVHQVYMEL-PMGQAPMGIFADS-----ESGVRFTSYPIGTYAISTNSKEIVNIFG 187
Query: 177 REFTFTVDQIVSKWGDKVLSSKMKSALARNE--NERFTIIHAVYPKSLTDKKKDKGNKGF 234
R++ TVDQIV ++G + +K+ + FT+ V P K + N +
Sbjct: 188 RKYKMTVDQIVEQFGYENCPDNIKNIYDNGNSLQQSFTVNWLVEPNKDRKDKLGRRNMPY 247
Query: 235 HSKFVSVDE--NRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNEL 292
S + + +P + R+ YG+ A A P + L + +
Sbjct: 248 SSIYWVEGSNSDEVLYHGGFEEWPIPIARHTSMDLNGYGKGAAWFAQPDSQMLQKLEFDY 307
Query: 293 AQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG--NPLPYHEEL 350
L + PP A S+ +L PG + EG+ +P+ N ++
Sbjct: 308 LTAVELGVKPPMQAPSDVIS-TVNLYPGGIT----EIEGQHKVEPMFAVQSNLQDIQNKI 362
Query: 351 NRLKESIRSLFLLDLFQVLD--DKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIS 408
++SI+ + DLF +LD DK +A E ME+T+EK +GP++ L SEF+ +I
Sbjct: 363 AVTEDSIKRAYSADLFLMLDQIDKGQMTAREVMERTQEKLQQLGPVVERLLSEFLNPIIE 422
Query: 409 RELDILDSQGNLPECEGA---DNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELG 465
R +LD G P E D +K+EY SPL + Q+ S+ + Q ++ L
Sbjct: 423 RVYAVLDRAGVFPPVEDEELLDQLNGQEVKIEYISPLAQAQKMSSLVNIEQYFAFIMSLA 482
Query: 466 VKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAE 502
+P+ ++ + + + PA +IR E
Sbjct: 483 --QANPNIVNKFNFEEAANTYGVNLGVPAKIIRSDDE 517
>gi|292670769|ref|ZP_06604195.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292647390|gb|EFF65362.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 567
Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats.
Identities = 101/523 (19%), Positives = 201/523 (38%), Gaps = 40/523 (7%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLR------------MWDTT 49
+ + + ++ + +R + ++L+ ++ P + + D
Sbjct: 14 DSDAIRRKKNLVTQMMTERTQFESTWKQLSKYINPTRGRFDDEDKTQDGRRRDYFLLDPY 73
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
EA K ++ L S +T P + W L KE A V+ W ++ D L G
Sbjct: 74 PMEASGKCAAGLHSGLTSPSRPWFALG--------LQDKELAEYHTVKLWLEECQDVLMG 125
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
++S L + + +FGTG + D + G+ +V+ +
Sbjct: 126 IY--AKSNIYNMLLNIEAELTQFGTGAALLLEDFN-----TGVWARPYTCGEYAGNVDAR 178
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSAL-ARNENERFTIIHAVYPKSLTDKKKD 228
V R+F Q+V ++G+ V+S +++A A+N + F + + + + +
Sbjct: 179 GRVVQFARKFKLNAWQMVDEFGEDVVSDAVRNAYRAKNLKDYFPVTMLIEKNADYNPDSN 238
Query: 229 KG-NKGFHSKFVSVDE-NRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLN 286
N + S + + + F + P+++ R+ V A+ IYG P AL +L
Sbjct: 239 ALLNFKYKSYYFEDSQTDVFLKVSGYHEVPFLMPRWTVIANGIYGVGPGHNALGNCMQLQ 298
Query: 287 ETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPG--YMNIGALSREGRSLFQPVQFGNPL 344
+ + P I S + + PG + ++ R L++ G+
Sbjct: 299 KIEKINMRLLEHRSDPALIVPSSVGK--VNRLPGKETLVPDSMINGIRPLYEA--TGDRG 354
Query: 345 PYHEELNRLKESIRSLFLLDLFQVL--DDKASRSAAESMEKTREKGAFVGPLIGGLQSEF 402
+ + ++ I + F DLF +L D +A E E+ EK + P++ + +E
Sbjct: 355 EVMQTIQYKQQQIGAAFYNDLFVMLAQQDNPQMTAREVAERHEEKLLMLSPVLEQMHNEV 414
Query: 403 IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVV 462
+ + R +I G LP +K E+ S L + Q+A + + +
Sbjct: 415 LAPLTRRAFEICYRNGLLPPLPEELRGQEGSIKAEFISLLAQAQKAVGTNAMEKTLAIAG 474
Query: 463 ELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVED 505
L P MD++D D R + TP ++RD +V+
Sbjct: 475 NL--MGASPEIMDNLDLDAAIREHAQMSGTPETIMRDEQDVQK 515
>gi|83313332|ref|YP_423596.1| hypothetical protein amb4233 [Magnetospirillum magneticum AMB-1]
gi|82948173|dbj|BAE53037.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
Length = 545
Score = 431 bits (1109), Expect = e-118, Method: Composition-based stats.
Identities = 112/503 (22%), Positives = 201/503 (39%), Gaps = 45/503 (8%)
Query: 9 IQDRFNYLKNQRGELNYWMEELTGFLYPYKN----------NAQLRMWDTTGSEACIKLS 58
+ R+ K +R +E + P ++ R++D T + +L+
Sbjct: 33 LLRRYRKAKERRSTWESHWQECYDYALPLRDGMFHSSVPGERKADRLFDGTAPDCVDQLA 92
Query: 59 SLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGF 118
+ L S +TPP +W GLA +A + ++ + E V + F RS F
Sbjct: 93 ASLLSELTPPWAQWFGLAAGDQMPEA----DRDQAAPLLERIAAVMQSHF-----DRSNF 143
Query: 119 VGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYRE 178
+ Y V GT E G R+ SVPL V + +D +R
Sbjct: 144 AIEMHQCYLDAVTGGTASLMFEEAP--PGEPSAFRFTSVPLGQVVLEEGPAGRLDVTFRR 201
Query: 179 FTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKF 238
+V + +++ VL ++ A A + + R ++ AV P +G + +
Sbjct: 202 SELSVAALKARFPRAVLPREVIKAAADDPDLRLGVVEAVVPV--------RGGYSYAAVL 253
Query: 239 VSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRL 298
+ Q ++ P++ R+ E+YGRSP M+ALP I+ N+ V + + +
Sbjct: 254 DDDGSDLVLGRGQFSSSPFLNFRWLKAPGEVYGRSPVMKALPDIKTANKVVELVLKNATI 313
Query: 299 SLHPPTIAVSEAKQRN--FDLKPGYMNIGALSREG-RSLFQPVQFGNPLPYHEELNRLKE 355
++ A + L PG + A+ G + L P +F L+ L+
Sbjct: 314 AVTGIWQADDDGVLNPANIKLVPGTIIPKAVGSAGLQPLTAPGRFDT---SQLVLDDLRG 370
Query: 356 SIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILD 415
IR + D + +A E +++ + +G G LQSE + +I R + IL
Sbjct: 371 RIRHALMGDKL-SQPASPALTATEVLQRADDMARLLGATYGRLQSELLTPLILRAIHILR 429
Query: 416 SQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMD 475
+G +P + + ++Y SPL + Q + L + + LG PS +
Sbjct: 430 RRGEIPPLQ----VDGRTIDLQYRSPLAQNQGRRDARNVLNWLGALSSLG-----PSALA 480
Query: 476 HMDTDRVSRFSLWATNTPAVLIR 498
+D+D +R+ A N P+ LIR
Sbjct: 481 TVDSDAAARWLARAFNVPSELIR 503
>gi|144899435|emb|CAM76299.1| head-to-tail joining protein [Magnetospirillum gryphiswaldense
MSR-1]
Length = 502
Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 118/516 (22%), Positives = 208/516 (40%), Gaps = 46/516 (8%)
Query: 9 IQDRFNYLKNQRGELNYWMEELTGFLYPYKN----------NAQLRMWDTTGSEACIKLS 58
++ R+ K +R +E + P ++ R++D T ++A +L+
Sbjct: 17 LRQRYRKAKERRATWEAHWQECYDYALPLRDAVLHQPNPGEKKGDRLFDGTAADAVDQLA 76
Query: 59 SLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGF 118
+ L S +TPP +W GL ++A ++V D+V L + RS F
Sbjct: 77 ASLLSELTPPWAQWFGLTAG-------PDLDEAERQQVAPLLDKVGAILQSHFD--RSNF 127
Query: 119 VGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYRE 178
+ Y VV GT C E + G R+ +VPL+ + +DS +R
Sbjct: 128 AVEMHQCYLDVVTGGTACLLFEEA--QPGEASAFRFTAVPLAQAVLEEGPDGKLDSSFRR 185
Query: 179 FTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKF 238
T+ + ++ L + + RF +I AV P +G+ + +
Sbjct: 186 SELTLAALRQRFPAAQLDPSLIRRGEEDPQARFAVIEAVIPN-------QRGHYDYAAIL 238
Query: 239 VSV--DENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFG 296
D+ E + P+I R+ EIYGRSP M+ALP I+ N+ V + +
Sbjct: 239 EDATDDDEALLAEGRFGQSPFINFRWLKAPGEIYGRSPVMKALPDIKTANKVVELVLKNA 298
Query: 297 RLSLHPPTIAVSEAKQRN--FDLKPGYMNIGALSREGRSLFQPVQFGNPLPY-HEELNRL 353
+++ A + L PG + A+ G QP++ L+ L
Sbjct: 299 TIAVTGIWQADDDGVLNPANIKLIPGTIIPKAVGSAG---LQPLESPGRFDISQLVLDDL 355
Query: 354 KESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDI 413
+ IR L D D +A E +E++ + +G G LQSE + +I R + I
Sbjct: 356 RGRIRHALLADKLG-QADNPKMTATEVLERSADMARLLGATYGRLQSELLTPLILRAVTI 414
Query: 414 LDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSC 473
L +G +P L++++Y SPL + Q + L ++ + +LG P+
Sbjct: 415 LRRRGEIPPL----LVDGHLVELQYRSPLAQSQAQRDAHNVLSWLSALAQLG-----PAG 465
Query: 474 MDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQ 509
M +D +++ A N PA L+ E++ Q
Sbjct: 466 MAVVDPAAAAQWLGRAFNIPADLMVAPQNPENVHVQ 501
>gi|48696640|ref|YP_024419.1| hypothetical protein VP2p04 [Vibrio phage VP2]
gi|48696684|ref|YP_024978.1| hypothetical protein VP5_gp03 [Vibrio phage VP5]
gi|40806147|gb|AAR92065.1| hypothetical protein [Vibrio phage VP5]
gi|40950038|gb|AAR97629.1| hypothetical protein [Vibrio phage VP2]
Length = 547
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 112/557 (20%), Positives = 213/557 (38%), Gaps = 44/557 (7%)
Query: 8 DIQDRFNYLKNQRGELNYWMEELTGFLYPYKN--------------NAQLRMWDTTGSEA 53
I R ++LK R + + + ++ P ++ N ++D+T +
Sbjct: 5 KIVKRLDFLKTDRKNVEQIWDCIRKYIMPMRSDFFSDLRSEGSINWNQNREVFDSTAGDG 64
Query: 54 CIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRER 113
LSS L +T P KW LA F KE + R+W + T ++ +
Sbjct: 65 LETLSSSLHGSLTSPATKWFELA--------FRDKELNSDDECRKWLENATHDVYSALQD 116
Query: 114 SRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVD 173
S F Y + +G E D DE+G + + S P+ + Y + + V
Sbjct: 117 --SNFNLEANETYIDLCGYGNAIMVEEEDEDEEG---SVVFQSSPIQDSYFEEDSRGQVV 171
Query: 174 SVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE---RFTIIHAVYPKSLTDKKKDKG 230
+ YR F +T QI ++GD+ + N+ + ++ V+ + + ++ G
Sbjct: 172 NFYRVFRWTPAQIYDRFGDEGTPEAIIKKAKEASNQAALKQEVVMCVFTRYDKKQNRNAG 231
Query: 231 ------NKGFHSKFVSVDEN-RFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIR 283
+ F K++ + + EE P R+R A +G P+ ALP +
Sbjct: 232 TVLAPTERPFGKKWILKEGAVQLGEEGGYYEMPAYAIRWRKSAGSQWGFGPSHLALPDVL 291
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP 343
N V + + + P + + DL + + + +F
Sbjct: 292 TANRYVELVLRSSEKVIDPAIMVTERGLISDIDLGASGLTVVRDMESMKPFESRARFDV- 350
Query: 344 LPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFI 403
+L L+ ++R ++ +D Q+ D + +A E + +GP +G L+++F+
Sbjct: 351 --SSIQLTDLRSAVRRIYYVDQLQM-KDSPAMTATEVQVRYELMQRLLGPTLGRLENDFL 407
Query: 404 GAMISRELDILDSQGNLPECEGA-DNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVV 462
MI R +I G L E + + + YT PL + Q+ + AS + +
Sbjct: 408 SPMIQRTFNIRFRAGKLGELPSKLLESGKAAMDIVYTGPLSRAQKIDQAASIERWAGSTA 467
Query: 463 ELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHL 522
+L +P +D D D + R P L+R A+V IR+ R ++ E+ +
Sbjct: 468 QLA--EINPEVLDIPDWDEMVRMLGSLLGAPQTLMRPKAKVTSIRKNRSQTQQKAEQAAI 525
Query: 523 QQQLQQTSQDIGAKAAG 539
+ + G A
Sbjct: 526 AEAEGNAMEAQGKGQAA 542
>gi|290968647|ref|ZP_06560185.1| hypothetical protein HMPREF0889_0287 [Megasphaera genomosp. type_1
str. 28L]
gi|290781300|gb|EFD93890.1| hypothetical protein HMPREF0889_0287 [Megasphaera genomosp. type_1
str. 28L]
Length = 577
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 111/516 (21%), Positives = 215/516 (41%), Gaps = 40/516 (7%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNA-----------QLRMWDTTGSEAC 54
+ + L Q+ + +++ + PY +++ ++A
Sbjct: 26 KQSCVKMLDSLFKQQQKYIPLWKDIRNYELPYDGELGDDVIGAPAMHDEEIYNGITAQAR 85
Query: 55 IKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERS 114
++ + S +TPP +KW F+ A L ++ + E C+ + L S
Sbjct: 86 DTFAAGIQSGLTPPSRKWFR----FAPTDASLDNNIDVARVLDERCEIMEGVL------S 135
Query: 115 RSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDS 174
+S F + S Y + FG + AD E+G+ +++ + + + Q +++
Sbjct: 136 QSNFYNVIHSAYKEL-PFGQSPVGVFAD------EKGVYFVNYTIGTYALGADGQGRINT 188
Query: 175 VYREFTFTVDQIVSKWGDKVLSSKMKSALARNE--NERFTIIHAVYPKSLTDKKKDKGNK 232
R+ + QIVS +GD V++ ++ A+ N + +T+ VYP +
Sbjct: 189 FARKVKMSAAQIVSLYGDSVVTDSVREAVKANGGHEDYYTVCWLVYPNPKAKPTGGNHDM 248
Query: 233 GFHSKFVSVDEN--RFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVN 290
F S + K + V RY V+ + YG PA +ALP R L +
Sbjct: 249 KFLSVHWLEGSDPNSLLAAKGFEEWAIPVARYNVKGIDAYGIGPAWDALPESRMLQKMEY 308
Query: 291 ELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEEL 350
+ A LS+ PP + +E + R +L PG + + ++
Sbjct: 309 DGAIALELSIKPPLVGPAELQGR-INLFPGAYTPSINPNDNVHSIYSGGL-DLNSLQAKI 366
Query: 351 NRLKESIRSLFLLDLFQVLD--DKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIS 408
++++ I+ ++ DLF +L+ ++ +A E M + +EK A +GP+I LQ+EF+ +I
Sbjct: 367 TQIEDRIKRIYSTDLFLMLNELNRGQMTAQEVMARNQEKMAQLGPVIERLQNEFLSDIIE 426
Query: 409 RELDILDSQGNLPECEG--ADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
R ++L+ P +K+EY SPL + Q+ + + QGV+ V +L
Sbjct: 427 RVYNLLERNQVFPPLPDDVQQTLQGQEIKIEYLSPLAQAQKMSGLTAIEQGVSFVGQLA- 485
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAE 502
DP+ + ++ D+ L P+ +IR E
Sbjct: 486 -QLDPNVILRVNFDKAVENYLDKLGVPSTMIRTEDE 520
>gi|23015763|ref|ZP_00055531.1| hypothetical protein Magn03010200 [Magnetospirillum magnetotacticum
MS-1]
Length = 543
Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats.
Identities = 111/510 (21%), Positives = 200/510 (39%), Gaps = 45/510 (8%)
Query: 9 IQDRFNYLKNQRGELNYWMEELTGFLYPYKN----------NAQLRMWDTTGSEACIKLS 58
+ R+ K +R +E + P ++ R++D T + +L+
Sbjct: 33 LLRRYRKAKERRSTWESHWQECYDYALPLRDGMFHAGVPGERKADRLFDGTAPDCVDQLA 92
Query: 59 SLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGF 118
+ L S +TPP +W GL +A E + + E V + F RS F
Sbjct: 93 ASLLSELTPPWAQWFGLTAGDQMPEA----ERDQVAPLLERVAAVMQSHF-----DRSNF 143
Query: 119 VGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYRE 178
+ Y V GT E G R+ SVPL V + +D +R
Sbjct: 144 AIEMHQCYLDAVTGGTASLLFEEAA--PGEASAFRFTSVPLGQVVLEEGPAGRLDVTFRR 201
Query: 179 FTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKF 238
+V + +++ VLS + A A + + R ++ AV P +G + +
Sbjct: 202 SEMSVAALKARFARAVLSGHLIKAAADDPDLRLGVVEAVIPV--------RGGYSYAAVL 253
Query: 239 VSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRL 298
+ ++ P++ R+ E+YGRSP M+ALP I+ N+ V + + +
Sbjct: 254 DDESSDVVLGRGSFSSSPFLNFRWLKAPGEVYGRSPVMKALPDIKTANKVVELVLKNATI 313
Query: 299 SLHPPTIAVSEAKQRN--FDLKPGYMNIGALSREG-RSLFQPVQFGNPLPYHEELNRLKE 355
++ A + L PG + A+ G + L P +F L+ L+
Sbjct: 314 AVTGIWQADDDGVLNPANIKLVPGTIIPKAVGSAGLQPLTAPGRFDT---SQLVLDDLRG 370
Query: 356 SIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILD 415
IR + D S +A E ++++ + +G G LQSE + +I R + IL
Sbjct: 371 RIRHALMGDKL-SQPASPSLTATEVLQRSDDMARLLGATYGRLQSELLTPLIMRAIHILR 429
Query: 416 SQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMD 475
+G +P + + ++Y SPL + Q + L + + LG P+ +
Sbjct: 430 RRGEIPPL----SVDGRVFDLQYRSPLAQNQGRRDARNVLSWLGALSSLG-----PAALA 480
Query: 476 HMDTDRVSRFSLWATNTPAVLIRDTAEVED 505
+D +R+ A N P+ L+R +E +
Sbjct: 481 TVDAAAAARWLGRAFNVPSELVRPASEQQA 510
>gi|42526662|ref|NP_971760.1| head-to-tail joining protein, putative [Treponema denticola ATCC
35405]
gi|41816855|gb|AAS11641.1| head-to-tail joining protein, putative [Treponema denticola ATCC
35405]
Length = 560
Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats.
Identities = 126/525 (24%), Positives = 227/525 (43%), Gaps = 48/525 (9%)
Query: 8 DIQDRFNYLKNQRGELNYWMEELTGFL---------------YPYKNNAQLRMWDTTGSE 52
DI+ F+ LK++R +++ ++ P ++ + SE
Sbjct: 13 DIKGLFDILKDKRSMHEAEWQDVCTYIGSNVFDWSENKEEIKRPKRHTGR-------PSE 65
Query: 53 ACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRE 112
KL S L P W L+ + + E V++W +Q L+ E
Sbjct: 66 YLKKLVSGLMGYTISPNVTWLKLSLNNT--------EMLEYAGVKDWLEQSEKALY--EE 115
Query: 113 RSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV 172
+R+ + F ++ FG G ++ E IR++++ +Y++ N +
Sbjct: 116 FNRNNLYSQVSLFISNAASFGHGVMLIDE-----KKENSIRFLTIAEPEIYIAENEYGDI 170
Query: 173 DSVYREFTFTVDQIVSKWGDKVLSSKMKSALA--RNENERFTIIHAVYPKSLTDK-KKDK 229
D+V+R F+ TV I++++G++ +S ++K+ + +N+ I+HAV P+ D+ K D
Sbjct: 171 DTVFRYFSMTVKNIIARFGEENVSEQIKNDAKDIKGKNKEIKILHAVLPRDDYDESKLDG 230
Query: 230 GNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETV 289
N F S ++ +D N EE PY V + YG SPA EA+P +R LN+
Sbjct: 231 KNMEFASYYIDMDNNTILEESGYYELPYSVFIWEKETSSAYGGSPAREAIPDMRLLNKVE 290
Query: 290 NELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYH-E 348
+ +L PP + + P N + P+ G P E
Sbjct: 291 EARLKLAQLVSEPPMNVPDSMRGFE-SVVPAGYNYY---ERPDMIMTPINIGANFPITLE 346
Query: 349 ELNRLKESIRSLFLLDLFQVLD-DKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
+ ++ +R F +D +L A ++A E +E EK A + LI Q++ + ++
Sbjct: 347 TIQDIESRLRDKFHVDFMLMLQAQTAQKTATEVIELQGEKSALLSSLIVN-QNKALSEIV 405
Query: 408 SRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVK 467
R L+I+ QG PE N ++L V++ PL + Q+ +Q + + +
Sbjct: 406 IRTLNIMYRQGRFPEPPNILNGSDAVLNVDFVGPLAQAQKRYHQTGGVQTSLAISQP-II 464
Query: 468 TGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREV 512
+P +D++DTD++ + L P IR+ EVE IRQQR
Sbjct: 465 QMNPEVLDYIDTDKLLKNVLDTNGFPQSAIREDDEVEKIRQQRAE 509
>gi|294648400|ref|ZP_06725899.1| phage protein [Acinetobacter haemolyticus ATCC 19194]
gi|292825705|gb|EFF84409.1| phage protein [Acinetobacter haemolyticus ATCC 19194]
Length = 558
Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 118/572 (20%), Positives = 225/572 (39%), Gaps = 46/572 (8%)
Query: 5 SAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN----------------AQLRMWDT 48
+A+ + R + LK+ R + ++ + P + A+ ++DT
Sbjct: 2 NAQQLLKRLSQLKSDRIKHEAHWKDCYKYCAPERQQSFADASATALEQERKQARTDLFDT 61
Query: 49 TGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLF 108
T E L S + S T P W S + L + +W QV LF
Sbjct: 62 TSVEGIQLLVSSIVSGTTSPVSIWFKSVPSGVDTPSQL-------TEGEQWLSQVDQFLF 114
Query: 109 GFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVN- 167
R S F + F T +V G Y D + G + + + N Y+S
Sbjct: 115 --RNIHASNFDSEVTDFLTDLVVAGWAVLY----ADTNREKGGFTFNTWSIGNCYISSTQ 168
Query: 168 HQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLT---- 223
++D++YREF + +QIVS++G +S K+++AL + +++FT++ A++P+
Sbjct: 169 ANGLIDTIYREFELSAEQIVSEFGIDNVSDKVRTALEKKPDQKFTLVQAIFPRDSKLIKG 228
Query: 224 -DKKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
+ K+ + F S + +E FP +V R++ D YG +
Sbjct: 229 EEGKRVSTSMPFASYTIEAQSKHILKESGFEEFPCVVSRFKKIPDSHYGLGMGSMVISDA 288
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRN--FDLKPGYMNIGALSREGRSLFQPVQF 340
+ N+ + Q L+L IA ++ ++P + + L
Sbjct: 289 KTANQIMKLSLQTAELNLGGLWIAQNDGNINPHTLRIRPNAIIAANTVDSIKRLDTGSAS 348
Query: 341 GNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQS 400
+ L + I+ + D + +A E + + +G + +QS
Sbjct: 349 VGLG--LDFLQHFQAKIKRTLMSDQLTP-QGSSPLTATEIQARVQVYRNQLGSIFSRMQS 405
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E++ ++ R + G LP S + + +P+ Q+ E V + +
Sbjct: 406 EYLQVLLERTWGLAMRSGVLPPAPEEL-MQASRISFNFINPMAASQKLEWVTAIQNLMLN 464
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQ 520
V ++ D + MD+++ D + + A + P IR E+ ++RQ ++ Q++ M+EQ
Sbjct: 465 VSQMA--QIDQTVMDNLNLDAMVQVMADALSVPVEAIRTDEEIAELRQAKQEQQQAMQEQ 522
Query: 521 HLQQQLQ-QTSQDIGAKAAGRAMEKKLTHDMM 551
QQ L Q Q A +A K +T D +
Sbjct: 523 QQQQALMSQVGQTGLDIAKDQA--KNMTPDQL 552
>gi|46580131|ref|YP_010939.1| hypothetical protein DVU1721 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46449547|gb|AAS96198.1| hypothetical protein DVU_1721 [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233876|gb|ADP86730.1| hypothetical protein Deval_1575 [Desulfovibrio vulgaris RCH1]
Length = 550
Score = 415 bits (1066), Expect = e-113, Method: Composition-based stats.
Identities = 105/569 (18%), Positives = 213/569 (37%), Gaps = 43/569 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKN------------NAQLRMWDT 48
M K++ + +++ R +++ +L P + + + +
Sbjct: 1 MRSALLKELSEVAEHVEGLRKRREAQWRDISEWLMPMRGIYEGQDGADVIASRGKGLLNR 60
Query: 49 TGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLF 108
G+ A ++ ++ +TP W + R W D V ++
Sbjct: 61 EGTRALKVAATGMTGGMTPAALPWFRWSLRD--------DVQNERTGARAWLDTVEASIN 112
Query: 109 GFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNH 168
GF + + + FG + D + L R+ S + ++++
Sbjct: 113 SVLR--ACGFYQAIHACNMEFLAFG--PLLLFQDNSQGAL---CRFESCTVGTWAVALDA 165
Query: 169 QNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVY-PKSLTD-KK 226
+D+V R T Q+ ++G L+ L N+ + V P++ +
Sbjct: 166 DGGLDTVVRRLKLTARQMEQRFGRDRLTPATVKLLETNKGHERVEVVHVVRPRTERQHGR 225
Query: 227 KDKGNKGFHSK-FVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRL 285
D N F S + + + E PY Y ++YG +P + LP +++L
Sbjct: 226 IDARNMPFASYMYEATGADDVLSESGYHEMPYFFAAYD-DTLDLYGSAPGDDCLPDVKQL 284
Query: 286 NETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNI--GALSREGRSLFQPVQFGNP 343
E + + ++PPT + KQR ++ PG N G L++ N
Sbjct: 285 QELEKQKLVGLQKVINPPTRKPASFKQR-LNVNPGGENAVSGGDPHGIGPLYEVRIDLNQ 343
Query: 344 L--PYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
+ ++R++++ + + D+ L K + E +E+ RE+ +GP + +++
Sbjct: 344 VREEIATVVDRIRQTTMASYFADMPLELRPK-DMTYGEYLERKRERLQLMGPSLEAYEAK 402
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+ +I R +LD G LP A V+++ + Y SPL + + S + V
Sbjct: 403 VLTPVIFRTFALLDRAGMLPPPPDALG-EVAVVDISYISPLAQALRQTGAESTRALLMDV 461
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQH 521
++L DP +D +D D+ P ++R +V +RQQR+ + +
Sbjct: 462 MQLA--EADPGVLDKVDMDQAVDELAKGIGAPGRVVRSDEDVAAMRQQRDEAKAREAQA- 518
Query: 522 LQQQLQQTSQDIGAKAAGRAMEKKLTHDM 550
Q+ Q + A R L HD+
Sbjct: 519 --QEAITAMQGLAKVAGTRTGPGTLAHDL 545
>gi|239787361|emb|CAX83837.1| Head-to-tail joining protein [uncultured bacterium]
Length = 524
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 114/517 (22%), Positives = 199/517 (38%), Gaps = 51/517 (9%)
Query: 1 MNQRSAKD----IQDRFNYLKNQRGELNYWMEELTGFLYPYKN----------NAQLRMW 46
MN ++ D + RF + +R +E F P + R++
Sbjct: 1 MNGQNDPDAQRVVLKRFEKARERRNVWEGHWQECYDFALPSRGGPLLSSQPGAKRTDRLF 60
Query: 47 DTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDT 106
D T + +L++ L + +TPP +W GLA A +E + V E +
Sbjct: 61 DGTAPDCVDQLAASLLAQLTPPWAQWFGLA----AGPDLTPEEREVAAPVLEKAGAALQS 116
Query: 107 LFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSV 166
F RS F + Y +V GT E G R+ ++PL+ + +
Sbjct: 117 HF-----DRSNFAIEMHQCYLDLVTAGTASLLFEEAP--LGSASAFRFTAIPLAQLALEE 169
Query: 167 NHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKK 226
+ + +D+ +R T+ I ++ L M + + RF ++ AV P
Sbjct: 170 SVEGRLDTTFRSSEMTISAIRERFPKAQLPESMGRKSKDDADARFKVVEAVLP------- 222
Query: 227 KDKGNKGFHSKF--VSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRR 284
++ +H+ E + P+I R+ E+YGRSP M++LP I+
Sbjct: 223 -ERHGYAYHAILDGEGTGGAETLAEGRFEMSPFINFRWLKAPGEVYGRSPVMKSLPDIKT 281
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRN--FDLKPGYMNIGALSREGRSLFQPVQFGN 342
N+ V + + +++ A + L PG + A+ G P++
Sbjct: 282 ANKVVELVLKNATIAVTGIWQADDDGVLNPANIKLVPGTIIPKAVGSAG---LTPLETPG 338
Query: 343 PLPY-HEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
L L++ I L D D + +A E +E++ E +G G LQSE
Sbjct: 339 RFDISQLMLTDLRQRISHALLADRLG-QIDAPNMTATEVLERSAEMARLLGATYGRLQSE 397
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+ ++ R + IL +G +P D + L+ Y SPL + E + LQ + V
Sbjct: 398 LLTPLVMRAVAILKRRGEIPGLS-IDGHQIELI---YKSPLANERGREDAKNTLQWLTAV 453
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIR 498
+ G P +D +R+ A N PA L+R
Sbjct: 454 MSFG-----PPANQVVDLGAAARWLAKALNVPAELLR 485
>gi|119386466|ref|YP_917521.1| putative head-tail connector protein [Paracoccus denitrificans
PD1222]
gi|119377061|gb|ABL71825.1| putative head-tail connector protein [Paracoccus denitrificans
PD1222]
Length = 558
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 107/528 (20%), Positives = 191/528 (36%), Gaps = 40/528 (7%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN-----------AQLRMWDTT 49
+NQ+ K + R + + EL + P + R+ D T
Sbjct: 5 VNQQLRKTLDYRRQAMNQEFDYWQGHFRELRDAIQPTRGRFEASERRSDSSINKRILDNT 64
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
A L + L S +T P + W L S D +V++W +V ++
Sbjct: 65 AQMALRTLRAGLMSGVTSPSRPWFRLGLRGST-------ADEAEFEVKDWLHEVQRRMYE 117
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
S L + Y + +GT + D E+ +R ++ + + +
Sbjct: 118 VMR--GSNIYRMLDTTYGDLGLYGTAANLVVPDF-----EDVVRGHNLQVGRFRLGEDGN 170
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNEN-ERFTIIHAVYPKSLTDKK-K 227
V ++YRE V IV WG +S ++ A E + FTI H + ++ D K
Sbjct: 171 GRVIALYRELKMPVRGIVETWGLDAVSQSVRRAWDTGEYYQTFTICHMIDKRADGDPKAM 230
Query: 228 DKGNKGFHSKFVSVD--ENRFFEEKQIATFPYIVGRYRVRADEIY-GRSPAMEALPTIRR 284
+ + S + +D +F + P + R+ E + SP M AL R
Sbjct: 231 QSSGRPWASIYWEMDAPSGQFLQIGGHRVKPLLAPRWEQVEGEAWSASSPGMVALGDARS 290
Query: 285 LNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP- 343
L + + A + +PP I + F PG A +P P
Sbjct: 291 LQVSQEQKAIAIQKMHNPPLIGGAVQGGMFFKNVPGGFTAMATQDLSTGGIRPAYEVRPD 350
Query: 344 -LPYHEELNRLKESIRSLFLLDLFQV----LDDKASRSAAESMEKTREKGAFVGPLIGGL 398
++ + + F DLFQ+ LD ++ +A E E+ EK +GP++ L
Sbjct: 351 IQGLIIDIQESQRRVEVAFYKDLFQMTALALDGRSQITAREIAERHEEKLMALGPVLESL 410
Query: 399 QSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGV 458
E + +I + LPE +KVEY S L + Q+A + + + +
Sbjct: 411 DHELLQPLIEATFAYMQEADILPEAPEGIVGNP--IKVEYISLLAQAQKAIGIGAIERTI 468
Query: 459 NTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDI 506
L P +D +D +++ R P ++ E+ ++
Sbjct: 469 GFAGTLA--QIKPDVIDMIDGEQMMREFADQVGGPPGILLSPDELREV 514
>gi|260557979|ref|ZP_05830191.1| Bbp21 [Acinetobacter baumannii ATCC 19606]
gi|260408489|gb|EEX01795.1| Bbp21 [Acinetobacter baumannii ATCC 19606]
Length = 555
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 101/522 (19%), Positives = 203/522 (38%), Gaps = 35/522 (6%)
Query: 9 IQDRFNYLKNQRGE-LNYWMEELTGFLYP-----------YKNNAQLRMWDTTGSEACIK 56
++ RF+ + R ++ + EL + P + +A ++ D TG ++
Sbjct: 1 MKKRFDAVWQLRVNDMDDYCAELALHVLPAAIKTIKNQEKHDRSAWSKIVDNTGKDSLKT 60
Query: 57 LSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRS 116
L++ + S P +KW L + + Q + +VR+W V D + S+S
Sbjct: 61 LAAGMVSGTCSPSRKWFTLQAADESLQ--------KDIEVRQWLKAVEDACYVAF--SKS 110
Query: 117 GFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVY 176
+ Y FG G + + I + ++ + N + VY
Sbjct: 111 NVYRTVHHIYMQEGAFGIGAALAPEH-GRNSKAQLMDLIPLTFGEFAITTDEFNKPNGVY 169
Query: 177 REFTFTVDQIVSKWGDKVLSSKMKSALA-RNENERFTIIHAVYPKSLTDKKKDKGNKGFH 235
R+F T +V +G +S +K+A +N + F + HA+Y + K N F
Sbjct: 170 RKFKLTSINMVKYFGLDNVSDAIKNAFENKNYEQEFEVCHAIYERVDA-KGYGPKNMPFA 228
Query: 236 SKFVS-VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQ 294
S + ++ E + F I GR+ V + ++YG PA + + +R L + ++A
Sbjct: 229 SIYYEPSSSDKLLRESGLMGFQVICGRWTVSSSDVYGEGPASDCIGDLRALQKGHQQIAV 288
Query: 295 FGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYH---EELN 351
+ PP + K + P + S + + ++
Sbjct: 289 GVDYQVRPPLLLPDYLKGHERETLPNGIAFYQASPTSQVAQVQAMLNVQFDLNGVMAQIA 348
Query: 352 RLKESIRSLFLLDLFQVLD--DKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISR 409
+ +E ++ F DLF +LD DK +A E E+ EK +GP++ E + ++
Sbjct: 349 QCQERVKRAFHTDLFMMLDAFDKGKMTATEVYERKSEKMLMLGPVVERQIDELLRPLVEI 408
Query: 410 ELD-ILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKT 468
++ +L + L + + + +++ + S L Q++ A + + + ++
Sbjct: 409 CVERVLANSEYLRQIA-PEAIQNADVEINFVSILALAQKSSGSAILERALAMIGQVA--Q 465
Query: 469 GDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQR 510
DP +D +DTD+ + R V+ IR R
Sbjct: 466 VDPQVLDKVDTDKFMDEYAEINGVSPDIFRPQRIVDQIRSDR 507
>gi|225158777|ref|ZP_03725094.1| hypothetical protein ObacDRAFT_8203 [Opitutaceae bacterium TAV2]
gi|224802612|gb|EEG20867.1| hypothetical protein ObacDRAFT_8203 [Opitutaceae bacterium TAV2]
Length = 562
Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 118/563 (20%), Positives = 221/563 (39%), Gaps = 46/563 (8%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN------------AQLRMWDTTGSEA 53
A+D+ R+ +++ + ++ P K + ++D+T +E+
Sbjct: 10 AEDLIGRYEAGLSRQANWRSRWHDAARYILPSKGDILSMGDKHGGEAQTTDIYDSTANES 69
Query: 54 CIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRER 113
+ ++ L S + P G+ W + S V EW D T
Sbjct: 70 ALVYAAGLLSSLVPAGELWFRFSAR-----------PGASAPVVEWFDDCTHR--AAAAL 116
Query: 114 SRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGI-RYISVPLSNVYMSVNHQNVV 172
S F + + + F + E +G G+ + +VP+ + + + +V
Sbjct: 117 HASNFYLGIHEDFMDMAGFSIASLFCEEGAALRGQRGGLLNFTNVPVGTFVIEEDAEGLV 176
Query: 173 DSVYREFTFTVDQIVSKWGDKVLSSKMKSAL----ARNENERFTIIHAVYPKSLTDKKKD 228
D+V+REF FT Q KWG+ LS M AL A + ++RF IIHAVYP+ D K+
Sbjct: 177 DTVFREFRFTARQCAQKWGEDKLSKPMLDALNSKTASDRDKRFQIIHAVYPR--RDGKQG 234
Query: 229 ---KGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRL 285
+ S +V EE P V R +EIYGR P + +P I+ +
Sbjct: 235 PGIGKKRPIASVYVDKQAIHVIEEGGFYEMPIAVARLLRGNNEIYGRGPGDQVMPEIKLV 294
Query: 286 NETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLP 345
N +L ++PP +A ++ R D +PG + S +
Sbjct: 295 NRMERDLLLSLEQQVNPPWLAPQDSSWRP-DNRPGGVFYWDASNPNNKPERLRDTARLDI 353
Query: 346 YHEELNRLKESIRSLFLLDLFQVLDDKASR----SAAESMEKTREKGAFVGPLIGGLQSE 401
+ LN +E IR + +D+F++L + + +A E + +EK P+ + E
Sbjct: 354 GDKVLNDKREVIRRAWFVDMFKMLSNPDAMKRDKTAFEVAQLMQEKLVLFHPMFARITQE 413
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
+ ++ R +IL G A+ + +++Y S + +A + Q ++ +
Sbjct: 414 KLNPVLERVFNILMRAGIFAPPPMAEGESLE-YEIDYVSKIALAIKAAQNGALAQMMDLI 472
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDI---RQQREVQRRVME 518
G+ T DP+ ++ + +R + P EV ++ + Q ++ +
Sbjct: 473 G--GMATFDPTVALVINWKKAARGVARNSGLPQEWQNSEEEVAEMMQAQAQANQAAQLEQ 530
Query: 519 EQHLQQQLQQTSQDIGAKAAGRA 541
Q +Q +G +A A
Sbjct: 531 MASAANQAAGAAQKLGPQAQQAA 553
>gi|212703247|ref|ZP_03311375.1| hypothetical protein DESPIG_01289 [Desulfovibrio piger ATCC 29098]
gi|212673291|gb|EEB33774.1| hypothetical protein DESPIG_01289 [Desulfovibrio piger ATCC 29098]
Length = 552
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 100/572 (17%), Positives = 202/572 (35%), Gaps = 39/572 (6%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN---------AQLRMWDTTGS 51
M + K+++ +L+ R + E+ + P + + +
Sbjct: 1 MAAPTLKELKQLVAHLEGLRSKRLAQQWEIGKLILPSRGLFQGEETECLRDANLLNPAAQ 60
Query: 52 EACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFR 111
A K ++ ++ ITP W FL + D E+ D V +
Sbjct: 61 RALGKAAAGMTQAITPASSPWFR--------HQFLDRADREVTGGNEYVDVVDARIRAVL 112
Query: 112 ERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNV 171
+ GF + +F ++ FG +A R+ ++++
Sbjct: 113 --AAGGFYSAIHAFNRELLGFGCALLSCDA-----SARTVARFACQTCGTYAVALDEDRT 165
Query: 172 VDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDK-KKDKG 230
+ V R T ++ ++G L + L ++ V + D + D
Sbjct: 166 LSCVVRRLRMTPVEMSRRFGRDRLCEATRQKLESQPYAPIEVVQVVRKREERDPERGDNR 225
Query: 231 NKGFHSKFVSVDEN-RFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETV 289
N F S + E + P+ + A +YG P +AL + +
Sbjct: 226 NMPFASFWYEDQGGTELLRESGFRSMPFFFSTWE-DARGVYGTGPGDDALADQKGIEAWE 284
Query: 290 NELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLP---- 345
A + + PP +A K R+ PG + + +L +P+ N P
Sbjct: 285 KRKAVGIEMMIQPPLLAPGTLK-RHVRAMPGSVISDTAYGQSNAL-RPLYEVNFGPAVGA 342
Query: 346 YHEELNRLKESIRSLFLLDLFQVLD---DKASRSAAESMEKTREKGAFVGPLIGGLQSEF 402
+E+ ++ + + ++F + A + E M++ R +GP + +
Sbjct: 343 VQQEIEQISMRLEDVMKANIFANMSLETRPAGMTMTEYMDRRRRAAELMGPTVSSYEPRV 402
Query: 403 IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVV 462
+ I R +LD +G LP + P + L V Y SP+ + + + S Q ++ V
Sbjct: 403 LTLCIERVYQLLDEEGLLPPPPQGLS-PWATLNVSYQSPMAQMLEQAAAVSIGQFMDQVG 461
Query: 463 ELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHL 522
P+ +D +D D++ PA +IR +V IRQQRE ++ +
Sbjct: 462 PWA--QSQPTILDKLDLDQMVDELAQRLGVPASIIRSDEQVAAIRQQREQAAAAQQQAAM 519
Query: 523 QQQLQQTSQDIGAKAAGRAMEKKLTHDMMENS 554
+ Q+ ++ +G + K+ E++
Sbjct: 520 EVQMMESMAKMGNVKTEGTVAGKVMGSPQEDN 551
>gi|288957023|ref|YP_003447364.1| hypothetical protein AZL_001820 [Azospirillum sp. B510]
gi|288909331|dbj|BAI70820.1| hypothetical protein AZL_001820 [Azospirillum sp. B510]
Length = 534
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 111/503 (22%), Positives = 204/503 (40%), Gaps = 44/503 (8%)
Query: 9 IQDRFNYLKNQRGELNYWMEELTGFLYPYKN----------NAQLRMWDTTGSEACIKLS 58
+ DR+ + +RG ++ P R++D T +A +L+
Sbjct: 23 LLDRYRGARERRGVWESHWQDCYDHALPNGRPFHGGGTAGERRVNRLFDGTAPDAVEQLA 82
Query: 59 SLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGF 118
+ L S +TPP +W G F E R + + + F RS F
Sbjct: 83 ASLLSELTPPWSRWFG----FRPGPDLTGAERDRIAPLLDRAAGIIQAHF-----DRSNF 133
Query: 119 VGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYRE 178
+ + +V GT ME G +R+ +VPL++ + +D+ +R
Sbjct: 134 AVEVHQAFLDLVTVGTASLLMEEAA--PGAVSSLRFTAVPLADAVLEEGPDGRLDATFRR 191
Query: 179 FTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKF 238
T+ QI+ ++ L +++ A + + RF ++ AV P + + G
Sbjct: 192 SEATLAQILQRFPGAGLPDELRRRAAEDPDHRFPLVEAVVPDGAAYRWGVVLDSGLA--- 248
Query: 239 VSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRL 298
+ + + + A P++ R+ E YGRSP M+ALP I+ N+ V + + +
Sbjct: 249 ----DPSWLAQGRFAQSPFVNFRWLKAPGETYGRSPVMKALPDIKTANKVVELVLKNASI 304
Query: 299 SLHPPTIAVSEAKQRN--FDLKPGYMNIGALSREGR-SLFQPVQFGNPLPYHEELNRLKE 355
++ A + L PG + A+ G L P +F L+ L+
Sbjct: 305 AVTGIWQADDDGVLNPSTIRLVPGTIIPKAVGSAGLTPLANPGRFDV---SQLVLDDLRG 361
Query: 356 SIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILD 415
IR L+D + D A +A E +E++ E +G G LQ+E + ++ R + IL
Sbjct: 362 RIRHALLVDRLGPV-DSARMTATEVLERSVEMARLLGATYGRLQAELMTPLLLRAVSILR 420
Query: 416 SQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMD 475
+G +P+ L+++++ SPL + Q V + L+ +++V LG P
Sbjct: 421 RRGEIPDIT----VDGRLVELQHRSPLAQAQAQRDVQATLRWLDSVKALG-----PEAEA 471
Query: 476 HMDTDRVSRFSLWATNTPAVLIR 498
+D + + A PA L+R
Sbjct: 472 VVDAAATAHWLGEAFGVPAKLMR 494
>gi|303327895|ref|ZP_07358334.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
gi|302861721|gb|EFL84656.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
Length = 554
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 99/566 (17%), Positives = 204/566 (36%), Gaps = 40/566 (7%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNN---------AQLRMWDTTGSEACIKL 57
K+++ +L++ R + EL + P + + +++ + A K
Sbjct: 9 KEVKQLVGHLESLRAKRLAQQRELGRLILPSRGLFQGEDTESLRESNLFNPAANRALRKA 68
Query: 58 SSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSG 117
++ ++ ITP G W AFL + D + E+ D V + L S G
Sbjct: 69 AAGMTQAITPAGNPWFK--------HAFLLRRDREATGGNEYVDTVDNMLRTVL--SAGG 118
Query: 118 FVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYR 177
F + SF ++ FG E RY +++ +D+V R
Sbjct: 119 FYRAIHSFNKELLGFGCALLGCEESP-----RTVARYFCQTCGTYCAALDEDGNLDAVAR 173
Query: 178 EFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDK-KKDKGNKGFHS 236
T ++ ++G+ LS + L ++ + + H V ++ D + D+ N + S
Sbjct: 174 RLLMTPRELARRFGEDRLSDVSRQKLKKDSYDPVAVRHVVQRRTARDPERADRSNMPWGS 233
Query: 237 KFVSVDE-NRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQF 295
+ F + + P+ + A +YG P EAL + + A
Sbjct: 234 WWYEEGGAADFLDVGGFRSMPFFFTVWE-EARGVYGTGPGDEALADQKGIEGWELRKAVG 292
Query: 296 GRLSLHPPTIAVSEAKQRNFDLKPGYMNI-GALSREGRSLFQPVQFGNPLP-YHEELNRL 353
+ P + + D PG + G + V FG + EE++++
Sbjct: 293 VEKMID-PVLVSQGPLKAYVDTSPGAVIPSGGFGADSLKPLYEVNFGPAVQHVQEEISQI 351
Query: 354 KESIRSLFLLDLFQVLD---DKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRE 410
+ + + ++F + A + E M++ R +GP + G + + ++
Sbjct: 352 SLRLEDVMMANIFASMSLETRPAGMTMTEYMDRRRRSAELMGPTVSGYEPRILSPVLENT 411
Query: 411 LDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGD 470
+L+ G LP +P S L V Y SP+ + + + +
Sbjct: 412 FGLLEEYGLLPGPPDGLSPFAS-LNVSYQSPMAQMLEQSGAVAIQSLFELAAPM--LRAV 468
Query: 471 PSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTS 530
P D +D ++ PA ++R V +RQQR + ++Q + ++ Q
Sbjct: 469 PDLADKIDFEQAIDELAQRLGVPASVVRSDETVAAMRQQRAEAQAAQQQQMAEARMLQQV 528
Query: 531 QDIGAKAAGRAMEKKLTHDMMENSYG 556
+G + + +++ + G
Sbjct: 529 AALGNVKT----QGTVAGEVLGTTQG 550
>gi|187736539|ref|YP_001878651.1| hypothetical protein Amuc_2060 [Akkermansia muciniphila ATCC
BAA-835]
gi|187426591|gb|ACD05870.1| hypothetical protein Amuc_2060 [Akkermansia muciniphila ATCC
BAA-835]
Length = 544
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 129/544 (23%), Positives = 224/544 (41%), Gaps = 56/544 (10%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYK-----------NNAQLRMWDTT 49
M +R+A ++ + L QR W + L ++ P + +A RM DTT
Sbjct: 1 MEERTA-ELNSVYKSLAAQRAPWETWWDRLRDYVLPRRLNREGEVSLPNRDAMDRMTDTT 59
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
EAC KL+S S ITP W + +D + W +Q ++
Sbjct: 60 AVEACQKLASGHMSYITPSHDVWFKWSAP----------DDRGGDEAEAWYNQCSEI--A 107
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+E S S F + + V GTG + D + L + ++P + N +
Sbjct: 108 LKELSVSNFYTEIHECFLDRVALGTGSLFTGTSSDGRLL-----FTNIPCGQFACAENAE 162
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFT---IIHAVYPKSLTDKK 226
VD+ REFT+T Q S +G K L K + L R N T +H V P++ ++
Sbjct: 163 GRVDTYVREFTYTAHQARSMFGVKALGPKAREVLERGGNPYATTLRFLHVVRPRTRRSRR 222
Query: 227 KD-KGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRL 285
++ + F S ++S+D+ EE FPY+V R+ YG +P P I+++
Sbjct: 223 REQASHMPFESVYLSLDDQVIVEEGGYMEFPYLVTRFLKWGSGPYGLAPGRLVFPAIQQV 282
Query: 286 NETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLP 345
L G ++ P I + DL+ G + ++ E SL P ++
Sbjct: 283 QFLNRILDTLGEVAAF-PRILELANQIGEVDLRAGGRTV--ITPEAASLHLPREWATQGK 339
Query: 346 YHEELNRL---KESIRSLFLLDLFQVLDD-KASRSAAESMEKTREKGAFVGPLIGGLQSE 401
Y ++RL +++IR + L + ++ + + +A E M + E+ P S+
Sbjct: 340 YDVGMDRLAQKQDAIRRAYYLPMLELWSGHRGNMTATEVMARENERVLMFSPSFTLFVSD 399
Query: 402 FIGAMISRELDILDSQGNLPECEGAD-------NPPVSLLKVEYTSPLF---KYQQAESV 451
M +R +L G P A + V +V Y S + + Q+E +
Sbjct: 400 LYSTM-TRIFSLLFRMGKFPRPPRAVLRVGRDGSVAVGEPRVVYQSKIALVLRRLQSEGM 458
Query: 452 ASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQRE 511
+LQ +N +++ P DH+D D R S P ++R A+V +R++RE
Sbjct: 459 DRSLQRLNMMMQAA-----PDLADHVDWDHCFRLSARVDGAPESMLRPWADVRAMRKERE 513
Query: 512 VQRR 515
++
Sbjct: 514 DLQQ 517
>gi|291334466|gb|ADD94120.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1161]
Length = 330
Score = 358 bits (920), Expect = 1e-96, Method: Composition-based stats.
Identities = 84/336 (25%), Positives = 158/336 (47%), Gaps = 29/336 (8%)
Query: 1 MNQRS-AKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-------KNNAQLR---MWDTT 49
M Q AK++ R++ LK+QR +E+ ++ P ++ R ++D +
Sbjct: 1 MAQTDKAKNLLKRYDRLKSQRQNWESHWQEVADYMQPRKADVTKTRSKGDKRTELIFDGS 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
++ L++ L ++T P W L F ++ + + W + TD ++
Sbjct: 61 PLQSVELLAASLHGMLTNPSTPWFTLR--------FKDEDIDNEDEAKLWLEASTDAMYT 112
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+RS F + Y ++ FGT ++E D E+ I++ + ++ V+++ N +
Sbjct: 113 AF--NRSNFQQEIFELYHDLITFGTAAMFIEEDD-----EDIIKFSTRHINEVFIAENDK 165
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKK-D 228
+D+V+R+F+ + ++ K+GD +S + + ++ E I+HAVYP+S D +K D
Sbjct: 166 GRIDTVFRKFSLSARAVMQKFGD--VSINIATKAKKDPYEEVEIMHAVYPRSDFDPRKQD 223
Query: 229 KGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNET 288
K N F S ++ + FP++V RY + EIYGRSPAM ALP ++ LNE
Sbjct: 224 KENMPFESVYLDAESGDELSVSGFREFPFVVPRYLKASHEIYGRSPAMTALPDVKMLNEM 283
Query: 289 VNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNI 324
+ + + PP + + PG +N
Sbjct: 284 SKTTIKSAQKQVDPPLLVPDDGFMLPVRTIPGGLNF 319
>gi|209966578|ref|YP_002299493.1| hypothetical protein RC1_3320 [Rhodospirillum centenum SW]
gi|209960044|gb|ACJ00681.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 521
Score = 347 bits (890), Expect = 3e-93, Method: Composition-based stats.
Identities = 115/488 (23%), Positives = 198/488 (40%), Gaps = 44/488 (9%)
Query: 23 LNYWMEELTGFLYP------YKNNAQLR----MWDTTGSEACIKLSSLLSSLITPPGQKW 72
++ + P R ++D T ++A +L++ L + +TPP +W
Sbjct: 39 WEPLWQDCYDHVLPQNARFTRDAGPGERRGELLFDGTAADAADQLAASLLAQLTPPWSRW 98
Query: 73 HGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEF 132
GLA A V ++ + L RS F + VV
Sbjct: 99 AGLAPG-------PDLSAAERALVAPLLERASADLQA--HLDRSNFAVEAHQAFLDVVTG 149
Query: 133 GTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGD 192
GTGC +E G +R+ +VPL+++ + + +D+V+R T T+ Q+ +++G
Sbjct: 150 GTGCLLVEEAP--PGAPSALRFTAVPLADLVLEEGAEGRLDTVFRRLTPTLAQLAARFGT 207
Query: 193 KVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQI 252
L ++ A + + R ++ AV P G + + D E +
Sbjct: 208 DALPGALRRRAAADPDARAAVVEAVLPDP-------GGGACRWAVALEDDPPVLLAEGRF 260
Query: 253 ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQ 312
A P+I R+ E+YGRSP M+ALP IR N+ V + + +++ A +
Sbjct: 261 AEPPFIAFRWMKAPGEVYGRSPVMKALPDIRTANKVVELVLKNASVAVTGIWQADDDGVL 320
Query: 313 RN--FDLKPGYMNIGALSREGR-SLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVL 369
L PG + A+ G L P +F L+ L+ IR L D +
Sbjct: 321 NPGTIRLVPGAIIPKAVGSAGLTPLASPGRFDV---SQLVLDDLRAHIRHALLADRLGPV 377
Query: 370 DDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNP 429
+A E +E++ E +G G LQSE + ++ R L +L +G +P+
Sbjct: 378 QG-PRMTATEVLERSAEMARMLGATYGRLQSELLVPLVRRCLSLLRRRGAVPDLAA---- 432
Query: 430 PVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWA 489
L+ V+ SPL + QQ + L+ + +V LG M +D + +RF A
Sbjct: 433 DGRLVAVQILSPLARAQQRRDAEAVLRWLESVTGLGDA-----AMRAVDLEACARFLADA 487
Query: 490 TNTPAVLI 497
PA L+
Sbjct: 488 AGVPAALL 495
>gi|118590948|ref|ZP_01548348.1| hypothetical protein SIAM614_19846 [Stappia aggregata IAM 12614]
gi|118436470|gb|EAV43111.1| hypothetical protein SIAM614_19846 [Stappia aggregata IAM 12614]
Length = 567
Score = 340 bits (873), Expect = 3e-91, Method: Composition-based stats.
Identities = 119/534 (22%), Positives = 211/534 (39%), Gaps = 47/534 (8%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYP------------------------YKNNA 41
D++ + +R + ++ + P +
Sbjct: 4 VDDLKTELQSARAERQWVEADWQDYVTYTAPDMERAFNRPGGVSARDGMSALRGSAARDR 63
Query: 42 QLRMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCD 101
+++D T +L+S + SL P G WHG+ A S+ E+ +
Sbjct: 64 SRKLYDPTAVWLLDRLASGIGSLTMPEGFPWHGVGFGDPFAP-------APSQADEEFFE 116
Query: 102 QVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFY-MEADVDEKGLEEGIRYISVPLS 160
V D LF R RSGF +S S V+ GTG + +E + + + Y VPL
Sbjct: 117 LVRDHLFRVRYSGRSGFALANRSRLLSTVKLGTGVLFPVENEDSLADIRTPVHYRYVPLY 176
Query: 161 NVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKS--ALARNENERFTIIHAVY 218
+Y+ ++ Q +R T Q V ++ K +S K+K A A+ +N +T +HA +
Sbjct: 177 EIYLVIDAQGNDCGFFRVRTLKAWQAVKEYAGK-VSPKVKEDAADAKRKNTDYTFVHACF 235
Query: 219 PKSLTDKKK-DKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAME 277
+ + D F S D +P ++ R+ YG P +
Sbjct: 236 LREGGHAQATDTRKSRFESIHFEEDSGHICRRGGFFEYPLVISRWDRDGLSPYGSPPQAK 295
Query: 278 ALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQP 337
+ I+ L + ++ PP + A++R DL PG +N G + +GR LF+P
Sbjct: 296 LMSDIKSLQSLARDGLIASSQAVRPPI--ATHAQERQLDLNPGRINPGLIDEQGRPLFRP 353
Query: 338 V-QFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIG 396
+ NP ++ ++E +R DL+Q L + R+A E+ + +E +GP
Sbjct: 354 MIDTVNPGAADAQIETIREKLRVGLYGDLWQTLLEGNGRTATEANIRRKEMADMIGPFST 413
Query: 397 GLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEY----TSPLFKYQQAESVA 452
+ + A+ RE+ IL +G PP S+L+ + T+P+ + ++A
Sbjct: 414 NIMAGN-EALFEREIGILGRRGAFAPGS-PLAPPQSVLEGDVTLTPTAPIDQMREAGHFE 471
Query: 453 SALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDI 506
+ + + DPS +D D + + A PA L R EVE +
Sbjct: 472 AIMGFQEYLG--IAAGADPSILDLHDREAEYDLTRRALGLPAKLRRRPEEVEAL 523
>gi|325971684|ref|YP_004247875.1| hypothetical protein SpiBuddy_1857 [Spirochaeta sp. Buddy]
gi|324026922|gb|ADY13681.1| hypothetical protein SpiBuddy_1857 [Spirochaeta sp. Buddy]
Length = 571
Score = 336 bits (861), Expect = 6e-90, Method: Composition-based stats.
Identities = 101/522 (19%), Positives = 198/522 (37%), Gaps = 30/522 (5%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQL--------RMWDTTGSEACIKL 57
AK I +++ LK R + E F+ N ++++T+G A
Sbjct: 31 AKAIAAKWSRLKTLRQKTEALRWEACAFVQHRMNEFSDSNNPIKPVKLYNTSGILALDTF 90
Query: 58 SSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSG 117
+ + P +W L + + ++ ++ + +F E +++
Sbjct: 91 INGYHGNLITPSMRWFKLTLTGENF-----EDSDTIHGANDYMEISETQMFA--ELNKTN 143
Query: 118 FVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYR 177
F + V GT ++ DV+ + ++ + ++ N +D+++
Sbjct: 144 FYPLDKLATKDAVVQGTSAEWVYDDVESGT----CVFETIAPWDFWIDKNANGKIDTIFI 199
Query: 178 EFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDK----GNKG 233
FT T + ++ DK + ++ + + A+YP+ +K K K
Sbjct: 200 RFTMTSADALDRFKDKTPPNILRDVETDAGHNEHEFVLAIYPRKKLRSEKGKVLISTEKP 259
Query: 234 FHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELA 293
F + E+ EE FP V + YG M+ L ++RLN +
Sbjct: 260 FAAVTYYPVEDCIVEESGYDDFPVAVHVFEQDGTSAYGMGLVMKYLTELKRLNSMSRDHL 319
Query: 294 QFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRL 353
+ + PP K R F PG N + Q VQ L +E+ L
Sbjct: 320 ETVQKVAKPPMSIPESLKGR-FSGDPGARNYMGNMDAKPEIIQTVQDIGWL--SQEITEL 376
Query: 354 KESIRSLFLLDLF--QVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISREL 411
+E I LF DLF + DK +A ++ E+ A + ++G Q I ++ R
Sbjct: 377 EEKIGRLFFNDLFNYLMRQDK-VLTATQTQAIKSEELALLASILGTTQYMKINPIVKRVF 435
Query: 412 DILDSQGNLP-ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGD 470
I+ LP + +L++++ PL K + ++ LQ ++
Sbjct: 436 RIMVKGNRLPKPPKELLRIKNALMRIDLDGPLAKNVKMFAMQDGLQASLEWMQALHAMQM 495
Query: 471 PSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREV 512
+ +D+++TD R + A P ++R+ EVE +R+Q++
Sbjct: 496 TNTLDNINTDIFVRKAFIAAGMPQSVLRELGEVEQMRKQKQA 537
>gi|296537022|ref|ZP_06899017.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296262651|gb|EFH09281.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 368
Score = 286 bits (731), Expect = 8e-75, Method: Composition-based stats.
Identities = 81/354 (22%), Positives = 135/354 (38%), Gaps = 21/354 (5%)
Query: 112 ERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNV 171
RS F + + +V GTG +E G +R+ +VPL +
Sbjct: 33 HLDRSNFAVEMHQAFLDLVVAGTGVLLVEEAP--PGALSALRFTAVPLREAVLEEGESGR 90
Query: 172 VDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGN 231
+D++YR I +++ VL + + E R ++ AV+P ++G
Sbjct: 91 LDTIYRAMALEAAAIAARYPGAVLPPGLGAGSPAQEAPRHRVVEAVWP--------ERGG 142
Query: 232 KGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNE 291
+ + E + P+I R+ E YGR P M+ALP IR N+ V
Sbjct: 143 SAYLAVLEHDGRAWPLAEGRFQDSPFIAFRWLKAPGEAYGRGPVMKALPDIRTANKVVEL 202
Query: 292 LAQFGRLSLHPPTIAVSEAKQRN--FDLKPGYMNIGALSREGR-SLFQPVQFGNPLPYHE 348
+ + ++ A + L PG + A G L P F
Sbjct: 203 VLKNASIAATGIWQAEDDGVLNPATVRLVPGAIIPKAPGSSGLTPLAAPGNFDV---SQL 259
Query: 349 ELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIS 408
L+ L+ IR+ L D A+ +A E +E++ + +G G LQ+E + +I
Sbjct: 260 VLDDLRGRIRAALLADRLGP-PGTAAMTATEVLERSAQTARLLGATYGRLQAELLTPLIG 318
Query: 409 RELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVV 462
R L IL +G +P ++ Y SPL + Q A+ L + V
Sbjct: 319 RCLSILRRRGEVPPL----LLDGREARLTYHSPLARVQGRSDAANTLLFLQAVA 368
>gi|13186164|emb|CAC33475.1| hypothetical protein [Legionella pneumophila]
Length = 519
Score = 250 bits (639), Expect = 4e-64, Method: Composition-based stats.
Identities = 89/461 (19%), Positives = 179/461 (38%), Gaps = 40/461 (8%)
Query: 30 LTGFLYPYKNNAQLRMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKE 89
L GFL P + ++D T A +L+ + + P GQ+W F+ F
Sbjct: 70 LAGFLTPGQQY-NADIYDLTLPIAHKRLADKMLMNMVPQGQQW----VKFTPGDEFGEPG 124
Query: 90 DARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLE 149
++ + ++TD F RS F + V TG ++E +
Sbjct: 125 TPLYQRALDATQRMTDHFFKI--IDRSNFYLAVGESLQD-VLISTGII----AINEGNRK 177
Query: 150 EGIRYISVPLSNVYMSVNHQNVVDSVYRE-FTFTVDQIVSKWGDKVLSSKMKSALARNEN 208
+RY +VP + V + + VD+++R+ + ++ I S W + + L +
Sbjct: 178 RPVRYEAVPPAQVMFQGDAEGQVDAIFRDWYQVRIENIKSMWPKAEV-----AKLNKKPE 232
Query: 209 ERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADE 268
++ I + +K+ + V E+ +++P++V R R E
Sbjct: 233 DKVDIWECAWIDYEAPEKER------YQYVVMTSSKDVLLEQSNSSWPWVVYRMRRLTGE 286
Query: 269 IYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSE--AKQRNFDLKPGYMNIGA 326
I GR P++ A PT +N+ + + +P +A S+ Q+ F +PG + +
Sbjct: 287 IRGRGPSLSAYPTAATINQALEDELVAAAFQANPMYMAASDSAFNQQTFTPRPGSI-VPV 345
Query: 327 LSREGRSLFQPVQFGNPLPYHEEL-NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTR 385
+G +P + + ++ L N ++ I L + +R+A E+ +
Sbjct: 346 QMVQGEWPIKPFEQSGNIQFNALLVNDFRQQINELLYA-FPLGAVNSPTRTATEAEIRYT 404
Query: 386 EKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPE--CEGADNPPVSLLKVE------ 437
E ++ LQ+EF +I R L +++ LPE D+ ++ V+
Sbjct: 405 ENLESFSAMVPRLQNEFFIPVIQRTLWVINK--VLPETFANIPDDIRNKMISVDGQILGL 462
Query: 438 -YTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHM 477
+ +PL + A+ L L + + +D +
Sbjct: 463 SFDTPLMTAKGQVKTAALLGFYQAAASLLGQEAATASLDPV 503
>gi|307946242|ref|ZP_07661577.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307769906|gb|EFO29132.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 519
Score = 239 bits (609), Expect = 1e-60, Method: Composition-based stats.
Identities = 84/506 (16%), Positives = 171/506 (33%), Gaps = 39/506 (7%)
Query: 9 IQDRFNYLKNQRGELNYWMEELTGFLYPYK------NNAQLRM---WDTTGSEACIKLSS 59
++ R N + +R ++E + P++ R+ +D T ++ + +
Sbjct: 7 LKKRRNGAQRERDAFQPLLDEAYQYAIPFRKSAAKTGKGDKRVNDVFDHTAIDSAFRFAG 66
Query: 60 LLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFV 119
+ + P GQ L ++ K+ + ++ + F + F
Sbjct: 67 KVQQDLWPAGQDNFELEPGPVVL------DENERDKMSKQLAPISKIVQAFFDD--GDFD 118
Query: 120 GCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREF 179
+ G G + E+ ISVP+ + + N + +++ +
Sbjct: 119 MAFHEMALDL-SAGNGAMLLNP-PGPDEPEKLWEPISVPIEELLIENGPNNRISAIFWKR 176
Query: 180 TFTVDQIVSKWGDKVLSSKMKSALARNENERFTI-IHAVY-PKSLTDKKKDKGNKGFHSK 237
+V + W + +K L + + V+ PK + NK +
Sbjct: 177 KMSVRVLQDTWPEGKFGENLKKLLKEKPEGEIDVNVDTVWVPKERRWRMIVWCNKQETAV 236
Query: 238 FVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGR 297
F + T P++ RY E YGR P M A+PTI+ LN Q
Sbjct: 237 FQNES----------RTCPWLFARYFRVPGEAYGRGPVMLAMPTIKTLNTAARLQLQAAA 286
Query: 298 LSLHPPTIAVSEAKQRNF--DLKPGY-MNIGALSREGRSLFQPVQFGNPLPYHEELNRLK 354
+++ V + L+PG + + LN ++
Sbjct: 287 IAMLGIYTTVDDGVFNPDLASLEPGAFWKVARNGGALGPSINRFPDPRLDLSNLVLNDMR 346
Query: 355 ESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDIL 414
+++ + D D A RSA E +E+ + + G L E + + R ++I
Sbjct: 347 MGVKATMM-DQSLPADGAAVRSATEILERVKRLASDHLGAYGRLVKEIVIPAVKRAMEIA 405
Query: 415 DSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCM 474
++G + L++V SPL ++A+ V +Q + V+ +G G P +
Sbjct: 406 YNKGLI---SDEIPIDQLLVRVRVKSPLALAREAQRVEKVIQWLQMVISIGAAVGQPGFL 462
Query: 475 DHM-DTDRVSRFSLWATNTPAVLIRD 499
+ + P + I
Sbjct: 463 QQIAKVETALTQIGRDLGVPEMFIVS 488
>gi|291334523|gb|ADD94176.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1201]
gi|291334657|gb|ADD94304.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C695]
gi|291334711|gb|ADD94357.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C890]
gi|291336437|gb|ADD95992.1| hypothetical protein [uncultured organism MedDCM-OCT-S04-C1073]
Length = 193
Score = 225 bits (573), Expect = 2e-56, Method: Composition-based stats.
Identities = 52/189 (27%), Positives = 97/189 (51%), Gaps = 8/189 (4%)
Query: 137 FYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLS 196
++E D E+ +++ + ++ ++++ N + +D+V+R+F+ + ++ K+GD +S
Sbjct: 1 MFIEEDD-----EDILKFSTRHINEIFIAENDKGRIDTVFRKFSLSARAVMQKFGD--VS 53
Query: 197 SKMKSALARNENERFTIIHAVYPKSLTDKKK-DKGNKGFHSKFVSVDENRFFEEKQIATF 255
+ + ++ E I+HAVYP+S D +K DK N F S ++ + F
Sbjct: 54 INIATKAKKDPYEEVEIMHAVYPRSDFDPRKQDKENMPFESVYLDAESGDELSVSGFREF 113
Query: 256 PYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNF 315
P++V RY + EIYGRSPAM ALP ++ LNE + + + PP + +
Sbjct: 114 PFVVPRYLKASHEIYGRSPAMTALPDVKMLNEMSKTTIKSAQKQVDPPLLVPDDGFMLPV 173
Query: 316 DLKPGYMNI 324
PG +N
Sbjct: 174 RTIPGGLNF 182
>gi|253583086|ref|ZP_04860294.1| predicted protein [Fusobacterium varium ATCC 27725]
gi|251834978|gb|EES63531.1| predicted protein [Fusobacterium varium ATCC 27725]
Length = 517
Score = 213 bits (543), Expect = 5e-53, Method: Composition-based stats.
Identities = 97/523 (18%), Positives = 191/523 (36%), Gaps = 48/523 (9%)
Query: 20 RGELNYWMEELTGFLYPYKNNAQLRM--------WDTTGSEACIKLSSLLSSLITPPGQK 71
+ ++ E+ + P + ++ +++ S+A + +S + +K
Sbjct: 23 KSKIEPLYNEILAYTDPMNSVTTSKLEGTLEGTYVNSSISDAQTSFKNFISYALFGIKKK 82
Query: 72 WHG--LAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSV 129
W + + A + + + +E D TD +F S + + T
Sbjct: 83 WAKSDVIKPLLAKKYQGQELIDMIQSYKEKLDVQTDEIFD--YILASNYEKEIGRALTDW 140
Query: 130 VEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYR-EFTFTVDQIVS 188
E GTGC+ E EK R+ VPL+ + + + Q+ + V+R F +++ I S
Sbjct: 141 GELGTGCWKYEEQNSEKV---PFRHQYVPLNELLFNEDLQHRPNIVFRYNFKYSLWDIRS 197
Query: 189 KWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDENRFFE 248
+ LS NENE T+I V P + TD F +
Sbjct: 198 LYKKADLSC----YDGINENEEVTVIECVMPVAETDT--------FEWILFDERMDNVLY 245
Query: 249 EKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVS 308
K PY + R+ V + ++GR + L RL N A+ + PP + V
Sbjct: 246 RKIYNYNPYTIFRFTVMPNNVWGRGLGVTCLDYYERLCYCENLRARQSIRIVEPPLLLVG 305
Query: 309 EAKQRN-FDLKPGYMNIGALSREGRSLFQPVQ-FGNPLPYHEELNRLKESIRSLFLLDLF 366
+ + + FDL P +N G G++ P+ G LP +++ R + I+++ +
Sbjct: 306 DKRLIDGFDLDPNGLNWGGDGITGQANAVPMNTTGTLLPLDQDIQRYTQVIQAIHFNNPM 365
Query: 367 QVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGA 426
++++ +R AE + + L E + ++ IL + + + +
Sbjct: 366 GSVENRTTRGNAEMGYRMQLFNQKFSDATSNLYDEVLIPTFAKPKQILQDKNIVKKIDE- 424
Query: 427 DNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSC-MDHMDTDRVSRF 485
+ ++ + L + E + + TV + P ++ D F
Sbjct: 425 ----DKYFQAKFVNLLTETVDMEEIQKLSTYIQTV-----QGFYPEVRTATLNKDNTLNF 475
Query: 486 SLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQ 528
P L ++QR+ +M +Q LQ Q
Sbjct: 476 IADTFTVPVYL-------RATKEQRQESEEMMMKQALQMQAVA 511
>gi|256845624|ref|ZP_05551082.1| predicted protein [Fusobacterium sp. 3_1_36A2]
gi|256719183|gb|EEU32738.1| predicted protein [Fusobacterium sp. 3_1_36A2]
Length = 550
Score = 173 bits (439), Expect = 6e-41, Method: Composition-based stats.
Identities = 85/548 (15%), Positives = 203/548 (37%), Gaps = 36/548 (6%)
Query: 5 SAKDIQDRFNYLKNQRGELNYWMEELTGFL---YPYKNNA-----QLRMWDTTGSEACIK 56
+ + ++ F+ KN + ++ E+ + + K++ R ++ ++
Sbjct: 6 TREKLEYYFDNAKNYKEDIRGLYNEVYEYTDVNFSIKDSGTVEKQSKRGVESVILKSQNF 65
Query: 57 LSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSK----KVREWCDQVTDTLFGFRE 112
L + + S I +W + + A++ + ++ ++ + + +DT++
Sbjct: 66 LCNFIMSSIFSKSGRWATVKVNQEAFKKLSGVDGEAAEGLSNEINKVLENNSDTVY--FT 123
Query: 113 RSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV 172
+ + ++ GTG + D Y L N+Y+ ++
Sbjct: 124 NDNTNYYTETSKALLDCIKVGTGIRKIIELKDNTKC---FTYAYQNLDNIYILEDNLGKP 180
Query: 173 DSVYREF-TFTVDQIVSKWGDKVLSSKMKSALARNE-NERFTIIHAVYPKSLTDKKKDKG 230
+ +++ + ++ I +G L L ++ E+ II V D K
Sbjct: 181 NIIFKVYVEKNLNDINDLFG--HLPITTPKGLNEDKLEEKINIIECVVGVFDEDTSTYKY 238
Query: 231 NKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVN 290
G ++ E ++ PY V R+++ + +G +E L + L +
Sbjct: 239 YHGLFTEAFEE----MLYEGELNYNPYTVFRWKINSSNPWGIGIGLENLDLFKELKDLKE 294
Query: 291 ELAQFGRLSLHPPTI--AVSEAKQRNFDLKPGYMNIGALSREGRS-LFQPVQFG-NPLPY 346
+ + + PP ++ + LK N G G +P+ G N LP
Sbjct: 295 KRKKHADKIVSPPLNFYGSTDLINK-VSLKANAKNYGGSGIGGDKYGVEPINIGTNLLPV 353
Query: 347 HEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAM 406
+++ ++K+ IR +F+ + D +RSA E + + +E +
Sbjct: 354 EKDIEQVKQEIREVFMSQPLGDVSDTKNRSATEMSLRHEMFRKEFSGTYELINTELLEPT 413
Query: 407 ISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
I+D +G L E +S +++Y + L + ++ V + + T+ ++
Sbjct: 414 FMNAYYIMDGKGLLNTTEDESYINIS--QIQYINELTRNAGSDEVINTINFYMTLSQVVP 471
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQL 526
+T D + ++ P ++ E++ + Q++ + ME+ L Q+
Sbjct: 472 ETQRQFI---FKIDELIDWASKKMRVPLDVLNSKEEIKQLIAQQQELEQ-MEKMALIQEG 527
Query: 527 QQTSQDIG 534
QD+G
Sbjct: 528 IGKRQDVG 535
>gi|291335391|gb|ADD95005.1| head tail connector protein [uncultured phage MedDCM-OCT-S04-C24]
Length = 526
Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats.
Identities = 73/502 (14%), Positives = 160/502 (31%), Gaps = 59/502 (11%)
Query: 10 QDRFNYLKNQRGELNYWMEELTGFLYPY-------KNNAQLRM---WDTTGSEACIKLSS 59
+ R++ L + R + + + PY L++ W +TG++ + L+S
Sbjct: 4 KQRYDRLSSSRSQFLNAARQASELTIPYLIREDEHTTKGALKLTTPWQSTGAKGVVTLAS 63
Query: 60 LLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFV 119
L + PP + L + L E ++ ++ T+ + SG
Sbjct: 64 KLMLALLPPQTSFFKLQVNDVNLPDELGPEIRS--ELDLSFAKIERTV--MESIAESGDR 119
Query: 120 GCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREF 179
+ +V G +M D + PL+ + + V + +
Sbjct: 120 VVVHQALKHLVVAGNALIFMSKDGLKL----------YPLNRYVVDRDGNGNVIEIVTKE 169
Query: 180 TFTVDQIVSKWGD--KVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSK 237
T + I + + + +E H K N+
Sbjct: 170 TISKKLIKKFYPEYEDKAQDSVVDDGHIPNDECVIYTHV----------KLDNNRW---V 216
Query: 238 FVSVDENRFFEEK----QIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELA 293
+ E + + P++V R+ E+YGR E L ++ L +
Sbjct: 217 WHQELEGKILPKSMGKAPFDANPWLVLRFNHVDGEVYGRGRVEEFLGDLKSLEALSQAIV 276
Query: 294 QFGRLSLHPPTIAVSEAKQRNFDL---KPGYMNIGALSREGRSLFQPVQFGNPLPYHEEL 350
+ + + + L G + G G + Q + + ++ +
Sbjct: 277 EGSAAAAKVVFTVSPSSTTKPQTLAKAGNGAIIQGRPEDIG--VVQVGKTADFSTAYQMI 334
Query: 351 NRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRE 410
L + + F L + D +A E E +G L L EF+ ++R+
Sbjct: 335 GSLTQRLNEAF---LILNVRDSERTTAEEVRMTQLELEQQLGGLFSLLTVEFLVPYLNRK 391
Query: 411 LDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGD 470
L++ G++P +++ + L + Q ES+A Q + + +
Sbjct: 392 LNVAQKTGDIPRLPQGGIVRPTIVAG--INALGRGQDRESLA---QFLTVIAQTMGPDA- 445
Query: 471 PSCMDHMDTDRVSRFSLWATNT 492
+++ D V + ++
Sbjct: 446 --IAQYINPDEVIKRLAASSGI 465
>gi|259419010|ref|ZP_05742927.1| hypothetical protein SCH4B_4395 [Silicibacter sp. TrichCH4B]
gi|259345232|gb|EEW57086.1| hypothetical protein SCH4B_4395 [Silicibacter sp. TrichCH4B]
Length = 506
Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats.
Identities = 81/520 (15%), Positives = 166/520 (31%), Gaps = 55/520 (10%)
Query: 8 DIQDRFNYLKNQRGEL-NYWMEELTGFLYPYKNNAQL----------RMWDTTGSEACIK 56
+ RF+ K+ R + E+ F + + ++ T E +
Sbjct: 4 EFDRRFSVAKSHRKQHVEEDGREVYKFCFNGREREWDNNSSYKDEPEEIFVETPGEVAEE 63
Query: 57 LSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRS 116
S L S +TP W + + +++ + + + S
Sbjct: 64 FSGDLFSTMTPENSPWSEFEAGNAVDEDDEAAAKEELEELEKAISKSLRS---------S 114
Query: 117 GFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVY 176
+ + + V G ++ D L I + +VP+ +Y++ + D +
Sbjct: 115 NYYDEGPTAFQDAVV-GNVAMWV----DRPTLNGAINFEAVPIPQLYVTPGPLGIEDR-F 168
Query: 177 REFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVY--------PKSLTDKKKD 228
R F + + D ++ + ++ N ++H + P + + D
Sbjct: 169 RRQRFHYRNLKVLFPDAKFPRAIEDKIKKSSNALAVVVHGFWRTFEDVENPVWRHEIRVD 228
Query: 229 KGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNET 288
G S+ +VGR+ A +GR P + LP R+ +E
Sbjct: 229 GKPIGLDKDVGSIGAVNL-----------VVGRFNPYAGSAWGRGPGRKLLPVFRQYDEL 277
Query: 289 VNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHE 348
V + +L PP + + + + QPV FG
Sbjct: 278 VRMNMEGLDRTLDPPFTYPHDGMLDLSQGLENGVGYPTMPGT-KDALQPVLFGTLDYGFF 336
Query: 349 ELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIS 408
+L++ IR F + + K SA++ + + ++ + EF ++S
Sbjct: 337 SEEKLEQKIRDGFYRE--KEQAGKTPPSASQYIGQENKQVRRMARPATKTWREFGVGLLS 394
Query: 409 RELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKT 468
R + G E ++ SPL + Q + V +A + + E
Sbjct: 395 RVEWLERQPGGSLEGAELPLIDSGVVNARPISPLERAQAMQDVTTADMIIGMINERLGPE 454
Query: 469 GDPSCMDHMDTDRVSRFSLWATNTPAVLI--RDTAEVEDI 506
+ DT R + L ++ R AE+E +
Sbjct: 455 QAAMLIKGTDTYRKIKEVLK-----DQIVEFRSEAEIEAL 489
>gi|194100448|ref|YP_002003821.1| gp8 [Klebsiella phage K11]
gi|193201387|gb|ACF15865.1| gp8 [Klebsiella phage K11]
Length = 535
Score = 123 bits (310), Expect = 6e-26, Method: Composition-based stats.
Identities = 84/549 (15%), Positives = 163/549 (29%), Gaps = 51/549 (9%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----KNNAQLRM---WDTTGSE 52
+ + + + ++ LKN R E + P +NA W + G+
Sbjct: 6 LEGFAEEGAKAVYDRLKNDRQPYETRAESCAQYTIPSLFPKDSDNASTDYTTPWQSVGAR 65
Query: 53 ACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRE 112
L+S L + P Q W L S + L + +K V E V + + E
Sbjct: 66 GLNNLASKLMLALF-PMQSWMKLTISEYEAKNLLGDAEGLAK-VDEGLSMVERIIMNYIE 123
Query: 113 RSRSGFVGC-LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNV 171
S L + G Y+ + + + R L++ + +
Sbjct: 124 ---SNSYRVTLFECLKQLCVAGNALLYL-PEPEGYTPMKLYR-----LNSYVVQRDAFGN 174
Query: 172 VDSVYREFTFTVDQIV-SKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKG 230
V + T+D+I + + V S + + E+ + VY D
Sbjct: 175 VLQIV-----TLDKIAFNALPEDVRSQVEAAQGEQKEDAEVDVYTHVYLNESGDG----- 224
Query: 231 NKGFHSKFVSVDENRF-FEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNE 287
+SK+ V E E + PYI R E YGRS E L ++ L
Sbjct: 225 ----YSKYEEVAEAVVPGSEAEYPLEECPYIPVRMVRIDGESYGRSYVEEYLGDLKSLEN 280
Query: 288 TVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYH 347
+ + ++ + + L R+ F ++
Sbjct: 281 LQESIVKMAMITAKVIGLVDPAGITQVRRLTAAQSGAFVPGRKQDIEFLQLEKSGDFTVA 340
Query: 348 EELNR-LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAM 406
+ ++ ++ + F+L+ V +A E E +G + L E +
Sbjct: 341 KNVSDTIEARLSYAFMLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPL 399
Query: 407 ISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
+ L L + +PE P +E + + + + + L
Sbjct: 400 VRVLLKQLQATQQIPELPKEAVEPTISTGLEAIG------RGQDLDKLERCIAAWSALKA 453
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTP-AVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQ 525
GD D ++ + A A ++ + + Q+ Q + Q
Sbjct: 454 LEGD----DDLNLANLKLRIANAIGLDTAGMLLTQEQKNALMAQQGAQIATQQGAAALGQ 509
Query: 526 LQQTSQDIG 534
Sbjct: 510 GMAAQATAS 518
>gi|326536937|ref|YP_004306344.1| head-tail connector protein [Pseudomonas phage phiIBB-PF7A]
gi|318054513|gb|ADV35689.1| head-tail connector protein [Pseudomonas phage phiIBB-PF7A]
Length = 535
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 79/566 (13%), Positives = 161/566 (28%), Gaps = 57/566 (10%)
Query: 3 QRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEAC 54
+ + + ++ LK+ R E P + + G+
Sbjct: 7 GLAEEGAKAVYDRLKSDRAPYETRAENCAKVTIPSLFPKESDNSSTNYTTPYQAVGARGV 66
Query: 55 IKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERS 114
L++ + + P + W L S + + + V + V L + E +
Sbjct: 67 NNLAAKVHMALF-PLEPWMKLKVSEWQAKQLV-TDPEELAMVEQGLSMVERILMSYMEAN 124
Query: 115 RSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDS 174
+ L +V G GC Y+ + +G L N + + V
Sbjct: 125 S--YRTTLHELIRQLVIAGAGCLYL---PPPESSSQGSPMKLYTLHNHVVQRDAFGNV-- 177
Query: 175 VYREFTFTVDQI--VSKWGDKVLSSKMKSAL--ARNENERFTIIHAVYPKSLTDKKKDKG 230
QI + + L +++ L +E + VY D
Sbjct: 178 ---------LQICTLDRVAFAALPEDVRTKLDGEHKPDEEIEVYTHVY--------LDDE 220
Query: 231 NKGFHSKFVSVDENRFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNET 288
+ + S E + Q P++ R+ R E YGRS E + L
Sbjct: 221 SGDYLSYQEIDGEEVEGTDGQYPREAMPWVAVRWTKRDGEHYGRSHVEEYQGDLDSLENL 280
Query: 289 VNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHE 348
+ +F ++ + + L R+ F + +
Sbjct: 281 HEAMIKFSMIASKVVGLVNPNGITQVRRLTKAQTGAFVPGRKADIEFLQLDKAADFSVAK 340
Query: 349 ELNR-LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
+ +++ + +F+L+ V + +A E RE +G + L E +I
Sbjct: 341 SVADAIEQRLSYVFMLN-SAVQRNGERVTAEEIRYVARELEDTLGGVYSILSQELQLPII 399
Query: 408 SRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVK 467
L+ L + +P+ P VE L + Q + + LQ + V L
Sbjct: 400 RILLNQLQATQQIPDMPKEAVEPTVSTGVE---ALGRGQDLDKMTQFLQALQLVAPLEND 456
Query: 468 TGDPSCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQRRVMEEQHLQQQL 526
++ + A L+ E + Q++ +
Sbjct: 457 QD-------LNITTIKLRLANAMGLDTSGLLLTQEE----KAQKQAEMMAQTGGENLAGA 505
Query: 527 QQTSQDIGAKAAGRAMEKKLTHDMME 552
M+ + M+
Sbjct: 506 AGAGAGAMMTQDPDTMQDAMATAGMD 531
>gi|61806424|ref|YP_214201.1| T7-like head-to-tail connector [Prochlorococcus phage P-SSP7]
gi|61374349|gb|AAX44203.1| T7-like head-to-tail connector [Prochlorococcus phage P-SSP7]
gi|265525461|gb|ACY76227.1| head-tail connector protein [Prochlorococcus phage P-SSP7]
Length = 522
Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats.
Identities = 67/505 (13%), Positives = 157/505 (31%), Gaps = 63/505 (12%)
Query: 8 DIQDRFNYLKNQRGELNYWMEELTGFLYPY--KNNAQLRM--------WDTTGSEACIKL 57
++R+N L R E + PY ++ R W + G++ C+ L
Sbjct: 2 KARERYNQLTTARQMFLDKAVECSELTLPYLIDDDISSRPNHKSLTVPWQSVGAKCCVTL 61
Query: 58 SSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSG 117
++ L + PP + L L + ++ ++ + + S
Sbjct: 62 AAKLMLAVLPPQTSFFKLQVRDDKLGEELDPQIRS--ELDLSFSKMERMIMD--YIAASN 117
Query: 118 FVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYR 177
+ ++ G +M D + PL+ ++ + V +
Sbjct: 118 DRVAVHQALKHLIVGGNALIFMGKDG----------LKTFPLTRYVINRDGDGNVLEIVT 167
Query: 178 EFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSK 237
+ + + + + ++ + + N++ T K DK + +
Sbjct: 168 KELISRKVLDIELPEPKPNTGIDESSTTNDDVTI----------YTYVKLDKSSGRW--V 215
Query: 238 FVSVDENRFFEEKQI----ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELA 293
+ ++ + + P++ R+ E YGR E L ++ L+ L
Sbjct: 216 WHQEAFDKIIPDSRSTAPKNASPWLPLRFNTVDGEDYGRGRVEEFLGDLKSLDGLSQSLI 275
Query: 294 QFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSR--EGRS----LFQPVQFGNPLPYH 347
+ + + + KP + +GR + Q + +
Sbjct: 276 EGAAAASKVVFLVSPSS-----TTKPATIAKAGNGAIVQGRPEDVAVIQVGKTADFSTAA 330
Query: 348 EELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
+++ + FL+ + + +A E E +G + L EF+ +
Sbjct: 331 NMATAIEKRLLEAFLV---MNVRNAERVTAEEVRLTQLELEQQLGGIFSLLVIEFLIPYL 387
Query: 408 SRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVK 467
+R L +L +P+ P V + L + Q ES+ + V +
Sbjct: 388 NRTLLVLQRSNQIPKLPKDIVRPTI---VAGVNALGRGQDRESLTA------FVGTIAQT 438
Query: 468 TGDPSCMDHMDTDRVSRFSLWATNT 492
G + M +++ + A
Sbjct: 439 LGPEALMQYLNPLEAIKRLAAAQGI 463
>gi|326633070|ref|YP_004306681.1| predicted head to tail joining protein [Salmonella phage Vi06]
gi|301170543|emb|CBV65231.1| predicted head to tail joining protein [Salmonella phage Vi06]
Length = 536
Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats.
Identities = 96/567 (16%), Positives = 165/567 (29%), Gaps = 77/567 (13%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----KNNAQLRM---WDTTGSE 52
+ + AK + + LKN R + + P +NA W G+
Sbjct: 8 LAEDGAKSV---YERLKNDRAPYETRAQNCAQYTIPSLFPKDSDNASTDYTTPWQAVGAR 64
Query: 53 ACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRE 112
L+S L + P Q W L S + L D +K V E V + + E
Sbjct: 65 GLNNLASKLMLALF-PMQTWMRLTISEYEAKQLLSDPDGLAK-VDEGLSMVERIIMNYIE 122
Query: 113 RSRSGFVGC-LQSFYTSVVEFGTGCFYM-EADVDEKGLEEGIRYISVPLSNVYMSVNHQN 170
S L +V G Y+ E D + R LS+ + +
Sbjct: 123 ---SNSYRVTLFEALKQLVVAGNVLLYLPEPDGSNYNPMKLYR-----LSSYVVQRDAFG 174
Query: 171 VVDSVYREFTF-TVDQIVSKWGDKVLSSKMKSALA-----RNENERFTIIHAVYPKSLTD 224
V T DQI +G L ++ A+ + +E + +Y +
Sbjct: 175 NV------LQMVTRDQIA--FG--ALPEDVRKAVEGQGGDKKPDEVIDVYTHIYLDEESG 224
Query: 225 KKKDKGNKGFHSKFVSVDENRF-FEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPT 281
+ + + + PYI R E YGRS E L
Sbjct: 225 EYLR---------YEEAEGMEVQGSDGSYPKEACPYIPIRMVRLDGESYGRSYIEEYLGD 275
Query: 282 IRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG 341
+R L + + +S + + L R F ++
Sbjct: 276 LRSLENLQEAIVKMSMISSKVIGLVNPAGITQPRRLTKAQTGDFVTGRPEDISFLQLEKQ 335
Query: 342 NPLPYHEELNR-LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQS 400
+ ++ ++ + F+L+ V +A E E +G + L
Sbjct: 336 ADFTVAKSVSDAIEARLSFAFMLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQ 394
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E ++ L L + +PE P +E + + + + V
Sbjct: 395 ELQLPLVRVLLKQLQATQQIPELPKEAVEPTISTGLEAIG------RGQDLDKLERCVAA 448
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQ 520
+ DP ++ + A I T E +Q
Sbjct: 449 WAAMAPMRDDPD----INLAMIKLRIANAIGIDTSGILLTEE--------------QRQQ 490
Query: 521 HLQQQLQQTSQDIGAKAAGRAMEKKLT 547
+ QQ Q D GA A G+ M + T
Sbjct: 491 KMAQQSMQLGMDSGAAALGQGMAAQAT 517
>gi|310005679|gb|ADP00067.1| head-tail connector protein [Cyanophage 9515-10a]
Length = 534
Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats.
Identities = 82/566 (14%), Positives = 171/566 (30%), Gaps = 77/566 (13%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYP---YKNN------AQLRMWDTTGSEACIKL 57
K+ + R+N L R + E P +N+ W + G++ + L
Sbjct: 2 KNARQRYNKLSTDREQFLNVAYECAELTIPTLLMRNDKPPAYAQFKTPWQSVGAKGVVTL 61
Query: 58 SSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSG 117
+S L + PP + L S + E ++ ++ + S
Sbjct: 62 ASKLMLGLLPPSTSFFKLQLDDSKLGIEIPPE--AKSEMDLSFAKIERQIMDAIAASTDR 119
Query: 118 FVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYR 177
+ S +V G YM + PL+ + + V +
Sbjct: 120 --VQIFSAIKHLVVTGNALLYMGKQGMKM----------YPLNRYVVERDGNGDVIEIVT 167
Query: 178 EFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSK 237
+ + ++ ++ + N ++ + V K
Sbjct: 168 KEKVS-RDLI---PIELNDDSVVDDDTNNADKDVDVYTCV--------KLGAKG-----W 210
Query: 238 FVSVDENRFF---EEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNEL 292
+ + + E + P++ R+ E YGRS E L ++ L + L
Sbjct: 211 YWHQEVHDILIPGSEGKAPKDKNPFLPLRFVTVDGEDYGRSRVEEFLGDLKSLEALMQAL 270
Query: 293 AQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSR--EGRS----LFQPVQFGNPLPY 346
+ + + KPG + +GR + Q + +
Sbjct: 271 VEGSAAAAKVVFTVSPSSV-----TKPGTLANAGNGAIIQGRPDDIGVIQVGKTADFRTA 325
Query: 347 HEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAM 406
E +N L++ + F L + +A E E +G L L +EF+
Sbjct: 326 FELVNTLEKRLSEAF---LILNVRQSERTTAEEVRMTQMELEQQLGGLFSLLTTEFLIPY 382
Query: 407 ISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
++R++ L +P+ P V + L + Q +++ V V +
Sbjct: 383 LNRKMHSLTLAKKIPKIPKNVVNPTI---VAGINALGRGQDRDAL------VQFVTTIAQ 433
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQL 526
G + +++ D + A +V ++ + E ++ Q
Sbjct: 434 TMGPEALAQYINPDEAIKRLAAAQGI---------DVLNLVKSMEELDAQKQQAQQQAMQ 484
Query: 527 QQTSQDIGAKAAGRAMEKKLTHDMME 552
Q G A M+ ++ME
Sbjct: 485 QNLMGQAGQLAGAPLMDPSKNPEVME 510
>gi|38424264|gb|AAR19412.1| head-tail connector protein [uncultured cyanophage]
Length = 517
Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats.
Identities = 69/517 (13%), Positives = 155/517 (29%), Gaps = 63/517 (12%)
Query: 8 DIQDRFNYLKNQRGELNYWMEELTGFLYPY--KNNAQLRM--------WDTTGSEACIKL 57
+ + R++ L ++R + + + PY + + + + W + G++ + L
Sbjct: 2 NAKTRYDELSSERTQFLDEARQASELTLPYLIRGHEETYIGMKQLKTPWQSVGAKGVVTL 61
Query: 58 SSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSG 117
+S L + PP + L S + ++ +V T+ + S
Sbjct: 62 ASKLMLALLPPQTSFFKLQLDESQIGEEFGPDIKS--ELDLSFAKVERTI--LENIAASD 117
Query: 118 FVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYR 177
+ +V G +M D + PL+ + + V +
Sbjct: 118 DRVAVHQALQHLVVAGNALIFMGKDGLKV----------FPLNRYVVERDGNGNVLEIVT 167
Query: 178 EFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSK 237
+ + + + + + +E H +
Sbjct: 168 KERISKKLLAEEMPEYE--EPVNEDSNFRPDECDVYTHVRRENNRV-------------V 212
Query: 238 FVSVDENRFFEEKQ----IATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELA 293
+ + + I P++ R+ E YGR + + ++ L L
Sbjct: 213 WHQEVHGKVLPKSISKAPIDANPWLPLRFNTVDGEAYGRGRVGQFIGDLKSLEALSQALV 272
Query: 294 QFGRLSLHPPTIAVSEAKQRNFDLKP---GYMNIGALSREGR-SLFQPVQFGNPLPYHEE 349
+ + + + + L G + G G + + FG +
Sbjct: 273 EGSAAAAKVVFVVAPSSTTKPATLASAGNGAIVSGRPDDIGVIQVGKTADFGTAFQMTQV 332
Query: 350 LNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISR 409
R + F L + +A E E +G L L EF+ ++R
Sbjct: 333 YER---RLSEAF---LILNPRNAERVTAEEVRMTQLELEQQLGGLFSLLTVEFLVPYLNR 386
Query: 410 ELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTG 469
+L + + +P P + V + L + Q A S+A Q + T+ +
Sbjct: 387 KLSVAQKRNEIPRIPKGIVKPTIVAGV---NALGRGQDAISLA---QFLQTIAQTMGPEA 440
Query: 470 DPSCMDHMDTDRVSRFSLWATNTPA-VLIRDTAEVED 505
+++ V + A L+R E++
Sbjct: 441 ---IAQYINPTEVVKRLAAAQGIDILNLVRSMEELQA 474
>gi|326424990|ref|YP_004286212.1| virion structural protein [Pseudomonas phage phi15]
gi|325048394|emb|CBZ42007.1| virion structural protein [Pseudomonas phage phi15]
Length = 533
Score = 117 bits (292), Expect = 7e-24, Method: Composition-based stats.
Identities = 82/520 (15%), Positives = 153/520 (29%), Gaps = 56/520 (10%)
Query: 3 QRSAKDIQDRFNYLKNQRGELNYWMEELTGF----LYP-YKNNAQLRM---WDTTGSEAC 54
+ + + ++ LK R E L+P +NA W G+
Sbjct: 7 GLAEEGAKATYDRLKTDRSPYETRAENCAKVTIGSLFPAESDNASTNYATPWQAVGARGV 66
Query: 55 IKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERS 114
LS+ + + P + W L S + L + + V V + + E +
Sbjct: 67 NNLSAKVHLALF-PLEPWMKLKVSEWQAKQMLGNPEDLAA-VEAGLSMVERVMMSYMEAN 124
Query: 115 RSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDS 174
+ L +V G Y+ +G + + N + V
Sbjct: 125 S--YRTTLHELIRQLVVAGNALLYLPNPEGTQGSPMKM----YTMHNYVCQRDSFGNV-- 176
Query: 175 VYREFTFTVDQIV--SKWGDKVLSSKMKSALA--RNENERFTIIHAVYPKSLTDKKKDKG 230
QIV K L ++S L R +E + VY +D
Sbjct: 177 ---------LQIVTLDKVAFAALPEDVRSKLDGDRTPDEEVEVYTHVY--------RDDE 219
Query: 231 NKGFHSKFVSVDENRFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNET 288
+ F S E + Q P+I R+ R E YGRS E L ++ L
Sbjct: 220 SGDFLSYQEVDGEEIEGTDGQYPVDAMPWIAVRWTKRDGEHYGRSHVEEYLGDLQSLENL 279
Query: 289 VNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHE 348
+ +F ++ + + L R+ F ++ +
Sbjct: 280 SEAMIKFSMIASKVIGLVNPNGVTQVRRLTSAQTGAFVPGRKADIEFLQLEKAADFNIAK 339
Query: 349 ELNR-LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMI 407
+ ++ + +F+L+ V +A E RE +G + L E ++
Sbjct: 340 AVADNIESRLSYVFMLN-SAVQRGGERVTAEEIRYVARELEDTLGGVYSILSQELQLPIV 398
Query: 408 SRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQA-ESVASALQGVNTVVELGV 466
L+ L + +P+ P S + + + LQ +N + +
Sbjct: 399 RILLNQLQATQQIPDLPTEAVEPT-------VSTGAEALGRGQDLDKMLQFLNALTMVTP 451
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVED 505
D ++ + A LI E
Sbjct: 452 LENDQD----LNVKTLKLRIAQAIGVDTTNLILTEDEKAQ 487
>gi|189427230|ref|YP_001949780.1| gp8 [Salmonella phage phiSG-JL2]
gi|189085883|gb|ACD75698.1| gp8 [Salmonella phage phiSG-JL2]
Length = 535
Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats.
Identities = 84/526 (15%), Positives = 154/526 (29%), Gaps = 64/526 (12%)
Query: 10 QDRFNYLKNQRGELNYWMEELTGFLYPY-----KNNAQLRM---WDTTGSEACIKLSSLL 61
+ ++ L N R E + P +N W G+ L+S L
Sbjct: 15 KATYDRLTNDRRAYETRAENCAQYTIPSLFPKESDNESTDYTTPWQAVGARGLNNLASKL 74
Query: 62 SSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGC 121
+ P Q W L S + + D +K V E V + + E S
Sbjct: 75 MLALF-PMQSWMKLTISEYEAKQLVGDPDGLAK-VDEGLSMVERIIMNYIE---SNSYRV 129
Query: 122 -LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
L ++ G Y+ + R LS+ + + V +
Sbjct: 130 TLFECLKQLIVAGNALLYLPEPEGSYNPMKLYR-----LSSYVVQRDAYGNVLQIV---- 180
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENER-----FTIIHAVYPKSLTDKKKDKGNKGFH 235
T DQI +G L ++SA+ + E+ + VY +
Sbjct: 181 -TRDQIA--FG--ALPEDVRSAVEKAGGEKKMDEMVDVYTHVYLDEESGD---------- 225
Query: 236 SKFVSVDENRFFEEKQ------IATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETV 289
++ +E E PYI R E YGRS E L +R L
Sbjct: 226 --YLKYEEVEDVEIDGSDATYPTDAMPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQ 283
Query: 290 NELAQFGRLSLHPPTIAVSEAKQRNFDLKPG-YMNIGALSREGRSLFQPVQFGNPLPYHE 348
+ + +S + + L + RE Q + +
Sbjct: 284 EAIVKMSMISAKVIGLVNPAGITQPRRLTKAQTGDFVPGRREDIDFLQLEKQADFTVAKA 343
Query: 349 ELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIS 408
++++ + F+L+ F V +A E E +G + L E ++
Sbjct: 344 VSDQIEARLSYAFMLN-FAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPLVR 402
Query: 409 RELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKT 468
L L + +PE P +E + + + + ++ L
Sbjct: 403 VLLKQLQATSQIPELPKEAGEPTISTGLEAIG------RGQDLDKLERCISAWAALAPMQ 456
Query: 469 GDPSCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQ 513
GDP ++ + A ++ + + + Q Q
Sbjct: 457 GDPD----INLAVIKLRIANAIGIDTSGILLTDEQKQALMMQDAAQ 498
>gi|119637774|ref|YP_919010.1| Head-to-tail joining protein [Yersinia phage Berlin]
gi|194100496|ref|YP_002003341.1| gp8 [Yersinia phage Yepe2]
gi|119391805|emb|CAJ70678.1| hypothetical protein [Yersinia phage Berlin]
gi|193201229|gb|ACF15710.1| gp8 [Yersinia phage Yepe2]
Length = 535
Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats.
Identities = 90/532 (16%), Positives = 160/532 (30%), Gaps = 64/532 (12%)
Query: 10 QDRFNYLKNQRGELNYWMEELTGFLYPY-----KNNAQLRM---WDTTGSEACIKLSSLL 61
+ ++ LKN R E + P +NA W G+ L+S L
Sbjct: 16 KAVYDALKNDRNSYETRAENCAKYTIPSLFPKDSDNASTDYTTPWQAVGARGLNNLASKL 75
Query: 62 SSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGC 121
+ P Q W L S + + + A KV E V L + E S
Sbjct: 76 MLALF-PMQTWMKLTISEFEAKQLVA-QPAELAKVEEGLSMVERILMNYIE---SNSYRV 130
Query: 122 -LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
L +V G Y+ + R LS+ + +
Sbjct: 131 TLFETLKQLVVAGNALLYIPEPEGTYNPMKLYR-----LSSYVVQRDAFG---------- 175
Query: 181 FTVDQIV--SKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKF 238
TV QIV K L +++++ ++ + + VY D++ + +
Sbjct: 176 -TVLQIVTLDKTAYAALPEDVRNSMDSSQEHKGDEMIDVYTHIYLDEESGE--------Y 226
Query: 239 VSVDENRFFEEKQIAT------FPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNEL 292
+ +E E + PYI R E YGRS E L +R L +
Sbjct: 227 LKYEEIDGVEVEGTDASYPVDACPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAI 286
Query: 293 AQFGRLSLHPPTIA-VSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELN 351
+ +S + + Q K + + E S Q + +
Sbjct: 287 VKMSMISAKVIGLVNPAGITQVRRLTKAQTGDFVSGRPEDISFLQLEKAADFSVARAVSE 346
Query: 352 RLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISREL 411
+++ + F+L+ V +A E E +G + L E M+ L
Sbjct: 347 QIEGRLSYAFMLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPMVRVLL 405
Query: 412 DILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDP 471
L + +PE P +E L + Q + + + L GDP
Sbjct: 406 KQLQATNQIPELPKEAVEPTISTGME---ALGRGQ---DLDKLERCIAAWSALAPMQGDP 459
Query: 472 SCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQRRVMEEQHL 522
++ + A +++ E +Q+E+
Sbjct: 460 D----INIATIKLRIANAIGIDTSGILKTPEE-----KQQEMAEAAQGTAMQ 502
>gi|212671411|ref|YP_002308410.1| head-to-tail joining protein [Kluyvera phage Kvp1]
gi|211997255|gb|ACJ14572.1| head-to-tail joining protein [Kluyvera phage Kvp1]
Length = 535
Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats.
Identities = 89/534 (16%), Positives = 157/534 (29%), Gaps = 65/534 (12%)
Query: 10 QDRFNYLKNQRGELNYWMEELTGFLYPY-----KNNAQLRM---WDTTGSEACIKLSSLL 61
+ ++ LKN R E + P +NA W G+ L+S L
Sbjct: 16 KAVYDALKNDRNSYETRAENCAKYTIPSLFPKDSDNASTDYTTPWQAVGARGLNNLASKL 75
Query: 62 SSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGC 121
+ P Q W L S + + + A KV E V L + E S
Sbjct: 76 MLALF-PMQTWMKLTISEFEAKQLVA-QPAELAKVEEGLSMVERILMNYIE---SNSYRV 130
Query: 122 -LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
L +V G Y+ + R LS+ + +
Sbjct: 131 TLFETLKQLVVAGNALLYIPEPEGTYNPMKLYR-----LSSYVVQRDAFG---------- 175
Query: 181 FTVDQIV--SKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKF 238
TV QIV K L ++++L + + VY D++ + +
Sbjct: 176 -TVLQIVTLDKTAYAALPEDVRNSLDSGTEHKGDEMIDVYTHIYLDEESGE--------Y 226
Query: 239 VSVDENRFFEEKQIAT------FPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNEL 292
+ +E E PYI R E YGRS E L +R L +
Sbjct: 227 LKYEEIDGVEVDGTDASYPVDACPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAI 286
Query: 293 AQFGRLSLHPPTIA-VSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELN 351
+ +S + + Q K + + E S Q + +
Sbjct: 287 VKMSMISAKVIGLVNPAGITQVRRLTKAQTGDFVSGRPEDISFLQLEKAADFSVAKAVSE 346
Query: 352 RLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISREL 411
+++ + F+L+ V +A E E +G + L E M+ L
Sbjct: 347 QIEGRLSYAFMLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPMVRVLL 405
Query: 412 DILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDP 471
L + +PE P +E L + Q + + + L DP
Sbjct: 406 KQLQATNQIPELPKEAVEPTISTGME---ALGRGQ---DLDKLERCIAAWSALAPMQNDP 459
Query: 472 SCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQRRVMEEQHLQQ 524
++ + A +++ E +++ + L+
Sbjct: 460 D----INIATIKLRIANAIGIDTSGILKTPEE------KQQEMAEAAQGTALEN 503
>gi|310005857|gb|ADP00242.1| head-tail connector protein [Cyanophage Syn26]
Length = 521
Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats.
Identities = 71/499 (14%), Positives = 149/499 (29%), Gaps = 51/499 (10%)
Query: 8 DIQDRFNYLKNQRGELNYWMEELTGFLYPY--KNNAQLRM--------WDTTGSEACIKL 57
+ ++++N L + R + + + PY ++ R W + G++ + L
Sbjct: 2 NAREKYNQLSSARRQFLDKAVQCSELTLPYLIDDDISSRPNHKSLAVPWQSVGAKCVVTL 61
Query: 58 SSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSG 117
++ L + PP + L L + + S
Sbjct: 62 AAKLMLAVLPPQTSFFKLQVRDDKLGQELDPQIRSELD----LSFAKMERMIMEYIAASN 117
Query: 118 FVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYR 177
+ ++ G YM D + PL+ + + V +
Sbjct: 118 DRVAIHQALKHLIVGGNALIYMHKDG----------LKTFPLTRYVVERDGDGNVLCIVT 167
Query: 178 EFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSK 237
+ + + + + +S + +E ++ V ++ KD G +H +
Sbjct: 168 KELISRKVLDIELPEPEPNSVV--------DESHSVADDVTIYTMVKLDKDSGRWVWHQE 219
Query: 238 FVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGR 297
P++ R+ E YGR E L ++ L+ L +
Sbjct: 220 AFDKIIPDTRSTAPKKASPWLPLRFNTVDGEDYGRGRVEEFLGDLKSLDGLSQALIEGAA 279
Query: 298 LSLHPPTIAVSEAKQRNFDLKPGYMNIGALSR--EGRSLFQPVQFGNPLPYHEELNRLKE 355
+ + + KP + +GR V + +
Sbjct: 280 AASKVIFLVSPSS-----TTKPATIAKAGNGAIVQGRPEDVAVIQVGKTADFATAANMAQ 334
Query: 356 SIRSLFLLDLFQVLDDKASR-SAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDIL 414
I L + A R +A E E +G + L EF+ ++R L +L
Sbjct: 335 GIEKRMLEAFLVMNVRNAERVTAEEVRLTQLELEQQLGGIFSLLTVEFLIPYLNRTLLVL 394
Query: 415 DSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSC- 473
+P+ P + V + L + Q ES+ Q + T+ + T P
Sbjct: 395 QRSNQIPKLPKDIVRPTIVAGV---NALGRGQDRESLT---QFIGTIAQ----TLGPEAL 444
Query: 474 MDHMDTDRVSRFSLWATNT 492
M +++ + A
Sbjct: 445 MQYINPQEAIKRLAAAQGI 463
>gi|312436374|gb|ADQ83183.1| head to tail joining protein [Yersinia phage Yep-phi]
Length = 535
Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 90/532 (16%), Positives = 161/532 (30%), Gaps = 64/532 (12%)
Query: 10 QDRFNYLKNQRGELNYWMEELTGFLYPY-----KNNAQLRM---WDTTGSEACIKLSSLL 61
+ ++ LKN R E + P +NA W G+ L+S L
Sbjct: 16 KAVYDALKNDRNSYETRAENCAKYTIPSLFPKDSDNASTDYTTPWQAVGARGLNNLASKL 75
Query: 62 SSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGC 121
+ P Q W L S + + + A KV E V L + E S
Sbjct: 76 MLALF-PMQTWMKLTISEFEAKQLVA-QPAELAKVEEGLSMVERILMNYIE---SNSYRV 130
Query: 122 -LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
L +V G Y+ + R LS+ + +
Sbjct: 131 TLFETLKQLVVAGNALLYIPEPEGTYNPMKLYR-----LSSYVVQRDAFG---------- 175
Query: 181 FTVDQIV--SKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKF 238
TV QIV K L +++++ ++ + + VY D++ + +
Sbjct: 176 -TVLQIVTLDKTAYAALPEDVRNSMDSSQEHKGDEMIDVYTHIYLDEESGE--------Y 226
Query: 239 VSVDENRFFEEKQIAT------FPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNEL 292
+ +E E + PYI R E YGRS E L +R L +
Sbjct: 227 LKYEEIDGVEVEGTDASYPVDACPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAI 286
Query: 293 AQFGRLSLHPPTIA-VSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELN 351
+ +S + + Q K + + E S Q + +
Sbjct: 287 VKMSMISAKVIGLVNPAGITQVRRLTKAQTGDFVSGRPEDISFLQLEKAADFSVARAVSE 346
Query: 352 RLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISREL 411
+++ + F+L+ V +A E E +G + L E M+ L
Sbjct: 347 QIEGRLSYAFMLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPMVRVLL 405
Query: 412 DILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDP 471
L + +PE P +E L + Q + + ++ L GDP
Sbjct: 406 KQLQATNQIPELPKEAVEPTISTGME---ALGRGQ---DLDKLERCISAWSALAPMQGDP 459
Query: 472 SCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQRRVMEEQHL 522
++ + A +++ E +Q+E+
Sbjct: 460 D----INIATIKLRIANAIGIDTSGILKTPEE-----KQQEMAEAAQGTAMQ 502
>gi|29366727|ref|NP_813772.1| head-tail connector protein [Pseudomonas phage gh-1]
gi|29243586|gb|AAO73165.1|AF493143_26 head-tail connector protein [Pseudomonas phage gh-1]
Length = 543
Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats.
Identities = 90/571 (15%), Positives = 172/571 (30%), Gaps = 67/571 (11%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY---KNNAQLRMWDTTGSEA----- 53
+ + + + LKN R E P K++ TT +A
Sbjct: 7 EGLAEEGAKAVYERLKNDRVPYETRAENCAKVTIPSLFPKDSDNSSTDYTTPWQAVGARG 66
Query: 54 CIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRER 113
LS+ + + P Q W L S + + + ++ V + V L + E
Sbjct: 67 LNNLSAKVMLALF-PLQSWMKLKVSEWQAKQLV-SDPSQLAVVEQGLGMVERILMSYMEA 124
Query: 114 SRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVD 173
+ + L + GT Y+ ++ L N + + V
Sbjct: 125 NS--YRVTLFELIRQLALAGTALIYLPPPDASSNSYNPMKL--YTLHNHVVQRDAFGNV- 179
Query: 174 SVYREFTFTVDQIV--SKWGDKVLSSKMKSAL----ARNENERFTIIHAVYPKSLTDKKK 227
QIV K L ++++L + + +Y +
Sbjct: 180 ----------LQIVTLDKVAYAALPEDVRNSLSGGQEYKPEQELEVYTHIYIDDESGD-- 227
Query: 228 DKGNKGFHSKFVSVDENRFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRL 285
F S + Q P+I R+ R E YGRS E L + L
Sbjct: 228 ------FLSYQEIEGVEVDGSDGQYPQDALPWIAVRWTKRDGEHYGRSHVEEYLGDLNSL 281
Query: 286 NETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLP 345
+ +F +S + + L R+ F ++
Sbjct: 282 ESLNEAMIKFAMISSKVVGLVNPNGITQVRRLVKAQTGDFVAGRKADIEFLQLEKTADFT 341
Query: 346 YHEELNR-LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIG 404
+ + ++ + +F+L+ V +A E E +G + L E
Sbjct: 342 VAKSVADAIEARLSYVFMLN-SAVQRSGERVTAEEIRYVASELEDTLGGVYSILSQELQL 400
Query: 405 AMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVEL 464
++ L+ L + +P P E L + Q + Q +N V +
Sbjct: 401 PIVRVLLNQLQATQQIPNLPQEAVEPTVTTGAE---ALGRGQ---DLDKLTQFLNAVATV 454
Query: 465 GVKTGDPSCMDHMDTDRVSRFSLWATNTP-AVLIRDTAEVEDIRQQREVQRRVMEEQHLQ 523
GDP ++ + + A A L+ AE + + ++ L+
Sbjct: 455 SQLNGDPD----LNVNNIKLRLANAIGIDTAGLLLTEAE----------KAQAQSQEMLK 500
Query: 524 QQLQQTSQDIGAKAAGRAMEKKLTHDMMENS 554
Q + IG+ A +A + + ME++
Sbjct: 501 QGGLNAAAGIGSGVAAQA---TASPEAMESA 528
>gi|18640510|ref|NP_570351.1| head-tail connector protein [Synechococcus phage P60]
gi|18478740|gb|AAL73289.1| head-tail connector protein [Synechococcus phage P60]
Length = 555
Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats.
Identities = 78/554 (14%), Positives = 161/554 (29%), Gaps = 71/554 (12%)
Query: 10 QDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSSLL 61
Q ++ L+ R + + PY + W + GS+ L+S L
Sbjct: 6 QAKYMMLRADREDYLDSGRQSARLTLPYILTDEGHVQGGYLPTPWQSVGSKGVNVLASKL 65
Query: 62 SSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGC 121
+ P + L + + E ARS ++ ++ + S
Sbjct: 66 MLSLFPVNTSFFKLQINDAEIDNLGMDEQARS-EIDLSLSRIERIVTQDIAESSDRVHLE 124
Query: 122 LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTF 181
+ ++ G Y + PL +S + + V + E
Sbjct: 125 M--AMKHLIVTGNALLY----------QGKKNLKLYPLDRFVVSRDGEGNVMEIVTEEQI 172
Query: 182 TVDQIVSKW----GDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSK 237
+ ++ G + + T + + K K N
Sbjct: 173 DRSLLPEEFQKVGGLEGAPDS-NAVGEDGPKMGVT--------APGGRDKGKSNDALVYT 223
Query: 238 FVSVDENRF------------FEEKQ--IATFPYIVGRYRVRADEIYGRSPAMEALPTIR 283
+V + + P+I R+ + E YGR E + ++
Sbjct: 224 YVCRKDGQVKWHQECDGKVIPGSNSSAPYTHNPWIPLRFNIVDGEAYGRGRVEEFMGDLK 283
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRS----LFQPVQ 339
L + + S + A + +L + +GR + Q +
Sbjct: 284 SLEALSQAMVEGSAASAKVVFMVSPSATTKPQNL---ALAANGAIIQGRPDDVSVVQANK 340
Query: 340 FGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQ 399
+ E + +L++ I F L + +A E +E +G + L
Sbjct: 341 AADFRTVLEMIQKLEQRISDAF---LMLQVRQSERTTATEVQATVQELNEQIGGIYSNLT 397
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVN 459
+E + ++R+L +L Q LP+ P + Q +
Sbjct: 398 TELLQPYLARKLHLLQKQRKLPQLPKDLVQPT---------VVAGLWGVGRGQDKQQLME 448
Query: 460 TVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPA-VLIRDTAEVEDIRQQREVQRRVME 518
+ L G M +++ + A LI E ++Q + Q++ M
Sbjct: 449 FITTLAQTMGPEIAMKYINPTEFIKRLAAAQGIDTLQLINSP---ETMKQLGDQQKQDMV 505
Query: 519 EQHLQQQLQQTSQD 532
+ L Q Q ++
Sbjct: 506 QASLINQAGQLAKT 519
>gi|17570823|ref|NP_523332.1| head-to-tail joining protein [Enterobacteria phage T3]
gi|138413|sp|P20323|VHTJ_BPT3 RecName: Full=Head-to-tail joining protein
gi|15714|emb|CAA35152.1| 8 [Enterobacteria phage T3]
gi|17384307|emb|CAC86295.1| head-to-tail joining protein [Enterobacteria phage T3]
Length = 535
Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats.
Identities = 87/558 (15%), Positives = 159/558 (28%), Gaps = 64/558 (11%)
Query: 10 QDRFNYLKNQRGELNYWMEELTGFLYPY-----KNNAQLRM---WDTTGSEACIKLSSLL 61
+ ++ L N R E + P +N W G+ L+S L
Sbjct: 15 KATYDRLTNDRRAYETRAENCAQYTIPSLFPKESDNESTDYTTPWQAVGARGLNNLASKL 74
Query: 62 SSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGC 121
+ P Q W L S + + D +K V E V + + E S
Sbjct: 75 MLALF-PMQSWMKLTISEYEAKQLVGDPDGLAK-VDEGLSMVERIIMNYIE---SNSYRV 129
Query: 122 -LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
L ++ G Y+ + R LS+ + + V +
Sbjct: 130 TLFECLKQLIVAGNALLYLPEPEGSYNPMKLYR-----LSSYVVQRDAYGNVLQIV---- 180
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENER-----FTIIHAVYPKSLTDKKKDKGNKGFH 235
T DQI +G L ++SA+ ++ E+ + VY +
Sbjct: 181 -TRDQIA--FG--ALPEDVRSAVEKSGGEKKMDEMVDVYTHVYLDEESGD---------- 225
Query: 236 SKFVSVDENRFFEEKQ------IATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETV 289
++ +E E PYI R E YGRS E L +R L
Sbjct: 226 --YLKYEEVEDVEIDGSDATYPTDAMPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQ 283
Query: 290 NELAQFGRLSLHPPTIAVSEAKQRNFDLKPG-YMNIGALSREGRSLFQPVQFGNPLPYHE 348
+ + +S + + L + RE Q + +
Sbjct: 284 EAIVKMSMISAKVIGLVNPAGITQPRRLTKAQTGDFVPGRREDIDFLQLEKQADFTVAKA 343
Query: 349 ELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIS 408
++++ + F+L+ V +A E E +G + L E ++
Sbjct: 344 VSDQIEARLSYAFMLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPLVR 402
Query: 409 RELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKT 468
L L + +PE P +E + + + + ++ L
Sbjct: 403 VLLKQLQATSQIPELPKEAVEPTISTGLEAIG------RGQDLDKLERCISAWAALAPMQ 456
Query: 469 GDPSCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQ 527
GDP ++ + A ++ + + + Q Q V
Sbjct: 457 GDPD----INLAVIKLRIANAIGIDTSGILLTDEQKQALMMQDAAQTGVENAAAAGGAGV 512
Query: 528 QTSQDIGAKAAGRAMEKK 545
+A A K
Sbjct: 513 GALATSSPEAMQGAAAKA 530
>gi|326536132|ref|YP_004300566.1| gp8 [Enterobacteria phage 285P]
gi|256861521|gb|ACV32477.1| gp8 [Enterobacteria phage 285P]
Length = 535
Score = 113 bits (284), Expect = 6e-23, Method: Composition-based stats.
Identities = 88/534 (16%), Positives = 158/534 (29%), Gaps = 65/534 (12%)
Query: 10 QDRFNYLKNQRGELNYWMEELTGFLYPY-----KNNAQLRM---WDTTGSEACIKLSSLL 61
+ ++ LKN R E + P +NA W G+ L+S L
Sbjct: 16 KAVYDALKNDRNSYETRAENCAKYTIPSLFPKDSDNASTDYTTPWQAVGARGLNNLASKL 75
Query: 62 SSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGC 121
+ P Q W L S + + + A KV E V L + E S
Sbjct: 76 MLALF-PMQTWMKLTISEFEAKQLVA-QPAELAKVEEGLSMVERILMNYIE---SNSYRV 130
Query: 122 -LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
L +V G Y+ + R LS+ + +
Sbjct: 131 TLFETLKQLVVAGNALLYIPEPEGTYNPMKLYR-----LSSYVVQRDAFG---------- 175
Query: 181 FTVDQIV--SKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKF 238
TV QIV K L +++++ + + + VY D++ + +
Sbjct: 176 -TVLQIVTLDKTAYAALPEDVRNSMDSGQEHKGDEMIDVYTHIYLDEESGE--------Y 226
Query: 239 VSVDENRFFEEKQIAT------FPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNEL 292
+ +E E PYI R E YGRS E L +R L +
Sbjct: 227 LKYEEIDGVEVDGTDASYPVDACPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAI 286
Query: 293 AQFGRLSLHPPTIA-VSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELN 351
+ +S + + Q K + + E S Q + +
Sbjct: 287 VKMSMISAKVIGLVNPAGITQVRRLTKAQTGDFVSGRPEDISFLQLEKAADFSVAKAVSE 346
Query: 352 RLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISREL 411
+++ + F+L+ V +A E E +G + L E M+ L
Sbjct: 347 QIEGRLSYAFMLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPMVRVLL 405
Query: 412 DILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDP 471
L + +PE P +E L + Q + + + L DP
Sbjct: 406 KQLQATNQIPELPKEAVEPTISTGME---ALGRGQ---DLDKLERCIAAWSALAPMQNDP 459
Query: 472 SCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQRRVMEEQHLQQ 524
++ + A +++ E +++ + L+
Sbjct: 460 D----INIATIKLRIANAIGIDTSGILKTPEE------KQQEMAEAAQGTALEN 503
>gi|194100286|ref|YP_002003484.1| gp8 [Enterobacteria phage BA14]
gi|193201281|gb|ACF15761.1| gp8 [Enterobacteria phage BA14]
Length = 535
Score = 113 bits (283), Expect = 8e-23, Method: Composition-based stats.
Identities = 89/527 (16%), Positives = 158/527 (29%), Gaps = 64/527 (12%)
Query: 10 QDRFNYLKNQRGELNYWMEELTGFLYPY-----KNNAQLRM---WDTTGSEACIKLSSLL 61
+ ++ LKN R E + P +NA W G+ L+S L
Sbjct: 16 KAVYDALKNDRNSYETRAENCAKYTIPSLFPKDSDNASTDYTTPWQAVGARGLNNLASKL 75
Query: 62 SSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGC 121
+ P Q W L S + + + A KV E V L + E S
Sbjct: 76 MLALF-PMQTWMKLTISEFEAKQLVA-QPAELAKVEEGLSMVERILMNYIE---SNSYRV 130
Query: 122 -LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
L +V G Y+ + R LS+ + +
Sbjct: 131 TLFETLKQLVVAGNALLYIPEPEGTYNPMKLYR-----LSSYVVQRDAFG---------- 175
Query: 181 FTVDQIV--SKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKF 238
TV QIV K L +++++ + + + VY D++ + +
Sbjct: 176 -TVLQIVTLDKTAYAALPEDVRNSMDSGQEHKGDEMIDVYTHIYLDEESGE--------Y 226
Query: 239 VSVDENRFFEEKQIAT------FPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNEL 292
+ +E E + PYI R E YGRS E L +R L +
Sbjct: 227 LKYEEIDGVEVEGTDASYPVDACPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAI 286
Query: 293 AQFGRLSLHPPTIA-VSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELN 351
+ +S + + Q K + + E S Q + +
Sbjct: 287 VKMSMISAKVIGLVNPAGITQVRRLTKAQTGDFVSGRPEDISFLQLEKAADFSVAKAVSE 346
Query: 352 RLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISREL 411
+++ + F+L+ V +A E E +G + L E M+ L
Sbjct: 347 QIEGRLSYAFMLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPMVRVLL 405
Query: 412 DILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDP 471
L + +PE P +E L + Q + + + L DP
Sbjct: 406 KQLQATNQIPELPKEAVEPTISTGME---ALGRGQ---DLDKLERCIAAWSALAPMQNDP 459
Query: 472 SCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQRRVM 517
++ + A +++ E +Q+E+
Sbjct: 460 D----INIATIKLRIANAIGIDTSGILKTPEE-----KQQEMAESAQ 497
>gi|291335893|gb|ADD95488.1| T7-like head to tail connector [uncultured phage
MedDCM-OCT-S08-C41]
Length = 527
Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats.
Identities = 75/508 (14%), Positives = 161/508 (31%), Gaps = 72/508 (14%)
Query: 8 DIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLRM----------WDTTGSEACIKL 57
++R++ L + R + E + P+ LR+ W + G+++ + L
Sbjct: 3 KAKERYSQLSSDRHQFLDIAVECSELTLPHLITDDLRVRQNHKRLTTPWQSVGAKSVVTL 62
Query: 58 SSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSG 117
++ L + PP + L L E ++ ++ + S
Sbjct: 63 AAKLMLALLPPQTSFFKLQVRDDQLGEELPMEVRS--ELDLSFSKMERMVMDKIAASSDR 120
Query: 118 FVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYR 177
+ ++ G +M D + PL+ +S + V +
Sbjct: 121 --VVVHQALKHLIVGGNALIFMGKDG----------LKNFPLNRFVVSRDGNGYVCEIV- 167
Query: 178 EFTFTVDQIVSK--WGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFH 235
++V++ G + + N +E + V + + N G+
Sbjct: 168 -----TKELVNRKLLGIDPMPDPHTVSGKGNNDEDAEVYTYV---------RRQDNGGW- 212
Query: 236 SKFVSVDENRFFEEKQI----ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNE 291
+ +++ + + P++V R+ E YGR E L +R L
Sbjct: 213 -VWHQEVDDKIIDGSRSTAPKDASPWLVLRFNAVDGEDYGRGRVEEFLGDLRSLEALSQA 271
Query: 292 LAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSR--EGRS----LFQPVQFGNPLP 345
L + + + A KP + +GR + Q + +
Sbjct: 272 LIEGSAAAAKVVFLVNPAA-----TTKPSTIAKAGNGAIVQGRPEDVSVVQVGKTADFGT 326
Query: 346 YHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGA 405
+ +++ + F L + +A E E +G L L EF+
Sbjct: 327 ASQMAQQIERRLGEAF---LLLNIRQSERTTAEEVRLTQLELEQQLGGLFSLLTVEFLKP 383
Query: 406 MISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELG 465
++R L ++ G LP+ P + V + L + Q ES+ + + T+ +
Sbjct: 384 YLARTLMVMQRSGQLPKIPREYVQPQIVAGV---NALGRGQDRESLTA---FIGTIAQ-- 435
Query: 466 VKTGDPSCMDH-MDTDRVSRFSLWATNT 492
T P + +D + A
Sbjct: 436 --TLGPEALMKYIDASEAIKRLAAAQGI 461
>gi|9634032|ref|NP_052106.1| head-to-tail joining protein [Yersinia phage phiYeO3-12]
gi|6599023|emb|CAB63627.1| head-to-tail joining protein [Yersinia phage phiYeO3-12]
Length = 535
Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats.
Identities = 83/526 (15%), Positives = 153/526 (29%), Gaps = 64/526 (12%)
Query: 10 QDRFNYLKNQRGELNYWMEELTGFLYPY-----KNNAQLRM---WDTTGSEACIKLSSLL 61
+ ++ L N R E + P +N W G+ L+S L
Sbjct: 15 KATYDRLTNDRRAYETRAENCAQYTIPSLFPKESDNESTDYTTPWQAVGARGLNNLASKL 74
Query: 62 SSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGC 121
+ P Q W L S + + D +K V E V + + E S
Sbjct: 75 MLALF-PMQSWMKLTISEYEAKQLVGDPDGLAK-VDEGLSMVERIIMNYIE---SNSYRV 129
Query: 122 -LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
L ++ G Y+ + R LS+ + + V +
Sbjct: 130 TLFECLKQLIVAGNALLYLPEPEGSYNPMKLYR-----LSSYVVQRDAYGNVLQIV---- 180
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENER-----FTIIHAVYPKSLTDKKKDKGNKGFH 235
T DQI +G L ++SA+ + E+ + VY +
Sbjct: 181 -TRDQIA--FG--ALPEDVRSAVEKAGGEKKMDEMVDVYTHVYLDEESGD---------- 225
Query: 236 SKFVSVDENRFFEEKQ------IATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETV 289
++ +E E PYI R E YGRS E L +R L
Sbjct: 226 --YLKYEEVEDVEIDGSDATYPTDAMPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQ 283
Query: 290 NELAQFGRLSLHPPTIAVSEAKQRNFDLKPG-YMNIGALSREGRSLFQPVQFGNPLPYHE 348
+ + +S + + L + RE Q + +
Sbjct: 284 EAIVKMSMISAKVIGLVNPAGITQPRRLTKAQTGDFVPGRREDIDFLQLEKQADFTVAKA 343
Query: 349 ELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIS 408
++++ + F+L+ V +A E E +G + L E ++
Sbjct: 344 VSDQIEARLSYAFMLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPLVR 402
Query: 409 RELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKT 468
L L + +PE P +E + + + + ++ L
Sbjct: 403 VLLKQLQATSQIPELPKEAVEPTISTGLEAIG------RGQDLDKLERCISAWAALAPMQ 456
Query: 469 GDPSCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQ 513
GDP ++ + A ++ + + + Q Q
Sbjct: 457 GDPD----INLAVIKLRIANAIGIDTSGILLTDEQKQALMMQDAAQ 498
>gi|26989003|ref|NP_744428.1| head-to-tail joining protein [Pseudomonas putida KT2440]
gi|24983824|gb|AAN67892.1|AE016421_4 head-to-tail joining protein [Pseudomonas putida KT2440]
Length = 524
Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats.
Identities = 78/563 (13%), Positives = 174/563 (30%), Gaps = 71/563 (12%)
Query: 3 QRSAKDIQDRFNYLKNQRGELNYWMEELTGF-----LYPYKNNAQLRMWDT---TGSEAC 54
+ + L R + + + + P + + + + +
Sbjct: 7 EPERGLAASLYAKLAPDRETFLQRARDCSKYSIPTLIPPAGHASGTKFYTPWQAVAARGV 66
Query: 55 IKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERS 114
L + L + PP + L E + L V+ ++ + E +
Sbjct: 67 NNLGAKLLMALLPPNSPFFRL-EIDEFTEEKLTSNPQMHADVQAGLAKIERAVQTEIETT 125
Query: 115 RSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV-D 173
++ G G Y+ + G+++ PL + + V D
Sbjct: 126 A--IRVTGFELLKHLIVGGNGLVYL-------PQQGGMKF--YPLDRYVVRRDPMGNVLD 174
Query: 174 SVYREFTFTVDQIVSKWGDKVLSSKMKSALA---------RNENERFTIIHAVYPKSLTD 224
V + + VL + +S + R+ N+ +I + K T
Sbjct: 175 IV----------VKEEVSLAVLPEEARSLVEPGDDSGDTPRDHNKNVSIYTHITLKGETW 224
Query: 225 KKKDKGNKGFHSKFVSVDENRFFEEKQI---ATFPYIVGRYRVRADEIYGRSPAMEALPT 281
+ V + ++ R+ E YGRS E L
Sbjct: 225 N-----------VYQEVKGQIVPGSRGTYPKDKCAWLPIRFVKIDGENYGRSYVEEYLGD 273
Query: 282 IRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLK--PGYMNIGALSREGRSLFQPVQ 339
I+ L + + S + + +L P + ++ + ++L Q +
Sbjct: 274 IKSLEGLSQAIVEGSAASAKVLFLVNPNGVTSSSELAEAPNGEFVDGVASDVQAL-QLQK 332
Query: 340 FGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQ 399
G+ E +N + E + F+L+ + + +A E E A +G + L
Sbjct: 333 SGDFRVALETINTITERLEFAFMLN-SAIQRNGERVTAEEIRYMAGELEAALGGVYSILS 391
Query: 400 SEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVN 459
EF +++R + + + LPE P + +E + + Q ++
Sbjct: 392 QEFQLPLVNRIMFSMQRRKKLPELPKGTVSPTIVTGMEALG------RGNDLTKLDQFIS 445
Query: 460 TVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQRRVME 518
T++++ P ++ A L++ EV+ +QQ+++Q+ +
Sbjct: 446 TIMQI------PDAASRINWGNYMTRRATALGIDTDGLVKTDQEVQQEQQQQQMQQAMQS 499
Query: 519 EQHLQQQLQQTSQDIGAKAAGRA 541
Q + G +A
Sbjct: 500 GVAPAVQAAGRMMEKGQPDGSQA 522
>gi|310005702|gb|ADP00089.1| head-tail connector protein [Cyanophage NATL1A-7]
Length = 543
Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats.
Identities = 75/515 (14%), Positives = 156/515 (30%), Gaps = 56/515 (10%)
Query: 8 DIQDRFNYLKNQRGELNYWMEELTGFLYPY-------KNNAQLRM---WDTTGSEACIKL 57
+DR+ L R + + E + PY ++ W + G+++ + L
Sbjct: 2 KARDRYAQLTRGRTQFLHTAVECSRLTLPYLVQEDLSSRPEHQKLHTPWQSVGAKSVVNL 61
Query: 58 SSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSG 117
++ L + PP + L + + S S
Sbjct: 62 AAKLMLALLPPQTSFFKLQIQDNKIGVEFDPKIRSEMD----LSFAKMERMVMDYISASN 117
Query: 118 FVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYR 177
+ ++ G +M D + PL+ + + + +
Sbjct: 118 DRVVVHQALKHLIVSGNALIFMGKDG----------LKNYPLNRYVCNRDGNGNICEIVT 167
Query: 178 EFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSK 237
+ + + + +S + +++ ++ Y + + + + F +
Sbjct: 168 KELISRKILGQDLPVPLPNSPGEDGYKTGSDDQDVEVYT-YVRLDDNGRWVWHQEAFDNI 226
Query: 238 FVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGR 297
T P++V R+ E YGR E L IR L L +
Sbjct: 227 LPGSRSTAPK-----NTSPWLVLRFNTVDGEDYGRGRVEEFLGDIRSLEGLSQSLVEGSA 281
Query: 298 LSLHPPTIAVSEAKQRNFDLKPGYMNIGALSR--EGRS----LFQPVQFGNPLPYHEELN 351
+ + + KP + +GR + Q + + E++
Sbjct: 282 AASKVVFLVSPSS-----TTKPKTIADAGNGAIVQGRPDDVGVIQVGKTADFRTAQEQMM 336
Query: 352 RLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISREL 411
+L++ I FL+ + +A E E +G L L EF+ ++R L
Sbjct: 337 QLEKRINEAFLV---LNVRQSERTTAEEVRLTQMELEQQLGGLFSLLTVEFLEPYLNRTL 393
Query: 412 DILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDP 471
IL +P+ P + V + L + Q S ++ T+ + T P
Sbjct: 394 HILQRNKEIPKIPKESVRPQIIAGV---NALGRGQ---DEESLIRFAQTLSQ----TVGP 443
Query: 472 SCMDH-MDTDRVSRFSLWATNTPA-VLIRDTAEVE 504
M +D + A A LI+ +
Sbjct: 444 EMMVKYLDPGEYVKRLAAAQGIDALNLIKSPETMA 478
>gi|37956836|gb|AAP34103.1| gene 8 [Enterobacteria phage T7]
gi|37956889|gb|AAP34155.1| gene 8 [Enterobacteria phage T7]
Length = 536
Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats.
Identities = 89/551 (16%), Positives = 157/551 (28%), Gaps = 75/551 (13%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----KNNAQLRM---WDTTGSE 52
+ + AK + + LKN R + + P +NA W G+
Sbjct: 8 LAEDGAKSV---YERLKNDRAPYETRAQNCAQYTIPSLFPKDSDNASTDYQTPWQAVGAR 64
Query: 53 ACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRE 112
L+S L + P Q W L S + L D +K V E V + + E
Sbjct: 65 GLNNLASKLMLALF-PMQTWMRLTISEYEAKQLLSDPDGLAK-VDEGLSMVERIIMNYIE 122
Query: 113 RSRSGFVGC-LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNV 171
S L +V G Y+ + LS+ + +
Sbjct: 123 ---SNSYRVTLFEALKQLVVAGNVLLYLPEPEGSNYNPMKL----YRLSSYVVQRDAFGN 175
Query: 172 VDSVYREFTF-TVDQIVSKWGDKVLSSKMKSALA-----RNENERFTIIHAVYPKSLTDK 225
V T DQI +G L ++ A+ + +E + +Y + +
Sbjct: 176 V------LQMVTRDQIA--FG--ALPEDIRKAVEGQGGEKKADETIDVYTHIYLDEDSGE 225
Query: 226 KKDKGNKGFHSKFVSVDENRF-FEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
+ V++ + PYI R E YGRS E L +
Sbjct: 226 YLR---------YEEVEDMEVQGSDGTYPKEACPYIPIRMVRLDGESYGRSYIEEYLGDL 276
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
R L + + +S + + L R F ++
Sbjct: 277 RSLENLQEAIVKMSMISSKVIGLVNPAGITQPRRLTKAQTGDFVTGRPEDISFLQLEKQA 336
Query: 343 PLPYHEELNR-LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
+ ++ ++ + F+L+ V +A E E +G + L E
Sbjct: 337 DFTVAKAVSDAIEARLSFAFMLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQE 395
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
++ L L + +PE P +E + + + + V
Sbjct: 396 LQLPLVRVLLKQLQATQQIPELPKEAVEPTISTGLEAIG------RGQDLDKLERCVTAW 449
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQH 521
L DP ++ + A I T E ++Q
Sbjct: 450 AALAPMRNDPD----INLAMIKLRIANAIGIDTSGILLTEE--------------QKQQK 491
Query: 522 LQQQLQQTSQD 532
+ QQ Q D
Sbjct: 492 MAQQSMQMGMD 502
>gi|194100395|ref|YP_002003970.1| gp8 [Enterobacteria phage 13a]
gi|193201442|gb|ACF15919.1| gp8 [Enterobacteria phage 13a]
Length = 536
Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats.
Identities = 89/551 (16%), Positives = 156/551 (28%), Gaps = 75/551 (13%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----KNNAQLRM---WDTTGSE 52
+ + AK + + LKN R + + P +NA W G+
Sbjct: 8 LAEEGAKSV---YERLKNDRAPYETRAQNCAQYTIPSLFPKDSDNASTDYVTPWQAVGAR 64
Query: 53 ACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRE 112
L+S L + P Q W L S + L D +K V E V + + E
Sbjct: 65 GLNNLASKLMLALF-PMQTWMRLTISEYEAKQLLSDPDGLAK-VDEGLSMVERIIMNYIE 122
Query: 113 RSRSGFVGC-LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNV 171
S L +V G Y+ + LS+ + +
Sbjct: 123 ---SNSYRVTLFEALKQLVVAGNVLLYLPEPEGSNYNPMKL----YRLSSYVVQRDAFGN 175
Query: 172 VDSVYREFTF-TVDQIVSKWGDKVLSSKMKSALA-----RNENERFTIIHAVYPKSLTDK 225
V T DQI +G L ++ A+ + +E + +Y + +
Sbjct: 176 V------LQMVTRDQIA--FG--ALPEDIRKAVEGQGGEKKADETIDVYTHIYLDEDSGE 225
Query: 226 KKDKGNKGFHSKFVSVDENRF-FEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
+ V+ + PYI R E YGRS E L +
Sbjct: 226 YIR---------YEEVEGMEVQGSDGTYPKEACPYIPIRMVRLDGESYGRSYIEEYLGDL 276
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
R L + + +S + + L R F ++
Sbjct: 277 RSLENLQEAIVKMSMISSKVIGLVNPAGITQPRRLTKAQTGDFVTGRPEDISFLQLEKQA 336
Query: 343 PLPYHEELNR-LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
+ ++ ++ + F+L+ V +A E E +G + L E
Sbjct: 337 DFTVAKAVSDAIEARLSFAFMLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQE 395
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
++ L L + +PE P +E + + + + V
Sbjct: 396 LQLPLVRVLLKQLQATQQIPELPKEAVEPTISTGLEAIG------RGQDLDKLERCVAAW 449
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQH 521
L DP ++ + A I T E ++Q
Sbjct: 450 AALAPMRDDPD----INLAMIKLRIANAIGIDTSGILLTEE--------------QKQQK 491
Query: 522 LQQQLQQTSQD 532
+ QQ Q D
Sbjct: 492 MAQQSMQMGMD 502
>gi|9627467|ref|NP_041995.1| head-tail connector protein [Enterobacteria phage T7]
gi|138414|sp|P03728|VHTJ_BPT7 RecName: Full=Head-to-tail joining protein
gi|15602|emb|CAA24425.1| unnamed protein product [Enterobacteria phage T7]
gi|37956678|gb|AAP33948.1| gene 8 [Enterobacteria phage T7]
gi|265524999|gb|ACY75862.1| head-to-tail joining protein [Enterobacteria phage T7]
Length = 536
Score = 108 bits (269), Expect = 4e-21, Method: Composition-based stats.
Identities = 89/551 (16%), Positives = 156/551 (28%), Gaps = 75/551 (13%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----KNNAQLRM---WDTTGSE 52
+ + AK + + LKN R + + P +NA W G+
Sbjct: 8 LAEDGAKSV---YERLKNDRAPYETRAQNCAQYTIPSLFPKDSDNASTDYQTPWQAVGAR 64
Query: 53 ACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRE 112
L+S L + P Q W L S + L D +K V E V + + E
Sbjct: 65 GLNNLASKLMLALF-PMQTWMRLTISEYEAKQLLSDPDGLAK-VDEGLSMVERIIMNYIE 122
Query: 113 RSRSGFVGC-LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNV 171
S L +V G Y+ + LS+ + +
Sbjct: 123 ---SNSYRVTLFEALKQLVVAGNVLLYLPEPEGSNYNPMKL----YRLSSYVVQRDAFGN 175
Query: 172 VDSVYREFTF-TVDQIVSKWGDKVLSSKMKSALA-----RNENERFTIIHAVYPKSLTDK 225
V T DQI +G L ++ A+ + +E + +Y + +
Sbjct: 176 V------LQMVTRDQIA--FG--ALPEDIRKAVEGQGGEKKADETIDVYTHIYLDEDSGE 225
Query: 226 KKDKGNKGFHSKFVSVDENRF-FEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
+ V+ + PYI R E YGRS E L +
Sbjct: 226 YLR---------YEEVEGMEVQGSDGTYPKEACPYIPIRMVRLDGESYGRSYIEEYLGDL 276
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
R L + + +S + + L R F ++
Sbjct: 277 RSLENLQEAIVKMSMISSKVIGLVNPAGITQPRRLTKAQTGDFVTGRPEDISFLQLEKQA 336
Query: 343 PLPYHEELNR-LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
+ ++ ++ + F+L+ V +A E E +G + L E
Sbjct: 337 DFTVAKAVSDAIEARLSFAFMLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQE 395
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
++ L L + +PE P +E + + + + V
Sbjct: 396 LQLPLVRVLLKQLQATQQIPELPKEAVEPTISTGLEAIG------RGQDLDKLERCVTAW 449
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQH 521
L DP ++ + A I T E ++Q
Sbjct: 450 AALAPMRDDPD----INLAMIKLRIANAIGIDTSGILLTEE--------------QKQQK 491
Query: 522 LQQQLQQTSQD 532
+ QQ Q D
Sbjct: 492 MAQQSMQMGMD 502
>gi|148724480|ref|YP_001285446.1| head to tail connector [Cyanophage Syn5]
gi|145588125|gb|ABP87944.1| head to tail connector [Synechococcus phage Syn5]
Length = 542
Score = 107 bits (267), Expect = 5e-21, Method: Composition-based stats.
Identities = 77/544 (14%), Positives = 165/544 (30%), Gaps = 42/544 (7%)
Query: 8 DIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSS 59
Q R++ ++ R + PY + + + GS+ LSS
Sbjct: 4 LAQARYSAMRADREDFLDMARRCAALTLPYLLTEDGHASGGRLQQPYQSLGSKGVNALSS 63
Query: 60 LLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFV 119
L + P + L + + + ++ ++ + S
Sbjct: 64 KLMLSLFPIQTSFFKLQINDAEIASVPELTPEVRSEIDMNLSKMEKMVMQQIAESSDR-- 121
Query: 120 GCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREF 179
L + ++ TG + A + PL + + V +
Sbjct: 122 VQLTAAMKHLIV--TGNVLVFAGKKTLKV--------YPLDRYVIERDGDGNVIEIITRE 171
Query: 180 TFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDK----KKDKGNKGFH 235
+ +++ + L S + +F + ++ + K G +H
Sbjct: 172 LVDRSLLPAEFQKQSLLEGKDSNAVGEDGPKFGVAQGKGGRNDAEVFTCCKLVDGQHRWH 231
Query: 236 SKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQF 295
+ + + P++ R+ V E YGR E + L+ L +
Sbjct: 232 QECDGKEIKGSRSSSPLKHSPWLPLRFNVVDGESYGRGRVEEFFGDLSSLDALTRSLIEG 291
Query: 296 GRLSLHPPTIAVSEAKQRNFDL-KPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLK 354
+ + A + L + G I E S+ Q + + E + L
Sbjct: 292 SAAAAKVVFMVSPSATTKPQSLARAGTGAIIQGRAEDVSVVQANKGADFRTVQEMIRDLS 351
Query: 355 ESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDIL 414
+ I F L + +A E E E + + G L E + ++R+L ++
Sbjct: 352 QRISDAF---LILNVRQSERTTATEVREVQMELDRQLSGIYGSLTVELLTPYLNRKLHLM 408
Query: 415 DSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCM 474
LP P + L + E A+ ++ + TV + P +
Sbjct: 409 QRSKQLPSLPKGLVMPT------VVAGLGGVGRGEDRAALIEFMQTVGQ----AMGPEAL 458
Query: 475 DH-MDTDRVSRFSLWATNTPA-VLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQD 532
+D + A+ L++ + + + ++ Q++ M + Q Q
Sbjct: 459 QQFIDPTEFLKRLAAASGIDTLNLVKSPETMAN--EAQQAQQQQMTASLMGQAGQLAKSP 516
Query: 533 IGAK 536
IG K
Sbjct: 517 IGEK 520
>gi|37956731|gb|AAP34000.1| gene 8 [Enterobacteria phage T7]
gi|37956781|gb|AAP34049.1| gene 8 [Enterobacteria phage T7]
Length = 536
Score = 107 bits (267), Expect = 5e-21, Method: Composition-based stats.
Identities = 89/551 (16%), Positives = 156/551 (28%), Gaps = 75/551 (13%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----KNNAQLRM---WDTTGSE 52
+ + AK + + LKN R + + P +NA W G+
Sbjct: 8 LAEDGAKSV---YERLKNDRAPYETRAQNCAQYTIPSLFPKDSDNASTDYQTPWQAVGAR 64
Query: 53 ACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRE 112
L+S L + P Q W L S + L D +K V E V + + E
Sbjct: 65 GLNNLASKLMLALF-PMQTWMRLTISEYEAKQLLSDPDGLAK-VDEGLSMVERIIMNYIE 122
Query: 113 RSRSGFVGC-LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNV 171
S L +V G Y+ + LS+ + +
Sbjct: 123 ---SNSYRVTLFEALKQLVVAGNVLLYLPEPEGSNYNPMKL----YRLSSYVVQRDAFGN 175
Query: 172 VDSVYREFTF-TVDQIVSKWGDKVLSSKMKSALA-----RNENERFTIIHAVYPKSLTDK 225
V T DQI +G L ++ A+ + +E + +Y + +
Sbjct: 176 V------LQMVTRDQIA--FG--ALPEDIRKAVEGQGGEKKADETIDVYTHIYLDEDSGE 225
Query: 226 KKDKGNKGFHSKFVSVDENRF-FEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
+ V+ + PYI R E YGRS E L +
Sbjct: 226 YLR---------YEEVEGMEVQGSDGTYPKEACPYIPIRMVRLDGESYGRSYIEEYLGDL 276
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
R L + + +S + + L R F ++
Sbjct: 277 RSLENLQEAIVKMSMISSKVIGLVNPAGITQPRRLTKAQTGDFVTGRPEDISFLQLEKQA 336
Query: 343 PLPYHEELNR-LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
+ ++ ++ + F+L+ V +A E E +G + L E
Sbjct: 337 DFTVAKAVSDAIEARLSFAFMLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQE 395
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
++ L L + +PE P +E + + + + V
Sbjct: 396 LQLPLVRVLLKQLQATQQIPELPKEAVEPTISTGLEAIG------RGQDLDKLERCVTAW 449
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQH 521
L DP ++ + A I T E ++Q
Sbjct: 450 AALAPMRDDPD----INLAMIKLRIANAIGIDTSGILLTEE--------------QKQQK 491
Query: 522 LQQQLQQTSQD 532
+ QQ Q D
Sbjct: 492 MVQQSMQMGMD 502
>gi|30387485|ref|NP_848294.1| head-to-tail joining protein [Yersinia pestis phage phiA1122]
gi|30314122|gb|AAP20530.1| head-to-tail joining protein [Yersinia pestis phage phiA1122]
Length = 536
Score = 106 bits (265), Expect = 8e-21, Method: Composition-based stats.
Identities = 89/551 (16%), Positives = 156/551 (28%), Gaps = 75/551 (13%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY-----KNNAQLRM---WDTTGSE 52
+ + AK + + LKN R + + P +NA W G+
Sbjct: 8 LAEDGAKSV---YERLKNDRAPYETRAQNCAQYTIPSLFPKDSDNASTDYQTPWQAVGAR 64
Query: 53 ACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRE 112
L+S L + P Q W L S + L D +K V E V + + E
Sbjct: 65 GLNNLASKLMLALF-PMQTWMRLTISEYEAKQLLSDPDGLAK-VDEGLSMVERIIMNYIE 122
Query: 113 RSRSGFVGC-LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNV 171
S L +V G Y+ + LS+ + +
Sbjct: 123 ---SNSYRVTLFEALKQLVVAGNVLLYLPEPEGSNYNPMKL----YRLSSYVVQRDAFGN 175
Query: 172 VDSVYREFTF-TVDQIVSKWGDKVLSSKMKSALA-----RNENERFTIIHAVYPKSLTDK 225
V T DQI +G L ++ A+ + +E + +Y + +
Sbjct: 176 V------LQMVTRDQIA--FG--ALPEDIRKAVEGQGGEKKADETIDVYTHIYLDEASGE 225
Query: 226 KKDKGNKGFHSKFVSVDENRF-FEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTI 282
+ V+ + PYI R E YGRS E L +
Sbjct: 226 YLR---------YEEVEGMEVQGSDGTYPKEACPYIPIRMVRLDGESYGRSYIEEYLGDL 276
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
R L + + +S + + L R F ++
Sbjct: 277 RSLENLQEAIVKMSMISSKVIGLVNPAGITQPRRLTKAQTGDFVTGRPEDISFLQLEKQA 336
Query: 343 PLPYHEELNR-LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
+ ++ ++ + F+L+ V +A E E +G + L E
Sbjct: 337 DFTVAKAVSDAIEARLSFAFMLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQE 395
Query: 402 FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTV 461
++ L L + +PE P +E + + + + V
Sbjct: 396 LQLPLVRVLLKQLQATQQIPELPKEAVEPTISTGLEAIG------RGQDLDKLERCVTAW 449
Query: 462 VELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQH 521
L DP ++ + A I T E ++Q
Sbjct: 450 AALAPMRDDPD----INLAMIKLRIANAIGIDTSGILLTEE--------------QKQQK 491
Query: 522 LQQQLQQTSQD 532
+ QQ Q D
Sbjct: 492 MAQQSMQMGMD 502
>gi|77118196|ref|YP_338118.1| head to tail connector [Enterobacteria phage K1F]
gi|72527940|gb|AAZ72992.1| head to tail connector [Enterobacteria phage K1F]
gi|83308148|emb|CAJ29381.1| gp8 protein [Enterobacteria phage K1F]
Length = 522
Score = 106 bits (265), Expect = 9e-21, Method: Composition-based stats.
Identities = 92/562 (16%), Positives = 170/562 (30%), Gaps = 64/562 (11%)
Query: 1 MNQR---SAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTT 49
M +R +A+ + ++ LKN R + P + W
Sbjct: 1 MAEREGFAAEGAKAVYDRLKNGRQPYETRAQNCAAVTIPSLFPKESDNSSTEYTTPWQAV 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ L++ L + P W L S + +A ++ V E V L
Sbjct: 61 GARCLNNLAAKLMLALFPQS-PWMRLTVSEYEAKTLSQDSEAAAR-VDEGLAMVERVLMA 118
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+ E + F L ++ G Y+ E+G +R L + + +
Sbjct: 119 YMETNS--FRVPLFEALKQLIVSGNCLLYIPE--PEQGTYSPMR--MYRLVSYVVQRDAF 172
Query: 170 NVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDK 229
+ + + K L +KS L ++ E T + D +
Sbjct: 173 GNILQIV---------TIDKVAFSALPEDVKSQLNADDYEPDTELEVYTHIYRQDDE--- 220
Query: 230 GNKGFHSKFVSVDENRFFEEKQIAT------FPYIVGRYRVRADEIYGRSPAMEALPTIR 283
++ +E E PYI R E YGRS E L +
Sbjct: 221 --------YLRYEEVEGIEVTGTDGSYPLTACPYIPVRMVRLDGEDYGRSYCEEYLGDLN 272
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNP 343
L + + +++ + + L R F + G
Sbjct: 273 SLETITEAITKMAKVASKVVGLVNPNGITQPRRLNKAATGEFVAGRVEDINFLQLTKGQD 332
Query: 344 LPYHEELNR-LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEF 402
+ + +++ + FLL+ V + +A E E A +G + E
Sbjct: 333 FTIAKSVADAIEQRLGWAFLLN-SAVQRNAERVTAEEIRYVAGELEATLGGVYSVQSQEL 391
Query: 403 IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVV 462
++ ++ L S G +P+ P +E L + Q E + Q VN +
Sbjct: 392 QLPIVRVLMNQLQSAGMIPDLPKEAVEPTVSTGLE---ALGRGQDLEKLT---QAVNMMT 445
Query: 463 ELGVKTGDPSCMDHMDTDRVSRFSLWATNTP-AVLIRDTAEVEDIRQQREVQRRVMEEQH 521
L + DP ++ + L A A L+ E + + +Q
Sbjct: 446 GLQPLSQDPD----INLPTLKLRLLNALGIDTAGLLLTQDE------KIQRMAEQSSQQA 495
Query: 522 LQQQLQQTSQDIGAKAAGRAME 543
+ Q ++GA A E
Sbjct: 496 VVQGASAAGANMGAAVGQGAGE 517
>gi|194473831|ref|YP_002048655.1| head-to-tail joining protein [Morganella phage MmP1]
gi|194307052|gb|ACF42034.1| head-to-tail joining protein [Morganella phage MmP1]
Length = 543
Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats.
Identities = 77/558 (13%), Positives = 166/558 (29%), Gaps = 69/558 (12%)
Query: 10 QDRFNYLKNQRGELNYWMEELTGFLYPY-----KNNAQLRM---WDTTGSEACIKLSSLL 61
+ ++ LKN R E + P +NA W + G+ L+S L
Sbjct: 17 KAAYDRLKNDRAPYETRAENCAKYTIPSLFPKSSDNASTDYTTPWQSAGARGLNNLASKL 76
Query: 62 SSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGC 121
+ P Q W L S + + + E+ +K V V + + E + +
Sbjct: 77 MLALF-PMQTWMKLTISEFSAKELVGNEEGLAK-VDAALSMVERIIMNYIETNS--YRVA 132
Query: 122 LQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTF 181
L ++ G Y+ + I+ +P + + V
Sbjct: 133 LFEGLKQLIVAGNVLLYLPPPEESDEGYNPIKVYKLP--SFVCQRDSFGNV--------- 181
Query: 182 TVDQIVSK----WGDKVLSSKMKSALA-----RNENERFTIIHAVYPKSLTDKKKDKGNK 232
QIV++ +G L ++ + + +E T+ +Y + +
Sbjct: 182 --LQIVTEDKIAFG--ALDEDIRKMVEASGGEKKPDEEITVYTHIYLDDESGQYL----- 232
Query: 233 GFHSKFVSVDENRFFEEKQ------IATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLN 286
K+ V+ PYI R + E YGRS E L ++ L
Sbjct: 233 ----KYEEVEGEEI---AGTDAAYPYEANPYIPVRMVRLSGESYGRSYCEEYLGDLKSLE 285
Query: 287 ETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPY 346
+ + ++ + + + + F ++
Sbjct: 286 NLHEAMVKMSMIAAKVVGLVNPAGMTQIRQVSKADTGDYVPGKPEDIHFLQLEKQADFSV 345
Query: 347 HEELNR-LKESIRSLFLLDLFQVLDDKASR-SAAESMEKTREKGAFVGPLIGGLQSEFIG 404
+ + ++ + F+L+ + A R +A E E +G + L E
Sbjct: 346 AKTIADNIEARLSFAFMLN--SAVQRTAERVTAEEIRYVASELEDTLGGVYSNLSQELQL 403
Query: 405 AMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVEL 464
++ L+ L + +PE P +E + + + + + L
Sbjct: 404 PIVKVLLNQLQATAKIPELPQEAVEPAISTGLEAIG------RGQDLDRLERCIAAWAAL 457
Query: 465 GVKTGDPSCMDHMDTDRVSRFSLWATNTP-AVLIRDTAEVEDIRQQREVQRRVMEEQHLQ 523
DP ++ + A A ++ + + + +Q+ +M +
Sbjct: 458 APMANDPD----INLSTIKLRIANAIGIDTAGILLTEEQKQQKLAEAAMQQGMMTGANQL 513
Query: 524 QQLQQTSQDIGAKAAGRA 541
+A +A
Sbjct: 514 GGGMAGMATESPEALAQA 531
>gi|68299738|ref|YP_249587.1| Head-to-tail joining protein [Vibriophage VP4]
gi|66473277|gb|AAY46286.1| head-to-tail joining protein [Vibriophage VP4]
Length = 532
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 80/512 (15%), Positives = 155/512 (30%), Gaps = 55/512 (10%)
Query: 13 FNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSSLLSSL 64
+N LKN RG E+ + P + + W + G+ L+S L
Sbjct: 18 YNRLKNDRGAYETRAEDCATYTIPSVFPSATADGSTSYTTPWQSIGARGLNNLASKLMLA 77
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQS 124
+ P G + L S + + ++ V + E + F L +
Sbjct: 78 LFPVGSSFFKLNVSELEVKQSITS-PEELTEIATGLAMVERICMNYMESNS--FRPTLHA 134
Query: 125 FYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVD 184
++ G Y+ + +G + L N + + + V
Sbjct: 135 AIKQLLVAGNVLLYIPSTEQVEGQSNAPKL--YKLHNFVVERDAYDNV-----------L 181
Query: 185 QIV--SKWGDKVLSSKMKSALAR-----NENERFTIIHAVYPKSLTDKKKDKGNKGFHSK 237
QIV K L ++ +L N +E TI VY +D F S
Sbjct: 182 QIVTEDKIARAALPEDVRKSLEDAQGDQNPSEEVTIYTHVY--------RDPEAMVFRSY 233
Query: 238 FVSVDENRFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQF 295
E E + + P+I R +E YGRS E L ++ L + +
Sbjct: 234 QEIDGEIVAGTEGEYPLDSCPWIPVRLIKMPNEDYGRSFVEEYLGDLKSLENLYEAIVKM 293
Query: 296 GRLSLHPPTIA-VSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLK 354
+S + Q K + A ++ +FQ ++ + + ++
Sbjct: 294 SMISSKVLFFVNPNGVTQIRRVAKANTGDFVAGRKQDVEVFQLEKYNDFQVAKATADDIE 353
Query: 355 ESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDIL 414
+ + F+L+ V +A E E +G + L E ++ L L
Sbjct: 354 KRLSYAFMLN-SAVQRGGDRVTAEEIRYVAGELEDTLGGVYSLLSQELQLPLVKILLKEL 412
Query: 415 DSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCM 474
+ +P P +E + + ++ +++L
Sbjct: 413 QATSKIPNLPKEAVEPAIATGLEALG------RGHDLNKLNVFIDYMIKLAGLQD----- 461
Query: 475 DHMDTDRVSRFSLWATNTPAV-LIRDTAEVED 505
D ++ V + LI + +
Sbjct: 462 DDINLLDVKMRLANSLGMDTTGLILTQQDKQA 493
>gi|281416195|ref|YP_003347930.1| head-to-tail joining protein [Vibrio phage N4]
gi|325171309|ref|YP_004251280.1| head-to-tail joining protein [Vibrio phage ICP3]
gi|237701502|gb|ACR16495.1| head-to-tail joining protein [Vibrio phage N4]
gi|323512015|gb|ADX87477.1| head-to-tail joining protein [Vibrio phage ICP3]
gi|323512160|gb|ADX87619.1| head-to-tail joining protein [Vibrio phage ICP3_2008_A]
gi|323512208|gb|ADX87666.1| head-to-tail joining protein [Vibrio phage ICP3_2007_A]
Length = 532
Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats.
Identities = 80/512 (15%), Positives = 155/512 (30%), Gaps = 55/512 (10%)
Query: 13 FNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSSLLSSL 64
+N LKN RG E+ + P + + W + G+ L+S L
Sbjct: 18 YNRLKNDRGAYETRAEDCATYTIPSVFPSATADGSTSYTTPWQSIGARGLNNLASKLMLA 77
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQS 124
+ P G + L S + + ++ V + E + F L +
Sbjct: 78 LFPVGSSFFKLNVSELEVKQSITS-PEELTEIATGLAMVERICMNYMESNS--FRPTLHA 134
Query: 125 FYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVD 184
++ G Y+ + +G + L N + + + V
Sbjct: 135 AIKQLLVAGNVLLYIPSTEQVEGQSNAPKL--YKLHNFVVERDAYDNV-----------L 181
Query: 185 QIV--SKWGDKVLSSKMKSALAR-----NENERFTIIHAVYPKSLTDKKKDKGNKGFHSK 237
QIV K L ++ +L N +E TI VY +D F S
Sbjct: 182 QIVTEDKIARAALPEDVRKSLEEAQGDQNPSEEVTIYTHVY--------RDPEAMVFRSY 233
Query: 238 FVSVDENRFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQF 295
E E + + P+I R +E YGRS E L ++ L + +
Sbjct: 234 QEIDGEIVAGTEGEYPLDSCPWIPVRLIKMPNEDYGRSFVEEYLGDLKSLENLYEAIVKM 293
Query: 296 GRLSLHPPTIA-VSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLK 354
+S + Q K + A ++ +FQ ++ + + ++
Sbjct: 294 SMISSKVLFFVNPNGVTQIRRVAKANTGDFVAGRKQDVEVFQLEKYNDFQVAKATADDIE 353
Query: 355 ESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDIL 414
+ + F+L+ V +A E E +G + L E ++ L L
Sbjct: 354 KRLSYAFMLN-SAVQRGGDRVTAEEIRYVAGELEDTLGGVYSLLSQELQLPLVKILLKEL 412
Query: 415 DSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCM 474
+ +P P +E + + ++ +++L
Sbjct: 413 QATSKIPNLPKEAVEPAIATGLEALG------RGHDLNKLNVFIDYMIKLAGLQD----- 461
Query: 475 DHMDTDRVSRFSLWATNTPAV-LIRDTAEVED 505
D ++ V + LI + +
Sbjct: 462 DDINLLDVKMRLANSLGMDTTGLILTQQDKQA 493
>gi|323512062|gb|ADX87523.1| head-to-tail joining protein [Vibrio phage ICP3_2009_B]
gi|323512111|gb|ADX87571.1| head-to-tail joining protein [Vibrio phage ICP3_2009_A]
Length = 532
Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats.
Identities = 80/512 (15%), Positives = 155/512 (30%), Gaps = 55/512 (10%)
Query: 13 FNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSSLLSSL 64
+N LKN RG E+ + P + + W + G+ L+S L
Sbjct: 18 YNRLKNDRGAYETRAEDCATYTIPSVFPSATADGSTSYTTPWQSIGARGLNNLASKLMLA 77
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQS 124
+ P G + L S + + ++ V + E + F L +
Sbjct: 78 LFPVGSSFFKLNVSELEVKQSITS-PEELTEIATGLAMVERICMNYMESNS--FRPTLHA 134
Query: 125 FYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVD 184
++ G Y+ + +G + L N + + + V
Sbjct: 135 AIKQLLVAGNVLLYIPSTEQVEGQSNAPKL--YKLHNFVVERDAYDNV-----------L 181
Query: 185 QIV--SKWGDKVLSSKMKSALAR-----NENERFTIIHAVYPKSLTDKKKDKGNKGFHSK 237
QIV K L ++ +L N +E TI VY +D F S
Sbjct: 182 QIVTEDKIARAALPEDVRKSLEEAQGDQNPSEEVTIYTHVY--------RDPEAMVFRSY 233
Query: 238 FVSVDENRFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQF 295
E E + + P+I R +E YGRS E L ++ L + +
Sbjct: 234 QEIDGEIVAGTEGEYPLDSCPWIPVRLIKMPNEDYGRSFVEEYLGDLKSLENLYEAIVKM 293
Query: 296 GRLSLHPPTIA-VSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLK 354
+S + Q K + A ++ +FQ ++ + + ++
Sbjct: 294 SMISSKVLFFVNPNGVTQIRRVAKANTGDFVAGRKQDVEVFQLEKYNDFQVAKATADDIE 353
Query: 355 ESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDIL 414
+ + F+L+ V +A E E +G + L E ++ L L
Sbjct: 354 KRLSYAFMLN-SAVQRGGDRVTAEEIRYVAGELEDTLGGVYSLLSQELQLPLVKILLKEL 412
Query: 415 DSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCM 474
+ +P P +E + + ++ +++L
Sbjct: 413 QATSKIPNLPKEAVEPAIATGLEALG------RGHDLNKLNVFIDYMIKLAGLQD----- 461
Query: 475 DHMDTDRVSRFSLWATNTPAV-LIRDTAEVED 505
D ++ V + LI + +
Sbjct: 462 DDINLLDVKMRLANSLGMDTTGLILTQQDKQA 493
>gi|194100340|ref|YP_002003770.1| gp8 [Enterobacteria phage EcoDS1]
gi|193201335|gb|ACF15814.1| gp8 [Enterobacteria phage EcoDS1]
Length = 522
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 93/564 (16%), Positives = 169/564 (29%), Gaps = 68/564 (12%)
Query: 1 MNQR---SAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTT 49
M +R +A+ + ++ LKN R + P + W +
Sbjct: 1 MAEREGFAAEGAKAVYDRLKNGRQPYETRAQNCAAVTIPSLFPKESDNSSTEYTTPWQSV 60
Query: 50 GSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFG 109
G+ L++ L + P W L S + +A ++ V E V L
Sbjct: 61 GARCLNNLAAKLMLALFPQS-PWMRLTVSEYEAKTLSQDSEAAAR-VDEGLAMVERVLMA 118
Query: 110 FRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQ 169
+ E + F L ++ G Y+ E+G +R L + + +
Sbjct: 119 YMETNS--FRVPLFEALKQLIVSGNCLLYIPE--PEQGTYSPMR--MYRLVSYVVQRDAF 172
Query: 170 NVVDSVYREFTFTVDQIV--SKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKK 227
+ QIV K L +KS L ++ E T + D +
Sbjct: 173 GNI-----------LQIVTLDKVAFSALPEDVKSQLNTDDYEPDTELEVYTHIYRQDDE- 220
Query: 228 DKGNKGFHSKFVSVDENRFFEEKQIAT------FPYIVGRYRVRADEIYGRSPAMEALPT 281
++ +E E PYI R E YGRS E L
Sbjct: 221 ----------YLRYEEVEGIEVTGTDGSYPLTACPYIPVRMVRLDGEDYGRSYCEEYLGD 270
Query: 282 IRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG 341
+ L + + +++ + + L R F + G
Sbjct: 271 LNSLETITEAITKMAKVASKVVGLVNPNGITQPRRLNKAATGEFVAGRVEDINFLQLTKG 330
Query: 342 NPLPYHEELNR-LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQS 400
+ + +++ + FLL+ V + +A E E A +G +
Sbjct: 331 QDFTIAKSVADAIEQRLGWAFLLN-SAVQRNAERVTAEEIRYVAGELEATLGGVYSVQSQ 389
Query: 401 EFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNT 460
E ++ ++ L S G +P+ P +E L + Q E + Q VN
Sbjct: 390 ELQLPIVRVLMNQLQSAGMIPDLPKEAVEPTVSTGLE---ALGRGQDLEKLT---QAVNM 443
Query: 461 VVELGVKTGDPSCMDHMDTDRVSRFSLWATNTP-AVLIRDTAEVEDIRQQREVQRRVMEE 519
+ L DP ++ + L A A L+ E + + +
Sbjct: 444 MTGLQPLQQDPD----INLPTLKLRLLNALGIDTAGLLLTQDE------KLQRMAEQSAQ 493
Query: 520 QHLQQQLQQTSQDIGAKAAGRAME 543
+ ++GA A E
Sbjct: 494 GAVVNGASAAGANMGAAVGQGAGE 517
>gi|317487284|ref|ZP_07946079.1| hypothetical protein HMPREF0179_03442 [Bilophila wadsworthia 3_1_6]
gi|316921474|gb|EFV42765.1| hypothetical protein HMPREF0179_03442 [Bilophila wadsworthia 3_1_6]
Length = 554
Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats.
Identities = 79/560 (14%), Positives = 168/560 (30%), Gaps = 65/560 (11%)
Query: 10 QDRFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSSLL 61
+ R+ L R PY + ++ + G+ L+S L
Sbjct: 21 ETRYTELSQDRAPYLDRARRCAELTIPYLIPPDDLAQGQELPSLYQSVGANGVTNLASKL 80
Query: 62 SSLITPPGQKWHGLAESFSAYQAFLYKEDARSK-KVREWCDQVTDTLFGFRERSRSGFVG 120
+ PP + L + + D + K+ + ++ + + SG
Sbjct: 81 LLTMLPPNEPCFRLRVNNLVVEREEENADKEFRTKIEKALSRIEQAVLA--DIEASGDRP 138
Query: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
+ ++ G + D +KGL PLS + + + E T
Sbjct: 139 VVAEGNQHLIVAGN---VLYHDDPKKGLRL------FPLSRYVVERDPMGTPVEIVVEET 189
Query: 181 FTVDQIVSKWGDKVLSSKMKSALAR------NENERFTIIHAVYPKSLTDKKKDKGNKGF 234
+D + + ++ +++ A ++R + +Y KK
Sbjct: 190 VNLDTL-----PEDVAERIREAADTLGQPSIKGDDRKDVN--IYTHLKRGPKK------- 235
Query: 235 HSKFVSVDENRF-FEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNE 291
S + + E P++ R A E YGRS L + L
Sbjct: 236 WSVYQECRGVKLPGSEGSYKLEACPWLPVRMYSIAGENYGRSFVELQLGDLGSLESLCQS 295
Query: 292 LAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPY-HEEL 350
L + +S + L F VQ G ++
Sbjct: 296 LVEGSAVSAKVVGLVNPNGVTDPKALAESANGDMIEGNADDVAFLQVQKGADFQVVAAQI 355
Query: 351 NRLKESIRSLFLLDLFQVLD----DKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAM 406
RL++ +++ F ++D D +A E +E +G + + EF
Sbjct: 356 QRLEQRLKTA-----FLMMDGVRRDAERVTAEEIRVIAQELETGLGGVYTLISQEFQLPY 410
Query: 407 ISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
I+ + + Q +PE P + E A + Q + ++ G
Sbjct: 411 IASRMATMTRQKRIPELPKGTVTPSIVTGFE----------AIGRGNDKQKLLEFLKAGT 460
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEV-EDIRQQREVQRRVMEEQHLQQ 524
+ S + ++ A L++D E+ ++ + ++ + M + L
Sbjct: 461 ELMGESFLGLLNPQNAVTRLASAMGISTEGLVKDEEELAQERQAAQQQAQGQMMMEKLGP 520
Query: 525 QLQQTSQDIGAKAAGRAMEK 544
+ + + A++
Sbjct: 521 EALRQIGGMAQAGNAEALQG 540
>gi|281416306|ref|YP_003347546.1| head-to-tail joining protein [Klebsiella phage KP32]
gi|262410425|gb|ACY66690.1| head-to-tail joining protein [Klebsiella phage KP32]
Length = 461
Score = 100 bits (248), Expect = 8e-19, Method: Composition-based stats.
Identities = 72/474 (15%), Positives = 139/474 (29%), Gaps = 42/474 (8%)
Query: 68 PGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGC-LQSFY 126
P Q W L S + L + +K V E V + + E S L
Sbjct: 6 PMQSWMKLTISEYEAKNLLGDAEGLAK-VDEGLSMVERIIMNYIE---SNSYRVTLFECL 61
Query: 127 TSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVDQI 186
+ G Y+ + + + R L++ + + V + T+D+I
Sbjct: 62 KQLCVAGNALLYL-PEPEGYTPMKLYR-----LNSYVVQRDAFGNVLQIV-----TLDKI 110
Query: 187 V-SKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDENR 245
+ + V S + + E+ + VY D +SK+ V E
Sbjct: 111 AFNALPEDVRSQVEAAQGEQKEDAEIDVYTHVYLNEAGDG---------YSKYEEVAEEV 161
Query: 246 F-FEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHP 302
E + PYI R E YGRS E L ++ L + + ++
Sbjct: 162 VPGSEAEYPLEECPYIPVRMVRIDGESYGRSYVEEYLGDLKSLENLQESIVKMAMITAKV 221
Query: 303 PTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNR-LKESIRSLF 361
+ + L R+ F ++ + ++ ++ + F
Sbjct: 222 IGLVDPAGITQVRRLTAAQSGAFVPGRKQDIEFLQLEKSGDFTVAKNVSDTIEARLSYAF 281
Query: 362 LLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLP 421
+L+ V +A E E +G + L E ++ L L + +P
Sbjct: 282 MLN-SAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPLVRVLLKQLQATQQIP 340
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDR 481
E P +E + + + + + L GD D ++
Sbjct: 341 ELPKEAVEPTISTGLEAIG------RGQDLDKLERCIAAWSALKALEGD----DDLNLAN 390
Query: 482 VSRFSLWATNTP-AVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIG 534
+ A A ++ + + Q+ Q + Q T
Sbjct: 391 LKLRIANAIGLDTAGMLLTQEQKNALMAQQGAQIATQQGAAALGQGIATQATAS 444
>gi|310005791|gb|ADP00177.1| head-tail connector protein [Cyanophage NATL2A-133]
Length = 528
Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 82/556 (14%), Positives = 168/556 (30%), Gaps = 62/556 (11%)
Query: 10 QDRFNYLKNQRGELNYWMEELTGFLYP---YKNNAQLRM------WDTTGSEACIKLSSL 60
+ R+N L R + E P +N W + G++ + LSS
Sbjct: 5 RQRYNKLSTGREQFLNVAYECAELTIPTLIMRNETPPNYAQFKTPWQSIGAKGVVTLSSK 64
Query: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
L + PP + L S + E ++ ++ + S
Sbjct: 65 LMLGLLPPSTSFFKLQLDDSKLGVEVPPE--SKSELDLSFAKIERMIMEAIAASTDR--V 120
Query: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
+ + +V G YM D + PL+ + + + +
Sbjct: 121 QIFTALKHLVVTGNALLYMGKDGMKM----------YPLNRYVVERDGNGDPVEIVTKEK 170
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS 240
+ + + + + ++ I + K K ++ H +
Sbjct: 171 INKELLPKL-PLPLKGDGVVDDEQQGKD--VDIYTCI----KLTPKGWKWHQEVHDIMIP 223
Query: 241 VDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSL 300
E + +K P++ R+ E YGR E L ++ L + L + +
Sbjct: 224 GSEGKAPAKK----CPFLPLRFVTVDGEDYGRGRVEEFLGDLKSLEALMQALVEGSAAAA 279
Query: 301 HPPTIAVSEAKQRNFDL---KPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESI 357
+ + L G + G G + Q + + ++ +N L++ +
Sbjct: 280 KVVFTVSPSSVTKPQTLANAGNGAIIQGRPDDIG--VVQVGKTADFQTAYQLVNTLEKRL 337
Query: 358 RSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQ 417
F L + D +A E E +G L L +EF+ + R++ L
Sbjct: 338 AEAF---LIMNVRDSERTTAEEVRMTQMELEQQLGGLFSLLTTEFLLPYLHRKMHTLTQS 394
Query: 418 GNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDH- 476
+P P V + L + Q + +Q + T+ + T P +
Sbjct: 395 KQIPALPKGLVKPTI---VAGINALGRGQ---DRDALVQFITTIAQ----TMGPEALQRF 444
Query: 477 MDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAK 536
++ D + A +V ++ + E Q+ + QQ G
Sbjct: 445 VNADEAIKRLAAAQGI---------DVLNLVKSMEEQQAEQQAAQQQQMQASLMDQAGQL 495
Query: 537 AAGRAMEKKLTHDMME 552
A M+ + E
Sbjct: 496 AGTPMMDPTKNPEGFE 511
>gi|313892489|ref|ZP_07826078.1| head-to-tail joining protein [Dialister microaerophilus UPII 345-E]
gi|313119068|gb|EFR42271.1| head-to-tail joining protein [Dialister microaerophilus UPII 345-E]
Length = 516
Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 72/506 (14%), Positives = 144/506 (28%), Gaps = 73/506 (14%)
Query: 10 QDRFNYLKNQRGELNYWMEELTGFLYPY-----KNNAQLRM---WDTTGSEACIKLSSLL 61
+ + LK R E + P + + + + G+ L+S L
Sbjct: 14 KAVYERLKQARTPYIERAVECAKYTIPSLFPRDGSTGSTKFETPYQSVGARGVNNLASKL 73
Query: 62 SSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGC 121
+ PP + L+ A Q E ++ + + DQ +
Sbjct: 74 MLALFPPNANYFKLSPGDEAQQ-----ELDQTPQAKAQVDQALMKMESKIVE-----YAE 123
Query: 122 LQSFYTSV-----VEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVY 176
+ ++ V TG + E G++ L+ + + V +
Sbjct: 124 AHQYRVTLAEALKVLIVTGNDLLFLPPKEGGMKL------YKLNTYVLERDALGNVIQIV 177
Query: 177 REFTFTVDQIVSKWGDKVLSSKMKSALARNE-----NERFTIIHAVYPKSLTDKKKDKGN 231
V K L ++K + ++ + + I VY +
Sbjct: 178 ---------AVDKISYVALPDEVKRMVDKSGTTPTTSTQVEIYTHVYLEDDQ-------- 220
Query: 232 KGFHSKFVSVDENRFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETV 289
+ S + E+ P+I R E YGRS E L + L
Sbjct: 221 --YLSYQEYKGQIIPQSEQSYPKDKTPWIPLRMVKVDGESYGRSFVEEYLGDFKSLENLT 278
Query: 290 NELAQFGRLSLHPPTIAVSEAKQRNFDL---KPGYMNIGALSREGRSLFQPVQFGNPLPY 346
+ + ++ + + R L K G G + G Q ++ +
Sbjct: 279 KSIVEASLVAANILFLVNPNGVTRVRHLAKAKSGDFVSGRIEDIG--TLQINKYADLQVV 336
Query: 347 HEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAM 406
+ ++ + F+L+ V +A E E +G + L E +
Sbjct: 337 SSTIEQITARLSYAFMLN-SAVQRQGERVTAEEIRYVASELEDTLGGVYSILSQELQLPL 395
Query: 407 ISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
+ R L L S G LP E P +E + + + + +
Sbjct: 396 VRRLLAQLMSLGQLPALEDGLVEPTITTGLEALG------RGHDLNKLITFMQLI----- 444
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNT 492
+P + + ++ A
Sbjct: 445 -QQNPQQAQAIKWNEMTIMEATALGL 469
>gi|254505325|ref|ZP_05117473.1| hypothetical protein SADFL11_PLAS23 [Labrenzia alexandrii DFL-11]
gi|222436169|gb|EEE42851.1| hypothetical protein SADFL11_PLAS23 [Labrenzia alexandrii DFL-11]
Length = 490
Score = 96.6 bits (239), Expect = 9e-18, Method: Composition-based stats.
Identities = 78/517 (15%), Positives = 166/517 (32%), Gaps = 61/517 (11%)
Query: 7 KDIQDRFNYLKNQRGELNYWMEELTGFLYP-----YKNNAQLRM---WDTTGSEACIKLS 58
K +++R+ L+ +R + P +NA ++ + G+ + L+
Sbjct: 2 KSLKERYQNLQIKREPFLKRARDCAALTIPTLLPPEGHNATSKLPQPYQGLGARCVVTLA 61
Query: 59 SLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREW-CDQVTDTLFGFRERSRSG 117
S + P GQ + GL + L + + E T+ + E+
Sbjct: 62 SRMLVAFIPTGQPFFGLEVP---PELLLQEGLMEAPPDLEKGFALATNLITKEIEKKA-- 116
Query: 118 FVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYR 177
S ++ TG ++ + IR L + + +
Sbjct: 117 -WRKPTSLTLELLV-STG-----NALERYMPDNSIR--VYRLDQYVVVRDLSGNL----- 162
Query: 178 EFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSK 237
+ + V+K L + +S L ++ + I + K
Sbjct: 163 -VELILREKVNK---ASLPEQTQSYLKASQEDDVEIFTCAKRHPDGWEIKQ--------- 209
Query: 238 FVSVDENRFFEEKQIA-TFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFG 296
V+ + T P+ R+ E YGR E + L+ +
Sbjct: 210 --EVEGQIIEGMGGVTPTNPFNPLRWSAVPGEDYGRGKVEEHFSDLTYLDLLSKSMVDGS 267
Query: 297 RLSLHPPTIA---VSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRL 353
++ T+ + + R + ++ + + E L Q +E+ R+
Sbjct: 268 AMATRHITMVRPNAAGSNLRKRFAEAKNGDVISGNPEDVDLKQFANVTGMQIAQQEIARI 327
Query: 354 KESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDI 413
+ + FLL ++ + +A E E + +G + L + + A I +
Sbjct: 328 TQELAQAFLLS-SSMIRNAERVTAQEVRMIAEELESVLGGVYSYLSQDMMSARIEALMTS 386
Query: 414 LDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSC 473
+ + G LP P +L V L + + V + LQ + + P
Sbjct: 387 MMAAGQLPPVLQMTQP---VLTVG-LEALERDKDVMRVQTVLQTLQAL--------PPDF 434
Query: 474 MDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQR 510
+D++D + + + P ++ E + RQQR
Sbjct: 435 LDYLDIPDLLKTFMIGLGLPGK-VKTEQEAQQTRQQR 470
>gi|282857730|ref|ZP_06266939.1| head-to-tail joining protein [Pyramidobacter piscolens W5455]
gi|282584400|gb|EFB89759.1| head-to-tail joining protein [Pyramidobacter piscolens W5455]
Length = 534
Score = 96.6 bits (239), Expect = 1e-17, Method: Composition-based stats.
Identities = 72/504 (14%), Positives = 149/504 (29%), Gaps = 46/504 (9%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTG----FLYPYKNNAQLRM---WDTTGSEA 53
+ + + + RF L R E+ + +L+P ++ + + G+E
Sbjct: 10 LRRSARTTFKARFELLAGIRESYCQRAEQCSALTDPYLFPKDGVTGEKVASPYQSVGAEG 69
Query: 54 CIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRER 113
LSS + ++I PP + L + + + ++ +++ E
Sbjct: 70 VTNLSSRILNIILPPNRPPFRLRVEKNPALPEEKRNWQQIEEGLAQLEKMVCDHIETLE- 128
Query: 114 SRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVD 173
R + + +V ++GIR S L N +S + + V
Sbjct: 129 DRVVIAEAIPH------------LLVTGNVLLHVRKDGIRLHS--LRNYVVSRDPRGNVA 174
Query: 174 SVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKG 233
+ + L S EN+R A Y + T K+ +
Sbjct: 175 EIIVREKVDPRFL-------ALPLAT-STTDAPENDRRPEDKASYKELFTQIKRTENG-- 224
Query: 234 FHSKFVSVDENRFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNE 291
S VD + P++ R + E YGR + L + L
Sbjct: 225 -WSLQQEVDGKFVSKHGHYKKDECPWLPLRMYRVSGESYGRGYVEKYLGDHKSLEALTKA 283
Query: 292 LAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELN 351
+ + + + L+ VQ N + +
Sbjct: 284 IVEGAAACAKVVFLVSPNGTLKAKQLEEAGNLAILTGSAAEVSTVQVQKANDFQIAKAMA 343
Query: 352 R-LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRE 410
L++ + +LL+ + + +A E +E +G L L EF +
Sbjct: 344 DNLQQRLSRAYLLN-SAIQRNAERVTAEEIRYMAQELETALGGLYSMLSMEFQHPYVKLR 402
Query: 411 LDILDSQGNLPECEGADNPPVSLLK-VEYTSPLFKYQQAESVASALQGVNTVVELGVKTG 469
+ + LP+ + +K V L + Q + + V KT
Sbjct: 403 MKYMKEDALLPDLDQQYQEGKVGVKIVTGIDALGRGQ---DASRLTEWAGIVF----KTI 455
Query: 470 DPSC-MDHMDTDRVSRFSLWATNT 492
P + +++ + +
Sbjct: 456 GPQVALPYINASAFMKALANSMGI 479
>gi|325272831|ref|ZP_08139168.1| head-to-tail joining protein [Pseudomonas sp. TJI-51]
gi|324102036|gb|EGB99545.1| head-to-tail joining protein [Pseudomonas sp. TJI-51]
Length = 450
Score = 95.9 bits (237), Expect = 2e-17, Method: Composition-based stats.
Identities = 73/493 (14%), Positives = 156/493 (31%), Gaps = 63/493 (12%)
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQS 124
+ PP + L E + L V+ ++ + E +
Sbjct: 3 LLPPNSPFFRL-EIDEFTEEKLTSNPQMHADVQAGLAKIERAVQTEIETTA--IRVTGFE 59
Query: 125 FYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV-DSVYREFTFTV 183
++ G G Y+ + G+++ PL + + V D V
Sbjct: 60 LLKHLIVGGNGLVYL-------PQQGGMKF--YPLDRYVVRRDPMGNVLDIV-------- 102
Query: 184 DQIVSKWGDKVLSSKMKSALA---------RNENERFTIIHAVYPKSLTDKKKDKGNKGF 234
+ + VL + +S + R+ N+ +I + K T
Sbjct: 103 --VKEEVSLAVLPEEARSLVEPGDDSGDTPRDHNKNVSIYTHITLKGETWN--------- 151
Query: 235 HSKFVSVDENRF-FEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNE 291
+ V ++ R+ E YGRS E L I+ L
Sbjct: 152 --VYQEVKGQIVPGSRGTYPKDKCAWLPIRFVKIDGENYGRSYVEEYLGDIKSLEGLSQA 209
Query: 292 LAQFGRLSLHPPTIAVSEAKQRNFDLK--PGYMNIGALSREGRSLFQPVQFGNPLPYHEE 349
+ + S + + +L P + ++ + ++L Q + G+ E
Sbjct: 210 IVEGSAASAKVLFLVNPNGVTSSSELAEAPNGEFVDGVASDVQAL-QLQKSGDFRVALET 268
Query: 350 LNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISR 409
+N + E + F+L+ + + +A E E A +G + L EF +++R
Sbjct: 269 INTITERLEFAFMLN-SAIQRNGERVTAEEIRYMAGELEAALGGVYSILSQEFQLPLVNR 327
Query: 410 ELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTG 469
+ + + LPE P + +E + + Q ++T++++
Sbjct: 328 IMFSMQRRKKLPELPKGTVSPTIVTGMEALG------RGNDLTKLDQFISTIMQI----- 376
Query: 470 DPSCMDHMDTDRVSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQ 528
P ++ A L++ EV+ +QQ+++Q+ + Q
Sbjct: 377 -PDAASRINWGNYMTRRATALGIDTDGLVKTDQEVQQEQQQQQMQQAMQSGVAPAVQAAG 435
Query: 529 TSQDIGAKAAGRA 541
+ G +A
Sbjct: 436 RMMEKGQPDGSQA 448
>gi|158425212|ref|YP_001526504.1| head-to-tail joining protein [Azorhizobium caulinodans ORS 571]
gi|158332101|dbj|BAF89586.1| head-to-tail joining protein [Azorhizobium caulinodans ORS 571]
Length = 511
Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 75/504 (14%), Positives = 146/504 (28%), Gaps = 53/504 (10%)
Query: 12 RFNYLKNQRGELNYWMEELTGFLYPY--------KNNAQLRMWDTTGSEACIKLSSLLSS 63
R+ L R + P N + G+ L S L
Sbjct: 11 RYTQLATIRSPYLERARDCATLTIPSLMPRAGHGAANDLPTPFQGMGARGVNNLGSKLLL 70
Query: 64 LITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQ 123
+ PP Q + L A Q ++ R +V + Q+ + E
Sbjct: 71 ALMPPNQPFFRLMLDDFALQELTGQDGMR-TEVEKALGQIERAVQTEVETGA--IRVSAF 127
Query: 124 SFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTV 183
++ G Y++ G + R L + + V +
Sbjct: 128 EALKQLLVAGNVLLYVQP----TGGVKVYR-----LDRYVVKRDPSGNVLEIV------- 171
Query: 184 DQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDE 243
I + L +++ L +R + + + + F V
Sbjct: 172 --IHERVSPLALPEELQRKL---GEQRKGVQDTI----DLYTWIRRESGKFV-VHQEVKG 221
Query: 244 NRFFEEKQ---IATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSL 300
+ P+I R+ E YGR E + +R L + + +
Sbjct: 222 EKVPGTDGEWPTDKAPFIALRWAKIDGEDYGRGHVEEYIGDLRSLEALTRAIVEGAAAAA 281
Query: 301 HPPTIAVSEA--KQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIR 358
+ +R P M + + ++E ++ Q +F + E + RL+ +
Sbjct: 282 KVLFLVNPNGVTNERTISEAPN-MAVRSGNKEDVNVLQVEKFNDFRVALETVGRLEIRLS 340
Query: 359 SLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQG 418
FLL + D +A E E +G + L EF ++ R + ++
Sbjct: 341 QAFLLT-SSIQRDAERVTAEEIRVMAGELEDALGGVYSILAQEFQLPLVRRLIFQMEQDE 399
Query: 419 NLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMD 478
LP P L+K + + + + + V +L PS D
Sbjct: 400 RLPSL------PPDLVKPSIITGMEALGRGHDLNRLMMFAKVVNDLLGPGALPSYAD--- 450
Query: 479 TDRVSRFSLWATNTPAVLIRDTAE 502
++ + A + I + E
Sbjct: 451 ARKLIERAGVALSVDTSDILKSDE 474
>gi|291334465|gb|ADD94119.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1161]
gi|291334522|gb|ADD94175.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1201]
gi|291334658|gb|ADD94305.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C695]
gi|291334712|gb|ADD94358.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C890]
gi|291336438|gb|ADD95993.1| hypothetical protein [uncultured organism MedDCM-OCT-S04-C1073]
Length = 86
Score = 90.1 bits (222), Expect = 9e-16, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 406 MISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELG 465
MI R ++ + +++EY SPL K Q++ ++S ++ + + L
Sbjct: 1 MIDRTFALILRKNLFRPAPEFLAGQD--IEIEYVSPLAKAQKSTELSSIMRAIEILGSLS 58
Query: 466 VKTGDPSCMDHMDTDRVSRFSLWATNTPAV 495
DH++ D++ R P
Sbjct: 59 NVA---PVFDHINMDKLVRHLADIVGVPQK 85
>gi|291334262|gb|ADD93925.1| hypothetical protein [uncultured marine bacterium
MedDCM-OCT-S08-C235]
Length = 155
Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Query: 251 QIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEA 310
+ PY+V R+ A E+YGR P + ++P I+ N + + + ++++ +
Sbjct: 41 GEGSNPYVVFRWSKAAGEVYGRGPLLNSMPAIKTCNLVIEMILENAQMAISGMYQMEDDG 100
Query: 311 KQR--NFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLF 361
L PG + + S G + GN L ++++I +
Sbjct: 101 IINVDTIQLLPGTIIPRSPSSRGLEPIK--NAGNFNVADLVLKDMRQNINEHY 151
>gi|33300841|ref|NP_877469.1| head-tail connector protein [Pseudomonas phage phiKMV]
gi|195546675|ref|YP_002117756.1| hypothetical protein PT5_gp34 [Pseudomonas phage PT5]
gi|33284812|emb|CAD44221.1| head-tail connector protein [Enterobacteria phage phiKMV]
gi|158187636|gb|ABW23113.1| conserved hypothetical phage protein [Pseudomonas phage PT5]
Length = 510
Score = 85.8 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/443 (13%), Positives = 129/443 (29%), Gaps = 44/443 (9%)
Query: 46 WDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTD 105
+ + G+ L++ L+ + P G + +E A + D +V +V
Sbjct: 48 FQSAGALLVNNLAAKLARSLFPTGIPFFR-SELTDAIRREADSRDTDITEVTAALARVDR 106
Query: 106 TLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMS 165
++ S + L ++ G Y ++D ++ L + +
Sbjct: 107 KATQRLFQNAS--LAVLTQVIKLLIVTGNALLYRDSDAATV--------VAWSLRSYAVR 156
Query: 166 VNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDK 225
+ + + + + ++ L ++ + +T +
Sbjct: 157 RDATGRWMDIVLKQRYKSKDLDEEYKQD-LMRAGRNLSGSGSVDLYTHVQ---------- 205
Query: 226 KKDKGNKGFHSKFVSVDENRFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIR 283
+K + + +D R +E + PYIV + + E YGR + +
Sbjct: 206 RKKGTAMEYAELYHEIDGVRVGKEGRWPIHLCPYIVPTWNLAPGEHYGRGHVEDYIGDFA 265
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQRNF---------DLKPGYMNIGALSREGRSL 334
+L+ +L + SL V EAK D PG G
Sbjct: 266 KLSLLSEKLGLYELESLEV-LNLVDEAKGAVVDDYQDAEMGDYVPGGAEAVRAYERG--- 321
Query: 335 FQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPL 394
+ + L + + F+ D +A E E +G
Sbjct: 322 ----DYNKMAAIQQSLQAVVVRLNQAFMY--GANQRDAERVTAEEVRITAEEAENTLGGT 375
Query: 395 IGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASA 454
L + L +D L + P + S Q + +
Sbjct: 376 YSLLAENLQSPLAYVCLSEVDDA-LLQGLITKQHKPAIETGLPALSRSAAVQSMLNASQV 434
Query: 455 LQGVNTVVELGVKTGDPSCMDHM 477
+ G+ + +L + P MD +
Sbjct: 435 IAGLAPIAQLDPRISLPKMMDTI 457
>gi|195546737|ref|YP_002117815.1| head-tail connector protein [Pseudomonas phage PT2]
gi|165880746|gb|ABY71001.1| head-tail connector protein [Pseudomonas phage PT2]
Length = 510
Score = 84.7 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 60/443 (13%), Positives = 129/443 (29%), Gaps = 44/443 (9%)
Query: 46 WDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTD 105
+ + G+ L++ L+ + P G + +E A + D +V +V
Sbjct: 48 FQSAGALLVNNLAAKLARSLFPTGIPFFR-SELTDAIRREADSRDTDITEVTAALARVDR 106
Query: 106 TLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMS 165
++ S + L ++ G Y ++ ++ L + +
Sbjct: 107 KATQRLFQNAS--LAVLTQVIKLLIVTGNALLYRDSAAATV--------VAWSLRSYAVR 156
Query: 166 VNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDK 225
+ + + + + ++ L ++ + +T +
Sbjct: 157 RDATGRWMDIVLKQRYKSKDLDEEYKQD-LMRAGRNLSGSGSVDLYTHVQ---------- 205
Query: 226 KKDKGNKGFHSKFVSVDENRFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIR 283
+K+ + + +D R +E + PYIV + + E YGR + +
Sbjct: 206 RKNGTAMEYAELYHEIDGVRVGKEGRWPIHLCPYIVPTWNLAPGEHYGRGHVEDYIGDFA 265
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQRNF---------DLKPGYMNIGALSREGRSL 334
+L+ +L + SL V EAK D PG G
Sbjct: 266 KLSLLSEKLGLYELESLEV-LNLVDEAKGAVVDDYQDAEMGDYVPGGAEAVRAYERG--- 321
Query: 335 FQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPL 394
+ + L + + F+ D +A E E +G
Sbjct: 322 ----DYNKMAAIQQSLQAVVVRLNQAFMY--GANQRDAERVTAEEVRITAEEAENTLGGT 375
Query: 395 IGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASA 454
L + L +D L + P + S Q + +
Sbjct: 376 YSLLAENLQSPLAYVCLSEVDDA-LLQGLITKQHKPAIETGLPALSRSAAVQSMLNASQV 434
Query: 455 LQGVNTVVELGVKTGDPSCMDHM 477
+ G+ + +L + P MD +
Sbjct: 435 IAGLAPIAQLDPRISLPKMMDTI 457
>gi|225626357|ref|YP_002727853.1| putative head-tail connector protein [Pseudomonas phage phikF77]
gi|225594866|emb|CAX63151.1| putative head-tail connector protein [Pseudomonas phage phikF77]
Length = 510
Score = 84.3 bits (207), Expect = 5e-14, Method: Composition-based stats.
Identities = 68/449 (15%), Positives = 128/449 (28%), Gaps = 56/449 (12%)
Query: 46 WDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTD 105
+ + G+ L++ L+ + P G + +E A + D +V +V
Sbjct: 48 FQSAGALLVNNLAAKLARSLFPTGIPFFR-SELTDAIRREADSRDTDITEVTAALARVDR 106
Query: 106 TLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMS 165
++ S + L ++ G Y +D ++ L + +
Sbjct: 107 KATQRLFQNAS--LAVLTQVIKLLIVTGNALLYRNSDEATV--------VAWSLRSYAVR 156
Query: 166 VNHQNV-VDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-----RFTIIHAVYP 219
+ +D V + ++ K L K L R + V
Sbjct: 157 RDATGRWMDIV----------LKQRYKSKDLDEAYKQDLMRAGRNLSGSGSVDLYTHVQ- 205
Query: 220 KSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAME 277
+K + + +D R EE + PYIV + + E YGR +
Sbjct: 206 ------RKKGTAMEYAELYHEIDGVRVGEEGRWPIHLCPYIVPTWNLAPGEHYGRGHVED 259
Query: 278 ALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNF---------DLKPGYMNIGALS 328
+ +L+ +L + SL V EAK D PG
Sbjct: 260 YIGDFAKLSLLSEKLGLYELESLEV-LNLVDEAKGAVVDDYQDAEMGDYVPGGAEAVRAY 318
Query: 329 REGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKG 388
G + + L + + F+ D +A E E
Sbjct: 319 ERG-------DYNKMAAIQQSLQAVVVRLNQAFMY--GANQRDAERVTAEEVRITAEEAE 369
Query: 389 AFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQA 448
+G L + L +D L + P + S Q
Sbjct: 370 NTLGGTYSLLAENLQSPLAYVCLSEVDDA-LLQGLITKQHKPAIETGLPALSRSAAVQSM 428
Query: 449 ESVASALQGVNTVVELGVKTGDPSCMDHM 477
+ + + G+ + +L + P MD +
Sbjct: 429 LNASQVIAGLAPIAQLDPRISLPKMMDTI 457
>gi|125999995|ref|YP_001039666.1| head portal-like protein [Erwinia amylovora phage Era103]
gi|121621851|gb|ABM63425.1| head portal-like protein [Enterobacteria phage Era103]
Length = 517
Score = 84.3 bits (207), Expect = 5e-14, Method: Composition-based stats.
Identities = 66/468 (14%), Positives = 138/468 (29%), Gaps = 60/468 (12%)
Query: 5 SAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY------KNNAQLRMWDTTGSEACIKLS 58
+ I + L +R E + F PY + + W G+ A LS
Sbjct: 8 NKSKIPKLYEQLVGKRSPFLSRAENYSRFTLPYLMADVNDDLSSQNAWQDDGASATNFLS 67
Query: 59 SLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGF 118
+ LS ++ P + + + + L E ++ V F
Sbjct: 68 NKLSQVLFPAQRSFFRIDLT-PEGIKQLDNEAMTQSTAQKLLSDVEKA--AMLYGESLQF 124
Query: 119 VGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV-DSVY- 176
+ + ++ G D +VPL + + ++ V D V+
Sbjct: 125 RPAVVEAFKHLIVTGN-VMMYHPDKTSPI-------QAVPLHHYCVRRDNNGTVLDIVFL 176
Query: 177 -----REFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGN 231
F ++ + + K ++++ HA ++ K +
Sbjct: 177 QEKALETFEPSIRMAIQ--------ASRKGKQYKDKDNVKLYTHA--KRTKDGKYLIRQ- 225
Query: 232 KGFHSKFVSVDENRFFEEKQIAT--FPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETV 289
S D+ +E + P+++ ++ E YGR A + +
Sbjct: 226 --------SADDVPVGKESTVTEDKSPFLILTWKRSYGEDYGRGMAEDHAGAFFVIQFLS 277
Query: 290 NELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGR-SLFQPVQFGNPLPYHE 348
LA+ L + + G EG + Q ++ + P
Sbjct: 278 EALARGMALMADVKYLVKPGSYTDINQFVEGGSGAVLHGVEGDIHIVQLGKYADYTPIQA 337
Query: 349 ELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIS 408
LN ++ I +F+++ D +A E +G + + F G + +
Sbjct: 338 VLNDYRQRIGRVFMMEA-MTRRDAERVTAYEIQRDAMLVEQSLGGVYSLFATTFQGPL-A 395
Query: 409 REL-----DILDSQGNLPECEGADNPPVSLLKVE-------YTSPLFK 444
R IL S+ P + +++ Y S +
Sbjct: 396 RWFMNGISSILTSKNVSPTILTGIEALGRMAELDKLGTFNGYVSMTAQ 443
>gi|167600476|ref|YP_001671975.1| head-tail connector protein [Pseudomonas phage LUZ19]
gi|161168339|emb|CAP45503.1| head-tail connector protein [Pseudomonas phage LUZ19]
Length = 510
Score = 83.9 bits (206), Expect = 7e-14, Method: Composition-based stats.
Identities = 60/443 (13%), Positives = 128/443 (28%), Gaps = 44/443 (9%)
Query: 46 WDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTD 105
+ + G+ L++ L+ + P G + +E A + D +V +V
Sbjct: 48 FQSAGALLVNNLAAKLARSLFPTGIPFFR-SELTDAIRREADSRDTDITEVTAALARVDR 106
Query: 106 TLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMS 165
++ S + L ++ G Y ++ ++ L + +
Sbjct: 107 KATQRLFQNAS--LAVLTQVIKLLIVTGNALLYRDSAAATV--------VAWSLRSYAVR 156
Query: 166 VNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDK 225
+ + + + + ++ L ++ + +T +
Sbjct: 157 RDATGRWMDIVLKQRYKSKDLDEEYKQD-LMRAGRNLSGSGSVDLYTHVQ---------- 205
Query: 226 KKDKGNKGFHSKFVSVDENRFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIR 283
+K + + +D R +E + PYIV + + E YGR + +
Sbjct: 206 RKKGTAMEYAELYHEIDGVRVGKEGRWPIHLCPYIVPTWNLAPGEHYGRGHVEDYIGDFA 265
Query: 284 RLNETVNELAQFGRLSLHPPTIAVSEAKQRNF---------DLKPGYMNIGALSREGRSL 334
+L+ +L + SL V EAK D PG G
Sbjct: 266 KLSLLSEKLGLYELESLEV-LNLVDEAKGAVVDDYQDAEMGDYVPGGAEAVRAYERG--- 321
Query: 335 FQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPL 394
+ + L + + F+ D +A E E +G
Sbjct: 322 ----DYNKMAAIQQSLQAVVVRLNQAFMY--GANQRDAERVTAEEVRITAEEAENTLGGT 375
Query: 395 IGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASA 454
L + L +D L + P + S Q + +
Sbjct: 376 YSLLAENLQSPLAYVCLSEVDDA-LLQGLITKQHKPAIETGLPALSRSAAVQSMLNASQV 434
Query: 455 LQGVNTVVELGVKTGDPSCMDHM 477
+ G+ + +L + P MD +
Sbjct: 435 IAGLAPIAQLDPRISLPKMMDTI 457
>gi|311875235|emb|CBX44494.1| bacteriophage head-to-tail connecting protein [Erwinia phage
phiEa1H]
gi|311875356|emb|CBX45097.1| head-to-tail connecting protein [Erwinia phage phiEa100]
Length = 517
Score = 83.5 bits (205), Expect = 7e-14, Method: Composition-based stats.
Identities = 65/468 (13%), Positives = 138/468 (29%), Gaps = 60/468 (12%)
Query: 5 SAKDIQDRFNYLKNQRGELNYWMEELTGFLYPY------KNNAQLRMWDTTGSEACIKLS 58
+ I + L +R E + F PY + + W G+ A LS
Sbjct: 8 NKSKIPKLYEQLVGKRSPFLSRAENYSRFTLPYLMADVNDDLSSQNAWQDDGASATNFLS 67
Query: 59 SLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGF 118
+ LS ++ P + + + + L E ++ V F
Sbjct: 68 NKLSQVLFPAQRSFFRIDLT-PEGIKQLDNEAMTQSTAQKLLSDVEKA--AMLYGESLQF 124
Query: 119 VGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV-DSVY- 176
+ + ++ G D +VPL + + ++ + D V+
Sbjct: 125 RPAVVEAFKHLIVTGN-VMMYHPDKTSPI-------QAVPLHHYCVRRDNNGTILDIVFL 176
Query: 177 -----REFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGN 231
F ++ + + K ++++ HA ++ K +
Sbjct: 177 QEKALETFEPSIRMAIQ--------ASRKGKQYKDKDNVKLYTHA--KRTKDGKYLIRQ- 225
Query: 232 KGFHSKFVSVDENRFFEEKQIAT--FPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETV 289
S D+ +E + P+++ ++ E YGR A + +
Sbjct: 226 --------SADDVPVGKESTVTEDKSPFLILTWKRSYGEDYGRGMAEDHAGAFFVIQFLS 277
Query: 290 NELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGR-SLFQPVQFGNPLPYHE 348
LA+ L + + G EG + Q ++ + P
Sbjct: 278 EALARGMALMADVKYLVKPGSYTDINQFVEGGSGAVLHGVEGDIHIVQLGKYADYTPIQA 337
Query: 349 ELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIS 408
LN ++ I +F+++ D +A E +G + + F G + +
Sbjct: 338 VLNDYRQRIGRVFMMEA-MTRRDAERVTAYEIQRDAMLVEQSLGGVYSLFATTFQGPL-A 395
Query: 409 REL-----DILDSQGNLPECEGADNPPVSLLKVE-------YTSPLFK 444
R IL S+ P + +++ Y S +
Sbjct: 396 RWFMNGISSILTSKNVSPTILTGIEALGRMAELDKLGTFNGYVSMTAQ 443
>gi|291335778|gb|ADD95380.1| hypothetical protein [uncultured phage MedDCM-OCT-S05-C429]
Length = 315
Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/296 (16%), Positives = 99/296 (33%), Gaps = 19/296 (6%)
Query: 256 PYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNF 315
P++V + E YGR E L ++ L L + + + + +
Sbjct: 30 PWLVLTFNSVDGEQYGRGRVEEFLGDLKSLEGLSQALVEGAAAASKVIFLVSPSSTTKPA 89
Query: 316 DLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASR 375
+ GA+ + Q VQ G + N + R L L + +
Sbjct: 90 TIAKAG--NGAIVQGRAEDVQVVQVGKTADFSTAANMSQTIERRLLEAFLVMNVRNAERV 147
Query: 376 SAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLK 435
+A E E +G + L F+ + R L +L LP+ P +
Sbjct: 148 TAEEVRLTQLELEQQLGGIFSLLTVSFLIPYLDRTLLVLQRTNELPKLPKDIIRPTIVAG 207
Query: 436 VEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCM-DHMDTDRVSRFSLWATNTPA 494
V + L + Q E++ Q + T+ + T P + ++ + A
Sbjct: 208 V---NALGRGQDREALT---QFMGTIAQ----TIGPEALGQFINPLEAIKRLAAAQGIDV 257
Query: 495 -VLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHD 549
L++ ++ ++E ++ ++Q L Q Q + A M+ + +
Sbjct: 258 LNLVKTQEQLAG---EKEEAMQMQQQQTLLNQAGQFANS--KLADTENMQGMMQGE 308
>gi|291334263|gb|ADD93926.1| hypothetical protein [uncultured marine bacterium
MedDCM-OCT-S08-C235]
Length = 130
Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 11/126 (8%)
Query: 368 VLDDKAS--RSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEG 425
+L D SA E E+ + +G G LQ+E + ++ R + IL QG +
Sbjct: 1 MLGDPNRTPMSATEVAERMADLSRQIGSSFGRLQAEMVTPVLQRVIHILKKQGRI----N 56
Query: 426 ADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMD-HMDTDRVSR 484
+K++ TSPL + Q + + + + V P ++ +D++ ++
Sbjct: 57 IPTVNGREIKIQSTSPLAQAQANQDINGFNRFLELVG----ARFGPQLINLLVDSNEATK 112
Query: 485 FSLWAT 490
+
Sbjct: 113 YLAENL 118
>gi|167565008|ref|ZP_02357924.1| head-to-tail joining protein [Burkholderia oklahomensis EO147]
Length = 509
Score = 81.6 bits (200), Expect = 3e-13, Method: Composition-based stats.
Identities = 81/510 (15%), Positives = 155/510 (30%), Gaps = 69/510 (13%)
Query: 9 IQDRFNYLKNQRGELNYWMEELTGFLYPY----KNNAQLRM----WDTTGSEACIKLSSL 60
++DR+ L R + P ++ + + G +SS
Sbjct: 4 LKDRYQELVPDRDPYFRRAQACAALTVPSVCPPDGQTSQQILPQSYTSFGHRGATNVSSK 63
Query: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
L PPG + S + ++ + Q + E +
Sbjct: 64 LMMAFMPPGDSAFNIEVSTQVL--LQEGVLSPPPEIVKGLAQCEQLINAKIE--ALNWRR 119
Query: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
+V G Y++ D R LS + V
Sbjct: 120 QTYLSLLHLVVAGNVGEYIQPDG---------RLKIFSLSQFVCVRDFNGRV-------- 162
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS 240
K + L ++ A+ E E T+ + + ++ ++
Sbjct: 163 MEA-VTAEKLKVRELPKDLQRVTAKKEREDVTLY----------TRFEWVDENRYAVHQD 211
Query: 241 VDENRFFEEKQIAT----FPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFG 296
+D+ K P+ + + E YGRS + + L++T +L + G
Sbjct: 212 LDDAVV---KPYQEYNGIMPFNALAWELVPGESYGRSHVEQNYSDLIALDKTSQQLLECG 268
Query: 297 RLSLHP-----PTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYH---E 348
++ P A ++R + + G + +G QP QF N
Sbjct: 269 AIAARNLIFVAPNAAGGNLRKRIMEARNGSVISARGGTQGD--VQPFQFNNMAAMQSLNA 326
Query: 349 ELNRLKESIRSLFL--LDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAM 406
E LK + FL DL D +A E E +G + L E IG
Sbjct: 327 EKQDLKRDLAVAFLLTNDL---RRDAERVTAYELQMLVTEIEQSLGGVYSYLGPEMIGWR 383
Query: 407 ISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
+ + + + S+ LP+ G D+ +++ + L K + + V S L +N +
Sbjct: 384 LKKLVAQMQSKDELPKI-GKDSTQITVTTG--LAALGKDAKLKKVHSFLSLLNETPQ--- 437
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTPAVL 496
++ D + + A P +
Sbjct: 438 -AFQQEAAAYVKFDTILTPAAAALGFPQSI 466
>gi|158345057|ref|YP_001522822.1| putative head-tail connector protein [Pseudomonas phage LKD16]
gi|114796410|emb|CAK25966.1| putative head-tail connector protein [Pseudomonas phage LKD16]
Length = 510
Score = 80.5 bits (197), Expect = 7e-13, Method: Composition-based stats.
Identities = 66/449 (14%), Positives = 126/449 (28%), Gaps = 56/449 (12%)
Query: 46 WDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTD 105
+ + G+ L++ L+ + P G + +E A + D +V +V
Sbjct: 48 FQSAGALLVNNLAAKLARSLFPTGIPFFR-SELTDAIRREADSRDTDITEVTAALARVDR 106
Query: 106 TLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMS 165
++ S + L ++ G Y +D ++ L + +
Sbjct: 107 KATQRLFQNAS--LAVLTQVIKLLIVTGNALLYRNSDEATV--------VAWSLRSYAVR 156
Query: 166 VNHQNV-VDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE-----RFTIIHAVYP 219
+ +D V + ++ K L K L R + V
Sbjct: 157 RDATGRWMDIV----------LKQRYKSKDLDDVYKQDLMRAGRNLSGSGSVDLYTHVQR 206
Query: 220 KSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAME 277
+ + + +D R E + PYIV + + E YGR +
Sbjct: 207 RK-------GTAMDYAEMYHEIDGVRVGETGRWPIHLCPYIVPTWNLAPGEHYGRGHVED 259
Query: 278 ALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNF---------DLKPGYMNIGALS 328
+ +L+ +L + SL V EAK D PG
Sbjct: 260 YIGDFAKLSLLSEKLGLYELESLEV-LNLVDEAKGAVVDDYQDAEMGDYVPGGAEAVRAY 318
Query: 329 REGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKG 388
G + + L + + F+ D +A E E
Sbjct: 319 ERG-------DYNKMAAIQQSLQAVVVRLNQAFM--YGANQRDAERVTAEEVRITAEEAE 369
Query: 389 AFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQA 448
+G L + L +D L + P + S Q
Sbjct: 370 NTLGGTYSLLAENLQSPLAYVCLSEVDDA-LLQGLITKQHKPAIETGLPALSRSAAVQSM 428
Query: 449 ESVASALQGVNTVVELGVKTGDPSCMDHM 477
+ + + G+ + +L + P MD +
Sbjct: 429 LNASQVIAGLAPIAQLDPRISLPKMMDTI 457
>gi|254505047|ref|ZP_05117198.1| hypothetical protein SADFL11_5087 [Labrenzia alexandrii DFL-11]
gi|222441118|gb|EEE47797.1| hypothetical protein SADFL11_5087 [Labrenzia alexandrii DFL-11]
Length = 400
Score = 80.5 bits (197), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/260 (17%), Positives = 92/260 (35%), Gaps = 17/260 (6%)
Query: 254 TFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIA---VSEA 310
T P+ R+ E YGR E + L+ + ++ T+ + +
Sbjct: 135 TNPFNPLRWSAVPGEDYGRGKVEEHFSDLTYLDLLSKSMVDGSAMATRHITMVRPNAAGS 194
Query: 311 KQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLD 370
R + ++ + + E L Q +E+ R+ + + FLL ++
Sbjct: 195 NLRKRFAEAKNGDVISGNPEDVDLKQFANVTGMQIAQQEIARITQELAQAFLLS-SSMIR 253
Query: 371 DKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPP 430
+ +A E E + +G + L + + A I + + + G LP P
Sbjct: 254 NAERVTAQEVRMIAEELESVLGGVYSYLSQDMMSARIEALMTSMMAAGQLPPVLQMTQP- 312
Query: 431 VSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWAT 490
+L V L + + V + LQ + + P +D++D + + +
Sbjct: 313 --VLTVG-LEALERDKDVMRVQTVLQTLQAL--------PPDFLDYLDIPDLLKTFMIGL 361
Query: 491 NTPAVLIRDTAEVEDIRQQR 510
P ++ E + RQQR
Sbjct: 362 GLPGK-VKTEQEAQQTRQQR 380
>gi|291334897|gb|ADD94534.1| T7-like head to tail connector [uncultured phage
MedDCM-OCT-S08-C159]
Length = 416
Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 80/247 (32%), Gaps = 15/247 (6%)
Query: 249 EKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVS 308
++ P+I R+ E YGR E + L + + + S +
Sbjct: 120 RSKLDVSPWIPLRFIRVDGEDYGRGYVEEYRGDLISLESLMQAIIEGAAASAKTLFLVNP 179
Query: 309 EAKQRNFDLK--PGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLF 366
R L P L+ + S+ Q + G+ + R++ + FL+
Sbjct: 180 NGVTRAATLAKAPNGAIREGLASDI-SVMQVGKSGDFSVAFSAIQRIEGRLEFAFLMAR- 237
Query: 367 QVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGA 426
V D +AAE +E +G + L EF + R + +L QG +P+
Sbjct: 238 SVQRDAERVTAAEVSLMAQELENSLGGIYSILTQEFQLPYLRRRMHLLVRQGKVPKLPDE 297
Query: 427 DNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCM-DHMDTDRVSRF 485
P + + Q + + + + G P M +++ D +
Sbjct: 298 LVKPKIVTGL---------QGLGRGNDRNKLIEFIGTVAQALG-PDVMRQYVNVDEAVKR 347
Query: 486 SLWATNT 492
+
Sbjct: 348 LATSIGI 354
>gi|315518948|dbj|BAJ51825.1| putative head to tail joining protein [Ralstonia phage RSB2]
Length = 531
Score = 78.5 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 84/555 (15%), Positives = 169/555 (30%), Gaps = 64/555 (11%)
Query: 13 FNYLKNQRGELNYWMEELTGFLYPY-----KNNAQLRM---WDTTGSEACIKLSSLLSSL 64
+ L+N R E+ + P +N + + G+ L++ L
Sbjct: 19 YTRLENDRAPYITRAEKNAQYTIPSLFPKSSDNYSTDYPTPYQSVGARGLNNLAAKLVLS 78
Query: 65 ITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREW----CDQVTDTLFGFRERSRSGFVG 120
+ P G+ +H L S + V E V + E + G
Sbjct: 79 LIPVGEPFHRLTISEFDVKE-TAGGTGEEGSVMERAQVGLSMVERIITAHGESA--GLRP 135
Query: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV-DSVYREF 179
++ G G + + L N + + V ++ ++
Sbjct: 136 MASELMKQLLVAGNGLVCLPPQE--------VACKLYKLHNFVVERDSVGNVLQTIAKDV 187
Query: 180 TFTVDQIVSKWGDKVLSSKMKSALARN---ENERFTIIHAVYPKSLTDKKKDKGNKGFHS 236
T L ++K+AL N T+ Y +D+
Sbjct: 188 T----------AYVALPEEVKAALPEGDYQPNSPITMYTHCYRDLESDQWLA-------- 229
Query: 237 KFVSVDENRF-FEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELA 293
+ V+ E PYI R + E YGRS E + + L +
Sbjct: 230 -YQEVEGEVIPGSENTYPKEGNPYIPIRMYKQDGENYGRSFVEEYIGDLVSLENISKAIV 288
Query: 294 QFGRLSLHPPTIA-VSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNR 352
QF + + K + +E +FQ +F + +
Sbjct: 289 QFAIACSKILFLVKPGSSTSVRRVAKAASGDFVPGKKEDIEVFQMEKFADFQTAKSVADG 348
Query: 353 LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELD 412
+++ + FLL+ V +A E + E + +G + L +EF ++ R L
Sbjct: 349 IEQRLSFAFLLN-SSVQRSGERVTAEEIRFVSAELESTLGGVYSVLATEFQLPIVRRWLI 407
Query: 413 ILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPS 472
L + G +P+ P + ++ + Q +A+ + V+
Sbjct: 408 DLQATGKIPDLPTEALKPQIITGIDAIG---RGQDQAKLAAFQSLIQPFVQ--------R 456
Query: 473 CMDHMDTDRVSRFSLWATNT-PAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQ 531
+ +D D + + A+ PA LI +++ R +E + + +
Sbjct: 457 VSNRVDWDGLLLKAANASGLDPAGLILTDQQMQA-RATQEGITQGLVQGGASAGATAGQG 515
Query: 532 DIGAKAAGRAMEKKL 546
A +++ L
Sbjct: 516 MGAAMTDPEGIQQAL 530
>gi|291334524|gb|ADD94177.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1201]
gi|291334656|gb|ADD94303.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C695]
gi|291334710|gb|ADD94356.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C890]
gi|291336436|gb|ADD95991.1| hypothetical protein [uncultured organism MedDCM-OCT-S04-C1073]
Length = 95
Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 35/93 (37%), Gaps = 13/93 (13%)
Query: 38 KNNAQLR---MWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSK 94
++ R ++D + ++ L++ L ++T P W L F +
Sbjct: 12 RSKGDKRTELIFDGSPLQSVELLAASLHGMLTNPSTPWFSLR--------FKQNDMENED 63
Query: 95 KVREWCDQVTDTLFGFRERSRSGFVGCLQSFYT 127
+ +EW + T+ ++ ++S F +
Sbjct: 64 EAKEWLEDATEVMYSAF--NKSNFQQEYLNCIM 94
>gi|157828579|ref|YP_001494821.1| hypothetical protein A1G_03995 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|157801060|gb|ABV76313.1| hypothetical protein A1G_03995 [Rickettsia rickettsii str. 'Sheila
Smith']
Length = 111
Score = 73.5 bits (179), Expect = 8e-11, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Query: 175 VYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKG---- 230
+YR F+ + +KW D K LA+N +E I+H V P+S + K
Sbjct: 1 MYRLFSMPIKAASAKWPDFA---DFKERLAKNPDETVKILHIVSPQSENQRGKGGKGKGL 57
Query: 231 --NKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALP 280
+ S+++ + E + + + FP+ V + ++YG +PA A+
Sbjct: 58 MTTLAYSSEYIYLSEQKIISQSGYSYFPFFVTLWIKGEGQVYGYAPAHHAIS 109
>gi|165933293|ref|YP_001650082.1| hypothetical protein RrIowa_0838 [Rickettsia rickettsii str. Iowa]
gi|165908380|gb|ABY72676.1| hypothetical protein RrIowa_0838 [Rickettsia rickettsii str. Iowa]
Length = 111
Score = 73.1 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 175 VYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKG---- 230
+YR F+ + +KW D K LA+N +E I+H V P+S + K
Sbjct: 1 MYRLFSMPIKAASAKWPDFA---DFKERLAKNPDETVKILHIVSPQSENQRGKGGKGKGL 57
Query: 231 --NKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALP 280
+ S+++ + E + + FP+ V + ++YG +PA A+
Sbjct: 58 MTTLAYSSEYIYLSEQKIISQSGYLYFPFFVTLWIKGEGQVYGYAPAHHAIS 109
>gi|167841465|ref|ZP_02468149.1| head-to-tail joining protein [Burkholderia thailandensis MSMB43]
Length = 519
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 63/523 (12%), Positives = 144/523 (27%), Gaps = 67/523 (12%)
Query: 10 QDRFNYLKNQRGELNYWMEELTGFLYP------YKNNAQLRM---WDTTGSEACIKLSSL 60
+ + L R L E+ + F P N + + + G++ L++
Sbjct: 6 EQAWESLAGLRRPLLTRCEKYSAFTLPTIITPQGYNEELEELQTDFQSVGAQGVNNLANK 65
Query: 61 LSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVG 120
L + P + + + + D + + ++E + R G
Sbjct: 66 LMLALFAPSRPFFRYQVAAALMNQLKQTLDVQEQDLQEMLAEGERNC--IRTLDAMGVRP 123
Query: 121 CLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFT 180
L ++ G C + D + + L + + +
Sbjct: 124 KLYEAMKHLIITGN-CLLILGDDPKDTPMRV-----LSLKRYAVKRSMSGKL------LQ 171
Query: 181 FTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVS 240
+ + V ++ L +++ + + + D K F
Sbjct: 172 LIIHETV-RF--DELDDEVQKIAVESSSRYANV-------DPNDPNSCPEVKYFTWVRWD 221
Query: 241 VDENRFFEE-----------KQIA---TFPYIVGRYRVRADEIYGRSPAMEALPTIRRLN 286
N PYI + + D YG + + L+
Sbjct: 222 GTANYIVTHHVDNVELPAKFSGKYTDQDLPYIPLTWELHDDNDYGTGLVEQMAGDLAALS 281
Query: 287 ETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPY 346
+ L+ + + R D+ + GA + P+ G
Sbjct: 282 ALSEAEVKGAILASEFRWLVNPAGQTRPADI--ADSDNGAALPGTKDDVVPLNSGTGQAM 339
Query: 347 H---EELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFI 403
+ I FLL ++ D +A E + E +G + L +F
Sbjct: 340 QYIDTVATKYVNRIGRNFLLS-SSIVRDAERVTAEEIRMQANELETSLGGVYSRLAVDFQ 398
Query: 404 GAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVE 463
M + G + G D P+ + ++ L + +++ ALQ + V
Sbjct: 399 KPM---AYWLTKRAGV--QLAGKDIEPMVITGLD---ALSRNGDLDNLKLALQDLAAVSG 450
Query: 464 LGVKTGDPSCMDHMDTDRVSRFSLWATNTP-AVLIRDTAEVED 505
+ P + ++ +++ A ++ +
Sbjct: 451 M-----PPQALAVLNLTAIAKAIFMGRGVTMADYVKSQEQQAA 488
>gi|108862014|ref|YP_654130.1| 29 [Enterobacteria phage K1-5]
gi|40787100|gb|AAR90071.1| 29 [Enterobacteria phage K1-5]
Length = 516
Score = 65.4 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 64/490 (13%), Positives = 152/490 (31%), Gaps = 60/490 (12%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYPY------KNNAQLRMWDTTGSEACIKLSS 59
I + N+R + + PY N W G++A L++
Sbjct: 13 RSKIPKLWEKFSNKRSSFLDRAKHYSKLTLPYLMNDKGDNETSQNGWQGVGAQATNHLAN 72
Query: 60 LLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFV 119
L+ ++ P + + + + + + +++ + T + +E + F
Sbjct: 73 KLAQVLFPAQRSFFRVDLTAQGEKVLNQRGLKKTELATIFAQVETRAM---KELEQRQFR 129
Query: 120 GCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQN-VVDSVY-- 176
+ + ++ G C + ++P+ + ++ + ++D +
Sbjct: 130 PAVVEAFKHLIVAG-SCMLYKPSKGAIS--------AIPMHHYVVNRDTNGDLLDIILLQ 180
Query: 177 ----REFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDK-KKDKGN 231
R F +V + K K + + +T HA Y + K+ +
Sbjct: 181 EKALRTFDPATRAVVE------VGLKGKKCKEDDSVKLYT--HAKYLGDGFWELKQSADD 232
Query: 232 KGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNE 291
++ EK P+I ++ E +GR A + + +
Sbjct: 233 IPVGKV------SKIKSEK----LPFIPLTWKRSYGEDWGRPLAEDYSGDLFVIQFLSEA 282
Query: 292 LAQFGRLSLHPPTIAVSEAKQRNFD--LKPGYMNIGALSREGRSLFQPVQFGNPLPYHEE 349
+A+ L + A Q + D + G + E + Q ++ + P
Sbjct: 283 VARGAALMADIKYLIRPGA-QTDVDHFVNSGTGEVVTGVEEDIHIVQLGKYADLTPISAV 341
Query: 350 LNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISR 409
L I +F+++ D +A E E +G + + +
Sbjct: 342 LEVYTRRIGVVFMMET-MTRRDAERVTAVEIQRDALEIEQNMGGVYSLFATTMQSPV--- 397
Query: 410 ELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVEL----G 465
+ L G E +D ++ L + + + +A+ Q ++ ++
Sbjct: 398 AMWGLLEAG---ESFTSDLVDPVIITG--IEALGRMAELDKLANFAQYMSLPLQWPEPVL 452
Query: 466 VKTGDPSCMD 475
P MD
Sbjct: 453 AAVKWPDYMD 462
>gi|312062873|gb|ADQ12735.1| putative Head-tail connector protein [Acinetobacter phage phiAB1]
Length = 518
Score = 65.0 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 78/293 (26%), Gaps = 19/293 (6%)
Query: 255 FPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVN--ELAQFGRLSLHPPTIAVSEAKQ 312
PYI + + YGR E +L+E Q L + A
Sbjct: 235 CPYIPVTWSYMNGDAYGRGYVEEYAGDFAKLSELSQGLTEYQIESLIIRHVYNA-QGGFD 293
Query: 313 RNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDK 372
+ + + + ++ + L + + + F+ + +
Sbjct: 294 VESAVNSRNGDWISGNVNAVQNYESGSYQKMNEVRLGLEAIMQRLNVAFMYT--GNMREG 351
Query: 373 ASRSAAESMEKTREKGAFVGPLIGGL-QSEFIGAMISRELDILDSQGNLPECEGADNPPV 431
+A E E +G + L Q+ + + +L +
Sbjct: 352 DRVTAYEIARNADEAEQVLGGVYSQLSQNMHL-PL---AYLLLYEVRK----DFIQAIDR 403
Query: 432 SLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATN 491
+++ + L ++ + L N + + + D + L +
Sbjct: 404 QEIELNILTGLQALSRSSENQALLVAANEIATVAQVFS--QVSKRFNLDAIVDKILLSNG 461
Query: 492 TP-AVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAME 543
+ + E+ + E QR ++ Q +A +
Sbjct: 462 IDISEITYSEEEMRA--KAMEEQRAAEAQRQQVIQQAGAQLGGNQLENTQAAQ 512
>gi|294661422|ref|YP_003347633.2| head-tail connector protein [Klebsiella phage KP34]
gi|291195554|gb|ACY66713.2| head-tail connector protein [Klebsiella phage KP34]
Length = 531
Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 74/517 (14%), Positives = 162/517 (31%), Gaps = 49/517 (9%)
Query: 38 KNNAQLRMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVR 97
+ R + +TG++ ++ + + P G + ++S + A + + +
Sbjct: 44 RRRPLERDYQSTGAQLVNTAATKIVGALFPQGTSFFRFSKSSDLDEFISSLGSAATAESK 103
Query: 98 EWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISV 157
+V +T + + G+ LQ+ +V G Y++ + + +
Sbjct: 104 --LAEVENTA-SQKVFEKDGYAAKLQAVKLLLVT-GNALEYIDERTGKSIVYSVRNFT-- 157
Query: 158 PLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAV 217
+ + V + + S + L ++ R+++ + +
Sbjct: 158 ------VRRDGSGNV------LRLIIRERAS---VQDLPESFQNTFYRDKDPYGDV--DI 200
Query: 218 YPKSLTDKKKDKGNKGFHS--KFVSVDENRFFEEKQI--ATFPYIVGRYRVRADEIYGRS 273
Y + K+ + S + D +R + PY V + + + E YGR
Sbjct: 201 YTAACRKVKRTEEGVEVVSYEVYQEADGHRIGDSSTYPELELPYNVLVWNLVSGEHYGRG 260
Query: 274 PAMEALPTIRRLNETVN--ELAQFGRLSLHPPTIAVSEAKQRNFDLKPGY----MNIGAL 327
+ RL+ + L P A S F + G
Sbjct: 261 LVEDYAGDFARLSVLSEALTNYEVESARLIPLIDASSGLDVDEFATSETGEAVQVGGGGS 320
Query: 328 SREGRSLFQPVQFGNPLPYH---EELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKT 384
+ +S + G+ + L++ + F+ +A E +
Sbjct: 321 NGNSKSPVTAYEGGSAQKIQWIASNIQMLEQKLSRAFMYT--GNSRQGERVTAYEIRQNA 378
Query: 385 REKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEY-TSPLF 443
+E A +G L ++ R+L L + P + + V + V TS L
Sbjct: 379 KEAEAAMGGGFSILSDTWL-----RKLAYLYTALVYPRFKLYLSEGVVSINVTVGTSALA 433
Query: 444 KYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEV 503
K A+ + A Q + + + ++ P + D + A + T E
Sbjct: 434 KAAAADKLLEAAQSMQLAIPV-LEQITP----RFNKDACVDWYFDAYGIVSEPFMYTEEQ 488
Query: 504 EDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGR 540
+QQ + + Q QLQ + A +
Sbjct: 489 LQQKQQVQDASADVSAGAAQDQLQGLTAADPTVAGKQ 525
>gi|158345175|ref|YP_001522882.1| putative head-tail connector protein [Enterobacteria phage LKA1]
gi|114796471|emb|CAK25009.1| putative head-tail connector protein [Pseudomonas phage LKA1]
Length = 514
Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 61/474 (12%), Positives = 129/474 (27%), Gaps = 59/474 (12%)
Query: 46 WDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCD---Q 102
+ + G+ L++ L+ + PPG+ + + + +S+ D +
Sbjct: 50 FQSAGAFLVNNLTAKLALTLFPPGRPSFQIELDDTLQELAAANGIDQSELHSRTADLERR 109
Query: 103 VTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNV 162
T LF S+ L +V G FY E + + + +
Sbjct: 110 ATRRLFVNASLSK------LHRILKLLVVTGNALFYREPGTGKMLV--------WTMQSY 155
Query: 163 YMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSL 222
+ V ++ + + ++ ++ + +T+I
Sbjct: 156 TVRRTSHGDPAVVVLRQQMPFRELTPEIQADAQAKQIAKR-DSDKCDLYTVIE------- 207
Query: 223 TDKKKDKGNKGFHSKFVSVDENRFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALP 280
+ N + + ++ R E PY+ + V E YGR E
Sbjct: 208 ---WQPTPNGKRCAVWHELEGKRVGPESSYPAHLCPYVPVAWNVPDGEHYGRGYVEEYSG 264
Query: 281 TIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNF---------DLKPGYMNIGALSREG 331
RL+ L + +L V EAK D PG + A G
Sbjct: 265 DFARLSILSERLGLYEFEALS-LLNLVDEAKGGAVDDYRDAETGDFVPGQVGSVASYERG 323
Query: 332 RSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFV 391
+ + + + F+ + D + E E +
Sbjct: 324 -------DYNKIAQASASVESIVMRLNRAFMYT--GQVRDAERVTVEEIRTVAEEAENLL 374
Query: 392 GPLIGGLQSEFIGAMISRELDILDS--QGNLPECEGADNPPVSLLKVEYTSPLFKYQQAE 449
G + L + + G L P + L + +
Sbjct: 375 GGVYSLLAETLQAPLAYLTMYEASRGNGGMLLGIAQGVYRPSI---ITGIPALTRNIETA 431
Query: 450 SVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEV 503
++ A Q + +V V+ D +++ + + +V
Sbjct: 432 NILRATQEASAIVPALVQLSK-----RFDPEKLVERIFANNSVDLSTLSKDPDV 480
>gi|83571754|ref|YP_425006.1| putative head-tail connector [Enterobacteria phage K1E]
gi|83308205|emb|CAJ29437.1| gp29 protein [Enterobacteria phage K1E]
Length = 516
Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 64/490 (13%), Positives = 152/490 (31%), Gaps = 60/490 (12%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYPY------KNNAQLRMWDTTGSEACIKLSS 59
I + +R + + PY N W G++A L++
Sbjct: 13 RSKIPKLWEKFSTKRSSFLDRAKHYSKLTLPYLMNDKGDNETSQNGWQGVGAQATNHLAN 72
Query: 60 LLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFV 119
L+ ++ P + + + + + + +++ + T + +E + F
Sbjct: 73 KLAQVLFPAQRSFFRVDLTAQGEKVLNQRGLKKTELATIFAQVETRAM---KELEQRQFR 129
Query: 120 GCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQN-VVDSVY-- 176
+ + ++ G C + ++P+ + ++ + ++D +
Sbjct: 130 PAVVEAFKHLIVAG-SCMLYKPSKGAIS--------AIPMHHYVVNRDTNGDLLDIILLQ 180
Query: 177 ----REFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDK-KKDKGN 231
R F +V + K K + + +T HA Y + K+ +
Sbjct: 181 EKSLRTFDPATRAVVE------VGLKGKKCKEDDSIKLYT--HAKYLGEGFWELKQSADD 232
Query: 232 KGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNE 291
++ EK P+I ++ E +GR A + + +
Sbjct: 233 IPVGKV------SKIKSEK----LPFIPLTWKRSYGEDWGRPLAEDYSGDLFVIQFLSEA 282
Query: 292 LAQFGRLSLHPPTIAVSEAKQRNFD--LKPGYMNIGALSREGRSLFQPVQFGNPLPYHEE 349
+A+ L + A Q + D + G + E + Q ++ + P
Sbjct: 283 VARGAALMADIKYLIRPGA-QTDVDHFVNSGTGEVVTGVEEDIHIVQLGKYADLTPISAV 341
Query: 350 LNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISR 409
L I +F+++ D +A E E +G + + +
Sbjct: 342 LEVYTRRIGVVFMMET-MTRRDAERVTAVEIQRDALEIEQNMGGVYSLFATTMQSPV--- 397
Query: 410 ELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVEL----G 465
+ L G+ PV + +E L + + + +A+ Q ++ ++
Sbjct: 398 AMWGLLEAGD--SFTSDLVDPVIITGIE---ALGRMAELDKLANFAQYMSLPLQWPEPVL 452
Query: 466 VKTGDPSCMD 475
P MD
Sbjct: 453 AAVKWPDYMD 462
>gi|31711672|ref|NP_853590.1| head portal protein [Enterobacteria phage SP6]
gi|31505676|gb|AAP48769.1| gp30 [Enterobacteria phage SP6]
gi|40787047|gb|AAR90021.1| 29 [Enterobacteria phage SP6]
Length = 515
Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 55/453 (12%), Positives = 132/453 (29%), Gaps = 72/453 (15%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFLYPY------KNNAQLRMWDTTGSEACIKLSS 59
I + +R + PY N W G++A L++
Sbjct: 12 RSKIPKLWEKFSKKRSPYLDRAKHFAKLTLPYLMNNKGDNETSQNGWQGVGAQATNHLAN 71
Query: 60 LLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFV 119
L+ ++ P + + + + + + +++ + T + +R F
Sbjct: 72 KLAQVLFPAQRSFFRVDLTAKGEKVLDDRGLKKTQLATIFARVETTAMKALEQRQ---FR 128
Query: 120 GCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV-DSVYRE 178
+ + ++ G C + +VP+ + ++ + + D +
Sbjct: 129 PAIVEVFKHLIVAGN-CLLYKPSKGAMS--------AVPMHHYVVNRDTNGDLMDVI--- 176
Query: 179 FTFTVDQIVSKWGDKVLSSKMKSALAR-------NENERFTII-HAVYPKSLTDKKKDKG 230
++ + + + A+ E++ + HA Y
Sbjct: 177 -------LLQEKALRTFDPATRMAIEVGMKGKKCKEDDNVKLYTHAQY-----------A 218
Query: 231 NKGFHSKFVSVDENRFFEEKQIAT--FPYIVGRYRVRADEIYGRSPAMEALPTIRRLNET 288
+GF S D+ +E +I + P+I ++ E +GR A + + +
Sbjct: 219 GEGFWKINQSADDIPVGKESRIKSEKLPFIPLTWKRSYGEDWGRPLAEDYSGDLFVIQFL 278
Query: 289 VNELAQFGRLSLHPPTIA-VSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYH 347
+A+ L + + + G + E + Q ++ + P
Sbjct: 279 SEAMARGAALMADIKYLIRPGSQTDVDHFVNSGTGEVITGVAEDIHIVQLGKYADLTPIS 338
Query: 348 EELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIG----------- 396
L I +F+++ D +A E E +G +
Sbjct: 339 AVLEVYTRRIGVIFMMET-MTRRDAERVTAVEIQRDALEIEQNMGGVYSLFAMTMQTPIA 397
Query: 397 ---------GLQSEFIGAMISRELDILDSQGNL 420
SE + +I ++ L L
Sbjct: 398 MWGLQEAGDSFTSELVDPVIVTGIEALGRMAEL 430
>gi|296532334|ref|ZP_06895072.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296267358|gb|EFH13245.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 72
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 9 IQDRFNYLKNQRGELNYWMEELTGFLY---PYKNNAQLRMWDTTGSEACIKLSSLLSSLI 65
I R+ +R +E + P A ++D T +A +L++ L + +
Sbjct: 8 ILPRYQAALARRRPWEGVWQECYDHVLAQTPGSGGAM--LYDATAPDAAEQLAASLLAEL 65
Query: 66 TPPGQKW 72
TPP +W
Sbjct: 66 TPPWSRW 72
>gi|197935883|ref|YP_002213719.1| head portal-like protein [Ralstonia phage RSB1]
gi|197927046|dbj|BAG70388.1| head portal-like protein [Ralstonia phage RSB1]
Length = 514
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/530 (12%), Positives = 143/530 (26%), Gaps = 60/530 (11%)
Query: 19 QRGELNYWMEELTGFLYPYKN-NAQLRM---WDTTGSEACIKLSSLLSSLITPPGQKWHG 74
+R E + + L P N Q + + + GSE LS+ L + P +
Sbjct: 24 RRSERYASWTQPS--LCPPDGFNEQTELQNDYQSVGSECVNSLSNRLVLNLFAPSRP--- 78
Query: 75 LAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGT 134
+ A K D ++ + ++ + L ++ G
Sbjct: 79 -FMRYDVPPAIAAKLDIDPAVLQTQLSKAERDSVKLLDQLSTR--PKLFEAIKHLIVIGN 135
Query: 135 GCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWGDKV 194
+ D +VP+ + + ++ + K+
Sbjct: 136 VLVILGKDKTTP-------LRTVPIKKFRCKRSPSGKLVTLAIKECL-------KF--DE 179
Query: 195 LSSKMKSALARNENERFTIIHAVYPKSLTDKK--KDKGNKGFHSKFVSVD-ENRFFEEKQ 251
L K++ L ++ P + D + + + V ++
Sbjct: 180 LDEKVQQKLLEQSPTKYQFT----PNNPPDCEWYTEVCLQPDGRYAVRTQVDDAMLTGHG 235
Query: 252 IA------TFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTI 305
PY V + + YG + ++ Q L+ +
Sbjct: 236 YDAMYTEEEMPYRVLTWELPDGWHYGIGLVEQHAGDFAAISTMSASQLQSAILASEFRWL 295
Query: 306 AVSEAKQRN---FDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEEL-NRLKESIRSLF 361
+ + + G + G+ + L + + ++ + F
Sbjct: 296 VNPAGITQPEDMVNSQNGDVVPGSPDDVVAVTAATAGVASALQVQDLILSKYVTRVGRAF 355
Query: 362 LLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLP 421
LL D +A E E +G + L +F + + G
Sbjct: 356 LL-ASAAQRDAERVTAEEIRRDVLELETSLGGVYSRLAVDFQKPL---AYWLARMLGVKL 411
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDR 481
G ++ L L + E++ ALQ + V ++ G S ++T
Sbjct: 412 SDTGIQPTIITGLD-----ALSRNSDLENLMRALQQLLIVSQIVAGGGPLSV--TLNTTS 464
Query: 482 VSRFSLWATNTPAVLIRDTAEVEDI----RQQREVQRRVMEEQHLQQQLQ 527
++ A + E + Q R+ + QQ
Sbjct: 465 IAASIFAGNGVDADTYVNDQETQQALMEQEQARQESLAAAPNRARNQQGA 514
>gi|289976621|gb|ADD21666.1| head-to-tail joining protein [Caulobacter phage Cd1]
Length = 509
Score = 57.7 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 63/501 (12%), Positives = 125/501 (24%), Gaps = 61/501 (12%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEE-----LTGFLYPYKNNAQ-LRMWDTT---GSEACIK 56
AK R++ L N+R +E + P + + T G +A
Sbjct: 4 AKQASARWSQLDNKRRGFIERLETYASWTIAKLCTPSGYDQNHSELSHGTQAVGGQAVNH 63
Query: 57 LSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRS 116
L++ + + P + + L S + + R
Sbjct: 64 LANKIMLALFAPSRPFFRLDPSDKMQKELAAANVNEQALA---LILSQGEKRAIQALDRM 120
Query: 117 GFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVY 176
L +++ G D + + + V
Sbjct: 121 ALRPKLYEAIKNLIVLGNVMLEFTKDTMRVIG----------IKRYCVRRSASGEV---- 166
Query: 177 REFTFTVDQIVSKWGDKVLSSKMKSALARN-----ENERFTIIHAVYPKSLTDKKKDKG- 230
+ + L ++ R E+ ++ + + D + +
Sbjct: 167 --LELIIKDTMQ---FDELEPSVQEECRRQGMRPLEDAEVSLYRWIVRQDNGDYRMTQHV 221
Query: 231 -NKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETV 289
N KF P+ V + + D YG + L
Sbjct: 222 DNIELSKKFQGKWSKDKL--------PFRVLTWDLSDDAHYGTGLVEDYRGDFAGLTMLS 273
Query: 290 NELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGR-SLFQPVQFGNPLPYHE 348
Q LS + + D + +G SL Q + +
Sbjct: 274 TAQVQAAILSSEFRWLVNPAGMTKPEDFRDSENGAAIPGVQGDVSLVQSGKAADLQVILS 333
Query: 349 ELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMIS 408
I FL+ + D +A E + E +G L +F M
Sbjct: 334 VNAEYINRIARGFLMG-SAMTRDAERVTAEEIRMQASELETSLGGAYSRLAVDFQIPM-- 390
Query: 409 RELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKT 468
++ EG D P + ++ S + + + + V LG T
Sbjct: 391 -AYWLMKKVDM--SIEGTDVEPSIVTGLDALS------RGGDLENLKLFLADVAGLG--T 439
Query: 469 GDPSCMDHMDTDRVSRFSLWA 489
P + + + + A
Sbjct: 440 LPPPVLAVLKVEPLLAAFATA 460
>gi|332800729|emb|CBY88569.1| hypothetical protein [Pantoea phage LIMEzero]
Length = 522
Score = 57.3 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 62/493 (12%), Positives = 155/493 (31%), Gaps = 58/493 (11%)
Query: 43 LRMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQ 102
R + + G+ L + L+ + P Q++ + Q + + +V +
Sbjct: 57 TRDYQSVGALLVNNLVARLAEFLFPSNQRFVRVKP-----QNLTDAQREKMGQVNQGLIL 111
Query: 103 VTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNV 162
+ T+ R ++ G+ +Q+ V G Y ++D + Y L N
Sbjct: 112 IEKTV-SERAKANGGYADLIQAIAHQAVT-GNVALYRDSDSE--------TYRVYGLENF 161
Query: 163 YMSVNHQNVV-DSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENE----RFTIIHAV 217
+ + + VV D++ I + L ++ ++ L + + ++
Sbjct: 162 VVQRDGRGVVVDAI----------IKERLQYDSLPAEFQAQLKAQNFQCGGNKRIWLYTR 211
Query: 218 YPKSLTDKK------KDKGNKGFHSKFVSVDENRFFEEKQIATFPYIVGRYRVRADEIYG 271
+ + GN S + + ++ EK P+I + +++ E YG
Sbjct: 212 VLRVKRGNNYGYEITQQIGNMS-GSVY--TPGDDYYPEK---VCPWIFPVWSLKSGEHYG 265
Query: 272 RSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAV-SEAKQRNFDLKPGYMNIGALSRE 330
R + RL+ A + + ++ + S + + I +
Sbjct: 266 RGIVEDHAGDFARLSMLSESSALYMQEAMRILWLLSGSGGNADDIEAAETGQVISLQTGT 325
Query: 331 GRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAF 390
+ + +E+ ++ + + F+ D +A E +
Sbjct: 326 KLEGVEVGDYQKVQQARDEIGQIVQRLSQAFMYT--GEFRDSERTTATEIQQVATSAERA 383
Query: 391 VGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPV--SLLKVEYTSPLFKYQQA 448
+G +Q++ L I + L E + P + +L+++ + L ++
Sbjct: 384 MGGPYS-MQAK--------TLQIPLAYVLLSEIDDTLVPDIVGKILELQVVAGLDALGRS 434
Query: 449 ESVASALQGVN-TVVELGVKTGDPSCMD-HMDTDRVSRFSLWATNTPAVLIRDTAEVEDI 506
+ +Q ++ + +D V + R + E
Sbjct: 435 IEASQLIQALSDAQAAIAAVANINQVAQGVLDPKAVLETIFSSNGVALDDYRTSPEELQA 494
Query: 507 RQQREVQRRVMEE 519
+ Q+ Q
Sbjct: 495 KAQQINQMTAEAG 507
>gi|115304377|ref|YP_762669.1| PfWMP4_39 [Cyanophage Pf-WMP4]
gi|113201871|gb|ABI33183.1| PfWMP4_39 [Phormidium phage Pf-WMP4]
Length = 641
Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 82/607 (13%), Positives = 164/607 (27%), Gaps = 90/607 (14%)
Query: 9 IQDRFNYLKNQRGELNYWMEELTGFLYPY---KNNAQLRMWDTTGSE------------- 52
+ ++ +++R + +E + N + R + TTG++
Sbjct: 29 VISKWQESRDKRNTVENNWDETYELYRASAIDRQNTRARNFQTTGADDADWRHRINTGHT 88
Query: 53 --ACIKLSSLLSSLITPPGQKWHGLAESFSAYQAF------LYKEDARSKKVREWCDQ-V 103
L + T P W L L K + +R+ + V
Sbjct: 89 FEVVETLVA-YFKGATFPSDDWFDLKGMVPELADAARVVKQLTKTKLEAASIRDIFETYV 147
Query: 104 TDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVY 163
+ + R G+ ++ + F DV +R + +V+
Sbjct: 148 RNLVLYGVSTYRLGWDTSMERQFKRTFVETGDIFGGWEDVAVNRQRSELRIEPLSPYDVW 207
Query: 164 MSVNHQNVVDSVYR-----------------EFTFT-VDQIVS-KWGDKVLSSKMKSALA 204
+ + + R + T V+Q V K+ D +
Sbjct: 208 LDTSGGKNTGTFVRLRHTREELHELVTSGYYDLDLTQVEQYVDYKFADPDTPKDVNGTDT 267
Query: 205 RNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQIATF---PYIVGR 261
+ II F + + P++
Sbjct: 268 SG----WDIIE-------YYGPLLVEGVQFWCVHAVFYGKQLIRLSDSKYWCGSPFVTTT 316
Query: 262 YRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEA--KQRNFDLKP 319
D +YG S L + LN N L ++ V + K+ + KP
Sbjct: 317 LLPDRDSVYGMSVLHPNLGALHVLNVLTNGRLDNLVLHINKMWTLVEDGILKREDVKAKP 376
Query: 320 GYMNIGALSREGRSLFQPVQFGNP-LPYHEELNRLKESIRSLFLLDLFQVLDDKA----- 373
G + QP+ G + +++ES S++ L A
Sbjct: 377 GAV----FKVAQHGSLQPIDMGRQDFVVTYQEAQVQES--SVYRNTSTGPLIGNAAPRGG 430
Query: 374 -SRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVS 432
+AAE G + + ++ ++++ +L PE P
Sbjct: 431 ERVTAAEIQGVRDAGGNRLSSVHTHIEDSSTLPLLNKVFSLLQQFYVTPETIRMYVPEEQ 490
Query: 433 LLKVEYTSP-------LFKYQQAESVASALQGVNTVVELGVKTGD-PSCMDHMDTDRVSR 484
+ SP F A V + V +++L +G P +D +
Sbjct: 491 MDGFFEVSPEYLHYPYKFLALGANYVVERERMVTDLLQLLDISGRVPQIGQSLDYALILE 550
Query: 485 FSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQL-QQTSQDIGAKAAGRAME 543
L +R T + I++ L + +G +A+
Sbjct: 551 DLLRQ-------MRFTDPMRYIKKAEAPPAAPPIAPAEPGALPPEMMNSVGGGLNDQAIA 603
Query: 544 KKLTHDM 550
D+
Sbjct: 604 GMTPEDV 610
>gi|320158420|ref|YP_004190798.1| head-to-tail joining protein [Vibrio vulnificus MO6-24/O]
gi|319933732|gb|ADV88595.1| head-to-tail joining protein [Vibrio vulnificus MO6-24/O]
Length = 437
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 66/459 (14%), Positives = 125/459 (27%), Gaps = 50/459 (10%)
Query: 67 PPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQSFY 126
PP + L S A L D++ + Q + E R L
Sbjct: 5 PPSHPFVRLGVSNE-LIAKLDLTDSKKGDLETALSQTEQLI--VTELERRALRSLLYEDI 61
Query: 127 TSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVDQI 186
++ G G Y+ + R+ L + + Q +
Sbjct: 62 KHLLVTGNGLLYVGSKES--------RF--YRLDKYVVERDDQGAPTRIVVCEKINFR-- 109
Query: 187 VSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTD--KKKDKGNKGFHSKFVSVDEN 244
L M+ A+ + P+ + + + S
Sbjct: 110 -------KLPDAMQFAIREKRRLKGD------PRKDLNLFTMIELKGDQWRSYQEVEGMR 156
Query: 245 RFFEEKQI--ATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHP 302
E P+IV E YGRS E + + L V + Q +
Sbjct: 157 VPDSESNYRKDRTPWIVCTMNRLDGEDYGRSFCEEHIGDMNTLESLVKAITQASIAASKV 216
Query: 303 PTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELN-RLKESIRSLF 361
+ A R L + + + + L ++ + F
Sbjct: 217 IFMVKPNASTRASTLSKAKNGDYIQGDREDVGCLQLDKAHDMAIAQNLKAEIQAGLSEAF 276
Query: 362 LLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLP 421
L+ V D +A E T+ +G L L +++ L ++ G LP
Sbjct: 277 LMS-SAVRRDAERVTAEEIRMMTQMLEESLGGLYSQLAQSLQLPLVNVLLGHMERDGILP 335
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDR 481
P+ + VE + ++ V+ V ++G + M
Sbjct: 336 HFPEGTFEPIVITGVEGLG------REAELSRLNTFVSLVQQVGAEQAAKE----MHLGE 385
Query: 482 VSRFSLWATNTPAV-LIRDTAEVEDIRQQREVQRRVMEE 519
+ + L++ E +Q+E+Q M +
Sbjct: 386 LFKRYAANLQIETKGLMKTAEE-----KQQELQAEQMNQ 419
>gi|229604951|ref|YP_002875651.1| putative head-tail connector protein [Vibrio phage VP93]
gi|227976996|gb|ACP44098.1| putative head-tail connector protein [Vibrio phage VP93]
Length = 510
Score = 55.4 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 59/496 (11%), Positives = 142/496 (28%), Gaps = 62/496 (12%)
Query: 15 YLKNQRGELNYWMEELTGFLYPYKNNAQLRM---WDTTGSEACIKLSSLLSSLITPPGQK 71
L ++R T F K+ ++ + + + G+ L+S L+ + P G
Sbjct: 20 TLSSERYAF---WTVPTVFTRENKDGERVSLQRDFQSHGAMLVNNLASKLTRTLFPTGMS 76
Query: 72 WHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVE 131
+ ++++ + + + + + ++ + GF ++
Sbjct: 77 FFRISDTDK-MREIIAQLGSENAQLSAVFTGIEREAMTLLTTHA-GFAQLTHLMKL-LII 133
Query: 132 FGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVV-DSVYREFTFTVDQIVSKW 190
G Y + R + + + + V ++ RE +
Sbjct: 134 TGNALLYRDPLTG--------RMTVYSVRDYAVRRDGAGRVLCTILRE----------RV 175
Query: 191 GDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDENRFFEEK 250
+ + + + + + + + D +D
Sbjct: 176 PIQDVPEEFRPTGYTDPTTDVWLYTKIQ-RETRDAGDVFV------ITQQIDGKPVGTLS 228
Query: 251 QIAT--FPYIVGRYRVRADEIYGRSPAME---ALPTIRRLNETVNELAQFGRLSLHPPTI 305
PYI + + + E YGR + A + L + + ++ +
Sbjct: 229 VYPEKLCPYIPAVWNLVSGEHYGRGHVEDHAGAFARVSELTQALTLYEIEAMRVVN--LV 286
Query: 306 AVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDL 365
+ + A EG + + +L + + F+
Sbjct: 287 SPKSTADVDALNDAETGEYVAGDGEGIKAHEAGEARKIAEVVNDLQMVLAELARAFMYT- 345
Query: 366 FQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEG 425
+ D +A E RE +G + L +E + ++ L + PE
Sbjct: 346 -GNVRDAERVTAEEIKNNVREAEENMGGIYATL-AEILHIPLAHILTVEAR----PELLA 399
Query: 426 ADNPPVSLLKVEY-TSPLFKY---QQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDR 481
L ++ T+ + + Q+ VA+ + + V+ K +P DR
Sbjct: 400 LLQANAVSLDIQVGTAAINRSIVVQRLGLVANDINLILPVLAQATKRTNP--------DR 451
Query: 482 VSRFSLWATNT-PAVL 496
V L P +
Sbjct: 452 VIDLILAGHGVDPTEI 467
>gi|291334412|gb|ADD94067.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C1035]
Length = 64
Score = 55.4 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 3 QRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQL 43
AK + RF+ LK+QR +E+ ++ P K +
Sbjct: 4 SEKAKILLSRFDRLKSQRQNWESHWQEVADYMQPRKADVTK 44
>gi|57237581|ref|YP_178595.1| hypothetical protein CJE0579 [Campylobacter jejuni RM1221]
gi|57166385|gb|AAW35164.1| hypothetical protein CJE0579 [Campylobacter jejuni RM1221]
Length = 512
Score = 55.0 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 70/518 (13%), Positives = 162/518 (31%), Gaps = 64/518 (12%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGF-------LYPYKNNAQLRMWDTTGSEAC 54
N + + K+ +EL + + + ++
Sbjct: 7 NDERVSFLTQLISESKSGYENYKPHFKELQDAYLLENKVMQKLRKRNKSSIYIP------ 60
Query: 55 IKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERS 114
K+++ + LIT + +E + + ++ +D + W + +
Sbjct: 61 -KINAKVKYLITSLNDVYFN-SERMADIETYINSDD---TIIELWQNAID------FYSG 109
Query: 115 RSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEE----GIRYISVPLSNVYMSVNHQN 170
+ Q + V+ GT + +E I + L+ S +
Sbjct: 110 KINMFKIFQPLFLDVLLVGTSIAKVTWHKGMPRIERVDIDSIFFDPNALN----SEDVGY 165
Query: 171 VVDSVYREFTFTVDQI--VSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKD 228
+V+ +Y T +QI K G + K +E ++ + +Y + D+
Sbjct: 166 IVNEIY----LTYNQIHERQKLGFYKKNEIKKLFDEDDEYKKVKLYD-IYERKNDDEWVV 220
Query: 229 KGNKGFHSKFVSVD---ENRFFEEKQIATFPYIVGRYRVRADE----IYGRSPAMEALPT 281
S + ++ Q + ++ + + +E YG A+P
Sbjct: 221 -------STLFENNLLRNEVTLQDGQPFIWGSMLPQLKKIDNENYVSAYGEPIMASAMPL 273
Query: 282 IRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG 341
+N T N L R + P + D++ I +G + P
Sbjct: 274 QDEINITRNLLIDAVRTHIMPKIMMPKSMGVSREDIETLGKPIYTDDPKGVQILPPPNVN 333
Query: 342 NPLPYHEELN-RLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQS 400
+ + L L E I + Q ++ +A E K +E G +
Sbjct: 334 SAGMNLQLLESELTEVIGVSPQNNGAQTAQNE---TATEISIKAQEGGRR-SADYIRQYN 389
Query: 401 E-FIGAMISRELDILDSQGN--LPECEGADNPPVSLLKVEY-TSPLFKYQQAESVASALQ 456
E FI + R ++ G ++ P K++ T + K + + +++Q
Sbjct: 390 ETFIEPLFDRFAMLVFKYGEDSFFNGFQREDIPSFRFKIQTGTGAMNKEIRRAGIQASMQ 449
Query: 457 GVNTVVELGVKTGDPS-CMDHMDT-DRVSRFSLWATNT 492
+ + ++ + GD + ++ +++ L
Sbjct: 450 VFSQLYQMYMSIGDANSAYGIINASKELTKELLPILGV 487
>gi|149408206|ref|YP_001294640.1| hypothetical protein ORF047 [Pseudomonas phage PA11]
Length = 584
Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/295 (13%), Positives = 85/295 (28%), Gaps = 22/295 (7%)
Query: 252 IATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAK 311
+ P +R R D ++ P + R++ N A L + PP + E
Sbjct: 299 FGSAPIYHVGWRFRPDNLWAMGPLDNLVGMQYRIDHLENAKADAVDLIIQPPLKIIGEV- 357
Query: 312 QRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQV-LD 370
F PG + + + + V + ++ + + + + +
Sbjct: 358 -EEFVWGPGAEIHLDQGGDVQEIAKNVNYIINADNQIQMLEDRMELYAG--APREAMGIR 414
Query: 371 DKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPP 430
++A E + G + + E + +++ L+ +
Sbjct: 415 TPGEKTAFEVQQLGNAAGRIFQEKVTTFEVELLEPVLNAMLETATRNM---DGSDVIRVM 471
Query: 431 VSLLKV-EYTSPL---------FKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTD 480
+ L V E+ S + A Q + +V + + H
Sbjct: 472 DTDLGVKEFMSVTREDITANGKIRPIGARHFGKQAQDLQNLVGIFNSQIGQMILPHTSGK 531
Query: 481 RVSRFSLWATNTPA-VLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIG 534
++ F T + R V +Q E Q V + Q Q Q +
Sbjct: 532 ALATFVDDVTGLQGYEIFRPNVAVA---EQAETQSLVAQAQEDLQLQAQMPAEGA 583
>gi|308071876|emb|CBW54797.1| putative head-tail connector protein [Pantoea phage LIMElight]
Length = 529
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 52/464 (11%), Positives = 124/464 (26%), Gaps = 48/464 (10%)
Query: 44 RMWDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQV 103
R + + G+ L+S ++ + P + + ++ Q + ++
Sbjct: 52 RDYQSKGAMLVNNLASKVTQALFPQNNAFFEIGQTAEMLQVAQEMGADAKQAASKFAGIE 111
Query: 104 TDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVY 163
+ L ++ G Y + + + + + +
Sbjct: 112 VRASARVFLNAG---YSALSHAMKLLIITGNALVYRDPTNKQ--------FHTYSVRDYV 160
Query: 164 MSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLT 223
+ + V + + + + + LS + + E T+ V
Sbjct: 161 VKRDGSGKVLCLILKERIALQDLPEDF---RLS---RLQYRTDPFEDVTLYTKV------ 208
Query: 224 DKKKDKGNKGFHSKFVSVDENRFFEEKQIATF--PYIVGRYRVRADEIYGRSPAMEALPT 281
+K G + + V++ + PYI + + E YGR +
Sbjct: 209 -TRKHNGARVMYEVTQEVEDYPIGTPSTYPEYLCPYIPLTWNLVTGENYGRGHVEDFAGD 267
Query: 282 IRRLNETVNELAQFGRLSLH-------PPTIAVSEAKQRN-FDLKPGYMNIGALSREGRS 333
RL+E + + I + + + G N G
Sbjct: 268 FARLSELSESSLLYEVEMMRLINIIDPGAGIDLDDFMDADCGKAVAGKSNAAG---NGVV 324
Query: 334 LFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGP 393
+ ++ L + + F+ D +A E E +G
Sbjct: 325 AHEGGNAQKLAAVQNDIANLVQQLSIAFMYT--GNTRDAERVTAEEIRANVSEANQTLGG 382
Query: 394 LIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVAS 453
+ L SE + ++ L + + P L V L + +V
Sbjct: 383 VYANL-SEVLHLQLAHILSVEEE----PALLQLLMVQGIKLDVSVG--LASLNRQANVER 435
Query: 454 ALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLI 497
LQ + +++ + S + D + +
Sbjct: 436 -LQYLANALQIVLPVLTQSS-KRFNPDLIIDAMCQGYGVDREAL 477
>gi|157828580|ref|YP_001494822.1| hypothetical protein A1G_04000 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|157801061|gb|ABV76314.1| hypothetical protein A1G_04000 [Rickettsia rickettsii str. 'Sheila
Smith']
Length = 59
Score = 52.7 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 101 DQVTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEAD 142
+ + S F + F+ ++ FGT FY+E D
Sbjct: 4 QMIEKAIMDIFNNPASNFYNQIHQFFLNLAAFGTAIFYVEED 45
>gi|315929405|gb|EFV08607.1| hypothetical protein CSS_1407 [Campylobacter jejuni subsp. jejuni
305]
Length = 512
Score = 50.0 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 67/517 (12%), Positives = 157/517 (30%), Gaps = 62/517 (11%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGF-------LYPYKNNAQLRMWDTTGSEAC 54
N + + K+ +EL + + + ++
Sbjct: 7 NDERVSFLTQLISESKSGYENYKPHFKELQDAYLLENKVMQKLRKRNKSSIYIP------ 60
Query: 55 IKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERS 114
K+++ + LIT + +E + + ++ +D + W + +
Sbjct: 61 -KINAKVKYLITSLNDVYFN-SERMADIETYINSDD---TIIELWQNAID------FYSG 109
Query: 115 RSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEE----GIRYISVPLSNVYMSVNHQN 170
+ Q + V+ GT + +E I + L+ S +
Sbjct: 110 KINMFKIFQPLFLDVLLVGTSIAKVTWHKGMPRIERVDIDSIFFDPNALN----SEDVGY 165
Query: 171 VVDSVYREFTFTVDQI--VSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKD 228
+V+ +Y T +QI K G K +E ++ + +Y + D+
Sbjct: 166 IVNEIY----LTYNQIHERQKLGFYKKIEIKKLFDEDDEYKKVKLYD-IYERKNDDEWVV 220
Query: 229 KGNKGFHSKFVSVD---ENRFFEEKQIATFPYIVGRYRVRADE----IYGRSPAMEALPT 281
S + ++ Q + ++ + + +E YG A+P
Sbjct: 221 -------STLFENNLLRNEVTLQDGQPFIWGSMLPQLKKIDNENYVSAYGEPIMASAMPL 273
Query: 282 IRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG 341
+N T N L R + P + D++ I +G + P
Sbjct: 274 QDEINITRNLLIDAVRTHIMPKIMMPKSMGVSREDIETLGKPIYTDDPKGVQILPPPNVN 333
Query: 342 NPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
+ + L E + + +A E K +E G +E
Sbjct: 334 SAGMNLQLLE--SELTEVTGVSPQNNGAQTAQNETATEISIKAQEGGRR-SADYIRQYNE 390
Query: 402 -FIGAMISRELDILDSQGN--LPECEGADNPPVSLLKVEY-TSPLFKYQQAESVASALQG 457
FI + R ++ G ++ P K++ T + K + + +++Q
Sbjct: 391 TFIEPLFDRFAMLVFKYGEDSFFNGFQREDIPSFRFKIQTGTGAMNKEIRRAGIQASMQV 450
Query: 458 VNTVVELGVKTGDPS-CMDHMDT-DRVSRFSLWATNT 492
+ + ++ + GD + ++ +++ L
Sbjct: 451 FSQLYQMYMSIGDANSAYGIINASKELTKELLPILGV 487
>gi|281306687|ref|YP_003345493.1| predicted phage head-tail connector protein [Pseudomonas phage
phi-2]
gi|271277992|emb|CBH51598.1| predicted phage head-tail connector protein [Pseudomonas phage
phi-2]
Length = 518
Score = 50.0 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 60/474 (12%), Positives = 142/474 (29%), Gaps = 61/474 (12%)
Query: 46 WDTTGSEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYK--EDARSKKVREWCD-Q 102
+ + G+ L++ L + + P G + S + A + + + + D +
Sbjct: 51 FQSVGALLTNNLTAKLVASLFPSGVPFFKNMPSKTLLAAAVEQSINEQEVNNMLARLDRE 110
Query: 103 VTDTLFGFRERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNV 162
T+ LF ++ L ++ G Y + + + +
Sbjct: 111 ATERLFVQATTAK------LTRLLKLLIITGNALAYRDPKTGKM--------TVWSIRSY 156
Query: 163 YMSVNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNEN---------ERFTI 213
+ +R QI ++ L +++ + + FT+
Sbjct: 157 VVRRAADGE----FRHVVL--KQI-MRF--DELPEHVQADYTAKKPGQYKPDRMMDYFTV 207
Query: 214 IHAVYPKSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQIATF--PYIVGRYRVRADEIYG 271
I K+ NK + +D R E P+IV + + E YG
Sbjct: 208 IE---------KQPGAVNKRVV-VWNEIDGLRVGPESSYPEHLAPWIVTVWNLADGEHYG 257
Query: 272 RSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFD--LKPGYMNIGALSR 329
R + +++ +L + +L V E+ D + +
Sbjct: 258 RGLVEDFTGDFAKVSLVSEQLGLYELEALS-LLNVVDESAGGVIDEYQESDTGDYVRGKT 316
Query: 330 EGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGA 389
+ ++ + E + + + + F+ +A E +E +
Sbjct: 317 AAITSYERGDYNKINAVRESIGEVIQRLSMAFMYT--GNTRQAERVTAEEIRAVAKEAES 374
Query: 390 FVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAE 449
+G + L G + + D +L G + + L + + +
Sbjct: 375 TLGGVYSLLAETLQGPLAYLCM--ADVADDL--MMGLVTKQYKPVILTGIPALSRAVEMQ 430
Query: 450 SVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEV 503
++ +A Q + +V + D +D +V+ + + I EV
Sbjct: 431 NLLAATQEIAAIVP-ALTQLDT----RVDGSKVADLIYNSRSVDVSRIFKEPEV 479
>gi|153951607|ref|YP_001398216.1| hypothetical protein JJD26997_1133 [Campylobacter jejuni subsp.
doylei 269.97]
gi|153952365|ref|YP_001397542.1| hypothetical protein JJD26997_0326 [Campylobacter jejuni subsp.
doylei 269.97]
gi|152939053|gb|ABS43794.1| conserved hypothetical protein [Campylobacter jejuni subsp. doylei
269.97]
gi|152939811|gb|ABS44552.1| hypothetical protein JJD26997_0326 [Campylobacter jejuni subsp.
doylei 269.97]
Length = 507
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 64/507 (12%), Positives = 157/507 (30%), Gaps = 56/507 (11%)
Query: 9 IQDRFNYLKNQRGELNYWMEELTG-------FLYPYKNNAQLRMWDTTGSEACIKLSSLL 61
+ + K+ +EL + + + ++ K+++ +
Sbjct: 12 LTQLISESKSGYENYKPHFKELQDAYLLENKIMQKLRKRNKSSIYIP-------KINAKV 64
Query: 62 SSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGC 121
LIT + + +E + + ++ +D + W + + +
Sbjct: 65 KYLITSLNEVYFN-SERMADIETYINSDD---TIIELWQNAID------FYSGKINMFKI 114
Query: 122 LQSFYTSVVEFGTGCFYMEADVDEKGLEE----GIRYISVPLSNVYMSVNHQNVVDSVYR 177
Q + V+ GT + +E I + L+ S + +V+ +Y
Sbjct: 115 FQPLFLDVLLVGTSIAKLTWHKGMPRIERVGIDSIFFDPNALN----SEDVGYIVNEIY- 169
Query: 178 EFTFTVDQI--VSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFH 235
T ++I K G K +E ++ + +Y + D H
Sbjct: 170 ---LTYNEIYERQKLGFYKKLETPKLLDEEDEYKKVKLYD-IYERKNDDAWVVSTLFENH 225
Query: 236 SKFVSVDENRFFEEKQIATFPYIVGRYRVRADE----IYGRSPAMEALPTIRRLNETVNE 291
+ ++ Q + ++ + + +E YG A+P +N T N
Sbjct: 226 ----LLRNEVILQDGQPFVWGSMLPQLKKIDNENYVSAYGEPIMASAMPLQDEINITRNL 281
Query: 292 LAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELN 351
L R + P + D++ + +G + P + + L
Sbjct: 282 LIDAVRTHIMPKIMLPKSMGVSREDIETLGKPLYTDDPKGVQILPPPDVNSAGMNLQLLE 341
Query: 352 RLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE-FIGAMISRE 410
E + + +A E K +E G +E FI + R
Sbjct: 342 --SELTEVTGVSPQNNGAQTAHNETATEISIKAQEGGRR-SADYIRQYNETFIEPLFDRF 398
Query: 411 LDILDSQGN--LPECEGADNPPVSLLKVEY-TSPLFKYQQAESVASALQGVNTVVELGVK 467
++ G + ++ P K++ T + K + + +++Q + + ++ +
Sbjct: 399 AMLVFKYGEDNFFKGFQREDIPSFRFKIQTGTGAMNKEIRRAGIQASMQVFSQLYQMYMS 458
Query: 468 TGDPS-CMDHMDT-DRVSRFSLWATNT 492
GD + ++ +++ L
Sbjct: 459 IGDTNSAYGIINASKELTKELLPILGV 485
>gi|283956319|ref|ZP_06373799.1| hypothetical protein C1336_000250090 [Campylobacter jejuni subsp.
jejuni 1336]
gi|283792039|gb|EFC30828.1| hypothetical protein C1336_000250090 [Campylobacter jejuni subsp.
jejuni 1336]
Length = 512
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 66/517 (12%), Positives = 158/517 (30%), Gaps = 62/517 (11%)
Query: 2 NQRSAKDIQDRFNYLKNQRGELNYWMEELTGF-------LYPYKNNAQLRMWDTTGSEAC 54
N + + + K+ +EL + + + ++
Sbjct: 7 NDKRVSFLTQLISESKSGYENYKPHFKELQDAYLLENKVMQKLRKRNKSSIYIP------ 60
Query: 55 IKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERS 114
K+++ + LIT + +E + + ++ +D + W + +
Sbjct: 61 -KINAKVKYLITSLNDVYFN-SERMADIETYINSDD---TIIELWQNAID------FYSG 109
Query: 115 RSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEE----GIRYISVPLSNVYMSVNHQN 170
+ Q + V+ GT + +E I + L+ S +
Sbjct: 110 KINMFKIFQPLFLDVLLVGTSIAKVTWHKGMPRIERVDIDSIFFDPNALN----SEDVGY 165
Query: 171 VVDSVYREFTFTVDQIVSK--WGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKD 228
+V+ +Y T +QI + G K +E ++ + +Y + D+
Sbjct: 166 IVNEIY----LTYNQIHERQNLGFYKNIEIQKLFDEDDEYKKVKLYD-IYERKNDDEWVV 220
Query: 229 KGNKGFHSKFVSVD---ENRFFEEKQIATFPYIVGRYRVRADE----IYGRSPAMEALPT 281
S + ++ Q + ++ + + +E YG A+P
Sbjct: 221 -------STLFENNLLRNKVTLQDGQPFVWGSMLPQLKKIDNENYVSAYGEPIMASAMPL 273
Query: 282 IRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFG 341
+N T N L R + P + D++ I +G + P
Sbjct: 274 QDEINITRNLLIDAVRTHIMPKIMMPKSMGVSREDIETLGKPIYTDDPKGVQILPPPNVN 333
Query: 342 NPLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSE 401
+ + L E + + +A E K +E G +E
Sbjct: 334 SAGMNLQLLE--SELTEVTGVSPQNNGAQTAQNETATEISIKAQEGGRR-SADYIRQYNE 390
Query: 402 -FIGAMISRELDILDSQGN--LPECEGADNPPVSLLKVEY-TSPLFKYQQAESVASALQG 457
FI + R ++ G ++ P K++ T + K + + +++Q
Sbjct: 391 TFIEPLFDRFAMLVFKYGEDNFFNGFQREDIPSFRFKIQTGTGAMNKEIRRAGIQASMQV 450
Query: 458 VNTVVELGVKTGDPS-CMDHMDT-DRVSRFSLWATNT 492
+ + ++ + GD + ++ +++ L
Sbjct: 451 FSQLYQMYMSIGDANSAYGIINASKELTKELLPILGV 487
>gi|327273550|ref|XP_003221543.1| PREDICTED: dnaJ homolog subfamily C member 2-like [Anolis
carolinensis]
Length = 619
Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 41/111 (36%), Gaps = 6/111 (5%)
Query: 194 VLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFH--SKFVSVDENRFFEEKQ 251
L K + + ++F H V P++ ++ + S + + ++ E+
Sbjct: 506 KLDPHQKDDINKKAFDKFKKEHGVVPQADNATPSERFEAPYGDSSPWTTEEQK--LLEQA 563
Query: 252 IATFPYIVG-RYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLH 301
+ T+P R+ A + GRS + + + L E V ++
Sbjct: 564 LKTYPVNTPERWEKIAASVPGRS-KKDCMKRYKELVEMVKAKKAAQEQVVN 613
>gi|157828622|ref|YP_001494864.1| hypothetical protein A1G_04250 [Rickettsia rickettsii str.
'Sheila Smith']
gi|157801103|gb|ABV76356.1| hypothetical protein A1G_04250 [Rickettsia rickettsii str.
'Sheila Smith']
Length = 56
Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 1 MNQRSAKDIQDRFNYLKNQRGELNYWMEELTGFLYPYKNNAQLRMWDTTGSEAC 54
M+ + F+ LK++R + N +EL ++ P + ++D+T +
Sbjct: 1 MHDNELNKKIEYFDNLKSKREKWNQRWDELKRYVCP-QTERNKVIFDSTSIGSL 53
>gi|319956914|ref|YP_004168177.1| hypothetical protein Nitsa_1175 [Nitratifractor salsuginis DSM
16511]
gi|319419318|gb|ADV46428.1| hypothetical protein Nitsa_1175 [Nitratifractor salsuginis DSM
16511]
Length = 561
Score = 43.9 bits (102), Expect = 0.077, Method: Composition-based stats.
Identities = 71/428 (16%), Positives = 127/428 (29%), Gaps = 44/428 (10%)
Query: 73 HGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQSFYTSVVEF 132
+ + + EW + R + + +
Sbjct: 78 FAKLTPQVPTPESIKDVQKLQRALDEWTTK------------RINLYTRFKPSVLDALIY 125
Query: 133 GTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVY--REFTFTVDQIVSKW 190
GT + + +R V L N+Y+ N NV D Y T T+ + ++
Sbjct: 126 GTPIMKIYWADGQ------LRIERVKLKNMYLDPNASNVFDIQYCVHRVTTTIGNLRQQF 179
Query: 191 GDKVLSSKMKSALARNEN-----ERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDENR 245
G K K K+ + +E+ + A + D + + K + S + D
Sbjct: 180 GRKF---KWKNYIGDSEDGTSYLSSADLGDASRI-EVRDVYRYQSGKWYVSTVLPGDAFV 235
Query: 246 FFEEKQIATFPYIV----GRY----RVRADEIYGRSPAMEALPTIRRLNETVNELAQFGR 297
+E P+I+ ++ A E YG S +P T N+
Sbjct: 236 RLDEPLKDGLPFIIGSVEPQFVRLDESNAVEAYGGSFIEPMIPLQEEYTVTRNQQIDAIA 295
Query: 298 LSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESI 357
SL +A + DL I S Q + + + L+ + +
Sbjct: 296 ESLSKRFLATKTSGLNEKDLLSNRTKISVSSLNEVKELQAPRIDPSIFGIDRLDSEMQEV 355
Query: 358 RSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQ 417
+ + +++A T E A + ++ L F I R + ++
Sbjct: 356 SGITKYNQGLNDPHNLNQTATGVSILTEEGNAVIADIVRALNESFFEPAIRRMVRLIYKY 415
Query: 418 GNLPECEGADNPPVSLLKVE-------YTSPLFKYQQAESVASALQGVNTVVELGVKTGD 470
G P G D V + L A + +ALQ V EL
Sbjct: 416 GESPIFYGLDRTKDLRFYVTINAGVGAVNNELLLNNIAAAEGAALQNVKLAAELQDAERA 475
Query: 471 PSCMDHMD 478
MD +D
Sbjct: 476 KRYMDVLD 483
>gi|119703755|ref|NP_002283.3| laminin subunit beta-2 precursor [Homo sapiens]
gi|156630892|sp|P55268|LAMB2_HUMAN RecName: Full=Laminin subunit beta-2; AltName: Full=Laminin B1s
chain; AltName: Full=Laminin-11 subunit beta; AltName:
Full=Laminin-14 subunit beta; AltName: Full=Laminin-15
subunit beta; AltName: Full=Laminin-3 subunit beta;
AltName: Full=Laminin-4 subunit beta; AltName:
Full=Laminin-7 subunit beta; AltName: Full=Laminin-9
subunit beta; AltName: Full=S-laminin subunit beta;
Short=S-LAM beta; Flags: Precursor
gi|119585362|gb|EAW64958.1| laminin, beta 2 (laminin S), isoform CRA_a [Homo sapiens]
gi|119585363|gb|EAW64959.1| laminin, beta 2 (laminin S), isoform CRA_a [Homo sapiens]
gi|225000494|gb|AAI72384.1| Laminin, beta 2 (laminin S) [synthetic construct]
Length = 1798
Score = 43.5 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 72/219 (32%), Gaps = 25/219 (11%)
Query: 345 PYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKT-----REKGAFVGPLIGGLQ 399
++EL L +S++ L+ D A +E + + G + ++
Sbjct: 1507 QANQELQELIQSVKD--FLNQEGADPDSIEMVATRVLELSIPASAEQIQHLAGAIAERVR 1564
Query: 400 SEF-IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGV 458
S + A+++R + + L + K Q+AE+V +AL+
Sbjct: 1565 SLADVDAILARTVGDVRRAEQLLQDARRARSWAEDEK----------QKAETVQAALEEA 1614
Query: 459 NTVVELGVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVM 517
+ + D DT++ + + + E RQ + +
Sbjct: 1615 QRAQGIAQGAIRGAVADTRDTEQTLYQVQERMAGA-ERALSSAGERA--RQLDALLEALK 1671
Query: 518 EEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMMENSYG 556
++ T+++ A GRA E ++ G
Sbjct: 1672 LKRAGNSLAASTAEETAGSAQGRAQE---AEQLLRGPLG 1707
>gi|8170714|gb|AAB34682.2| laminin beta 2 chain [Homo sapiens]
Length = 1798
Score = 43.5 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 72/219 (32%), Gaps = 25/219 (11%)
Query: 345 PYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKT-----REKGAFVGPLIGGLQ 399
++EL L +S++ L+ D A +E + + G + ++
Sbjct: 1507 QANQELQELIQSVKD--FLNQEGADPDSIEMVATRVLELSIPASAEQIQHLAGAIAERVR 1564
Query: 400 SEF-IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGV 458
S + A+++R + + L + K Q+AE+V +AL+
Sbjct: 1565 SLADVDAILARTVGDVRRAEQLLQDARRARSWAEDEK----------QKAETVQAALEEA 1614
Query: 459 NTVVELGVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVM 517
+ + D DT++ + + + E RQ + +
Sbjct: 1615 QRAQGIAQGAIRGAVADTRDTEQTLYQVQERMAGA-ERALSSAGERA--RQLDALLEALK 1671
Query: 518 EEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMMENSYG 556
++ T+++ A GRA E ++ G
Sbjct: 1672 LKRAGNSLAASTAEETAGSAQGRAQE---AEQLLRGPLG 1707
>gi|1335202|emb|CAA56130.1| beta2/S laminin chain [Homo sapiens]
Length = 1798
Score = 43.5 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 72/219 (32%), Gaps = 25/219 (11%)
Query: 345 PYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKT-----REKGAFVGPLIGGLQ 399
++EL L +S++ L+ D A +E + + G + ++
Sbjct: 1507 QANQELQELIQSVKD--FLNQEGADPDSIEMVATRVLELSIPASAEQIQHLAGAIAERVR 1564
Query: 400 SEF-IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGV 458
S + A+++R + + L + K Q+AE+V +AL+
Sbjct: 1565 SLADVDAILARTVGDVRRAEQLLQDARRARSWAEDEK----------QKAETVQAALEEA 1614
Query: 459 NTVVELGVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVM 517
+ + D DT++ + + + E RQ + +
Sbjct: 1615 QRAQGIAQGAIRGAVADTRDTEQTLYQVQERMAGA-ERALSSAGERA--RQLDALLEALK 1671
Query: 518 EEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMMENSYG 556
++ T+++ A GRA E ++ G
Sbjct: 1672 LKRAGNSLAASTAEETAGSAQGRAQE---AEQLLRGPLG 1707
>gi|1103585|emb|CAA92279.1| laminin beta 2 chain [Homo sapiens]
Length = 1798
Score = 43.5 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 72/219 (32%), Gaps = 25/219 (11%)
Query: 345 PYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKT-----REKGAFVGPLIGGLQ 399
++EL L +S++ L+ D A +E + + G + ++
Sbjct: 1507 QANQELQELIQSVKD--FLNQEGADPDSIEMVATRVLELSIPASAEQIQHLAGAIAERVR 1564
Query: 400 SEF-IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGV 458
S + A+++R + + L + K Q+AE+V +AL+
Sbjct: 1565 SLADVDAILARTVGDVRRAEQLLQDARRARSWAEDEK----------QKAETVQAALEEA 1614
Query: 459 NTVVELGVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVM 517
+ + D DT++ + + + E RQ + +
Sbjct: 1615 QRAQGIAQGAIRGAVADTRDTEQTLYQVQERMAGA-ERALSSAGERA--RQLDALLEALK 1671
Query: 518 EEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMMENSYG 556
++ T+++ A GRA E ++ G
Sbjct: 1672 LKRAGNSLAASTAEETAGSAQGRAQE---AEQLLRGPLG 1707
>gi|332816911|ref|XP_003309859.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-2-like [Pan
troglodytes]
Length = 1792
Score = 43.5 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 33/224 (14%), Positives = 73/224 (32%), Gaps = 24/224 (10%)
Query: 341 GNPLPYHEELNRLKESIRSLF-LLDLFQVLDDKASRSAAESMEKT-----REKGAFVGPL 394
+ + L+E I+S+ L+ D A +E + + G +
Sbjct: 1494 ASRGQVEQANQELRELIQSVKDFLNQEGADPDSIEMVATRVLELSIPASAEQIQHLAGAI 1553
Query: 395 IGGLQSEF-IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVAS 453
++S + A+++R + + L + K Q+AE+V +
Sbjct: 1554 AERVRSLADVDAILARTVGDVRRAEQLLQDARRARSWAEDEK----------QKAETVQA 1603
Query: 454 ALQGVNTVVELGVKTGDPSCMDHMDTDR-VSRFSLWATNTPAVLIRDTAEVEDIRQQREV 512
AL+ + + D DT++ + + + E RQ +
Sbjct: 1604 ALEEAQRAQGIAQGAIRGAVADTRDTEQTLYQVQERMAGA-EQALSSAGERA--RQLDAL 1660
Query: 513 QRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMMENSYG 556
+ ++ T++++ A GRA E ++ G
Sbjct: 1661 LEALKLKRAGNSLAASTAEEMAGSAQGRAQE---AEQLLRGPLG 1701
>gi|310829195|ref|YP_003961552.1| anaerobic ribonucleoside-triphosphate reductase [Eubacterium
limosum KIST612]
gi|308740929|gb|ADO38589.1| anaerobic ribonucleoside-triphosphate reductase [Eubacterium
limosum KIST612]
Length = 774
Score = 42.3 bits (98), Expect = 0.24, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 58/189 (30%), Gaps = 29/189 (15%)
Query: 54 CIKLSSLLSSLITP--PGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFR 111
++ L + TP P Q + E + + D + + LF
Sbjct: 370 LKATAAGLGNGETPIFPVQI-FKVKEGIN-----YNETDPNYDLFKLAIKTSSMRLFPNF 423
Query: 112 ERSRSGFVGCLQS---FYTSVVEFG--TGCFY--MEADVDEKGLEEGIRYISVPLSNVYM 164
+ F + T V G T + + + + S+ L + +
Sbjct: 424 SFLDAPFNLQYYEEGDYNTEVAYMGCRTRVMGNHYDPQNETTCGRGNLSFTSINLPRIAL 483
Query: 165 SVNHQNVVDSVYR----EFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPK 220
N +D+ YR + V Q++ ++ A R N F + V+
Sbjct: 484 ESN--GSLDTFYRLLDERVSLVVKQLLHRFKI--------QAAKRGRNYPFLMGQGVWID 533
Query: 221 SLTDKKKDK 229
S + + D+
Sbjct: 534 SESLGRDDR 542
>gi|134300245|ref|YP_001113741.1| flagellar biosynthesis/type III secretory pathway protein-like
protein [Desulfotomaculum reducens MI-1]
gi|134052945|gb|ABO50916.1| Flagellar biosynthesis/type III secretory pathway protein-like
protein [Desulfotomaculum reducens MI-1]
Length = 238
Score = 41.9 bits (97), Expect = 0.31, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 42/133 (31%), Gaps = 9/133 (6%)
Query: 419 NLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMD 478
LP + L E L + Q AE + A Q +++ +
Sbjct: 21 ELPPPPSEEVNQEKQLSPEEIMVLAQQQAAEMINRAKQEAKQIIQQTQSKAEAEA----- 75
Query: 479 TDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEE--QHLQQQLQQTSQDIGAK 536
R R + AE E IRQQ R +E + +++ D+
Sbjct: 76 --RQMREQAKQAGWQEGITASQAEAEKIRQQASDVLRQSKEIYRQTLGKMEAEIVDLAVD 133
Query: 537 AAGRAMEKKLTHD 549
A R + +L +
Sbjct: 134 IAERVVLTQLAVE 146
>gi|239907145|ref|YP_002953886.1| hypothetical protein DMR_25090 [Desulfovibrio magneticus RS-1]
gi|239797011|dbj|BAH76000.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 682
Score = 41.6 bits (96), Expect = 0.39, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 13/129 (10%)
Query: 427 DNPPVSLLKVEYTSPLFK-----YQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDR 481
D P +K ++ S + + + +Q + +P +D ++
Sbjct: 520 DFNPRPDIKGDF-SVVARGATALMSKEVQSQRLIQFMTMCAS------NPQFAPMLDVNK 572
Query: 482 VSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRA 541
R + PA ++ D A VE + Q+R++ +V EQ + + S + A
Sbjct: 573 GLRQVATSMQIPADIVYDQATVE-LNQERQMAMQVRIEQATKLETLLNSMNSRGITPDAA 631
Query: 542 MEKKLTHDM 550
+++ L +
Sbjct: 632 LQRMLAEAL 640
>gi|220916211|ref|YP_002491515.1| integrase family protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219954065|gb|ACL64449.1| integrase family protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 466
Score = 40.8 bits (94), Expect = 0.57, Method: Composition-based stats.
Identities = 63/376 (16%), Positives = 118/376 (31%), Gaps = 47/376 (12%)
Query: 166 VNHQNVVDSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTI--IHAVYPKSLT 223
+ VD TV QI ++ +LS + ++ +E + + +H V +
Sbjct: 89 EEKRGEVDGTAER---TVAQIAQQYRTDILSHRERA------DEAWNVIRVHVVE--AQP 137
Query: 224 DKKKDKGNKGFHSKFVSVDENRFFEEKQIATF-PYIVGRYRVRADEIYGRSPAMEALPTI 282
D K+ + + + D + P + + I G A L
Sbjct: 138 DPKRLSFGEWVARQVKASDVATVVRHAKRQRMVPATTRKGEMMTRRIGGAGAARVVL--- 194
Query: 283 RRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGN 342
R L + G L P +A + + Y+ G + ++ F ++
Sbjct: 195 RELKSIFAHAVETGDLDASPAVVAKTRTFGIRATSRSRYLKAGEV----KAFFDALELTA 250
Query: 343 PLPYHEELNRLKESIRSLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGL---- 398
L + RL ++R L+ L ++ A K V P+ G L
Sbjct: 251 LLDGTAKRQRLSPTMRLALAFQLYVPLRSQSLIGAQWIEIDLDAKRWTVPPVAGRLKMRK 310
Query: 399 ----QSE-FIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQ--QAESV 451
++E F+ + S + +L E A + P L SPL + + +A++V
Sbjct: 311 EEREEAEGFVVPLPSTAVAMLKRL-----REEAGDSPWVL-----ASPLDRKRHIEAKAV 360
Query: 452 ASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTP-AVLIRDTAEVEDIRQQR 510
AL + T L + + D R R R V +R
Sbjct: 361 VRALSRLQTGDRLALGSRVT----VHDLRRTWRTFAMDLGVDNVTAERSLGHVAVLRASG 416
Query: 511 EVQRRVMEEQHLQQQL 526
+ + +
Sbjct: 417 FGGAADVYGRAQMVEQ 432
>gi|296225177|ref|XP_002758379.1| PREDICTED: laminin subunit beta-2 [Callithrix jacchus]
Length = 1798
Score = 40.8 bits (94), Expect = 0.58, Method: Composition-based stats.
Identities = 32/224 (14%), Positives = 69/224 (30%), Gaps = 24/224 (10%)
Query: 341 GNPLPYHEELNRLKESIRSL-FLLDLFQVLDDKASRSAAESMEKT-----REKGAFVGPL 394
+ + L+E I+S+ L+ D A +E + + G +
Sbjct: 1500 ASRGQVEQANQELRELIQSVKAFLNQEGADPDSIEMVATRVLELSIPASAEQIQHLAGAI 1559
Query: 395 IGGLQSEF-IGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVAS 453
++S + +++R + + L + K Q+AE+V +
Sbjct: 1560 AERVRSLADVDVILARTVGDVRRAEQLLQDARRARSRAENEK----------QKAETVQA 1609
Query: 454 ALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQ 513
AL+ + + D DT++ + E QQ +
Sbjct: 1610 ALEEAQRAQGVAQGAIWGAVADTQDTEQTLHQVQERMAGAEQALSSAGERA---QQLDAL 1666
Query: 514 RRVMEEQHLQQQ-LQQTSQDIGAKAAGRAMEKKLTHDMMENSYG 556
++ + T+++ A GRA E ++ G
Sbjct: 1667 LEALKLKRAGNSLAASTAEETAGSAQGRAQE---AEKLLRGPLG 1707
>gi|300712297|ref|YP_003738111.1| hypothetical protein HacjB3_14700 [Halalkalicoccus jeotgali B3]
gi|299125980|gb|ADJ16319.1| hypothetical protein HacjB3_14700 [Halalkalicoccus jeotgali B3]
Length = 421
Score = 40.8 bits (94), Expect = 0.65, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 60/176 (34%), Gaps = 15/176 (8%)
Query: 60 LLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFV 119
+S IT P E+ + + + A+ W + + + S +
Sbjct: 121 GTASEITHPHAP--LSGEATPVLEDLIDYQTAQYVDFHAWLGR-----YALFDASLIDYE 173
Query: 120 GCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREF 179
+ +V FGT + + + + + + + + N + Y E+
Sbjct: 174 SQIPDLLAAVDAFGTAAITLFTESSVRSHQVLVYDYERSPGRLVLFAYNPNYTAATYEEY 233
Query: 180 TFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFH 235
T+TV+ V G + + A ++F +H Y +++ +++ G
Sbjct: 234 TYTVE--VDTSGASPVPRPTEHA----GYDQF--VHNEYDRAIRTRRESAGAGPLA 281
>gi|332715438|ref|YP_004442904.1| Threonine dehydratase [Agrobacterium sp. H13-3]
gi|325062123|gb|ADY65813.1| Threonine dehydratase [Agrobacterium sp. H13-3]
Length = 339
Score = 40.4 bits (93), Expect = 0.76, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 56/159 (35%), Gaps = 23/159 (14%)
Query: 407 ISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGV 466
+ R L L E G LK+E P+ ++ ++ + L +T + G+
Sbjct: 36 VERT--PLVRSDFLSERCGH----PVHLKLETLQPIGAFKLRGAMNAILSLDDTTRQRGL 89
Query: 467 KTGDPSCMDHMDTDRVSRFSLWATNTPAVL----IRDTAEVEDIRQQREVQR---RVMEE 519
T + R ++ PA + + +VE IR R R ++
Sbjct: 90 VTASTG-----NHGRAVAYAADKLGIPATICMSALVPANKVEAIRALGAEIRIVGRSQDD 144
Query: 520 QHLQQQLQQTSQDIGAK-----AAGRAMEKKLTHDMMEN 553
+ + S+ + A A A + + +++EN
Sbjct: 145 AQEEVERLTKSRGLTAIPPFDHADVVAGQGTIGLEVVEN 183
>gi|126340420|ref|XP_001364805.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 621
Score = 40.4 bits (93), Expect = 0.77, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 2/109 (1%)
Query: 194 VLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDKGNKGFHSKFVSVDENRFFEEKQIA 253
L K + + ++F H V P S + ++ E + E+ +
Sbjct: 508 KLDPHQKDDINKKAFDKFKKEHGVVPHSDSAAPSERFEGLCTDFIPWTTEEQKLLEQALK 567
Query: 254 TFPYIVG-RYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLH 301
T+P R+ A + GRS + + + L E V ++
Sbjct: 568 TYPVNTPERWEKIASTVPGRS-KKDCMKRYKELVEMVKAKKAAQEQVMN 615
>gi|296283404|ref|ZP_06861402.1| peptidase, M16 family protein [Citromicrobium bathyomarinum JL354]
Length = 945
Score = 40.4 bits (93), Expect = 0.83, Method: Composition-based stats.
Identities = 54/328 (16%), Positives = 91/328 (27%), Gaps = 40/328 (12%)
Query: 74 GLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGFRERSRSGFVGCLQS--FYTSVVE 131
G + SA L AR + R + + + + F + + S
Sbjct: 291 GSGSADSAALDVLTAIMARGQSSRLY----DALVRTGKAVDSAMFYSESEEGGYVASFAV 346
Query: 132 FGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQNVVDSVYREFTFTVDQIVSKWG 191
E D K E IR V + + + DS+ R T + G
Sbjct: 347 TNPTADADEVDALLKAELEKIRTQPVSAAELA-EAKSELFADSLRRRE--TARGRAFELG 403
Query: 192 DKVLSSKMKSALARNENERFTIIHAVYPKS--LTDKKKDKGNKGFHSKFVSVDENRFFEE 249
+ ++S+ A ++R I AV P+ K N ++V+ +EN
Sbjct: 404 EALVSTGNPRAA----DDRLAAIAAVTPEDVQRAAAKWLASNARVDMRYVAGEENPE--- 456
Query: 250 KQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSE 309
P + +R + LP R A R PT+ E
Sbjct: 457 --AYANPVPMPTFRSLPA---ATGEPLSVLPEGER----QQPPAAGAR-----PTVVAPE 502
Query: 310 AKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLDLFQVL 369
++ + G ++ P+ L +
Sbjct: 503 IVEQ-------TLTNGIDVVAAQTGEVPIATMTVLVPGGASTDTRAKAGVAQFA-ASLAD 554
Query: 370 DDKASRSAAESMEKTREKGAFVGPLIGG 397
A+ SA E + GA G G
Sbjct: 555 QGTANMSAQEIAARLESLGASFGATAGR 582
>gi|229845187|ref|ZP_04465321.1| potassium efflux protein KefA [Haemophilus influenzae 6P18H1]
gi|229811898|gb|EEP47593.1| potassium efflux protein KefA [Haemophilus influenzae 6P18H1]
Length = 1107
Score = 40.4 bits (93), Expect = 0.84, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 19/149 (12%)
Query: 411 LDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGD 470
+ SQG L P LK + L Q+ + + + +
Sbjct: 16 FTLSVSQGVLGANSTNVLPTEQSLKAD----LANAQKMSEGEAKKRLLAELQTSIDLLQQ 71
Query: 471 PSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRV---MEEQHLQQ--- 524
++ D + + + + ++ AE++ +++Q+E + Q Q
Sbjct: 72 IQAQQKIN-DALQTTLSHSE---SEIRKNNAEIQALKKQQETATSTDYNAQSQDDLQNSL 127
Query: 525 -----QLQQTSQDIGAKAAGRAMEKKLTH 548
QLQ T +GA A A + ++
Sbjct: 128 AKLNDQLQDTQNALGAANAQLAGQNSISE 156
>gi|145635631|ref|ZP_01791328.1| potassium efflux protein KefA [Haemophilus influenzae PittAA]
gi|145267104|gb|EDK07111.1| potassium efflux protein KefA [Haemophilus influenzae PittAA]
Length = 1112
Score = 40.4 bits (93), Expect = 0.84, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 19/149 (12%)
Query: 411 LDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGD 470
+ SQG L P LK + L Q+ + + + +
Sbjct: 21 FTLSVSQGVLGANSTNVLPTEQSLKAD----LANAQKMSEGEAKKRLLAELQTSIDLLQQ 76
Query: 471 PSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRV---MEEQHLQQ--- 524
++ D + + + + ++ AE++ +++Q+E + Q Q
Sbjct: 77 IQAQQKIN-DALQTTLSHSE---SEIRKNNAEIQALKKQQETATSTDYNAQSQDDLQNSL 132
Query: 525 -----QLQQTSQDIGAKAAGRAMEKKLTH 548
QLQ T +GA A A + ++
Sbjct: 133 AKLNDQLQDTQNALGAANAQLAGQNSISE 161
>gi|39794437|gb|AAH64251.1| dnajc2-prov protein [Xenopus (Silurana) tropicalis]
Length = 635
Score = 40.4 bits (93), Expect = 0.91, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 3/110 (2%)
Query: 194 VLSSKMKSALARNENERFTIIHAVYPKS-LTDKKKDKGNKGFHSKFVSVDENRFFEEKQI 252
L + K + + ++F H V P+S ++ E + E+ +
Sbjct: 521 KLDPQQKDDINKKAFDKFKKEHRVVPQSVDNAVPSERFEGPAADMSPWTTEEQKLLEQAL 580
Query: 253 ATFPYIVG-RYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLH 301
T+P R+ A+ + GRS + + + L E V L+
Sbjct: 581 KTYPVNTPERWEKIAEAVPGRS-KKDCMKRYKELVEMVKAKKAAQEQVLN 629
>gi|313747464|ref|NP_001186412.1| dnaJ homolog subfamily C member 2 [Xenopus (Silurana) tropicalis]
gi|325530079|sp|Q6P2Y3|DNJC2_XENTR RecName: Full=DnaJ homolog subfamily C member 2
Length = 620
Score = 40.0 bits (92), Expect = 0.96, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 3/110 (2%)
Query: 194 VLSSKMKSALARNENERFTIIHAVYPKS-LTDKKKDKGNKGFHSKFVSVDENRFFEEKQI 252
L + K + + ++F H V P+S ++ E + E+ +
Sbjct: 506 KLDPQQKDDINKKAFDKFKKEHRVVPQSVDNAVPSERFEGPAADMSPWTTEEQKLLEQAL 565
Query: 253 ATFPYIVG-RYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLH 301
T+P R+ A+ + GRS + + + L E V L+
Sbjct: 566 KTYPVNTPERWEKIAEAVPGRS-KKDCMKRYKELVEMVKAKKAAQEQVLN 614
>gi|326778851|ref|ZP_08238116.1| YcaO-domain protein [Streptomyces cf. griseus XylebKG-1]
gi|326659184|gb|EGE44030.1| YcaO-domain protein [Streptomyces cf. griseus XylebKG-1]
Length = 777
Score = 40.0 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 19/109 (17%)
Query: 256 PYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNF 315
P R+ V A + GR+ A AL +L +L+ P AV
Sbjct: 659 PSAAPRWAVGAG-LSGRAAAASAL----------RDLLGQAQLAAEDPGEAVDTGDPLVV 707
Query: 316 DLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLD 364
DL PG + +G S + + L L+ + R +
Sbjct: 708 DLAPGAIAVGGGSVAADAAET--------TFDAVLEALRSAGRDALYVP 748
>gi|182438202|ref|YP_001825921.1| hypothetical protein SGR_4409 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178466718|dbj|BAG21238.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 771
Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 19/109 (17%)
Query: 256 PYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNF 315
P R+ V A + GR+ A AL +L +L+ P AV
Sbjct: 653 PSAAPRWAVGAG-LSGRAAAASAL----------RDLLGQAQLAAEDPGEAVDTGDPLVV 701
Query: 316 DLKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSLFLLD 364
DL PG + +G S + + L L+ + R +
Sbjct: 702 DLAPGAIAVGGGSVAADAAET--------TFDAVLEALRSAGRDALYVP 742
>gi|148747833|ref|YP_001285799.1| portal protein [Phormidium phage Pf-WMP3]
gi|146230066|gb|ABQ12474.1| portal protein [Phormidium phage Pf-WMP3]
Length = 651
Score = 39.6 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 84/637 (13%), Positives = 183/637 (28%), Gaps = 124/637 (19%)
Query: 9 IQDRFNYLKNQRGELNYWMEE--------------LTGFLYPYKNNAQL----RMWDTTG 50
++ + + R E L + + ++
Sbjct: 25 VKKEYKRFCDARQVCEETWLEAWGMYLSTPEAQDYLRDQVLRSVGDVNADWRHKITTGKA 84
Query: 51 SEACIKLSSLLSSLITPPGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGF 110
EA + + L S T P + W + + L S+ ++ + G
Sbjct: 85 FEAIETIHAYLMSA-TFPNKNWFDVVPAKPGQDNLL-----VSRLIKRYVQD--KLTEGK 136
Query: 111 RERSRSGFVGCLQSFYTSVVEFGTGC------------FYMEAD-------VDEKGLEEG 151
+ + F+ L SV+ + D +E+ ++
Sbjct: 137 FRAAYANFLRQLLITGNSVLALPWRVETAEVKKKVQVRTPLFEDEPTFEVVSEEREVKSS 196
Query: 152 IRYISVPLSNVYMSVN----HQNVVDSVYREFTFTVDQIVS------KWGDKVLSSKMKS 201
+ + + + + N ++ + R+ T T I++ +G L ++
Sbjct: 197 PDFEVLDMFDCFYDPNVTDPNRG---AFIRKLTKTKADILNLLSEGYYYGVDPL-DVVEH 252
Query: 202 ALARNENERFTII-------------HAVYPKSLTDKKKDKGNKGFHSKFVSVDENRFFE 248
+ + ++ H NK +H V++ N
Sbjct: 253 KCKDTSDTKQDMLSTFQGVTTSLWSPHQNVELLEYWGDIHLENKTYHDVVVTIMGNEVLR 312
Query: 249 EKQIATFPYIVGR------YRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHP 302
PY GR Y A + Y L + LN N+ L++
Sbjct: 313 ---FEQNPYWCGRPFVIGTYIPTARQPYAMGALQPNLGMLHELNIITNQRLDNLELAIDQ 369
Query: 303 PTIAVSEAKQRNFD--LKPGYMNIGALSREGRSLFQPVQFGNPLPYHEELNRLKESIRSL 360
S+ + D +PG + + + + + L Q N ++E + L+ +I
Sbjct: 370 MYTLRSDGLLQPEDVYTEPGKVFLVSDHGDLQPLAN--QSSNFSITYQESSFLESTIDKN 427
Query: 361 FLLDLFQVLDDKASRSAAESMEKTREKGAFVGPL-IGGLQSEF----IGAMISRELDILD 415
F + A+RS G + G+ + ++ + + ++
Sbjct: 428 FGT--GNYVGANAARSGERVTAAEVAAVREAGGNRLSGIHKHIEETSLLVLLEKVMHLVQ 485
Query: 416 SQGNLPEC---EGADNPPVSLLKVEYTSPLFKYQQAESVAS---------ALQGVNTVVE 463
+ P G + +++ L K + + S + +
Sbjct: 486 QFTDQPGMVRVAGDEAGAYEYYELD-VEDLQKEVRLVPIGSDHVIERKQYIEDRLTFIQA 544
Query: 464 LGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQ 523
+ P +D R+ L E E +Q++ Q ++ L
Sbjct: 545 VA---QVPEMGQLVDYKRILVDLLQHWGF--------EEPEAYLKQQDQQAPANPQEALL 593
Query: 524 QQLQQTSQDIGAKAAGRAMEKKLTHD----MMENSYG 556
Q +D+G +A ++ +L D MM YG
Sbjct: 594 SQA----KDVGGQAMSNMLQNQLQADGGTQMMSEMYG 626
>gi|156546841|ref|XP_001606394.1| PREDICTED: hypothetical protein [Nasonia vitripennis]
Length = 886
Score = 39.6 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
Query: 475 DHMDTDRVSRFSLWATNTPAVLIRDTAEV------EDIRQQREVQRRVMEEQHLQQQLQQ 528
D D D + + + IR EV E++R+QRE R E + Q ++
Sbjct: 123 DAPDLDLAADYPAKKQISAPGEIRREYEVQLQMVEEEMRRQREKDRLASEAIIRKIQQEE 182
Query: 529 TSQDIGAKAAGRAMEKKLT 547
Q + A + + K L
Sbjct: 183 EQQKLVQLAQDQLLAKTLA 201
>gi|332023899|gb|EGI64119.1| Guanine nucleotide-binding protein-like 3-like protein [Acromyrmex
echinatior]
Length = 546
Score = 39.2 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 502 EVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMME 552
EVE +++QRE +++ +E +++ +Q ++D +A K+L H ME
Sbjct: 50 EVEAMKKQREEEKQKQKEAARERKREQLAKDGLQGLVKQAENKQLAHKSME 100
>gi|325266040|ref|ZP_08132726.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Kingella
denitrificans ATCC 33394]
gi|324982678|gb|EGC18304.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Kingella
denitrificans ATCC 33394]
Length = 340
Score = 39.2 bits (90), Expect = 1.7, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 43/148 (29%), Gaps = 25/148 (16%)
Query: 410 ELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESV----------------AS 453
+L+ G LP P Y + KYQ A +
Sbjct: 134 VYTLLEEYGALPLPPYIVRPADDNDDARYQTVYAKYQGAVAAPTAGLHFTHEILSALQQK 193
Query: 454 ALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQ 513
++ + +G T P +D++ ++ A V I+ +
Sbjct: 194 GVEFAEVTLHVGAGTFQPVRVDNIAEHKMHSEWFD---------VPEATVAKIQAAKARG 244
Query: 514 RRVMEEQHLQQQLQQTSQDIGAKAAGRA 541
RV + +++ G+ AG+
Sbjct: 245 NRVWSVGTTSLRAIESAARSGSLHAGQG 272
>gi|325171218|ref|YP_004251190.1| hypothetical protein ViPhICP2p19 [Vibrio phage ICP2]
gi|323512244|gb|ADX87701.1| conserved hypothetical protein [Vibrio phage ICP2]
gi|323512316|gb|ADX87772.1| hypothetical protein TU12-16_00090 [Vibrio phage ICP2_2006_A]
Length = 581
Score = 38.9 bits (89), Expect = 2.3, Method: Composition-based stats.
Identities = 78/596 (13%), Positives = 171/596 (28%), Gaps = 112/596 (18%)
Query: 6 AKDIQDRFNYLKNQRGELNYWMEELTGFL------------YPYKNNAQLRMWDTTGSEA 53
A+ I + + +QR E EL ++ P+KN TT +
Sbjct: 20 AEQIANTWQNWNSQRQEWLSQKSELRNYIFATDTTTTTNSTLPWKNK-------TTLPKL 72
Query: 54 CIKLSSLLSSLITP---PGQKWHGLAESFSAYQAFLYKEDARSKKVREWCDQVTDTLFGF 110
C L S P ++W ++ +++A+ ++++ D
Sbjct: 73 CQI-RDNLHSNYISALFPNERWLK-------WEGKSLQDEAKRDAIQQYMDNKVKE---- 120
Query: 111 RERSRSGFVGCLQSFYTSVVEFGTGCFYMEADVDEKGLEEGIRYISVPLSNVYMSVNHQN 170
S F + +++G +E + EE + ++ ++
Sbjct: 121 -----SDFRTIMSQLLLDYIDYGNCFATVEYVKETTKDEESGATRDTYFGPRAVRIDPKD 175
Query: 171 VV-DSVYREFTFTVDQIVSKWGDKVLSSKMKSALARNENERFTIIHAVYPKSLTDKKKDK 229
+V + V +F + I VL+ + +++ E ++ A+ + +
Sbjct: 176 IVFNPVAVDFAHSPKII-----RTVLNEGELLQMEQDQPENASLASAIARRREFRRGLGT 230
Query: 230 GNKG-------------------FHSKFVSV------------------------DENRF 246
+ F S +V V D
Sbjct: 231 YTREDCEKAVGFSMDGFGNLYDYFQSPYVEVLTFYGDYHDTQSGTFKRNMKVTIIDRMFV 290
Query: 247 FEE----KQIATFPYIVGRYRVRADEIYGRSPAMEALPTIRRLNETVNELAQFGRLSLHP 302
EE A P +R+R D +Y P + R++ N A L P
Sbjct: 291 IEEKENPSWFAQAPIFHCGWRIRQDNLYAMGPLDNLVGMQYRIDHLENLKADVFDLIAFP 350
Query: 303 PTIA---VSEAKQRNFDLKPGYMNIGALSREGRSLFQPVQFGNPLPY-HEELNRLKESIR 358
P V E + Y+N Q +Q + ++ + R
Sbjct: 351 PMKVKGDVEEFVWGPMEQI--YINGDGDVEMMAPNTQALQADMQIQILEAKMEEFAGAPR 408
Query: 359 SLFLLDLFQVLDDKASRSAAESMEKTREKGAFVGPLIGGLQSEFIGAMISRELDILDSQG 418
+ ++A E + G I + + +++ L+I
Sbjct: 409 EAM------GIRTPGEKTAFEVQQLQNAAGRIFQEKIMNFEVMLMEKVLNAMLEISRRNL 462
Query: 419 NLPECEGADNPPVSL---LKVEYTSPLFKYQ----QAESVASALQGVNTVVELGVKTGDP 471
++ + + + + V K + A A Q V +++ +
Sbjct: 463 DVADTIRVFDSDDKVATFMNVNKDDITAKGRLRPVGARHFAEQAQVVQSLMGIANTPVWQ 522
Query: 472 SCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREVQRRVMEEQHLQQQLQ 527
H+ T+ +++ + I V + Q + ++++ Q
Sbjct: 523 DIKPHVSTENLAKMLEHNLSLGGWDIFKPN-VAVMEAQTTSALVNQSQAQIEEEAQ 577
>gi|307293763|ref|ZP_07573607.1| integral membrane sensor signal transduction histidine kinase
[Sphingobium chlorophenolicum L-1]
gi|306879914|gb|EFN11131.1| integral membrane sensor signal transduction histidine kinase
[Sphingobium chlorophenolicum L-1]
Length = 451
Score = 38.9 bits (89), Expect = 2.6, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 57/177 (32%), Gaps = 16/177 (9%)
Query: 392 GPLIGGLQSEFIGAMISRELDILDSQG-NLPECEGADNPPVSLLKVEYTSPLF---KYQQ 447
GP + AM SR +L+ + L P++ L+V S + +
Sbjct: 223 GPGDVRQLTMAFNAMRSRIFAMLNEKDRMLGAIGHDLRTPLASLRVRAESVEDEGERARM 282
Query: 448 AESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLW---ATNTPAVL-------- 496
+E++ + + ++ L +D ++ + +P L
Sbjct: 283 SETIDEMNRMLEDILSLARAGRSTEAQQKVDLSALADAVVEDFLELGSPVDLADSERVVA 342
Query: 497 -IRDTAEVEDIRQQREVQRRVMEEQHLQQQLQQTSQDIGAKAAGRAMEKKLTHDMME 552
+R +R E E H+ + + + + G + + +MME
Sbjct: 343 NVRPQQIRRALRNLIENAIVYGERAHVSVERGEGAIRLVVADDGPGISEDRMEEMME 399
>gi|62768239|gb|AAY00027.1| SA1_PKSC [uncultured bacterial symbiont of Discodermia dissoluta]
Length = 3592
Score = 38.5 bits (88), Expect = 2.8, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 34/119 (28%), Gaps = 20/119 (16%)
Query: 392 GPLIGGLQSEFIGAMISRELDILDSQGNLPECEGA--DNPPVSLLKVEYTSPLFKYQQAE 449
P E + +++ REL LP+ D SL+ VE L +
Sbjct: 2545 SPTAAR--EELLVSLLQRELQGALRMHALPDPTVGFFDLGMDSLMAVELRGRLNRA---- 2598
Query: 450 SVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQ 508
+ + + D+ +T ++R P R V R
Sbjct: 2599 ------------FDGDYILSNTAVFDYPNTVELARHIASGLGVPPEDERPRPRVFSQRD 2645
>gi|167534917|ref|XP_001749133.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772286|gb|EDQ85939.1| predicted protein [Monosiga brevicollis MX1]
Length = 802
Score = 38.5 bits (88), Expect = 2.8, Method: Composition-based stats.
Identities = 26/200 (13%), Positives = 57/200 (28%), Gaps = 22/200 (11%)
Query: 277 EALPTIRRLNETVNELAQFGRLSLHPPTIAVSEAKQRNFDLKPGYMNIGALSREGRSLFQ 336
+A+P + + S PP VS+ G +S + ++
Sbjct: 515 KAIPDPDMAQKRRRRSLKAQPQSSLPPLKRVSDVHVE------GTRPWYQISNQDEAVEA 568
Query: 337 PVQFGNPLPYHEELNR---------LKESIRSLFLLDLFQVLDDKASRSAAESMEKTREK 387
Q + L E ++ IR LF++ + ++ E
Sbjct: 569 VDQLISQLAGWGEQTDEERHDVLMLMQRRIRDR----LFEMRQQSPEVT-TAFDDRIEEI 623
Query: 388 GAFVGPLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQ 447
F+ G + + + + ++ ++ P SL V L ++ +
Sbjct: 624 LNFMMQAPGTEEDDRSAEAVQQRFSVVVDAAISGRLAHWESTPASL--VALVILLDQFPR 681
Query: 448 AESVASALQGVNTVVELGVK 467
+ S + V
Sbjct: 682 SIHANSKRMFAGDDMAKAVV 701
>gi|325116269|emb|CBZ51822.1| serine:pyruvate/alanine:glyoxylate aminotransferase [Neospora
caninum Liverpool]
Length = 371
Score = 38.5 bits (88), Expect = 3.3, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 47/134 (35%), Gaps = 14/134 (10%)
Query: 393 PLIGGLQSEFIGAMISRELDILDSQGNLPECEGADNPPVSLLKVEYTSPLFKYQQAESVA 452
P Q E MI L G LP PP + SPL +
Sbjct: 228 PSAVRHQ-ETCVKMIEDYFQALKDTG-LPTDAYGHRPPAEFRYFAFRSPLAQ-------P 278
Query: 453 SALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTAEVEDIRQQREV 512
S Q + + DP + M+ R +LW ++RDT + + +R + +
Sbjct: 279 SHEQFFRQMCVVSADPDDPERVAEMNCVLTDREALWR-----SVLRDTKQAKKLRARLKR 333
Query: 513 QRRVMEEQHLQQQL 526
+V E + +++
Sbjct: 334 TAQVAETREQLRRV 347
>gi|240277638|gb|EER41146.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
Length = 537
Score = 37.7 bits (86), Expect = 5.6, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 4/133 (3%)
Query: 422 ECEGADNPPVSLLKVEYTSPLFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDR 481
+ P+ +V S + ++ S++S+ Q +E+ + + + + D
Sbjct: 284 PIAAVELIPIETPRVSPASV--EAEELRSMSSSRQKRLLKMEIAKLKDEKAILAK-ELDE 340
Query: 482 VSRFSLWATNTPAVLIRDTAEVEDIRQQREV-QRRVMEEQHLQQQLQQTSQDIGAKAAGR 540
T A L + EV + ++ QR V +E+ + +Q Q+ AA
Sbjct: 341 ARTTIKEGGGTDAELEKTREEVRRLTKENASLQRTVQQERSQAEYTRQQYQNASTSAAQS 400
Query: 541 AMEKKLTHDMMEN 553
AME + + + N
Sbjct: 401 AMELQQLEEELAN 413
>gi|148239654|ref|YP_001225041.1| glycyl-tRNA synthetase beta subunit [Synechococcus sp. WH 7803]
gi|147848193|emb|CAK23744.1| Glycyl-tRNA synthetase beta subunit [Synechococcus sp. WH 7803]
Length = 719
Score = 37.3 bits (85), Expect = 7.1, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 27/139 (19%)
Query: 359 SLFLLDLFQVLDDKASRSAA--ESMEKTREKGAFVGPL--IGGLQSEFIGAMISRELDIL 414
F +DL Q + + + E R++ + L G LQ + A++ R L
Sbjct: 558 DGFAIDLVQAVCGEGVSTERLLEDPVDARDRLLLLKTLRESGRLQD--LQAVVQRA-SRL 614
Query: 415 DSQGNLPECEGA----------DNPPVS--LLKVEYTSPLFK-------YQQAESVASAL 455
+G+LP + + D+P + L+++E SPL + Q+ + A AL
Sbjct: 615 AEKGDLPPSKLSVEGIVDAFLFDSPSEAALLVELEALSPLAQAKDYERLAQRLQGAARAL 674
Query: 456 Q-GVNTVVELGVKTGDPSC 473
+ + + V DPS
Sbjct: 675 EAFFDGSDSVMVMAEDPSV 693
>gi|218778476|ref|YP_002429794.1| hypothetical protein Dalk_0621 [Desulfatibacillum alkenivorans
AK-01]
gi|218759860|gb|ACL02326.1| protein of unknown function DUF323 [Desulfatibacillum alkenivorans
AK-01]
Length = 918
Score = 36.9 bits (84), Expect = 9.8, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 36/104 (34%), Gaps = 3/104 (2%)
Query: 442 LFKYQQAESVASALQGVNTVVELGVKTGDPSCMDHMDTDRVSRFSLWATNTPAVLIRDTA 501
L + S+++ Q + L D +D + D + +
Sbjct: 121 LAQTAGNGSLSALDQLAQMMNTLKQILSDEDIIDSNNPDDALSQIHRLLRGISEKLGIDQ 180
Query: 502 EVEDIRQQREVQRRVMEEQHLQQ---QLQQTSQDIGAKAAGRAM 542
EVED R+ V++ E + + A+AAG+A+
Sbjct: 181 EVEDAREGVAVRQAEEGEDAELIASPEADGAGKGGDAEAAGKAL 224
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.308 0.137 0.378
Lambda K H
0.267 0.0425 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,916,318,831
Number of Sequences: 14124377
Number of extensions: 415648651
Number of successful extensions: 2096225
Number of sequences better than 10.0: 2040
Number of HSP's better than 10.0 without gapping: 1243
Number of HSP's successfully gapped in prelim test: 932
Number of HSP's that attempted gapping in prelim test: 2017655
Number of HSP's gapped (non-prelim): 50075
length of query: 556
length of database: 4,842,793,630
effective HSP length: 144
effective length of query: 412
effective length of database: 2,808,883,342
effective search space: 1157259936904
effective search space used: 1157259936904
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 84 (36.9 bits)