HHsearch alignment for GI: 254781215 and conserved domain: COG1200
>COG1200 RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription].
Probab=91.28 E-value=0.99 Score=23.20 Aligned_cols=75 Identities=20% Similarity=0.280 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 58999999999998740565554210124650257659789999999999980899669998085899999999999999
Q gi|254781215|r 52 RSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKW 131 (511)
Q Consensus 52 ~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~ 131 (511)
T Consensus 264 T~aQ~~vi~EI~~Dl~~~~-----~M~R-LlQGDVGSGKTvVA~laml~ai~--~G~Q~ALMAPTEILA~Q-H~~~~~~~ 334 (677)
T COG1200 264 TNAQKRVIKEILADLASPV-----PMNR-LLQGDVGSGKTVVALLAMLAAIE--AGYQAALMAPTEILAEQ-HYESLRKW 334 (677)
T ss_pred CHHHHHHHHHHHHHHCCCH-----HHHH-HHCCCCCCCHHHHHHHHHHHHHH--CCCEEEEECCHHHHHHH-HHHHHHHH
T ss_conf 7899999999986644866-----6678-75267677789999999999987--28816886637999999-99999987
Q ss_pred HHHC
Q ss_conf 9855
Q gi|254781215|r 132 LSLL 135 (511)
Q Consensus 132 ~~~~ 135 (511)
T Consensus 335 l~~~ 338 (677)
T COG1200 335 LEPL 338 (677)
T ss_pred HHHC
T ss_conf 6651