HHsearch alignment for GI: 254781215 and conserved domain: PRK06964
>PRK06964 DNA polymerase III subunit delta'; Validated.
Probab=93.14 E-value=0.59 Score=24.61 Aligned_cols=192 Identities=15% Similarity=0.112 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEE-EEEEC-CHHHHHHHHHHHHHHH
Q ss_conf 999999999998740565554210124650257659789999999999980899669-99808-5899999999999999
Q gi|254781215|r 54 WQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISV-ICLAN-SETQLKTTLWAEVSKW 131 (511)
Q Consensus 54 WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv-~vtAp-t~~Q~~~ilw~Ei~k~ 131 (511)
T Consensus 5 W~~~~w~~l~~~--~~---rl~H--A~Lf~Gp~G~Gk~~lA~~~A~~llC~~~~~~~~~Cg~C~sC~~~~~--------- 68 (342)
T PRK06964 5 WQTDDWNRLQAL--RA---RWPH--ALLLHGQAGIGKLAFAQHLAQGLLCETPQPNGEPCGTCAACTWFAQ--------- 68 (342)
T ss_pred CCHHHHHHHHHC--CC---CHHE--EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC---------
T ss_conf 556999999980--68---7130--5765799986799999999999838999988897867777888862---------
Q ss_pred HHHCHHCCCCCCCCCCCCCCCCCCCCCCCCC-----CCC--CC-EEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCC
Q ss_conf 9855000134443222222333444321112-----357--86-169853035755610021202676149997111029
Q gi|254781215|r 132 LSLLPNKHWFEMQSLSLHPAPWYSDVLHCSL-----GID--SK-HYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGT 203 (511)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~-~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI 203 (511)
T Consensus 69 -~~HPD~~~i~Pe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~idqiR~l~--~~l~~~~~~g~~k-VviI~~Ae~m 144 (342)
T PRK06964 69 -GNHPDYRIVRPEALAAEAPGAADDAKAADADEGGKKTRAPSKEIKIEQVRALL--DFCGVGSHRGGAR-VVVLYPAEAL 144 (342)
T ss_pred -CCCCCEEEECCCHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH--HHHHHCCCCCCCE-EEEECCHHHH
T ss_conf -79997455340021022333210010111222101235655645499999999--9970075458844-9998277873
Q ss_pred CHHHHHHHHHHHCCCCCCEEEEE-ECCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCH
Q ss_conf 97889888888507998138998-238998765567653035247417984043367789778999997518980
Q gi|254781215|r 204 PDVINLGILGFLTERNANRFWIM-TSNPRRLSGKFYEIFNKPLDDWKRFQIDTRTVEGIDPSFHEGIIARYGLDS 277 (511)
Q Consensus 204 ~d~i~e~i~~~Lt~~g~~~~~i~-~~nP~~~~g~fy~~~~~~~~~w~~~~i~~~~~p~~~~~~ie~~~~~~geds 277 (511)
T Consensus 145 n~~aaNalLK~LEEPp~~~~~iL~~~~~~~llpTI~SRcq~---------~~---~~~~~~~~~~~~L~~~~v~~ 207 (342)
T PRK06964 145 NVAAANALLKTLEEPPPGVVFLLVSARIDRLLPTILSRCRQ---------WP---MTVPAPEAAAAWLAAQGVAD 207 (342)
T ss_pred CHHHHHHHHHHHCCCCCCEEEEEEECCHHHCCHHHHHCCEE---------EC---CCCCCHHHHHHHHHHCCCCC
T ss_conf 89999999997237987848999869925483688767643---------02---89959999999998739863