HHsearch alignment for GI: 254781215 and conserved domain: PRK06647
>PRK06647 DNA polymerase III subunits gamma and tau; Validated.
Probab=96.82 E-value=0.037 Score=32.24 Aligned_cols=149 Identities=15% Similarity=0.055 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE-CCHHHHHHHHHHHHHHHHH
Q ss_conf 999999999987405655542101246502576597899999999999808996699980-8589999999999999998
Q gi|254781215|r 55 QLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLA-NSETQLKTTLWAEVSKWLS 133 (511)
Q Consensus 55 Q~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtA-pt~~Q~~~ilw~Ei~k~~~ 133 (511)
T Consensus 21 Qe~vv~~L~nai~~~rl~H-----AyLFsGprG~GKTt~ArilAk~LnC~~~~~~~PCg~C~sC~~--------i----~ 83 (560)
T PRK06647 21 QDFVVETLKHSIEKNKIAN-----AYIFSGPRGVGKTSSARAFARCLNCVNGPTIMPCGECFSCKS--------I----D 83 (560)
T ss_pred CHHHHHHHHHHHHCCCCCC-----EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH--------H----H
T ss_conf 4999999999997499774-----366328998789999999999965999999888878878888--------7----4
Q ss_pred HCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHHHHHHH
Q ss_conf 55000134443222222333444321112357861698530357556100212026761499971110299788988888
Q gi|254781215|r 134 LLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVINLGILG 213 (511)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~i~~ 213 (511)
T Consensus 84 ~g~~~DviEidaa-----------------s--n~~VddIR~l~--e~v~~~P~~~~yK-V~IIDEahmLt~~A~NALLK 141 (560)
T PRK06647 84 NDSSLDVIEIDGA-----------------S--NTSVQDVRQIK--EEIMFPPASSRYR-VYIIDEVHMLSNSAFNALLK 141 (560)
T ss_pred CCCCCCEEEECCC-----------------C--CCCHHHHHHHH--HHHCCCCCCCCEE-EEEECCHHHCCHHHHHHHHH
T ss_conf 5999875764364-----------------5--48889999999--9863287668706-99964656559999999999
Q ss_pred HHCCCCCCEE-EEEECCCCCCCCHHHHHHH
Q ss_conf 8507998138-9982389987655676530
Q gi|254781215|r 214 FLTERNANRF-WIMTSNPRRLSGKFYEIFN 242 (511)
Q Consensus 214 ~Lt~~g~~~~-~i~~~nP~~~~g~fy~~~~ 242 (511)
T Consensus 142 tLEEPP~~~~FILaTte~~KI~~TI~SRCQ 171 (560)
T PRK06647 142 TIEEPPPYIVFIFATTEVHKLPATIKSRCQ 171 (560)
T ss_pred HHHCCCCCEEEEEECCCHHHCHHHHHHHHE
T ss_conf 863488755999977994768489996510