HHsearch alignment for GI: 254781215 and conserved domain: COG1110

>COG1110 Reverse gyrase [DNA replication, recombination, and repair].
Probab=97.49  E-value=0.0023  Score=39.82  Aligned_cols=151  Identities=20%  Similarity=0.217  Sum_probs=83.5

Q ss_pred             HHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHH
Q ss_conf             99987070666528866776421455777565557845899999999999874056555421012465025765978999
Q gi|254781215|r   15 LFDLMWSDEIKLSFSNFVLHFFPWGEKGTPLEGFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLN   94 (511)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~   94 (511)
T Consensus        61 ~~~~~~e~e~~~~fF~k~~G~~~ws~----------QR~WakR~~rg----------------~SFaiiAPTGvGKTTfg  114 (1187)
T COG1110          61 FRRYLWEYEEFEEFFKKATGFRPWSA----------QRVWAKRLVRG----------------KSFAIIAPTGVGKTTFG  114 (1187)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCHHH----------HHHHHHHHHCC----------------CCEEEECCCCCCHHHHH
T ss_conf             99999999999999998638986078----------89999998737----------------84489827887654799


Q ss_pred             HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCEEEEEE
Q ss_conf             999999998089966999808589999999999999998550001344432222223334443-2111235786169853
Q gi|254781215|r   95 AWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWLSLLPNKHWFEMQSLSLHPAPWYSDV-LHCSLGIDSKHYSTMC  173 (511)
Q Consensus        95 a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  173 (511)
T Consensus       115 ~~~sl~~a~k--gkr~yii~PT~~Lv~Q~~-~kl~~~~e~~~-----~~~~~~~yh~~l~~~ekee~le~i~~gd-fdIl  185 (1187)
T COG1110         115 LLMSLYLAKK--GKRVYIIVPTTTLVRQVY-ERLKKFAEDAG-----SLDVLVVYHSALPTKEKEEALERIESGD-FDIL  185 (1187)
T ss_pred             HHHHHHHHHC--CCEEEEEECCHHHHHHHH-HHHHHHHHHCC-----CCCEEEEECCCCCHHHHHHHHHHHHCCC-CCEE
T ss_conf             9999998755--874999966789999999-99999886537-----8524665312366577999999986599-6399


Q ss_pred             CCCCCCCCCHHHHCCCCCCEEEEECCH
Q ss_conf             035755610021202676149997111
Q gi|254781215|r  174 RTYSEERPDTFVGHHNTYGMAIINDEA  200 (511)
Q Consensus       174 ~~~s~~~~ea~~G~h~~~~~lvI~DEA  200 (511)
T Consensus       186 itTs~FL~k~~e~L~~~kFdfifVDDV  212 (1187)
T COG1110         186 ITTSQFLSKRFEELSKLKFDFIFVDDV  212 (1187)
T ss_pred             EEEHHHHHHHHHHHCCCCCCEEEECCH
T ss_conf             974787886699840457778998047