HHsearch alignment for GI: 254781215 and conserved domain: KOG0330
>KOG0330 consensus.
Probab=94.64 E-value=0.11 Score=29.13 Aligned_cols=217 Identities=17% Similarity=0.082 Sum_probs=104.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC-CCEEEEEECCHHHHHHHHH
Q ss_conf 557845899999999999874056555421012465025765978999999999998089-9669998085899999999
Q gi|254781215|r 47 GFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRP-GISVICLANSETQLKTTLW 125 (511)
Q Consensus 47 ~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p-~~kv~vtApt~~Q~~~ilw 125 (511)
T Consensus 80 ~~~~PT~IQ~~aiP~~L~------g------~dvIglAeTGSGKT~afaLPIl~~LL~~p~~~~~lVLtPtRELA~QI-- 145 (476)
T KOG0330 80 GWKKPTKIQSEAIPVALG------G------RDVIGLAETGSGKTGAFALPILQRLLQEPKLFFALVLTPTRELAQQI-- 145 (476)
T ss_pred CCCCCCHHHHHHCCHHHC------C------CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH--
T ss_conf 767874444520655437------9------85799943588840231799999997198774489964828999999--
Q ss_pred HHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC-CCCCCHHHHCCCCCCEEEEECCHHCCC
Q ss_conf 9999999855000134443222222333444321112357861698530357-556100212026761499971110299
Q gi|254781215|r 126 AEVSKWLSLLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYS-EERPDTFVGHHNTYGMAIINDEASGTP 204 (511)
Q Consensus 126 ~Ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~ea~~G~h~~~~~lvI~DEAsgI~ 204 (511)
T Consensus 146 ~e~fe~Lg~~iglr---~~~lv----G-G~~m~~q~~~L~kkPhilVaTPGrL~dhl~~Tkgf~le~lk~LVlDEADrlL 217 (476)
T KOG0330 146 AEQFEALGSGIGLR---VAVLV----G-GMDMMLQANQLSKKPHILVATPGRLWDHLENTKGFSLEQLKFLVLDEADRLL 217 (476)
T ss_pred HHHHHHHCCCCCEE---EEEEE----C-CCHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHHHCHHHHHH
T ss_conf 99998753566727---99986----5-8329999887624898798370789999874368408875787633177662
Q ss_pred HHHH-HHHHHHHCCCCCCEEEEEECCC-CCCCCHHHHHHHCCCCCCEEEEEC--CCCCCCCCHHHHHHHHHHC----CCC
Q ss_conf 7889-8888885079981389982389-987655676530352474179840--4336778977899999751----898
Q gi|254781215|r 205 DVIN-LGILGFLTERNANRFWIMTSNP-RRLSGKFYEIFNKPLDDWKRFQID--TRTVEGIDPSFHEGIIARY----GLD 276 (511)
Q Consensus 205 d~i~-e~i~~~Lt~~g~~~~~i~~~nP-~~~~g~fy~~~~~~~~~w~~~~i~--~~~~p~~~~~~ie~~~~~~----ged 276 (511)
T Consensus 218 d~dF~~~ld~ILk~ip~erqt~LfsATMt~kv---~kL~rasl~~p~~v~~s~ky~t--------v~~lkQ~ylfv~~k~ 286 (476)
T KOG0330 218 DMDFEEELDYILKVIPRERQTFLFSATMTKKV---RKLQRASLDNPVKVAVSSKYQT--------VDHLKQTYLFVPGKD 286 (476)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEEECCHHH---HHHHHHCCCCCEEEECCCHHCC--------HHHHHHHEEECCCCC
T ss_conf 11568999999874674414899986444136---7787641589717860430111--------677664557632666
Q ss_pred HHHHHHHHCCCCCCCCCCEE
Q ss_conf 01354443175666678737
Q gi|254781215|r 277 SDVTRVEVCGQFPQQDIDSF 296 (511)
Q Consensus 277 s~~~r~evlgeFp~~~~~~~ 296 (511)
T Consensus 287 K~~yLV~ll~e~~g~s~iVF 306 (476)
T KOG0330 287 KDTYLVYLLNELAGNSVIVF 306 (476)
T ss_pred CCHHHHHHHHHHCCCCEEEE
T ss_conf 65238998876359847999