HHsearch alignment for GI: 254781215 and conserved domain: PRK06674
>PRK06674 DNA polymerase III subunits gamma and tau; Validated.
Probab=96.79 E-value=0.039 Score=32.07 Aligned_cols=150 Identities=14% Similarity=0.110 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999998740565554210124650257659789999999999980899669998085899999999999999985
Q gi|254781215|r 55 QLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWLSL 134 (511)
Q Consensus 55 Q~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~~~ 134 (511)
T Consensus 21 Q~~v~~~L~nai~~~ri~H-----AyLF~GprGtGKts~Ari~AkaLnC~~~~~~~pC~~--C~----~----C~~-i~~ 84 (563)
T PRK06674 21 QEHVTKTLQNALLQEKVSH-----AYLFSGPRGTGKTSIAKVFAKAVNCEHAPVAEPCNE--CP----S----CLG-ITN 84 (563)
T ss_pred HHHHHHHHHHHHHCCCCCC-----EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC--CH----H----HHH-HHC
T ss_conf 0999999999998499650-----343128998689999999999857999999887766--87----8----999-855
Q ss_pred CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHHHHHHHH
Q ss_conf 50001344432222223334443211123578616985303575561002120267614999711102997889888888
Q gi|254781215|r 135 LPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVINLGILGF 214 (511)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~i~~~ 214 (511)
T Consensus 85 g~~~DviEiDa-----------------asn~g--Vd~IR~i~~--~v~~~P~~~~y-KV~IIDeah~Lt~~A~NALLKt 142 (563)
T PRK06674 85 GSISDVLEIDA-----------------ASNNG--VDEIRDIRD--KVKFAPSAVEY-KVYIIDEVHMLSIGAFNALLKT 142 (563)
T ss_pred CCCCCEEEECC-----------------CCCCC--HHHHHHHHH--HHCCCCCCCCE-EEEEEECHHHCCHHHHHHHHHH
T ss_conf 89987798525-----------------55578--799999999--82648867873-7999854563799999999998
Q ss_pred HCCCCCCEE-EEEECCCCCCCCHHHHHHH
Q ss_conf 507998138-9982389987655676530
Q gi|254781215|r 215 LTERNANRF-WIMTSNPRRLSGKFYEIFN 242 (511)
Q Consensus 215 Lt~~g~~~~-~i~~~nP~~~~g~fy~~~~ 242 (511)
T Consensus 143 LEEPP~~viFILaTtep~ki~~TI~SRCQ 171 (563)
T PRK06674 143 LEEPPGHVIFILATTEPHKIPPTIISRCQ 171 (563)
T ss_pred HHCCCCCEEEEEECCCHHHCCHHHHHHHE
T ss_conf 63887564999965994758478873310