HHsearch alignment for GI: 254781215 and conserved domain: PRK04837
>PRK04837 ATP-dependent RNA helicase RhlB; Provisional.
Probab=97.06 E-value=0.0069 Score=36.80 Aligned_cols=74 Identities=18% Similarity=0.079 Sum_probs=52.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC--------CCEEEEEECCH
Q ss_conf 5557845899999999999874056555421012465025765978999999999998089--------96699980858
Q gi|254781215|r 46 EGFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRP--------GISVICLANSE 117 (511)
Q Consensus 46 ~~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p--------~~kv~vtApt~ 117 (511)
T Consensus 27 ~g~~~pTpIQ~~aIP~il~G~------------Dvi~~A~TGSGKTlAfllPil~~ll~~~~~~~~~~~~p~aLIL~PTR 94 (423)
T PRK04837 27 KGFEYCTPIQALALPLTLAGR------------DVAGQAQTGTGKTMAFLTATFHHLLSHPAPEGRKVNQPRALIMAPTR 94 (423)
T ss_pred CCCCCCCHHHHHHHHHHHCCC------------CEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCH
T ss_conf 799999999999999996799------------88998999874999999999999983745334556786189993889
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|254781215|r 118 TQLKTTLWAEVSKWL 132 (511)
Q Consensus 118 ~Q~~~ilw~Ei~k~~ 132 (511)
T Consensus 95 ELa~Qi~-~~~~~l~ 108 (423)
T PRK04837 95 ELAVQIH-ADAEPLA 108 (423)
T ss_pred HHHHHHH-HHHHHHH
T ss_conf 9999999-9999974