HHsearch alignment for GI: 254781215 and conserved domain: PRK06090
>PRK06090 DNA polymerase III subunit delta'; Validated.
Probab=94.44 E-value=0.35 Score=26.09 Aligned_cols=177 Identities=12% Similarity=0.114 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999874056555421012465025765978999999999998089966999808589999999999999998
Q gi|254781215|r 54 WQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWLS 133 (511)
Q Consensus 54 WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~~ 133 (511)
T Consensus 7 Wl~~~~~~l~~~~~~~rl~H-----A~L~~g~~G~Gk~~la~~la~~LlC~~~~~~-~Cg~C~sC~l~---------~~g 71 (319)
T PRK06090 7 WLVPVWQNWKSGLDAERIPG-----ALLLQSDEGLGVESLVELFSHALLCQNYQSE-ACGFCHSCELM---------KSG 71 (319)
T ss_pred CCHHHHHHHHHHHHCCCCCC-----EEEEECCCCCCHHHHHHHHHHHHHCCCCCCC-CCCCCHHHHHH---------HCC
T ss_conf 83799999999998699630-----6766799985799999999999808999999-88778779998---------758
Q ss_pred HCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC-CCCHHHHCCCCCCEEEEECCHHCCCHHHHHHHH
Q ss_conf 5500013444322222233344432111235786169853035755-610021202676149997111029978898888
Q gi|254781215|r 134 LLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEE-RPDTFVGHHNTYGMAIINDEASGTPDVINLGIL 212 (511)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~i~ 212 (511)
T Consensus 72 ~HPD~~~i~pe~~---~k~I~vd~I---------------R~l~~~~~~~~~~---g~~K-V~iI~~ae~m~~~AaNALL 129 (319)
T PRK06090 72 NHPDLHVIKPEKE---GKSITVEQI---------------RQCNRLAQESSQL---GGYR-LFVIEPADAMNESASNALL 129 (319)
T ss_pred CCCCCEEEECCCC---CCCCCHHHH---------------HHHHHHHHHCCCC---CCCE-EEEECCHHHCCHHHHHHHH
T ss_conf 9998236612335---676879999---------------9999997545210---6936-9998144434999999999
Q ss_pred HHHCCCCCCEEEEEE-CCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHH
Q ss_conf 885079981389982-3899876556765303524741798404336778977899999751898013
Q gi|254781215|r 213 GFLTERNANRFWIMT-SNPRRLSGKFYEIFNKPLDDWKRFQIDTRTVEGIDPSFHEGIIARYGLDSDV 279 (511)
Q Consensus 213 ~~Lt~~g~~~~~i~~-~nP~~~~g~fy~~~~~~~~~w~~~~i~~~~~p~~~~~~ie~~~~~~geds~~ 279 (511)
T Consensus 130 KtLEEPp~~t~fiL~t~~~~~ll~TI~SRCq~------------~~l~~p~~~~~~~WL~~q~~~~~~ 185 (319)
T PRK06090 130 KTLEEPAPNCLFLLVTHNQKRLLPTIVSRCQQ------------WVVTPPSTDQAMQWLKGQGISVPA 185 (319)
T ss_pred HHHCCCCCCEEEEEEECCHHHCCCCHHHCCCC------------CCCCCCCHHHHHHHHHHHCCCCHH
T ss_conf 98428998838998768512086418761445------------028995999999999884875579